Identification of QTLs influencing agronomic traits in Miscanthus sinensis Anderss. I. Total height, flag-leaf height and stem diameter

NARCIS (Netherlands)

Atienza, S.G.; Satovic, Z.; Petersen, K.K.; Dolstra, O.; Martin, A.

2003-01-01

We have developed the first quantitative trait locus (QTL) analyses for agronomic traits in a cross between F1.1 (P1) and F1.7 (P7) entries of Miscanthus sinensis Anderss. Both lines are offspring of the cross between MS-90-2 and MS-88-110. A map based on random amplified polymorphic DNA markers

Genetic divergence in sesame based on morphological and agronomic traits

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Nair Helena Castro Arriel

2007-01-01

Full Text Available The evaluation of diversity in germplasm collections is important for both plant breeders and germplasmcurators to optimize the use of the variability available. Diversity can be estimated by different genetic markers. The purposeof this study was to estimate the genetic divergence of 30 morphological and agronomic traits in 108 sesame genotypes bymultivariate analysis. The Cole-Rodgers index was used to establish the dissimilarity matrices. The principal componentanalysis identified the traits that contributed most to the divergence and the genotypes were clustered by Tocher’s optimization.Despite the narrow genetic basis, the markers were efficient to characterize the genotypes and identify the most similar groupsor duplicate and divergent genotypes. Greatest variation was found for the traits number of capsules per plant and grain yield.

Mapping QTLs Controlling Flowering Time and Important Agronomic Traits in Pearl Millet.

Science.gov (United States)

Kumar, Sushil; Hash, C Tom; Nepolean, T; Satyavathi, C Tara; Singh, Govind; Mahendrakar, Mahesh D; Yadav, Rattan S; Srivastava, Rakesh K

2017-01-01

Pearl millet [ Pennisetum glaucum (L.) R. Br.] is a staple crop for the people of arid and semi-arid regions of the world. It is fast gaining importance as a climate resilient nutricereal. Exploiting the bold seeded, semi-dwarf, and early flowering genotypes in pearl millet is a key breeding strategy to enhance yield, adaptability, and for adequate food in resource-poor zones. Genetic variation for agronomic traits of pearl millet inbreds can be used to dissect complex traits through quantitative trait locus (QTL) mapping. This study was undertaken to map a set of agronomically important traits like flowering time (FT), plant height (PH), panicle length (PL), and grain weight (self and open-pollinated seeds) in the recombinant inbred line (RIL) population of ICMB 841-P3 × 863B-P2 cross. Excluding grain weight (open pollinated), heritabilities for FT, PH, PL, grain weight (selfed) were in high to medium range. A total of six QTLs for FT were detected on five chromosomes, 13 QTLs for PH on six chromosomes, 11 QTLs for PL on five chromosomes, and 14 QTLs for 1,000-grain weight (TGW) spanning five chromosomes. One major QTL on LG3 was common for FT and PH. Three major QTLs for PL, one each on LG1, LG2, and LG6B were detected. The large effect QTL for TGW (self) on LG6B had a phenotypic variance ( R 2 ) of 62.1%. The R 2 for FT, TGW (self), and PL ranged from 22.3 to 59.4%. A total of 21 digenic interactions were discovered for FT ( R 2 = 18-40%) and PL ( R 2 = 13-19%). The epistatic effects did not reveal any significant QTL × QTL × environment (QQE) interactions. The mapped QTLs for flowering time and other agronomic traits in present experiment can be used for marker-assisted selection (MAS) and genomic selection (GS) breeding programs.

Genome-Wide Association Study of Major Agronomic Traits Related to Domestication in Peanut

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Xingguo Zhang

2017-09-01

Full Text Available Peanut (Arachis hypogaea consists of two subspecies, hypogaea and fastigiata, and has been cultivated worldwide for hundreds of years. Here, 158 peanut accessions were selected to dissect the molecular footprint of agronomic traits related to domestication using specific-locus amplified fragment sequencing (SLAF-seq method. Then, a total of 17,338 high-quality single nucleotide polymorphisms (SNPs in the whole peanut genome were revealed. Eleven agronomic traits in 158 peanut accessions were subsequently analyzed using genome-wide association studies (GWAS. Candidate genes responsible for corresponding traits were then analyzed in genomic regions surrounding the peak SNPs, and 1,429 genes were found within 200 kb windows centerd on GWAS-identified peak SNPs related to domestication. Highly differentiated genomic regions were observed between hypogaea and fastigiata accessions using FST values and sequence diversity (π ratios. Among the 1,429 genes, 662 were located on chromosome A3, suggesting the presence of major selective sweeps caused by artificial selection during long domestication. These findings provide a promising insight into the complicated genetic architecture of domestication-related traits in peanut, and reveal whole-genome SNP markers of beneficial candidate genes for marker-assisted selection (MAS in future breeding programs.

QTL mapping for yield components and agronomic traits in a Brazilian soybean population

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Josiane Isabela da Silva Rodrigues

2016-11-01

Full Text Available The objective of this work was to map QTL for agronomic traits in a Brazilian soybean population. For this, 207 F2:3 progenies from the cross CS3035PTA276-1-5-2x UFVS2012 were genotyped and cultivated in Viçosa-MG, using randomized block design with three replications. QTL detection was carried out by linear regression and composite interval mapping. Thirty molecular markers linked to QTL were detected by linear regression for the total of nine agronomic traits. QTL for SWP (seed weight per plant, W100S (weight of 100 seeds, NPP (number of pods per plant, and NSP (number of seeds per plant were detected by composite interval mapping. Four QTL with additive effect are promising for marker-assisted selection (MAS. Particularly, the markers Satt155 and Satt300 could be useful in simultaneous selection for greater SWP, NPP, and NSP.

A Chromosome Segment Substitution Library of Weedy Rice for Genetic Dissection of Complex Agronomic and Domestication Traits.

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Prasanta K Subudhi

Full Text Available Chromosome segment substitution lines (CSSLs are a powerful alternative for locating quantitative trait loci (QTL, analyzing gene interactions, and providing starting materials for map-based cloning projects. We report the development and characterization of a CSSL library of a U.S. weedy rice accession 'PSRR-1' with genome-wide coverage in an adapted rice cultivar 'Bengal' background. The majority of the CSSLs carried a single defined weedy rice segment with an average introgression segment of 2.8 % of the donor genome. QTL mapping results for several agronomic and domestication traits from the CSSL population were compared with those obtained from two recombinant inbred line (RIL populations involving the same weedy rice accession. There was congruence of major effect QTLs between both types of populations, but new and additional QTLs were detected in the CSSL population. Although, three major effect QTLs for plant height were detected on chromosomes 1, 4, and 8 in the CSSL population, the latter two escaped detection in both RIL populations. Since this was observed for many traits, epistasis may play a major role for the phenotypic variation observed in weedy rice. High levels of shattering and seed dormancy in weedy rice might result from an accumulation of many small effect QTLs. Several CSSLs with desirable agronomic traits (e.g. longer panicles, longer grains, and higher seed weight identified in this study could be useful for rice breeding. Since weedy rice is a reservoir of genes for many weedy and agronomic attributes, the CSSL library will serve as a valuable resource to discover latent genetic diversity for improving crop productivity and understanding the plant domestication process through cloning and characterization of the underlying genes.

A high-density genetic map and QTL analysis of agronomic traits in foxtail millet [Setaria italica (L.) P. Beauv.] using RAD-seq.

Science.gov (United States)

Wang, Jun; Wang, Zhilan; Du, Xiaofen; Yang, Huiqing; Han, Fang; Han, Yuanhuai; Yuan, Feng; Zhang, Linyi; Peng, Shuzhong; Guo, Erhu

2017-01-01

Foxtail millet (Setaria italica), a very important grain crop in China, has become a new model plant for cereal crops and biofuel grasses. Although its reference genome sequence was released recently, quantitative trait loci (QTLs) controlling complex agronomic traits remains limited. The development of massively parallel genotyping methods and next-generation sequencing technologies provides an excellent opportunity for developing single-nucleotide polymorphisms (SNPs) for linkage map construction and QTL analysis of complex quantitative traits. In this study, a high-throughput and cost-effective RAD-seq approach was employed to generate a high-density genetic map for foxtail millet. A total of 2,668,587 SNP loci were detected according to the reference genome sequence; meanwhile, 9,968 SNP markers were used to genotype 124 F2 progenies derived from the cross between Hongmiaozhangu and Changnong35; a high-density genetic map spanning 1648.8 cM, with an average distance of 0.17 cM between adjacent markers was constructed; 11 major QTLs for eight agronomic traits were identified; five co-dominant DNA markers were developed. These findings will be of value for the identification of candidate genes and marker-assisted selection in foxtail millet.

Organic and Inorganic Nitrogen Fertilization Effects on Some Physiological and Agronomical Traits of Chickpea (Cicer arietinum L. in Irrigated Condition

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Ali Namvar

2013-09-01

Full Text Available The effects of organic and inorganic nitrogen fertilization on some physiological and agronomical traits of chickpea (Cicer arietinum L. cv. ILC 482, investigated at the Experimental Farm of the Agriculture Faculty, University of Mohaghegh Ardabili. The trial was laid out in spilt plot design based on randomized complete block with four replications. Experimental factors were mineral nitrogen fertilizer at four levels (0, 50, 75 and 100 kg urea/ha in the main plots, and two levels of inoculation with Rhizobium bacteria (with and without inoculation as sub plots. N application and Rh. inoculation showed positive effects on physiological and agronomical traits of chickpea. The highest value of leaf RWC recorded in 50 kg urea/ha that was statistically in par with 75 kg urea/ha application while, usage of 75 kg urea/ha showed the maximum stem RWC. The maximum CMS obtained form application of 75 kg urea/ha. Chlorophyll content, leaf area index and grains protein content showed their maximum values in the highest level of nitrogen usage (100 kg urea/ha. Moreover, inoculated plants had the highest magnitudes of all physiological traits. In the case of agronomical traits, the highest values of plant height, number of primary and secondary branches, number of pods per plant, number of grains per plant, grain and biological yield were obtained from the highest level of nitrogen fertilizer (100 kg urea/ha and Rh. inoculation. Application of 75 kg urea/ha was statistically in par with 100 kg urea/ha in all of these traits. The results pointed out that some N fertilization (i.e. between 50 and 75 kg urea/ha as starter can be beneficial to improve growth, development, physiological traits and total yield of inoculated chickpea.

Identification of QTLs for 14 Agronomically Important Traits in Setaria italica Based on SNPs Generated from High-Throughput Sequencing

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Kai Zhang

2017-05-01

Full Text Available Foxtail millet (Setaria italica is an important crop possessing C4 photosynthesis capability. The S. italica genome was de novo sequenced in 2012, but the sequence lacked high-density genetic maps with agronomic and yield trait linkages. In the present study, we resequenced a foxtail millet population of 439 recombinant inbred lines (RILs and developed high-resolution bin map and high-density SNP markers, which could provide an effective approach for gene identification. A total of 59 QTL for 14 agronomic traits in plants grown under long- and short-day photoperiods were identified. The phenotypic variation explained ranged from 4.9 to 43.94%. In addition, we suggested that there may be segregation distortion on chromosome 6 that is significantly distorted toward Zhang gu. The newly identified QTL will provide a platform for sequence-based research on the S. italica genome, and for molecular marker-assisted breeding.

Estimation of genetic variability and heritability of wheat agronomic traits resulted from some gamma rays irradiation techniques

International Nuclear Information System (INIS)

Wijaya Murti Indriatama; Trikoesoemaningtyas; Syarifah Iis Aisyah; Soeranto Human

2016-01-01

Gamma irradiation techniques have significant effect on frequency and spectrum of macro-mutation but the study of its effect on micro-mutation that related to genetic variability on mutated population is very limited. The aim of this research was to study the effect of gamma irradiation techniques on genetic variability and heritability of wheat agronomic characters at M2 generation. This research was conducted from July to November 2014, at Cibadak experimental station, Indonesian Center for Agricultural Biotechnology and Genetic Resources Research and Development, Ministry of Agriculture. Three introduced wheat breeding lines (F-44, Kiran-95 & WL-711) were treated by 3 gamma irradiation techniques (acute, fractionated and intermittent). M1 generation of combination treatments were planted and harvested its spike individually per plants. As M2 generation, seeds of 75 M1 spike were planted at the field with one row one spike method and evaluated on the agronomic characters and its genetic components. The used of gamma irradiation techniques decreased mean but increased range values of agronomic traits in M2 populations. Fractionated irradiation induced higher mean and wider range on spike length and number of spike let per spike than other irradiation techniques. Fractionated and intermittent irradiation resulted greater variability of grain weight per plant than acute irradiation. The number of tillers, spike weight, grain weight per spike and grain weight per plant on M2 population resulted from induction of three gamma irradiation techniques have high estimated heritability and broad sense of genetic variability coefficient values. The three gamma irradiation techniques increased genetic variability of agronomic traits on M2 populations, except plant height. (author)

Main agronomic traits and resistance to rice blast of space-induced mutant lines of Zhong-er-ruan-zhan

International Nuclear Information System (INIS)

Xiao Wuming; Wang Hui; Liu Yongzhu; Guo Tao; Chen Zhiqiang; Yang Qiyun; Zhu Xiaoyuan

2012-01-01

The main agronomic traits and resistance to rice blast of 34 space-induced lines from an elite rice cultivar, Zhong-er-ruan-zhan were evaluated at their SP 4 . The resistance to blast of the mutant lines had been tested by two blast isolates previously. It was found that the mutant lines showed significant difference in plant height, effective panicles, panicle length and grains per panicle etc. from their parent. The range of variation in 1000-grain weight the largest, followed by the seed-setting rate, and that of effective panicles was the least among all the traits. Except for the line Z34, 33 mutant lines had broader resistance spectra than the wild-type based on the test with 38 different blast isolates, and all the 33 lines were also resistant to the panicle blast in the field. The result confirmed that selection for resistant to blast in lower generations was reliable. Taking account of agronomic traits and blast resistance, promising lines with resistance to blast and good agronomic characters could be selected from those mutant lines. Therefore, the elite rice germplasm with enhanced disease resistance can be produced. (authors)

Determining the most important physiological and agronomic traits contributing to maize grain yield through machine learning algorithms: a new avenue in intelligent agriculture.

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Avat Shekoofa

Full Text Available Prediction is an attempt to accurately forecast the outcome of a specific situation while using input information obtained from a set of variables that potentially describe the situation. They can be used to project physiological and agronomic processes; regarding this fact, agronomic traits such as yield can be affected by a large number of variables. In this study, we analyzed a large number of physiological and agronomic traits by screening, clustering, and decision tree models to select the most relevant factors for the prospect of accurately increasing maize grain yield. Decision tree models (with nearly the same performance evaluation were the most useful tools in understanding the underlying relationships in physiological and agronomic features for selecting the most important and relevant traits (sowing date-location, kernel number per ear, maximum water content, kernel weight, and season duration corresponding to the maize grain yield. In particular, decision tree generated by C&RT algorithm was the best model for yield prediction based on physiological and agronomical traits which can be extensively employed in future breeding programs. No significant differences in the decision tree models were found when feature selection filtering on data were used, but positive feature selection effect observed in clustering models. Finally, the results showed that the proposed model techniques are useful tools for crop physiologists to search through large datasets seeking patterns for the physiological and agronomic factors, and may assist the selection of the most important traits for the individual site and field. In particular, decision tree models are method of choice with the capability of illustrating different pathways of yield increase in breeding programs, governed by their hierarchy structure of feature ranking as well as pattern discovery via various combinations of features.

Identification of QTLs for 14 Agronomically Important Traits in Setaria italica Based on SNPs Generated from High-Throughput Sequencing.

Science.gov (United States)

Zhang, Kai; Fan, Guangyu; Zhang, Xinxin; Zhao, Fang; Wei, Wei; Du, Guohua; Feng, Xiaolei; Wang, Xiaoming; Wang, Feng; Song, Guoliang; Zou, Hongfeng; Zhang, Xiaolei; Li, Shuangdong; Ni, Xuemei; Zhang, Gengyun; Zhao, Zhihai

2017-05-05

Foxtail millet ( Setaria italica ) is an important crop possessing C4 photosynthesis capability. The S. italica genome was de novo sequenced in 2012, but the sequence lacked high-density genetic maps with agronomic and yield trait linkages. In the present study, we resequenced a foxtail millet population of 439 recombinant inbred lines (RILs) and developed high-resolution bin map and high-density SNP markers, which could provide an effective approach for gene identification. A total of 59 QTL for 14 agronomic traits in plants grown under long- and short-day photoperiods were identified. The phenotypic variation explained ranged from 4.9 to 43.94%. In addition, we suggested that there may be segregation distortion on chromosome 6 that is significantly distorted toward Zhang gu. The newly identified QTL will provide a platform for sequence-based research on the S. italica genome, and for molecular marker-assisted breeding. Copyright © 2017 Zhang et al.

The influence of stages of maturity on the agronomic traits of fibre flax introduced varieties

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Jasminka Butorac

2018-03-01

Full Text Available The harvest time of fibre flax is influenced by climatic conditions, varieties, stages of maturity and the crop’s final use. In addition, the time of harvesting of fibre flax affects the quality of the fibres. Fibre flax can be harvested in few stages of maturity. So, this paper presents the influence of three stages of maturity (green, yellow and full ripening on the agronomic traits (stem yield, stem yield after retting, total fibre yield, share of total fibre, long fibre yield, share of long fibre of five fibre flax varieties. Varieties trials with fibre flax were set up in two years (2010-2011 and in two locations: at the experimental fields of the Faculty of Agriculture in Zagreb on eutric cambisol and of the College of Agriculture at Križevci on pseudogley on level terrain. The trials were carried out according to the randomized complete block design (RCBD with four replications. According to the results of the two-years research into the agronomic traits of fibre flax, significant differences were established among the varieties and among the stages of maturity under study. The varieties Agatha, Viola and Electra recorded higher values of investigated traits. All varieties achieved higher values of investigated traits at Križevci (production on heavier soil in which some of winter moisture remained available in spring months. The highest values of investigated traits were recorded when the fibre flax were harvested in the green ripening.

Enhancing Brassinosteroid Signaling via Overexpression of Tomato (Solanum lycopersicum SlBRI1 Improves Major Agronomic Traits

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Shuming Nie

2017-08-01

Full Text Available Brassinosteroids (BRs play important roles in plant growth, development, and stress responses through the receptor, Brassinosteroid-insensitive 1 (BRI1, which perceives BRs and initiates BR signaling. There is considerable potential agricultural value in regulating BR signaling in crops. In this study, we investigated the effects of overexpressing the tomato (Solanum lycopersicum BRI1 gene, SlBRI1, on major agronomic traits, such as seed germination, vegetative growth, fruit ethylene production, carotenoid accumulation, yield, and quality attributes. SlBRI1 overexpression enhanced the endogenous BR signaling intensity thereby increasing the seed germination rate, lateral root number, hypocotyl length, CO2 assimilation, plant height, and flower size. The transgenic plants also showed an increase in fruit yield and fruit number per plant, although the mean weight of individual fruit was reduced, compared with wild type. SlBRI1 overexpression also promoted fruit ripening and ethylene production, and caused an increase in levels of carotenoids, ascorbic acid, soluble solids, and soluble sugars during fruit ripening. An increased BR signaling intensity mediated by SlBRI1 overexpression was therefore positively correlated with carotenoid accumulation and fruit nutritional quality. Our results indicate that enhancing BR signaling by overexpression of SlBRI1 in tomato has the potential to improve multiple major agronomic traits.

Variation in the agronomic and morphological traits in spring barley

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N. Dyulgerov

2017-12-01

Full Text Available Abstract. The study was conducted to examine the variation in the agronomic and morphological traits in spring barley. For this purpose, 22 lines from the ICARDA High Input Barley Program for favorable environment and 3 check varieties (Rihane-03, VMorales and Veslets were tested in an alpha-lattice design with two replications at the Institute of Agriculture – Karnobat, Bulgaria in 2014 and 2015 growing season. The traits days to heading, plant height, number of tillers per plant, flag leaf length, flag leaf width, spike length, awn length, peduncle length, spikelet number per spike, grain number per spike, grain weight per spike, 1000 grains weight, grain yield, powdery mildew (Erysiphe graminis f. sp. hordei, net blotch (Pyrenophora teres f. teres and stripe rust (Puccinia striiformis f. sp. hordei infection were studied. Significant differences between lines for all studied traits were found. The number of fertile tillers per plant was significantly positively correlated with grain yield. Lines expressed higher grain yields, shorter stem, better tolerance to net blotch and stripe rust than Bulgarian check variety Veslets were identified. These genotypes can, therefore, be used as parents for the improvement of spring barley.

Path Analysis of Grain Yield and Yield Components and Some Agronomic Traits in Bread Wheat

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Mohsen Janmohammadi

2014-01-01

Full Text Available Development of new bread wheat cultivars needs efficient tools to monitor trait association in a breeding program. This investigation was aimed to characterize grain yield components and some agronomic traits related to bread wheat grain yield. The efficiency of a breeding program depends mainly on the direction of the correlation between different traits and the relative importance of each component involved in contributing to grain yield. Correlation and path analysis were carried out in 56 bread wheat genotypes grown under field conditions of Maragheh, Iran. Observations were recorded on 18 wheat traits and correlation coefficient analysis revealed grain yield was positively correlated with stem diameter, spike length, floret number, spikelet number, grain diameter, grain length and 1000 seed weight traits. According to the variance inflation factor (VIF and tolerance as multicollinearity statistics, there are inconsistent relationships among the variables and all traits could be considered as first-order variables (Model I with grain yield as the response variable due to low multicollinearity of all measured traits. In the path coefficient analysis, grain yield represented the dependent variable and the spikelet number and 1000 seed weight traits were the independent ones. Our results indicated that the number of spikelets per spikes and leaf width and 1000 seed weight traits followed by the grain length, grain diameter and grain number per spike were the traits related to higher grain yield. The above mentioned traits along with their indirect causal factors should be considered simultaneously as an effective selection criteria evolving high yielding genotype because of their direct positive contribution to grain yield.

Genome-wide association studies dissect the genetic networks underlying agronomical traits in soybean.

Science.gov (United States)

Fang, Chao; Ma, Yanming; Wu, Shiwen; Liu, Zhi; Wang, Zheng; Yang, Rui; Hu, Guanghui; Zhou, Zhengkui; Yu, Hong; Zhang, Min; Pan, Yi; Zhou, Guoan; Ren, Haixiang; Du, Weiguang; Yan, Hongrui; Wang, Yanping; Han, Dezhi; Shen, Yanting; Liu, Shulin; Liu, Tengfei; Zhang, Jixiang; Qin, Hao; Yuan, Jia; Yuan, Xiaohui; Kong, Fanjiang; Liu, Baohui; Li, Jiayang; Zhang, Zhiwu; Wang, Guodong; Zhu, Baoge; Tian, Zhixi

2017-08-24

Soybean (Glycine max [L.] Merr.) is one of the most important oil and protein crops. Ever-increasing soybean consumption necessitates the improvement of varieties for more efficient production. However, both correlations among different traits and genetic interactions among genes that affect a single trait pose a challenge to soybean breeding. To understand the genetic networks underlying phenotypic correlations, we collected 809 soybean accessions worldwide and phenotyped them for two years at three locations for 84 agronomic traits. Genome-wide association studies identified 245 significant genetic loci, among which 95 genetically interacted with other loci. We determined that 14 oil synthesis-related genes are responsible for fatty acid accumulation in soybean and function in line with an additive model. Network analyses demonstrated that 51 traits could be linked through the linkage disequilibrium of 115 associated loci and these links reflect phenotypic correlations. We revealed that 23 loci, including the known Dt1, E2, E1, Ln, Dt2, Fan, and Fap loci, as well as 16 undefined associated loci, have pleiotropic effects on different traits. This study provides insights into the genetic correlation among complex traits and will facilitate future soybean functional studies and breeding through molecular design.

Correlation and path analysis of agronomic and morphological traits in maize

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Tallyta Nayara Silva

2016-06-01

Full Text Available ABSTRACT The efficiency of selection can be broadened for certain traits using estimative of genetic parameters, which are fundamental for plant breeding. The estimative of genetic parameters allows identifying the nature of the action of genes involved in the control of quantitative traits and evaluates the efficiency of different breeding strategies to obtain genetic gains. Therefore, this study aimed to verify the variability and correlation between morphological and agronomic traits in synthetic maize populations, in order to practice indirect selection. Thirteen populations were evaluated in field experiments at Jaboticabal- SP and Campo Alegre de Goiás-GO, using randomized block design, for lodging (LOD, culm breakage (CB, plant height (PH, ear height (EH and grain yield (GY. The 13 populations were also sown in 1 kg-plastic bags under black shade cloth, using a randomized complete block design with nine replications, for evaluation of the morphological traits: main root length (MRL, root fresh matter (RFM, root dry matter (RDM, average root diameter (ARD, root surface area (RSA, root tissue density (RTD and shoots dry matter (SDM. The trait GY exhibited genetic variability enough to be effective if used for selection. The selection on the morphological traits is indicated on RDM, due to the ease in obtaining data and its accuracy, high correlation with all morphological traits and association with GY. The simultaneous selection based on RFM and RDM, for gains in GY, can be performed. The highest direct effect on GY was identified in LOD and CB, being indicated for indirect selection.

Variation of several agronomic and biochemical traits in γ-ray induced mutant soybeans

International Nuclear Information System (INIS)

Shim, Kyo Moon; Kim, Sun Hyung; Kim, Nam Soo; Son, Hi Sup; Rhee, Hae Ik

1996-01-01

Two soybean cultivars(Paldalkong and Bangsakong) were irradiated with gamma-ray to reduce seed size, which is an important trait for soybean sprout and the derived mutant soybeans were analyzed in several agronomic and biochemical traits. There were high levels of variations in quantitative traits among the mutants. Several mutant lines showed higher yield and smaller seed than their parents. Qualitative traits such as seed coat color or pubescent color were also changed in a few lines. Biochemical variations were also observed among the mutants. In seed storage protein analysis, many mutant lines showed reduced intensities in β-subunits in 7S globulin than their parents and an additional band in the acidic subunit at 31KDa. Two mutant lines derived from Paldalkong showed an additional band and a shifted band of protease inhibitor by electrophoretic analysis. Variations in isozymes and RAPD were also observed among the mutants. Six isozymes(Adh, Est, Gdh, Idh, Mdh and Pgm) among eleven isozymes showed some variations and six out of ten primers showed polymorphic amplified DNA fragments among the mutants. (author)

Correlation, path analysis and heritability estimation for agronomic traits contribute to yield on soybean

Science.gov (United States)

Sulistyo, A.; Purwantoro; Sari, K. P.

2018-01-01

Selection is a routine activity in plant breeding programs that must be done by plant breeders in obtaining superior plant genotypes. The use of appropriate selection criteria will determine the effectiveness of selection activities. The purpose of this study was to analysis the inheritable agronomic traits that contribute to soybean yield. A total of 91 soybean lines were planted in Muneng Experimental Station, Probolinggo District, East Java Province, Indonesia in 2016. All soybean lines were arranged in randomized complete block design with two replicates. Correlation analysis, path analysis and heritability estimation were performed on days to flowering, days to maturing, plant height, number of branches, number of fertile nodes, number of filled pods, weight of 100 seeds, and yield to determine selection criteria on soybean breeding program. The results showed that the heritability value of almost all agronomic traits observed is high except for the number of fertile nodes with low heritability. The result of correlation analysis shows that days to flowering, plant height and number of fertile nodes have positive correlation with seed yield per plot (0.056, 0.444, and 0.100, respectively). In addition, path analysis showed that plant height and number of fertile nodes have highest positive direct effect on soybean yield. Based on this result, plant height can be selected as one of selection criteria in soybean breeding program to obtain high yielding soybean variety.

Genetic study of various agronomic traits in cotton (Gossypium hirsutum L.)

International Nuclear Information System (INIS)

Ashraf, F.; Khan, I.A.; Ahmed, S.

2009-01-01

The use of already existing genetic variability in the breeding material, as well as, the creation of new variability along with the genetic understanding of various agronomic traits is of crucial importance, in order to develop potential sources of cotton. For this purpose, 5 X 6 complete diallel cross experiment was conducted during 2003-04, involving 5 strains i.e. VH-55, MNH-516, ACALA-SJ-4, A-8100 and CRIS-420, to evaluate gene-action, general and specific combining ability for number of sympodial branches, number of monopodial branches, plant height, number of bolls per plant, boll weight and yield of seed cotton. Additive type of gene action, with partial dominance for all the traits studied, was observed. Most dominant genes for boll weight, yield of seed-cotton, and number of sympodial branches were observed in CRIS-420, while maximum dominant genes for number of monopodial branches, plant height were observed in ACALA-SJ-4. Variety VH-55 carried maximum dominant genes for number of bolls per plant. Recessive genes for the number of sympodial branches, number of monopodial branches, plant height, number of bolls per plant and yield of seed-cotton, were exhibited by MNH-516. The variety ACAU-SJ-4 showed harmonius combination for bolls per plant and yield of seed-cotton, whereas CRIS- 420 was found a good general combiner for plant height and number of sympodial branches. (author)

SNP Marker Integration and QTL Analysis of 12 Agronomic and Morphological Traits in F8 RILs of Pepper (Capsicum annuum L.)

Science.gov (United States)

Lu, Fu-Hao; Kwon, Soon-Wook; Yoon, Min-Young; Kim, Ki-Taek; Cho, Myeong-Cheoul; Yoon, Moo-Kyung; Park, Yong-Jin

2012-01-01

Red pepper, Capsicum annuum L., has been attracting geneticists’ and breeders’ attention as one of the important agronomic crops. This study was to integrate 41 SNP markers newly developed from comparative transcriptomes into a previous linkage map, and map 12 agronomic and morphological traits into the integrated map. A total of 39 markers found precise position and were assigned to 13 linkage groups (LGs) as well as the unassigned LGe, leading to total 458 molecular markers present in this genetic map. Linkage mapping was supported by the physical mapping to tomato and potato genomes using BLAST retrieving, revealing at least two-thirds of the markers mapped to the corresponding LGs. A sum of 23 quantitative trait loci from 11 traits was detected using the composite interval mapping algorithm. A consistent interval between a035_1 and a170_1 on LG5 was detected as a main-effect locus among the resistance QTLs to Phytophthora capsici at high-, intermediate- and low-level tests, and interactions between the QTLs for high-level resistance test were found. Considering the epistatic effect, those QTLs could explain up to 98.25% of the phenotype variations of resistance. Moreover, 17 QTLs for another eight traits were found to locate on LG3, 4, and 12 mostly with varying phenotypic contribution. Furthermore, the locus for corolla color was mapped to LG10 as a marker. The integrated map and the QTLs identified would be helpful for current genetics research and crop breeding, especially in the Solanaceae family. PMID:22684870

QTL and QTL x environment effects on agronomic and nitrogen acquisition traits in rice.

Science.gov (United States)

Senthilvel, Senapathy; Vinod, Kunnummal Kurungara; Malarvizhi, Palaniappan; Maheswaran, Marappa

2008-09-01

Agricultural environments deteriorate due to excess nitrogen application. Breeding for low nitrogen responsive genotypes can reduce soil nitrogen input. Rice genotypes respond variably to soil available nitrogen. The present study attempted quantification of genotype x nitrogen level interaction and mapping of quantitative trait loci (QTLs) associated with nitrogen use efficiency (NUE) and other associated agronomic traits. Twelve parameters were observed across a set of 82 double haploid (DH) lines derived from IR64/Azucena. Three nitrogen regimes namely, native (0 kg/ha; no nitrogen applied), optimum (100 kg/ha) and high (200 kg/ha) replicated thrice were the environments. The parents and DH lines were significantly varying for all traits under different nitrogen regimes. All traits except plant height recorded significant genotype x environment interaction. Individual plant yield was positively correlated with nitrogen use efficiency and nitrogen uptake. Sixteen QTLs were detected by composite interval mapping. Eleven QTLs showed significant QTL x environment interactions. On chromosome 3, seven QTLs were detected associated with nitrogen use, plant yield and associated traits. A QTL region between markers RZ678, RZ574 and RZ284 was associated with nitrogen use and yield. This chromosomal region was enriched with expressed gene sequences of known key nitrogen assimilation genes.

[An ADAA model and its analysis method for agronomic traits based on the double-cross mating design].

Science.gov (United States)

Xu, Z C; Zhu, J

2000-01-01

According to the double-cross mating design and using principles of Cockerham's general genetic model, a genetic model with additive, dominance and epistatic effects (ADAA model) was proposed for the analysis of agronomic traits. Components of genetic effects were derived for different generations. Monte Carlo simulation was conducted for analyzing the ADAA model and its reduced AD model by using different generations. It was indicated that genetic variance components could be estimated without bias by MINQUE(1) method and genetic effects could be predicted effectively by AUP method; at least three generations (including parent, F1 of single cross and F1 of double-cross) were necessary for analyzing the ADAA model and only two generations (including parent and F1 of double-cross) were enough for the reduced AD model. When epistatic effects were taken into account, a new approach for predicting the heterosis of agronomic traits of double-crosses was given on the basis of unbiased prediction of genotypic merits of parents and their crosses. In addition, genotype x environment interaction effects and interaction heterosis due to G x E interaction were discussed briefly.

QTL underlying some agronomic traits in barley detected by SNP markers.

Science.gov (United States)

Wang, Jibin; Sun, Genlou; Ren, Xifeng; Li, Chengdao; Liu, Lipan; Wang, Qifei; Du, Binbin; Sun, Dongfa

2016-07-07

Increasing the yield of barley (Hordeum vulgare L.) is a main breeding goal in developing barley cultivars. A high density genetic linkage map containing 1894 SNP and 68 SSR markers covering 1375.8 cM was constructed and used for mapping quantitative traits. A late-generation double haploid population (DH) derived from the Huaai 11 × Huadamai 6 cross was used to identify QTLs and QTL × environment interactions for ten traits affecting grain yield including length of main spike (MSL), spikelet number on main spike (SMS), spikelet number per plant (SLP), grain number per plant (GP), grain weight per plant (GWP), grain number per spike (GS), thousand grain weight (TGW), grain weight per spike (GWS), spike density (SPD) and spike number per plant (SP). In single environment analysis using composite interval mapping (CIM), a total of 221 QTLs underlying the ten traits were detected in five consecutive years (2009-2013). The QTLs detected in each year were 50, 48, 41, 41 and 41 for the year 2009 to 2013. The QTLs associated with these traits were generally clustered on chromosome 2H, 4H and 7H. In multi-environment analysis, a total of 111 significant QTLs including 18 for MSL, 16 for SMS, 15 for SPD, 5 for SP, 4 for SLP, 14 for TGW, 5 for GP, 11 for GS, 8 for GWP, and 15 for GWS were detected in the five years. Most QTLs showed significant QTL × environment interactions (QEI), nine QTLs (qIMSL3-1, qIMSL4-1, qIMSL4-2, qIMSL6-1, qISMS7-1, qISPD2-7, qISPD7-1, qITGW3-1 and qIGWS4-3) were detected with minimal QEI effects and stable in different years. Among 111 QTLs,71 (63.40 %) QTLs were detected in both single and multiple environments. Three main QTL cluster regions associated with the 10 agronomic traits on chromosome 2H, 4H and 7H were detected. The QTLs for SMS, SLP, GP and GWP were located in the region near Vrs1 on chromosome 2H. The QTLs underlying SMS, SPD and SLP were clustered on chromosome 4H. On the terminal of chromosome 7H, there was a QTL

Genetic analysis of some agronomic traits (gossypium hamster L.) in cotton

International Nuclear Information System (INIS)

Zulqarnain, M.; Khan, I.A.; Shakeel, T.; JAfri, J.S.

1998-01-01

Four varieties of cotton were crossed in a complete diallel fashion to evaluate the mode of inheritance of different agronomic traits. Height of main stem, number of bolls per plant, boll weight and yield of seed cotton per plant appeared to be controlled by additive with partial dominance type of gene action. While number of seeds per boll was controlled by over dominance type of gene action. Variety MNH-93 possessed dominant genes for height of main stem, number of bolls per plant number of seeds per boll and yield of seed cotton per plant. AMSI-38 carried dominant genes for boll weight and recessive for number of bolls per plant, number of seeds per boll and boll weight. Height of main stem and yield of seed cotton were controlled by recessive genes in Variety AMSI-38. (author)

Genome Wide Association Study for Drought, Aflatoxin Resistance, and Important Agronomic Traits of Maize Hybrids in the Sub-Tropics

Science.gov (United States)

Farfan, Ivan D. Barrero; De La Fuente, Gerald N.; Murray, Seth C.; Isakeit, Thomas; Huang, Pei-Cheng; Warburton, Marilyn; Williams, Paul; Windham, Gary L.; Kolomiets, Mike

2015-01-01

The primary maize (Zea mays L.) production areas are in temperate regions throughout the world and this is where most maize breeding is focused. Important but lower yielding maize growing regions such as the sub-tropics experience unique challenges, the greatest of which are drought stress and aflatoxin contamination. Here we used a diversity panel consisting of 346 maize inbred lines originating in temperate, sub-tropical and tropical areas testcrossed to stiff-stalk line Tx714 to investigate these traits. Testcross hybrids were evaluated under irrigated and non-irrigated trials for yield, plant height, ear height, days to anthesis, days to silking and other agronomic traits. Irrigated trials were also inoculated with Aspergillus flavus and evaluated for aflatoxin content. Diverse maize testcrosses out-yielded commercial checks in most trials, which indicated the potential for genetic diversity to improve sub-tropical breeding programs. To identify genomic regions associated with yield, aflatoxin resistance and other important agronomic traits, a genome wide association analysis was performed. Using 60,000 SNPs, this study found 10 quantitative trait variants for grain yield, plant and ear height, and flowering time after stringent multiple test corrections, and after fitting different models. Three of these variants explained 5–10% of the variation in grain yield under both water conditions. Multiple identified SNPs co-localized with previously reported QTL, which narrows the possible location of causal polymorphisms. Novel significant SNPs were also identified. This study demonstrated the potential to use genome wide association studies to identify major variants of quantitative and complex traits such as yield under drought that are still segregating between elite inbred lines. PMID:25714370

Extrapolative microRNA precursor based SSR mining from tea EST database in respect to agronomic traits.

Science.gov (United States)

Hazra, Anjan; Dasgupta, Nirjhar; Sengupta, Chandan; Das, Sauren

2017-07-06

Tea (Camellia sinensis, (L.) Kuntze) is considered as most popular drink across the world and it is widely consumed beverage for its several health-benefit characteristics. These positive traits primarily rely on its regulatory networks of different metabolic pathways. Development of microsatellite markers from the conserved genomic regions are being worthwhile for reviewing the genetic diversity of closely related species or self-pollinated species. Although several SSR markers have been reported, in tea, the trait-specific Simple Sequence Repeat (SSR) markers, leading to be useful in marker assisted breeding technique, are yet to be identified. Micro RNAs are short, non-coding RNA molecules, involved in post transcriptional mode of gene regulation and thus effects on related phenotype. Present study deals with identification of the microsatellite motifs within the reported and predicted miRNA precursors that are effectively followed by designing of primers from SSR flanking regions in order to PCR validation. In addition to the earlier reports, two new miRNAs are predicting here from tea expressed tag sequence database. Furthermore, 18 SSR motifs are found to be in 13 of all 33 predicted miRNAs. Trinucleotide motifs are most abundant among all followed by dinucleotides. Since, miRNA based SSR markers are evidenced to have significant role on genetic fingerprinting study, these outcomes would pave the way in developing novel markers for tagging tea specific agronomic traits as well as substantiating non-conventional breeding program.

DISSECTING QUANTITATIVE TRAIT LOCI FOR AGRONOMIC TRAITS RESPONDING TO IRON DEFICEINCY IN MUNGBEAN [Vigna radiata (L. Wilczek

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Prakit Somta

2014-06-01

Full Text Available Calcareous soil is prevalent in many areas of the world agricultural land causing substantial yield loss of crops. We previously identified two quantitative trait locus (QTL qIDC3.1 and qIDC2.1 controlling leaf chlorosis in mungbean grown in calcareous soil in two years (2010 and 2011 using visual score and SPAD measurement in a RIL population derived from KPS2 (susceptible and NM10-12-1 (resistant. The two QTLs together accounted for 50% of the total leaf chlorosis variation and only qIDC3.1 was confirmed, although heritability estimated for the traits was as high as 91.96%. In this study, we detected QTLs associated with days to flowering , plant height, number of pods per plants, number of seeds per pods, and seed yield per plants in the same population grown under the same environment with the aim to identify additional QTLs controlling resistance to calcareous soil in mungbean. Single marker analysis revealed 18 simple sequence repeat markers, while composite interval mapping identified 33 QTLs on six linkage groups (1A, 2, 3, 4, 5 and 9 controlling the five agronomic traits. QTL cluster on LG 3 coincided with the position of qIDC3.1, while QTL cluster on LG 2 was not far from qIDC2.1. The results confirmed the importance of qIDC3.1 and qIDC2.1 and revealed four new QTLs for the resistance to calcareous soil.

Marker traits association of agronomical traits correlated with stagnant flooding tolerance in rice

Science.gov (United States)

Sitaresmi, T.; Utami, D. W.; Suwarno, W. B.; Ardie, S. W.; Susanto, U.; Aswidinnoor, H.

2017-05-01

In deep-water areas, the water depth increases gradually throughout the year and maintains up to more than 50 cm of deep of water for long period. In these situations, elongation ability is necessary to allow the plants to keep up with rising floodwater. The elongation of internode during submergence is regulated by environmental and hormonal factors. The objective of this study was aimed to identify the SNP markers on 384 SNPs linked with agronomical and morphological traits related to stagnant flooding tolerance. The research were conducted at Indonesian Center for Rice Research and Indonesian Centre for Agricultural Biotechnology and Genetic Resources Research and Development. The phenotypical data was collected from F2 from bi-parental crossing of IR 42 and IRRI 119. IR 42 was sensitive parent, and IRRI 119 was tolerant. DNA extraction for rice was using a modified version of Murray and Thompson method using cetyl tri-methyl-ammonium bromide (CTAB). The genotyping was carried out using 384 SNPs Golden Gate Illumina assay. Association analysis between SNP markers and phenotypical data was performed using General Linear Model in Tassel versus 5.0 software program. Based on GLM analysis, the significant marker for plant height with P value < 0.05 are TBGI275345, TBGI275367, and TBGI424383. The significant marker for number of tiller are TBGI000722, TBGI258600, TBGI270843, TBGI271066, TBGI271076, TBGI272122, TBGI272241, and TBGI327790. Two of them, TBGI424383 and TBGI271066 were expected associated with family of protein kinase which play role in plant stress signalling.

Marker traits association of agronomical traits correlated with stagnant flooding tolerance in rice

International Nuclear Information System (INIS)

Sitaresmi, T; Utami, D W; Suwarno, W B; Ardie, S W; Aswidinnoor, H; Susanto, U

2017-01-01

In deep-water areas, the water depth increases gradually throughout the year and maintains up to more than 50 cm of deep of water for long period. In these situations, elongation ability is necessary to allow the plants to keep up with rising floodwater. The elongation of internode during submergence is regulated by environmental and hormonal factors. The objective of this study was aimed to identify the SNP markers on 384 SNPs linked with agronomical and morphological traits related to stagnant flooding tolerance. The research were conducted at Indonesian Center for Rice Research and Indonesian Centre for Agricultural Biotechnology and Genetic Resources Research and Development. The phenotypical data was collected from F2 from bi-parental crossing of IR 42 and IRRI 119. IR 42 was sensitive parent, and IRRI 119 was tolerant. DNA extraction for rice was using a modified version of Murray and Thompson method using cetyl tri-methyl-ammonium bromide (CTAB). The genotyping was carried out using 384 SNPs Golden Gate Illumina assay. Association analysis between SNP markers and phenotypical data was performed using General Linear Model in Tassel versus 5.0 software program. Based on GLM analysis, the significant marker for plant height with P value < 0.05 are TBGI275345, TBGI275367, and TBGI424383. The significant marker for number of tiller are TBGI000722, TBGI258600, TBGI270843, TBGI271066, TBGI271076, TBGI272122, TBGI272241, and TBGI327790. Two of them, TBGI424383 and TBGI271066 were expected associated with family of protein kinase which play role in plant stress signalling. (paper)

Analysis of genetic and genotype X environment interaction effects for agronomic traits of rice (oryza sativa l.) in salt tolerance

International Nuclear Information System (INIS)

Zhou, H.K.; Hayat, Y.; Fang, L.J.; Guo, R.F.; He, J.M.; Xu, H.M.

2010-01-01

A diallel cross experiment of 4 rice (Oryza sativa L.) female and 6 male varieties was conducted to study the genetic effects and their interaction with salt-stress condition of 7 agronomic traits in normal and salt-stressed planting conditions. The panicle length (PL), effective number of panicles per plant (ENP), plumped number of grains per panicles (PNG), total number of grains per panicles (TNG), 1000-grain weight (W), seed setting ratio (SSR) and grain weight per plant (PGW), were investigated. A genetic model including additive effect, dominance effect and their interaction effects with environment (ADE) was employed for analysis of data. It was observed that significant (p<0.05) additive effects, dominance effects, additive X environment interaction effects and dominance X environment interaction effects exist for most of the agronomic traits of rice. In addition, significant (p<0.05) narrow sense heritabilities of ENP, PNG, TNG, W and PGW were found, indicating that the genetic performance of these traits are greatly affected by salt stress condition. A significant (p<0.05) negative correlations in the additive effects and additive X environment interaction effects detected between ENP and PNG suggesting that selection on increasing of ENP can reduce PNG. In addition, there exist a highly significant (p<0.01) positive dominance correlation among the dominance effects of the ENP, PNG and TNG, which shows that it is possible to breed salt-tolerant rice variety by coordinating large panicle and multi-panicle in utilization of heterosis. (author)

Genome-wide association mapping for yield and other agronomic traits in an elite breeding population of tropical rice (Oryza sativa).

Science.gov (United States)

Begum, Hasina; Spindel, Jennifer E; Lalusin, Antonio; Borromeo, Teresita; Gregorio, Glenn; Hernandez, Jose; Virk, Parminder; Collard, Bertrand; McCouch, Susan R

2015-01-01

Genome-wide association mapping studies (GWAS) are frequently used to detect QTL in diverse collections of crop germplasm, based on historic recombination events and linkage disequilibrium across the genome. Generally, diversity panels genotyped with high density SNP panels are utilized in order to assay a wide range of alleles and haplotypes and to monitor recombination breakpoints across the genome. By contrast, GWAS have not generally been performed in breeding populations. In this study we performed association mapping for 19 agronomic traits including yield and yield components in a breeding population of elite irrigated tropical rice breeding lines so that the results would be more directly applicable to breeding than those from a diversity panel. The population was genotyped with 71,710 SNPs using genotyping-by-sequencing (GBS), and GWAS performed with the explicit goal of expediting selection in the breeding program. Using this breeding panel we identified 52 QTL for 11 agronomic traits, including large effect QTLs for flowering time and grain length/grain width/grain-length-breadth ratio. We also identified haplotypes that can be used to select plants in our population for short stature (plant height), early flowering time, and high yield, and thus demonstrate the utility of association mapping in breeding populations for informing breeding decisions. We conclude by exploring how the newly identified significant SNPs and insights into the genetic architecture of these quantitative traits can be leveraged to build genomic-assisted selection models.

Ex-situ evaluation of morphological, agronomic and qualitative traits of a naturalized population of parsley (Petroselinum crispum (Mill Nyman

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Fusani, Pietro

2016-07-01

Full Text Available A naturalized population of parsley of the province of Trento, Italy, was evaluated ex-situ for its morphological and agronomic traits in a field trial in which it was compared with three commercial cultivars of the species. The naturalized population belongs to the smooth leaf type for the absence of curling, and differed from the other smooth leaf type accessions for the lower plant height, the smaller length of petiole and the prostrate attitude of the plant, all undesirable characteristics which make the harvest of plants more difficult. The yields of aerial parts and leaves were higher in the commercial cultivars, while the naturalized population had the highest yield and content of essential oil. Due to the high content and yield of essential oil, the naturalized population could be the object of an eventual breeding program aiming to improve the morphologic and agronomic undesirable characteristics.

Agronomic Evaluation and Genetic Variation of Tunisian Tall Fescue (Festuca arundinacea Schreb.

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N. Chtourou-Ghorbel

2011-01-01

Full Text Available Nine important agronomic traits were used to assess the genetic diversity of Tunisian tall fescue and to investigate the extent of genotype X environment (GE interaction and its implications for breeding programs. These traits were studied for three consecutive years in thirty-five spontaneous populations and three cultivars. Panicle size contributed to seeds production, while the plant height at harvest and dry matter yield were selected for forage performance. Analysis of variance demonstrated that population attitude depended on the year and environmental conditions. Principal component analysis revealed significant similarities among some spontaneous populations and cultivars. The relationship between environmental conditions and agronomic traits revealed the influence of altitude, soil texture and minimum temperature on forage production, seed yield, and the architecture of plants, respectively. In addition, the local adapted ecotypes originating from Bizerte, Sidi Nsir, and Rass Rajel attained greater agronomic potentialities than control cultivars and were of considerable economic interest for the improvement of Tunisian tall fescue.

Association Mapping for Important Agronomic Traits in Safflower (Carthamus tinctorius L. Core Collection Using Microsatellite Markers

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Heena Ambreen

2018-03-01

Full Text Available Carthamus tinctorius L. (safflower is an important oilseed crop producing seed oil rich in unsaturated fatty acids. Scarcity of identified marker-trait associations is a major limitation toward development of successful marker-assisted breeding programs in safflower. In the present study, a safflower panel (CartAP comprising 124 accessions derived from two core collections was assayed for its suitability for association mapping. Genotyping of CartAP using microsatellite markers revealed significant genetic diversity indicated by Shannon information index (H = 0.7537 and Nei's expected heterozygosity (I = 0.4432. In Principal Coordinate Analysis, the CartAP accessions were distributed homogeneously in all quadrants indicating their diverse nature. Distance-based Neighbor Joining analysis did not delineate the CartAP accessions in consonance with their geographical origin. Bayesian analysis of population structure of CartAP demonstrated the unstructured nature of the association panel. Kinship analysis at population (Gij and individual level (Fij revealed absence of or weak relatedness between the CartAP accessions. The above parameters established the suitability of CartAP for association mapping. We performed association mapping using phenotypic data for eight traits of agronomic value (viz., seed oil content, oleic acid, linoleic acid, plant height, number of primary branches, number of capitula per plant, 100-seed weight and days to 50% flowering available for two growing seasons (2011–2012 and 2012–2013 through General Linear Model and Mixed Linear Model. Our study identified ninety-six significant marker-trait associations (MTAs; P < 0.05 of which, several MTAs with correlation coefficient (R2 > 10% were consistently represented in both models and in both seasons for traits viz., oil content, oleic acid content, linoleic acid content and number of primary branches. Several MTAs with high R2-values were detected either in a majority or in

Association Mapping for Important Agronomic Traits in Safflower (Carthamus tinctorius L.) Core Collection Using Microsatellite Markers.

Science.gov (United States)

Ambreen, Heena; Kumar, Shivendra; Kumar, Amar; Agarwal, Manu; Jagannath, Arun; Goel, Shailendra

2018-01-01

Carthamus tinctorius L. (safflower) is an important oilseed crop producing seed oil rich in unsaturated fatty acids. Scarcity of identified marker-trait associations is a major limitation toward development of successful marker-assisted breeding programs in safflower. In the present study, a safflower panel (CartAP) comprising 124 accessions derived from two core collections was assayed for its suitability for association mapping. Genotyping of CartAP using microsatellite markers revealed significant genetic diversity indicated by Shannon information index ( H = 0.7537) and Nei's expected heterozygosity ( I = 0.4432). In Principal Coordinate Analysis, the CartAP accessions were distributed homogeneously in all quadrants indicating their diverse nature. Distance-based Neighbor Joining analysis did not delineate the CartAP accessions in consonance with their geographical origin. Bayesian analysis of population structure of CartAP demonstrated the unstructured nature of the association panel. Kinship analysis at population ( G ij ) and individual level ( F ij ) revealed absence of or weak relatedness between the CartAP accessions. The above parameters established the suitability of CartAP for association mapping. We performed association mapping using phenotypic data for eight traits of agronomic value ( viz ., seed oil content, oleic acid, linoleic acid, plant height, number of primary branches, number of capitula per plant, 100-seed weight and days to 50% flowering) available for two growing seasons (2011-2012 and 2012-2013) through General Linear Model and Mixed Linear Model. Our study identified ninety-six significant marker-trait associations (MTAs; P 10% were consistently represented in both models and in both seasons for traits viz ., oil content, oleic acid content, linoleic acid content and number of primary branches. Several MTAs with high R 2 -values were detected either in a majority or in some environments (models and/or seasons). Many MTAs were also

Assessment of heritability and genetic advance for agronomic traits in durum wheat (Triticum durum Desf.

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HASSAN NIKKHAHKOUCHAKSARAEI

2017-09-01

Full Text Available In order to evaluate the amount of heritability for desirable agronomic characteristics and the genetic progress associated with grain yield of durum wheat (Triticum durum Desf., a split plot experiment was carried out with four replications during three cropping seasons (2009-2012. Three sowing dates (as environmental factor and six durum wheat varieties (as genotypic factor were considered as main and sub factors respectively. Analysis of variance showed interaction effects between genotypes and environments in days to ripening, plant height, spike length, number of grains per spike, number of spikes per unit area, grain mass and grain yield. The grain yield showed the highest positive correlation with number of grains per spike also grain mass (91 % and 85 %, respectively. A relatively high heritability of these traits (82.1 % and 82.2 %, respectively suggests that their genetic improvement is possible. The maximum genetic gain (19.6 % was observed for grain mass, indicating this trait should be a very important indicator for durum wheat breeders, although the climatic effects should not be ignored.

Correlation and path analysis on main agronomic traits of progeny from space mutation maize inbred lines

International Nuclear Information System (INIS)

Zhang Caibo; Wu Zhangdong; Xu Wei; Rong Tingzhao; Cao Moju

2013-01-01

In order to discover and utilize the valuable resources from spaceflight mutagenesis maize offspring effectively, cross combinations derived from the offspring of three different maize inbred lines induced by space flight were made to investigate the yield and related agronomic traits under different environmental conditions. Correlation and path analysis indicated that the factors affecting the yield of combinations varied with different mutagenic materials and environmental effects with larger effect coming from environment. Therefore, different selection strategies should be chosen for different induced maize. For the 08-641 mutagenic material, the 100-kernel weight should be first considered to select while taking into account the number of rows per ear and kernels per row. For the RP125 mutagenic material, the kernels per row should be first selected, and then to select the 100-kernels weight and the number of rows per ear traits. For 18-599 mutagenic material, the 100-seed weight should be first selected, then the plant height, ear diameter, ear height, kernels rate and other traits should be selected in different environments. Combined with field resistance, plant types and other traits, excellent maize inbred lines with high yield potential from space mutagenesis offspring were selected. Thus study has obtained some breeding materials useful for further breeding purpose, and provide a reference method as how to use the spaceflight induced materials for for maize breeding. (authors)

Cytogenetic, genomic in situ hybridization (GISH) and agronomic ...

African Journals Online (AJOL)

F3 generations of a wheat-Psathyrostachys huashanica intergeneric cross. Their agronomic traits were evaluated in the field and their meiotic behaviors and chromosome composition were analyzed by cytogenetic and GISH (genomic in situ ...

Stability of agronomic and yield related traits of Jatropha curcas accessions raised from cuttings

Science.gov (United States)

Mat, Nurul Hidayah Che; Yaakob, Zahira; Ratnam, Wickneswari

2016-11-01

Monitoring stability of agronomic and yield related traits is important for prediction of crop yields. This study was a latter study for the evaluation of 295 J. curcas individuals representing 21 accessions from eight countries at Biodiesel Research Station of Universiti Kebangsaan Malaysia, Kuala Pilah planted in December 2012. In this study, 183 J. curcas individuals were selected randomly from the population and their growth performance evaluated from December 2013 to December 2014. All the individual plants were raised from cuttings. The yield related data were recorded periodically and performance of each accession was analyzed using Statistical Analysis System (SAS) 9.4. Five traits which were number of fruits per plant (NFPP), number of fruits per inflorescence (NFPI), hundred seed weight (g) (HSW), number of seeds per plant (NSPP) and yield per plant (g) (YPP) showed significant differences among the accessions after two years of planting. Maximum values for each trait were 208 cm for plant height (PH), 31 for number of branches per plant (BPP), 115 for number of inflorescence per plant (NIPP), 582 for NFPP, 7 for NFPI, 307 for number of flowers per inflorescence (NFI), 17 for number of female flowers per inflorescence (NFFPI), 91.6 g for HSW, 1647.1 for NSPP and 927.6 g for YPP. Most of the plants which had performed well in the first year were among the best performers in the second year.

Genetic Variability, Genotype × Environment Interaction, Correlation, and GGE Biplot Analysis for Grain Iron and Zinc Concentration and Other Agronomic Traits in RIL Population of Sorghum (Sorghum bicolor L. Moench

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Rahul M. Phuke

2017-05-01

Full Text Available The low grain iron and zinc densities are well documented problems in food crops, affecting crop nutritional quality especially in cereals. Sorghum is a major source of energy and micronutrients for majority of population in Africa and central India. Understanding genetic variation, genotype × environment interaction and association between these traits is critical for development of improved cultivars with high iron and zinc. A total of 336 sorghum RILs (Recombinant Inbred Lines were evaluated for grain iron and zinc concentration along with other agronomic traits for 2 years at three locations. The results showed that large variability exists in RIL population for both micronutrients (Iron = 10.8 to 76.4 mg kg−1 and Zinc = 10.2 to 58.7 mg kg−1, across environments and agronomic traits. Genotype × environment interaction for both micronutrients (iron and zinc was highly significant. GGE biplots comparison for grain iron and zinc showed greater variation across environments. The results also showed that G × E was substantial for grain iron and zinc, hence wider testing needed for taking care of G × E interaction to breed micronutrient rich sorghum lines. Iron and zinc concentration showed high significant positive correlation (across environment = 0.79; p < 0.01 indicating possibility of simultaneous effective selection for both the traits. The RIL population showed good variability and high heritabilities (>0.60, in individual environments for Fe and Zn and other traits studied indicating its suitability to map QTL for iron and zinc.

Prediction of industrial tomato hybrids from agronomic traits and ISSR molecular markers.

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Figueiredo, A S T; Resende, J T V; Faria, M V; Da-Silva, P R; Fagundes, B S; Morales, R G F

2016-05-13

Heterosis is a highly relevant phenomenon in plant breeding. This condition is usually established in hybrids derived from crosses of highly divergent parents. The success of a breeder in obtaining heterosis is directly related to the correct identification of genetically contrasting parents. Currently, the diallel cross is the most commonly used methodology to detect contrasting parents; however, it is a time- and cost-consuming procedure. Therefore, new tools capable of performing this task quickly and accurately are required. Thus, the purpose of this study was to estimate the genetic divergence in industrial tomato lines, based on agronomic traits, and to compare with estimates obtained using inter-simple sequence repeat (ISSR) molecular markers. The genetic divergence among 10 industrial tomato lines, based on nine morphological characters and 12 ISSR primers was analyzed. For data analysis, Pearson and Spearman correlation coefficients were calculated between the genetic dissimilarity measures estimated by Mahalanobis distance and Jaccard's coefficient of genetic dissimilarity from the heterosis estimates, combining ability, and means of important traits of industrial tomato. The ISSR markers efficiently detected contrasting parents for hybrid production in tomato. Parent RVTD-08 was indicated as the most divergent, both by molecular and morphological markers, that positively contributed to increased heterosis and by the specific combining ability in the crosses in which it participated. The genetic dissimilarity estimated by ISSR molecular markers aided the identification of the best hybrids of the experiment in terms of total fruit yield, pulp yield, and soluble solids content.

Genetic divergence among accessions of Axonopus jesuiticus x A. scoparius based on morphological and agronomical traits

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SIMONE M. SCHEFFER-BASSO

2014-03-01

Full Text Available This study had the objective of assessing the genetic divergence in giant missionary grass (Axonopus jesuiticus x A. scoparius germplasm based on morphological and agronomic traits. Five accessions were evaluated in the field: V14337, V14403, V14404, V14405 and V14406. Three contrasting groups were formed using the UPGMA clustering method: V14337 and V14404 formed one group, V14403 and V14405 formed another, and V14406 was isolated from the other accessions. The most striking traits for the identification of the accessions were the height of the plant and the change color of the leaf. Only V14406 accession had purplish green leaves. The other four accessions differed with regards to plant height and dry matter production, with superiority of V14337 and V14404 accessions. The high similarity, as assessed by the mean Euclidean distance, suggests that V14337 and V14404 share the same genotype. The genotypic variability among accessions indicates their potential use in breeding programs.

Identification of loci governing eight agronomic traits using a GBS-GWAS approach and validation by QTL mapping in soya bean.

Science.gov (United States)

Sonah, Humira; O'Donoughue, Louise; Cober, Elroy; Rajcan, Istvan; Belzile, François

2015-02-01

Soya bean is a major source of edible oil and protein for human consumption as well as animal feed. Understanding the genetic basis of different traits in soya bean will provide important insights for improving breeding strategies for this crop. A genome-wide association study (GWAS) was conducted to accelerate molecular breeding for the improvement of agronomic traits in soya bean. A genotyping-by-sequencing (GBS) approach was used to provide dense genome-wide marker coverage (>47,000 SNPs) for a panel of 304 short-season soya bean lines. A subset of 139 lines, representative of the diversity among these, was characterized phenotypically for eight traits under six environments (3 sites × 2 years). Marker coverage proved sufficient to ensure highly significant associations between the genes known to control simple traits (flower, hilum and pubescence colour) and flanking SNPs. Between one and eight genomic loci associated with more complex traits (maturity, plant height, seed weight, seed oil and protein) were also identified. Importantly, most of these GWAS loci were located within genomic regions identified by previously reported quantitative trait locus (QTL) for these traits. In some cases, the reported QTLs were also successfully validated by additional QTL mapping in a biparental population. This study demonstrates that integrating GBS and GWAS can be used as a powerful complementary approach to classical biparental mapping for dissecting complex traits in soya bean. © 2014 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.

Assessment of Genetic Parameters of Agronomic Traits in Bread Wheat using Generation Means Analysis under water-limited Conditions

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M Dorrani-Nejad

2017-10-01

Full Text Available Introduction Wheat is the oldest and most important cultivated crop in the world and has fundamental role in human food security. Drought is one of the most common environmental stresses that affect growth and development of plants. Most parts of Iran’s cultivation land are located in arid and semiarid regions and because of water deficiency, plant stress appear and wheat performance reduces severely in these regions. In such circumstances, the production of drought tolerant varieties has special importance. Understand the genetic basis of yield and yield related traits is necessary in breeding programs. One of the best approaches to determine genetic parameters is generation means analysis method, due to it allows breeders to predict epistasis. In order to estimate genetic parameters and evaluation of gene action controlling agronomic traits in bread wheat under moisture stress, F4 families derived from cross between Roushan and Kavir along with F2, F3 and parents, were evaluated under moisture stress. Materials and Methods Field experiment was carried out in research field of Shahid Bahonar University of Kerman, during growing season of year 2013-2014 using Augmented design with 5 known check cultivars (Roushan, Falat, Mahdavi, Karchia and Shahpasand. Stress treatment was cut off irrigation at heading stage. Grain yield and some agronomic traits were measured. Generation means analysis method was used to determine genetic parameters including additive effect (d, dominance effect (h, additive × additive [i], and dominance × dominance effect [l] were evaluated for different traits. Generation means analysis was carried out using equation 1. Y= m+α[d]+β[h]+α2[i]+2αβ[j]+β2[l] (1 Broad and narrow sense heritability of evaluated traits were estimated according to equation 2 and 3. Results and Discussion The study revealed a complex genetic control for studied traits. Genetic variation in F2, F3 and F4 was more than parents. Five

Agronomic performance and stability of andean common bean lines with white grains in Brazil

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Helton Santos Pereira

2014-06-01

Full Text Available This work evaluated the effect of genotype by environment interaction in Andean common bean lines with white grains, in Central Southern Brazil, to identify lines with high agronomic performance, stability and adaptability, aiming to meet domestic demand and to increase the Brazilian participation in the foreign market of common bean. Nineteen trials with twelve Andean lines were conducted in 2007, 2008 and 2009, in Central Southern Brazil. Grain yield and other agronomic traits were evaluated. Data were subjected to analysis of variance and of adaptability/stability using Annicchiarico and modified AMMI methods. Significant differences were found between lines for all traits evaluated. Genotype by environment interaction was important for lines with Andean origin and white seed. The utilization of weighted mean of absolute scores and yield with the AMMI results enabled the identification of the most stable and adapted lines. Lines Poroto Alubia, CNFB 16211, Ouro Branco and WAF 160 were stable and adapted, using both methods. CNFB 16211 line presented high agronomic performance, stability and adaptability and therefore this line may be a new cultivar. USWA 70 and WAF 75 lines presented grain size similar to that required by the foreign market and superior to the Brazilian cultivars, besides favorable agronomic traits, and thus these lines may be indicated as new cultivars.

Agronomic potentials of quality protein maize hybrids developed in ...

African Journals Online (AJOL)

Agronomic potentials of quality protein maize hybrids developed in Ghana. ... Ghana Journal of Agricultural Science ... and Wheat Improvement (CIMMYT) were evaluated on research stations and in farmers\\' fields in Ghana from 1995 to 1996.

Agronomic Performance and Bread Making Quality of Advanced ...

African Journals Online (AJOL)

Twenty bread wheat lines selected on the basis of their average grain protein content and yield were evaluated for six agronomic and eight baking quality traits associated with bread-making quality. All the lines were grown in randomly complete block design at two locations in Eastern Oromia, Ethiopia; namely, Haramaya ...

Agronomic Trait and Path Analysis of Agronomic Traits of Vegetable Soybean%鲜食大豆农艺性状鉴定及通径分析

Institute of Scientific and Technical Information of China (English)

伍新龄; 张旭; 莫家琪; 荆红彭; 赵菲; 关文强

2014-01-01

In order to select vegetable soybean with good quality and provide a reference for breeding,agronom-ic traits,physical and chemical indicators of Jinxiandou 3hao,Jinxiandou 4hao,2013-99,Tai 75,95-1 were meas-ured and compared,and correlation between the seed weight per plant and agronomic traits was analyzed. The results showed that 5 kinds of vegetable soybean varieties of pods with 1-2 seeds,plant height,100 seeds weight,100 pods weight,seed weight per plant,protein,glucose,cooking loses had significantly correlations. The seed weight per plant was positively correlated with plant height,node number,100 seeds weight,100 pods weight,pods on stem,pods with 1-3 seeds,and negatively with plant height initial node of branch. Pods with 1-2 seeds and plant height had main effects on seed weight per plant. Established method of yield prediction was found to closely fit results of the model both in theory and practice,which was suitable for the vegetable soybean yield prediction. After comparing 5 kinds of vegetable soybean,Jinxiandou 3hao was the most suitable kind of vegetable soybean grown in the Tianjin area.%对近年选育的津鲜豆3号、津鲜豆4号、2013-99、台75、95-1这5个鲜食大豆品种的农艺性状、理化指标进行测定分析和比较,并对鲜食大豆鲜荚产量与主要农艺性状指标进行相关分析,为筛选出较好的鲜食大豆品种及其品质育种提供参考。结果表明,5个鲜食大豆品种的二粒荚数、一粒荚数、株高、节数、百粒鲜质量、百荚质量、单株荚重、蛋白质、葡萄糖、蒸煮损失率均存在显著差异,单株荚重与株高、节数、百粒鲜质量、百荚质量、单株荚数、一粒荚数、二粒荚数和三粒荚数呈极度正相关,与结荚高度呈负相关。鲜食大豆的鲜荚产量主要影响因素为二粒荚数、一粒荚数和株高,建立�

Effect of Zeolite and Nitrogen Fertilizer Application under Water Deficit Stress Conditions on Agronomical and Physiological Traits of Rapeseed

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A. Ghiasvand Ghiasi

2014-08-01

Full Text Available In order to evaluation of zeolite and nitrogen fertilizer application effect on agronomic and physilogical traits of rapeseed (cv RGS003 under water deficit stress conditions, an experiment was conducted in factorial based on randomized complete block design with three replications during 2010 in Qazvin region, Iran. In the where, the two levels of irrigation factor as the normal irrigation (irrigation after 80 mm evaporation from class A pan as control and irrigation cease from stem elongation stage till end of growth, nitrogen factor was at three levels (0, 75 and 150 kg.ha-1 and zeolite factor (0 and 10tons per hectare were studied. Results showed that drought stress decreased evaluated traits such as silique per plant (41%, grain per silique (26%, 1000 seed weight (33%, grain yield (52.5%, oil percent (14%, RWC (31.5% and chlorophyll content (35%. Non-application of nitrogen had adverse effects on total traits and reduced them. However, zeolite application at water deficit stress conditions had positive and significant effect on total traits except of oil percent and chlorophyll content, specially improved grain yield and oil yield. Based on the results of this experiment, application of zeolite (10ton/ha-1 through storage and maintenance of water and nutrients, reduced the intensity and harmful effects of stress in plants and enhances crop yield.

Common bean genotypes for agronomic and market-related traits in VCU trials

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Alisson Fernando Chiorato

2015-02-01

Full Text Available Value for Cultivation and Use (VCU trials are undertaken when evaluating improved common bean (Phaseolus vulgaris L. lines, and knowledge of agronomic and market-related traits and disease reaction is instrumental in making cultivar recommendations. This study evaluates the yield, cooking time, grain color and reaction to anthracnose (Colletotrichum lindemuthianum, Fusarium wilt (Fusarium oxysporum f. sp. phaseoli and Curtobacterium wilt (Curtobacterium flaccumfaciens pv. flaccumfaciens of 25 common bean genotypes derived from the main common bean breeding programs in Brazil. Seventeen VCU trials were carried out in the rainy season, dry season and winter season from 2009 to 2011 in the state of São Paulo. Analyses of grain color and cooking time were initiated 60 days after harvest, and disease reaction analyses were performed in the laboratory under controlled conditions. In terms of yield, no genotype superior to the controls was observed for any of the seasons under consideration. Grains from the dry season exhibited better color, while the rainy season led to the shortest cooking times. The following genotypes BRS Esteio, BRS Esplendor and IAC Imperador were resistant to anthracnose, Fusarium wilt and Curtobacterium wilt and, in general, genotypes with lighter-colored grains were more susceptible to anthracnose and Fusarium wilt.

The agronomic traits of foreign cultivars and domestic populations of oilseed poppy

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Marina Brčić

2016-12-01

Full Text Available For the past few years, a rising interest for the production of oil poppy (Papaver somniferum L. on bigger areas in the Republic of Croatia has been noticed. The aim of this study was to determine seed yield and other agronomic traits of foreign cultivars and domestic populations of oilseed poppy in the environmental conditions of northwestern Croatia and select the best varieties for this area, considering the obtained results. The research was conducted in 2013 and 2015 at the experimental field of University of Zagreb, Faculty of Agriculture. The research involved four foreign cultivars (Opal, Lazur, Major, and Matis and two domestic populations of oilseed poppy named after locations where they had been collected: Gornji Bogićevci (IND00042 and Beli Manastir (IND00043. According to the obtained results, it can be concluded that the examined cultivars and domestic populations of oilseed poppy differed significantly in seed yield, capsule number per plant, seed weight per capsule, seed weight per plant, and thousand seed weight only in the year of 2013. On average, cultivars/populations with the highest yield were Opal (847 kg/ha, Beli Manastir (834 kg/ha, and Major (816 kg/ha. Oil content in poppy seed ranged from 42.5% (Lazur to 46.3% (Opal. Linoleic, oleic, and palmitic acids prevailed in examined cultivars and populations.

Qualitative trait loci analysis for seed yield and component traits in ...

African Journals Online (AJOL)

VANITHA

2014-02-05

Feb 5, 2014 ... improvement, plant breeders deal with several qualitative traits. However, the most ... Table 1. Characteristics of parental lines. Character ..... Sunflower, an agronomic crop, adapted to fundamental and applied biotechnology.

Induction of mutagenized tomato populations for investigation on agronomic traits and mutant phenotyping

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Rafiul Amin Laskar

2018-01-01

Full Text Available Global demand for tomato production increased tremendously due to its diverse utility in raw, cooked and processed form of food. This necessitates the continued supply of highly nutritious and better yielding improved cultivars to the producers, considering the rapid changing agro-climatic condition. In this study, induced mutant tomato populations of widely recommended tomato genotype Arka Vikas (Sel-22 were generated using chemical mutagen ethyl methane sulfonate (EMS, hydrazine hydrates (HZ and their combined treatments. In the in vitro study, a gradual reduction in germination percentage and seedling height occurred with the increasing concentrations of mutagens. Combination of EMS and HZ caused maximum biological inhibition followed by EMS and HZ treatments alone in M1 generation. The rate of survival and fertility in M1 plants of tomato was found highly affected due to mutagenic treatment, in which sensitivity toward combined treatment was found highest followed by EMS and HZ. Inspection on induced phenotypic variations in individual plants of M2 population resulted in identification and isolation of wide range of mutants with altered phenotypes. Highest mutation frequency was resulted by combined mutagens followed by the EMS and HZ treatment. Agronomic trait analyses showed intra and inter treatment variations in three quantitative traits (Plant height, fertile branch per plant and fruits per plant of M2 mutagenized population. Assessment on rate of mutant recovery in M2 population showed highest mutant recovery is possible with combination treatments and then 0.02% HZ followed by 0.02% EMS. In the present study, phenotyping of the mutants revealed that vegetative organs (‘plant size’, ‘plant habit’ and ‘leaf morphology’ was the most sensitive category (69.33% to which most of the mutant belongs, followed by ‘fruit color and size’ (20.27% and ‘germination’ (9.79%. Comparative investigation on number of mutants and

Effects of delaying transplanting on agronomic traits and grain yield of rice under mechanical transplantation pattern.

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Qihua Liu

Full Text Available A delay in the mechanical transplantation (MT of rice seedlings frequently occurs in Huanghuai wheat-rice rotation cropping districts of China, due to the late harvest of wheat, the poor weather conditions and the insufficiency of transplanters, missing the optimum transplanting time and causing seedlings to age. To identify how delaying transplanting rice affects the agronomic characteristics including the growth duration, photosynthetic productivity and dry matter remobilization efficiency and the grain yield under mechanical transplanting pattern, an experiment with a split-plot design was conducted over two consecutive years. The main plot includes two types of cultivation: mechanical transplanting and artificial transplanting (AT. The subplot comprises four japonica rice cultivars. The results indicate that the rice jointing, booting, heading and maturity stages were postponed under MT when using AT as a control. The tiller occurrence number, dry matter weight per tiller, accumulative dry matter for the population, leaf area index, crop growth rate, photosynthetic potential, and dry matter remobilization efficiency of the leaf under MT significantly decreased compared to those under AT. In contrast, the reduction rate of the leaf area during the heading-maturity stage was markedly enhanced under MT. The numbers of effective panicles and filled grains per panicle and the grain yield significantly decreased under MT. A significant correlation was observed between the dry matter production, remobilization and distribution characteristics and the grain yield. We infer that, as with rice from old seedlings, the decrease in the tiller occurrence, the photosynthetic productivity and the assimilate remobilization efficiency may be important agronomic traits that are responsible for the reduced grain yield under MT.

Quantitative trait loci for yield and morphological traits in maize under drought stress

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Nikolić Ana

2011-01-01

Full Text Available Drought is one of the most important factors contributing to crop yield loss. In order to develop maize varieties with drought tolerance, it is necessary to explore the genetic basis. Mapping quantitative trait loci (QTL that control the yield and associate agronomic traits is one way of understanding drought genetics. QTLs associated with grain yield (GY, leaf width (LW3, LW4 plant height (PH, ear height (EH, leaf number (NL, tassel branch number (TBN and tassel length (TL were studied with composite interval mapping. A total of 43 QTLs were detected, distributed on all chromosomes, except chromosome 9. Phenotypic variability determined for the identified QTLs for all the traits was in the range from 20.99 to 87.24%. Mapping analysis identified genomic regions associated with two traits in a manner that was consistent with phenotypic correlation among traits, supporting either pleiotropy or tight linkage among QTLs.

Capacidade combinatória para características agronômicas em feijão-de-vagem Combining ability for agronomic traits in snap bean

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Willian Krause

2012-09-01

species and many times common beans genotypes have interesting traits to be transferred to snap beans. The aim of this work was to evaluate the combining ability among four snap beans and one common bean genotypes considering agronomic traits. The genotypes were chosen based on genetic divergence and desirable agronomic traits. Crosses in a complete diallel without reciprocals design were performed. Eight agronomic traits were evaluated under field conditions from November 2007 to February 2008, in a randomized block design, with four replications, in Tangará da Serra, Mato Grosso, Brazil. The parents 'UEL 1' and 'Novirex' had the best performance and were indicated to start breeding programs aiming to develop promising populations. The combinations 'Manteiga Baixo' x 'Novirex' and 'Manteiga Baixo' x 'UEL 1' had the best results considering Specific Combining Ability. Yet, these combinations were originated from 'UEL 1' and 'Novirex', the two parents with superior General Combining Ability and also the best mean values.

GWAS of agronomic traits in soybean collection included in breeding pool in Kazakhstan.

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Zatybekov, Alibek; Abugalieva, Saule; Didorenko, Svetlana; Gerasimova, Yelena; Sidorik, Ivan; Anuarbek, Shynar; Turuspekov, Yerlan

2017-11-14

In recent years soybean is becoming one of the most important oilseed crops in Kazakhstan. Only within the last ten years (2006-2016), the area under soybean is expanded from 45 thousand hectares (ha) in 2006 to 120 thousand ha in 2016. The general trend of soybean expansion is from south-eastern to eastern and northern regions of the country, where average temperatures are lower and growing seasons are shorter. These new soybean growing territories were poorly examined in terms of general effects on productivity level among the diverse sample of soybean accessions. In this study, phenotypic data were collected in three separate regions of Kazakhstan and entire soybean sample was genotyped for identification of marker-trait associations (MTA). In this study, the collection of 113 accessions representing five different regions of the World was planted in 2015-2016 in northern, eastern, and south-eastern regions of Kazakhstan. It was observed that North American accessions showed the highest yield in four out of six trials especially in Northern Kazakhstan in both years. The entire sample was genotyped with 6 K SNP Illumina array. 4442 SNPs found to be polymorphic and were used for whole genome genotyping purposes. Obtained SNP markers data and field data were used for GWAS (genome-wide association study). 30 SNPs appear to be very significant in 42 MTAs in six studied environments. The study confirms the efficiency of GWAS for the identification of molecular markers which tag important agronomic traits. Overall thirty SNP markers associated with time to flowering and maturation, plant height, number of fertile nodes, seeds per plant and yield were identified. Physical locations of 32 identified out of 42 total MTAs coincide well with positions of known analogous QTLs. This result indicates importance of revealed MTAs for soybean growing regions in Kazakhstan. Obtained results would serve as required prerequisite for forming and realization of specific breeding

A haplotype map of genomic variations and genome-wide association studies of agronomic traits in foxtail millet (Setaria italica).

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Jia, Guanqing; Huang, Xuehui; Zhi, Hui; Zhao, Yan; Zhao, Qiang; Li, Wenjun; Chai, Yang; Yang, Lifang; Liu, Kunyan; Lu, Hengyun; Zhu, Chuanrang; Lu, Yiqi; Zhou, Congcong; Fan, Danlin; Weng, Qijun; Guo, Yunli; Huang, Tao; Zhang, Lei; Lu, Tingting; Feng, Qi; Hao, Hangfei; Liu, Hongkuan; Lu, Ping; Zhang, Ning; Li, Yuhui; Guo, Erhu; Wang, Shujun; Wang, Suying; Liu, Jinrong; Zhang, Wenfei; Chen, Guoqiu; Zhang, Baojin; Li, Wei; Wang, Yongfang; Li, Haiquan; Zhao, Baohua; Li, Jiayang; Diao, Xianmin; Han, Bin

2013-08-01

Foxtail millet (Setaria italica) is an important grain crop that is grown in arid regions. Here we sequenced 916 diverse foxtail millet varieties, identified 2.58 million SNPs and used 0.8 million common SNPs to construct a haplotype map of the foxtail millet genome. We classified the foxtail millet varieties into two divergent groups that are strongly correlated with early and late flowering times. We phenotyped the 916 varieties under five different environments and identified 512 loci associated with 47 agronomic traits by genome-wide association studies. We performed a de novo assembly of deeply sequenced genomes of a Setaria viridis accession (the wild progenitor of S. italica) and an S. italica variety and identified complex interspecies and intraspecies variants. We also identified 36 selective sweeps that seem to have occurred during modern breeding. This study provides fundamental resources for genetics research and genetic improvement in foxtail millet.

Assessment of Agronomic and Morphological Characteristics of Iranian Spinach Landrace in Esfahan Province

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peyman jafari

2017-10-01

Full Text Available Introduction: Spinach is one of the most important leafy vegetables, rich in calcium, phosphorus, potassium, vitamin C and B-carotene, and it is likely to be Iran's origin. More than 30 percent of the area under cultivation of in Iran leafy vegetables, allocated to spinach plant. Spinach is a cool season crop and its cultivation is done in the fall and in early spring. Various regions of Iran, has the vast genetic diversity in relation to the mass of spinach. In a study to evaluate the yield and agronomic traits spinach 121 mass Iran, the masses were divided into six clusters that each cluster has specific morphological and agronomic traits. Leafy vegetables, especially spinach are the main sources of nitrate absorption and about 70 percent of total dietary nitrate intake per person per day is provided by leafy vegetables. Material and Methods: To study the preliminary agronomic and morphological traits and nitrate amounts of 100 Iranian spinach mass are available in GenBank, an investigation was carried out in Agriculture and Education Center Research in Esfahan for two years (2013-2014 by using of five mass dominant cultivars, and two control landrace (Varamin 88 and Varamin prickly seed. The aim of the first year of the study was the primary isolation of superior landraces based on agronomic traits of spinach. At the end of the first year of growth, seed traits, including the type (smooth-prick, the width of the blade, leaf color, wrinkling of leaf area, leaf thickness, the petiole (standing, half-standing and sleeping, petiole length, shape of leaf, the shape of the leaf tip, bolting during plant growth and the number of male and female were determined. A total of 25 landraces selected in the first year of study were compared in the second year using a randomized complete block design with three replications. Studied traits were: yield, dry matter yield, number of leaves, leaf length, leaf width, and petiole length and nitrate levels

Agronomic performance of new open pollinated experimental lines of broccoli (Brassica oleracea L. var. italica) evaluated under organic farming.

Science.gov (United States)

Sahamishirazi, Samira; Moehring, Jens; Zikeli, Sabine; Fleck, Michael; Claupein, Wilhelm; Graeff-Hoenninger, Simone

2018-01-01

In order to develop new open pollinating cultivars of broccoli for organic farming, two experiments were conducted during fall 2015 and spring 2016. This study was aimed at comparing the agronomic performance of eleven new open pollinating breeding lines of broccoli to introduce new lines and to test their seasonal suitability for organic farming. Field experiments were carried out at the organic research station Kleinhohenheim of the University of Hohenheim (Stuttgart-Germany). Different agronomic traits total biomass fresh weight, head fresh weight, head diameter, hollow-stem, fresh weight harvest index and marketable yield were assessed together with commercial control cultivars. The data from both experiments were analyzed using a two-stage mixed model approach. In our study, genotype, growing season and their interaction had significant effects on most traits. Plants belonging to the fall growing season had bigger sizes in comparison to spring with significantly (pbroccoli heads. The low average minimum temperatures during the spring growing season lead to low biomass fresh weight but high fresh weight harvest index. Testing the seasonal suitability of all open pollinating lines showed that the considered fall season was better for broccoli production. However, the change in yield between the fall and the spring growing season was not significant for "Line 701" and "CHE-MIC". Considering the expression of different agronomic traits, "CHE-GRE-G", "Calinaro" and "CAN-SPB" performed the best in the fall growing season, and "CHE-GRE-G", "CHE-GRE-A", "CHE-BAL-A" and "CHE-MIC" and "Line 701" were best in the spring growing season, specifically due to the highest marketable yield and proportion of marketable heads.

Evaluation of agronomic and fruit quality traits of fig tree varieties (Ficus carica L.) grown in Mediterranean conditions

Energy Technology Data Exchange (ETDEWEB)

Pereira, C.; Serradilla, M.J.; Pérez-Gragera, F.; Martín, A.; Villalobos, M. C.; López-Corrales, M.

2017-07-01

In this work, the agronomic behaviour and fruit quality of ten varieties of common fig were evaluated for the establishment of new commercial orchards destined for fresh consumption. The following traits were measured: annual yield, cumulative yield, trunk cross sectional area (TCSA) and yield efficiency of each variety, as well as weight, width, total soluble solids (TSS), pH, titratable acidity (TA) and maturation index (MI) of brebas and figs. The results show that ‘Banane’ and ‘Brown Turkey’ were the earliest to enter into production, and ‘Banane’ showed the highest annual yield in the 7th green (2014), with 76 kg/tree, followed by ‘Brown Turkey’ (57.6 kg/tree), ‘Cuello Dama Blanco’ (52 kg/tree) and ‘Colar Elche’ (39 kg/tree). On the other hand, 'Cuello Dama Blanco' and 'De Rey' exhibited the better organoleptic traits, with TSS and MI values ranged from 18.7 ºBrix and 203.3 MI (‘Cuello Dama Blanco’) to 20.4 ºBrix and 187.1 MI (‘De Rey’) for brebas and from 21.4 ºBrix and 278.7 (‘Cuello Dama Blanco’) to 23.3 ºBrix and 255.6 (‘De Rey’) for figs. This study will allow the fruit grower to select the most interesting and appropriate range of varieties based on market needs taking into account the ripening season (early, middle or late) and fruit colour (green, purple or black).

Evaluation of agronomic and fruit quality traits of fig tree varieties (Ficus carica L.) grown in Mediterranean conditions

International Nuclear Information System (INIS)

Pereira, C.; Serradilla, M.J.; Pérez-Gragera, F.; Martín, A.; Villalobos, M. C.; López-Corrales, M.

2017-01-01

In this work, the agronomic behaviour and fruit quality of ten varieties of common fig were evaluated for the establishment of new commercial orchards destined for fresh consumption. The following traits were measured: annual yield, cumulative yield, trunk cross sectional area (TCSA) and yield efficiency of each variety, as well as weight, width, total soluble solids (TSS), pH, titratable acidity (TA) and maturation index (MI) of brebas and figs. The results show that ‘Banane’ and ‘Brown Turkey’ were the earliest to enter into production, and ‘Banane’ showed the highest annual yield in the 7th green (2014), with 76 kg/tree, followed by ‘Brown Turkey’ (57.6 kg/tree), ‘Cuello Dama Blanco’ (52 kg/tree) and ‘Colar Elche’ (39 kg/tree). On the other hand, 'Cuello Dama Blanco' and 'De Rey' exhibited the better organoleptic traits, with TSS and MI values ranged from 18.7 ºBrix and 203.3 MI (‘Cuello Dama Blanco’) to 20.4 ºBrix and 187.1 MI (‘De Rey’) for brebas and from 21.4 ºBrix and 278.7 (‘Cuello Dama Blanco’) to 23.3 ºBrix and 255.6 (‘De Rey’) for figs. This study will allow the fruit grower to select the most interesting and appropriate range of varieties based on market needs taking into account the ripening season (early, middle or late) and fruit colour (green, purple or black).

Use of modern tomato breeding germplasm for deciphering the genetic control of agronomical traits by Genome Wide Association study.

Science.gov (United States)

Bauchet, Guillaume; Grenier, Stéphane; Samson, Nicolas; Bonnet, Julien; Grivet, Laurent; Causse, Mathilde

2017-05-01

A panel of 300 tomato accessions including breeding materials was built and characterized with >11,000 SNP. A population structure in six subgroups was identified. Strong heterogeneity in linkage disequilibrium and recombination landscape among groups and chromosomes was shown. GWAS identified several associations for fruit weight, earliness and plant growth. Genome-wide association studies (GWAS) have become a method of choice in quantitative trait dissection. First limited to highly polymorphic and outcrossing species, it is now applied in horticultural crops, notably in tomato. Until now GWAS in tomato has been performed on panels of heirloom and wild accessions. Using modern breeding materials would be of direct interest for breeding purpose. To implement GWAS on a large panel of 300 tomato accessions including 168 breeding lines, this study assessed the genetic diversity and linkage disequilibrium decay and revealed the population structure and performed GWA experiment. Genetic diversity and population structure analyses were based on molecular markers (>11,000 SNP) covering the whole genome. Six genetic subgroups were revealed and associated to traits of agronomical interest, such as fruit weight and disease resistance. Estimates of linkage disequilibrium highlighted the heterogeneity of its decay among genetic subgroups. Haplotype definition allowed a fine characterization of the groups and their recombination landscape revealing the patterns of admixture along the genome. Selection footprints showed results in congruence with introgressions. Taken together, all these elements refined our knowledge of the genetic material included in this panel and allowed the identification of several associations for fruit weight, plant growth and earliness, deciphering the genetic architecture of these complex traits and identifying several new loci useful for tomato breeding.

Next biotech plants: new traits, crops, developers and technologies for addressing global challenges.

Science.gov (United States)

Ricroch, Agnès E; Hénard-Damave, Marie-Cécile

2016-08-01

Most of the genetically modified (GM) plants currently commercialized encompass a handful of crop species (soybean, corn, cotton and canola) with agronomic characters (traits) directed against some biotic stresses (pest resistance, herbicide tolerance or both) and created by multinational companies. The same crops with agronomic traits already on the market today will continue to be commercialized, but there will be also a wider range of species with combined traits. The timeframe anticipated for market release of the next biotech plants will not only depend on science progress in research and development (R&D) in laboratories and fields, but also primarily on how demanding regulatory requirements are in countries where marketing approvals are pending. Regulatory constraints, including environmental and health impact assessments, have increased significantly in the past decades, delaying approvals and increasing their costs. This has sometimes discouraged public research entities and small and medium size plant breeding companies from using biotechnology and given preference to other technologies, not as stringently regulated. Nevertheless, R&D programs are flourishing in developing countries, boosted by the necessity to meet the global challenges that are food security of a booming world population while mitigating climate change impacts. Biotechnology is an instrument at the service of these imperatives and a wide variety of plants are currently tested for their high yield despite biotic and abiotic stresses. Many plants with higher water or nitrogen use efficiency, tolerant to cold, salinity or water submergence are being developed. Food security is not only a question of quantity but also of quality of agricultural and food products, to be available and accessible for the ones who need it the most. Many biotech plants (especially staple food) are therefore being developed with nutritional traits, such as biofortification in vitamins and metals. The main

Genetics of the ovule fuzzless trait in Gossypium arboreum germplasm line PI 615737

Science.gov (United States)

The diploid cotton species Gossypium arboreum possesses many favorable agronomic traits such as drought tolerance and disease resistance, which can be utilized in the development of improved upland cotton cultivars. The USDA National Plant Germplasm System maintains more than 1,600 G. arboreum acces...

Genomewide Association Studies for 50 Agronomic Traits in Peanut Using the ‘Reference Set’ Comprising 300 Genotypes from 48 Countries of the Semi-Arid Tropics of the World

Science.gov (United States)

Pandey, Manish K.; Upadhyaya, Hari D.; Rathore, Abhishek; Vadez, Vincent; Sheshshayee, M. S.; Sriswathi, Manda; Govil, Mansee; Kumar, Ashish; Gowda, M. V. C.; Sharma, Shivali; Hamidou, Falalou; Kumar, V. Anil; Khera, Pawan; Bhat, Ramesh S.; Khan, Aamir W.; Singh, Sube; Li, Hongjie; Monyo, Emmanuel; Nadaf, H. L.; Mukri, Ganapati; Jackson, Scott A.; Guo, Baozhu; Liang, Xuanqiang; Varshney, Rajeev K.

2014-01-01

Peanut is an important and nutritious agricultural commodity and a livelihood of many small-holder farmers in the semi-arid tropics (SAT) of world which are facing serious production threats. Integration of genomics tools with on-going genetic improvement approaches is expected to facilitate accelerated development of improved cultivars. Therefore, high-resolution genotyping and multiple season phenotyping data for 50 important agronomic, disease and quality traits were generated on the ‘reference set’ of peanut. This study reports comprehensive analyses of allelic diversity, population structure, linkage disequilibrium (LD) decay and marker-trait association (MTA) in peanut. Distinctness of all the genotypes can be established by using either an unique allele detected by a single SSR or a combination of unique alleles by two or more than two SSR markers. As expected, DArT features (2.0 alleles/locus, 0.125 PIC) showed lower allele frequency and polymorphic information content (PIC) than SSRs (22.21 alleles /locus, 0.715 PIC). Both marker types clearly differentiated the genotypes of diploids from tetraploids. Multi-allelic SSRs identified three sub-groups (K = 3) while the LD simulation trend line based on squared-allele frequency correlations (r2) predicted LD decay of 15–20 cM in peanut genome. Detailed analysis identified a total of 524 highly significant MTAs (pvalue >2.1×10–6) with wide phenotypic variance (PV) range (5.81–90.09%) for 36 traits. These MTAs after validation may be deployed in improving biotic resistance, oil/ seed/ nutritional quality, drought tolerance related traits, and yield/ yield components. PMID:25140620

CORRELATION ANALYSIS OF AGRONOMIC CHARACTERS AND GRAIN YIELD OF RICE FOR TIDAL SWAMP AREAS

Directory of Open Access Journals (Sweden)

Aris Hairmansis

2013-05-01

Full Text Available Development of rice varieties for tidal swamp areas is emphasized on the improvement of rice yield potential in specific environment. However, grain yield is a complex trait and highly dependent on the other agronomic characters; while information related to the relationship between agronomic characters and grain yield in the breeding program particularly for tidal swamp areas is very limited. The objective of this study was to investigate relationship between agronomic characters and grain yield of rice as a basis for selection of high yielding rice varieties for tidal swamp areas. Agronomic characters and grain yield of nine advanced rice breeding lines and two rice varieties were evaluated in a series of experiments in tidal swamp areas, Karang Agung Ulu Village, Banyuasin, South Sumatra, for four cropping seasons in dry season (DS 2005, wet season (WS 2005/2006, DS 2006, and DS 2007. Result from path analysis revealed that the following characters had positive direct effect on grain yield, i.e. number of productive tillers per hill (p = 0.356, number of filled grains per panicle (p = 0.544, and spikelet fertility (p = 0.215. Plant height had negative direct effect (p = -0.332 on grain yield, while maturity, number of spikelets per panicle, and 1000-grain weight showed negligible effect on rice grain yield. Present study suggests that indirect selection of high yielding tidal swamp rice can be done by selecting breeding lines which have many product tive tillers, dense filled grains, and high spikelet fertility.

Combining ability and maternal effects for some agronomic and oil quality traits in safflower ( Carthamus Tinctorius, L. )

International Nuclear Information System (INIS)

Ragab, A.I.; Friedt, W.

1992-01-01

Combining ability and reciprocal effects for some agronomic and oil quality traits of safflower were studied in a diallel set of 4 parents. The used parents were local cultivar (Giza 1), exotic cultivar (A2sK1) and two induced gamma ray mutants (Mut. 1 and 2). General and specific combining ability and specific combining ability and reciprocal effects showed highly significant variances for most studied characters. Additive genetic variance was more important than non active for flowering date, first branch high, no.of capitula / plant, seed yield/plant, oil content and stearic acid. However, no.of branches/plant, 100-seed weight, palmitic acid, oleic and linoleic acids appeared to be under the control of epi static gene effect. Giza 1 (P 1) was the best general combiner for no.of branches and palmitic acid. Exotic cultivar 'A2sK1' (P 2) was the highest combiner for no.of capitula/plant and stearic acid. Mut.1 (P 3) was the best combiner for early flowering date, 100-seed weight and seed yield/plant. Mut.2 (P 4) was the highest combiner for oil content. 4 tab

Unmanned Aerial Vehicles for High-Throughput Phenotyping and Agronomic Research.

Directory of Open Access Journals (Sweden)

Yeyin Shi

Full Text Available Advances in automation and data science have led agriculturists to seek real-time, high-quality, high-volume crop data to accelerate crop improvement through breeding and to optimize agronomic practices. Breeders have recently gained massive data-collection capability in genome sequencing of plants. Faster phenotypic trait data collection and analysis relative to genetic data leads to faster and better selections in crop improvement. Furthermore, faster and higher-resolution crop data collection leads to greater capability for scientists and growers to improve precision-agriculture practices on increasingly larger farms; e.g., site-specific application of water and nutrients. Unmanned aerial vehicles (UAVs have recently gained traction as agricultural data collection systems. Using UAVs for agricultural remote sensing is an innovative technology that differs from traditional remote sensing in more ways than strictly higher-resolution images; it provides many new and unique possibilities, as well as new and unique challenges. Herein we report on processes and lessons learned from year 1-the summer 2015 and winter 2016 growing seasons-of a large multidisciplinary project evaluating UAV images across a range of breeding and agronomic research trials on a large research farm. Included are team and project planning, UAV and sensor selection and integration, and data collection and analysis workflow. The study involved many crops and both breeding plots and agronomic fields. The project's goal was to develop methods for UAVs to collect high-quality, high-volume crop data with fast turnaround time to field scientists. The project included five teams: Administration, Flight Operations, Sensors, Data Management, and Field Research. Four case studies involving multiple crops in breeding and agronomic applications add practical descriptive detail. Lessons learned include critical information on sensors, air vehicles, and configuration parameters for both

Agronomic Challenges and Opportunities for Smallholder Terrace Agriculture in Developing Countries.

Science.gov (United States)

Chapagain, Tejendra; Raizada, Manish N

2017-01-01

Improving land productivity is essential to meet increasing food and forage demands in hillside and mountain communities. Tens of millions of smallholder terrace farmers in Asia, Africa, and Latin America who earn $1-2 per day do not have access to peer-reviewed knowledge of best agronomic practices, though they have considerable traditional ecological knowledge. Terrace farmers also lack access to affordable farm tools and inputs required to increase crop yields. The objectives of this review are to highlight the agronomic challenges of terrace farming, and offer innovative, low-cost solutions to intensify terrace agriculture while improving local livelihoods. The article focuses on smallholder farmers in developing nations, with particular reference to Nepal. The challenges of terrace agriculture in these regions include lack of quality land area for agriculture, erosion and loss of soil fertility, low yield, poor access to agricultural inputs and services, lack of mechanization, labor shortages, poverty, and illiteracy. Agronomic strategies that could help address these concerns include intensification of terraces using agro-ecological approaches along with introduction of light-weight, low-cost, and purchasable tools and affordable inputs that enhance productivity and reduce female drudgery. To package, deliver, and share these technologies with remote hillside communities, effective scaling up models are required. One opportunity to enable distribution of these products could be to "piggy-back" onto pre-existing snackfood/cigarette/alcohol distribution networks that are prevalent even in the most remote mountainous regions of the world. Such strategies, practices, and tools could be supported by formalized government policies dedicated to the well-being of terrace farmers and ecosystems, to maintain resiliency at a time of alarming climate change. We hope this review will inform governments, non-governmental organizations, and the private sector to draw

Principal Component Analysis of Some Quantitative and Qualitative Traits in Iranian Spinach Landraces

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Mohebodini Mehdi

2017-08-01

Full Text Available Landraces of spinach in Iran have not been sufficiently characterised for their morpho-agronomic traits. Such characterisation would be helpful in the development of new genetically improved cultivars. In this study 54 spinach accessions collected from the major spinach growing areas of Iran were evaluated to determine their phenotypic diversity profile of spinach genotypes on the basis of 10 quantitative and 9 qualitative morpho-agronomic traits. High coefficients of variation were recorded in some quantitative traits (dry yield and leaf area and all of the qualitative traits. Using principal component analysis, the first four principal components with eigen-values more than 1 contributed 87% of the variability among accessions for quantitative traits, whereas the first four principal components with eigen-values more than 0.8 contributed 79% of the variability among accessions for qualitative traits. The most important relations observed on the first two principal components were a strong positive association between leaf width and petiole length; between leaf length and leaf numbers in flowering; and among fresh yield, dry yield and petiole diameter; a near zero correlation between days to flowering with leaf width and petiole length. Prickly seeds, high percentage of female plants, smooth leaf texture, high numbers of leaves at flowering, greygreen leaves, erect petiole attitude and long petiole length are important characters for spinach breeding programmes.

Tracing QTLs for Leaf Blast Resistance and Agronomic Performance of Finger Millet (Eleusine coracana (L. Gaertn. Genotypes through Association Mapping and in silico Comparative Genomics Analyses.

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M Ramakrishnan

Full Text Available Finger millet is one of the small millets with high nutritive value. This crop is vulnerable to blast disease caused by Pyricularia grisea, which occurs annually during rainy and winter seasons. Leaf blast occurs at early crop stage and is highly damaging. Mapping of resistance genes and other quantitative trait loci (QTLs for agronomic performance can be of great use for improving finger millet genotypes. Evaluation of one hundred and twenty-eight finger millet genotypes in natural field conditions revealed that leaf blast caused severe setback on agronomic performance for susceptible genotypes, most significant traits being plant height and root length. Plant height was reduced under disease severity while root length was increased. Among the genotypes, IE4795 showed superior response in terms of both disease resistance and better agronomic performance. A total of seven unambiguous QTLs were found to be associated with various agronomic traits including leaf blast resistance by association mapping analysis. The markers, UGEP101 and UGEP95, were strongly associated with blast resistance. UGEP98 was associated with tiller number and UGEP9 was associated with root length and seed yield. Cross species validation of markers revealed that 12 candidate genes were associated with 8 QTLs in the genomes of grass species such as rice, foxtail millet, maize, Brachypodium stacei, B. distachyon, Panicum hallii and switchgrass. Several candidate genes were found proximal to orthologous sequences of the identified QTLs such as 1,4-β-glucanase for leaf blast resistance, cytokinin dehydrogenase (CKX for tiller production, calmodulin (CaM binding protein for seed yield and pectin methylesterase inhibitor (PMEI for root growth and development. Most of these QTLs and their putatively associated candidate genes are reported for first time in finger millet. On validation, these novel QTLs may be utilized in future for marker assisted breeding for the development of

Tracing QTLs for Leaf Blast Resistance and Agronomic Performance of Finger Millet (Eleusine coracana (L.) Gaertn.) Genotypes through Association Mapping and in silico Comparative Genomics Analyses.

Science.gov (United States)

Ramakrishnan, M; Antony Ceasar, S; Duraipandiyan, V; Vinod, K K; Kalpana, Krishnan; Al-Dhabi, N A; Ignacimuthu, S

2016-01-01

Finger millet is one of the small millets with high nutritive value. This crop is vulnerable to blast disease caused by Pyricularia grisea, which occurs annually during rainy and winter seasons. Leaf blast occurs at early crop stage and is highly damaging. Mapping of resistance genes and other quantitative trait loci (QTLs) for agronomic performance can be of great use for improving finger millet genotypes. Evaluation of one hundred and twenty-eight finger millet genotypes in natural field conditions revealed that leaf blast caused severe setback on agronomic performance for susceptible genotypes, most significant traits being plant height and root length. Plant height was reduced under disease severity while root length was increased. Among the genotypes, IE4795 showed superior response in terms of both disease resistance and better agronomic performance. A total of seven unambiguous QTLs were found to be associated with various agronomic traits including leaf blast resistance by association mapping analysis. The markers, UGEP101 and UGEP95, were strongly associated with blast resistance. UGEP98 was associated with tiller number and UGEP9 was associated with root length and seed yield. Cross species validation of markers revealed that 12 candidate genes were associated with 8 QTLs in the genomes of grass species such as rice, foxtail millet, maize, Brachypodium stacei, B. distachyon, Panicum hallii and switchgrass. Several candidate genes were found proximal to orthologous sequences of the identified QTLs such as 1,4-β-glucanase for leaf blast resistance, cytokinin dehydrogenase (CKX) for tiller production, calmodulin (CaM) binding protein for seed yield and pectin methylesterase inhibitor (PMEI) for root growth and development. Most of these QTLs and their putatively associated candidate genes are reported for first time in finger millet. On validation, these novel QTLs may be utilized in future for marker assisted breeding for the development of fungal

Diallel analysis of maize hybrids for agronomic and bromatological forage traits

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Matheus Henrique Silveira Mendes

2015-05-01

Full Text Available The aim of this study was to evaluate a diallel of maize hybrids for traits related to forage production and nutritional value. Six commercial hybrids were used as parents. The crosses were made according to a complete diallel design, obtaining the F1 and reciprocal crosses. The evaluations were performed in the main and second crop seasons in the 2010/2011 crop year at the Center for Technological Development in Agriculture of the Federal University of Lavras, located in Lavras, Minas Gerais State, Brazil. The experimental precision indicated by the coefficient of variation was good for all the traits measured. Significant differences were not observed among the crosses for traits related to the nutritional value of the forage. For fresh matter yield and dehusked ear yield, the general combining ability (GCA and specific combining ability (SCA effects were significant. Sowing in the second crop season reduced the yield and nutritional value of the forage. The interaction among the crosses and sowing seasons was not significant. For the beginning of an intrapopulational breeding program, the parent BM 3061 stands out by showing high estimates of GCA for the grain and forage yields.

morphological and agronomic traits variations for mungbean variety

African Journals Online (AJOL)

ACSS

environment interaction (GEI) was significant (P < 0.001) for all the traits, indicating inconsistent ... and Principal Component Analysis (PCA) revealed narrow diversity in the mungbean collection. ... Mungbean protein and carbohydrates.

Genetic divergence of the common bean (Phaseolus vulgaris L.) group Carioca using morpho-agronomic traits by multivariate analysis.

Science.gov (United States)

Gonçalves Ceolin, Ana Cristina; Gonçalves-Vidigal, Maria Celeste; Soares Vidigal Filho, Pedro; Vinícius Kvitschal, Marcus; Gonela, Adriana; Alberto Scapim, Carlos

2007-03-01

The objective of this study was to evaluate the genetic divergence among the common bean group Carioca by the Tocher method (based on Mahalanobis distance) and graphic dispersion of canonic variables, aiming to identify populations with wide genetic variability. Eighteen genotypes were evaluated in four seasons using a randomized block design with four replications. The mean weight of 100 seeds, in three experiments, and the mean number of pods per plant, in one experiment, were the most important characteristics for the genetic divergence, representing more than 46% of the total variation in the first canonic variable. The first two canonic variables were sufficient to explain about 88.23% of the total variation observed in the average of the four environments. The results showed that CNFC 8008 and CNFC 8009 genotypes presented the best yield averages in all the experiments. While Pérola, Princesa and CNFC 8005 cultivars were the most dissimilar for morpho-agronomic traits. Therefore, the combinations of PérolaxCNFC 8008, CNFC 8005xCNFC 8009, PérolaxCNFC 8009, PrincesaxCNFC 8008 and PrincesaxCNFC 8009 were indicated for interpopulational breeding.

QTLs associated with agronomic traits in the Attila × CDC Go spring wheat population evaluated under conventional management.

Directory of Open Access Journals (Sweden)

Jun Zou

Full Text Available Recently, we investigated the effect of the wheat 90K single nucleotide polymorphic (SNP array and three gene-specific (Ppd-D1, Vrn-A1 and Rht-B1 markers on quantitative trait loci (QTL detection in a recombinant inbred lines (RILs population derived from a cross between two spring wheat (Triticum aestivum L. cultivars, 'Attila' and 'CDC Go', and evaluated for eight agronomic traits at three environments under organic management. The objectives of the present study were to investigate the effect of conventional management on QTL detection in the same mapping population using the same set of markers as the organic management and compare the results with organic management. Here, we evaluated 167 RILs for number of tillers (tillering, flowering time, maturity, plant height, test weight (grain volume weight, 1000 kernel weight, grain yield, and grain protein content at seven conventionally managed environments from 2008 to 2014. Using inclusive composite interval mapping (ICIM on phenotypic data averaged across seven environments and a subset of 1203 informative markers (1200 SNPs and 3 gene specific markers, we identified a total of 14 QTLs associated with flowering time (1, maturity (2, plant height (1, grain yield (1, test weight (2, kernel weight (4, tillering (1 and grain protein content (2. Each QTL individually explained from 6.1 to 18.4% of the phenotypic variance. Overall, the QTLs associated with each trait explained from 9.7 to 35.4% of the phenotypic and from 22.1 to 90.8% of the genetic variance. Three chromosomal regions on chromosomes 2D (61-66 cM, 4B (80-82 cM and 5A (296-297 cM harbored clusters of QTLs associated with two to three traits. The coincidental region on chromosome 5A harbored QTL clusters for both flowering and maturity time, and mapped about 2 cM proximal to the Vrn-A1 gene, which was in high linkage disequilibrium (0.70 ≤ r2 ≤ 0.75 with SNP markers that mapped within the QTL confidence interval. Six of the 14

Agronomic performance of new open pollinated experimental lines of broccoli (Brassica oleracea L. var. italica evaluated under organic farming.

Directory of Open Access Journals (Sweden)

Samira Sahamishirazi

Full Text Available In order to develop new open pollinating cultivars of broccoli for organic farming, two experiments were conducted during fall 2015 and spring 2016. This study was aimed at comparing the agronomic performance of eleven new open pollinating breeding lines of broccoli to introduce new lines and to test their seasonal suitability for organic farming. Field experiments were carried out at the organic research station Kleinhohenheim of the University of Hohenheim (Stuttgart-Germany. Different agronomic traits total biomass fresh weight, head fresh weight, head diameter, hollow-stem, fresh weight harvest index and marketable yield were assessed together with commercial control cultivars. The data from both experiments were analyzed using a two-stage mixed model approach. In our study, genotype, growing season and their interaction had significant effects on most traits. Plants belonging to the fall growing season had bigger sizes in comparison to spring with significantly (p< 0.0001 higher biomass fresh weight. Some experimental lines had significant lower head fresh weight in spring in comparison to the fall season. The high temperature during the harvest period for the spring season affected the yield negatively through decreasing the firmness of broccoli heads. The low average minimum temperatures during the spring growing season lead to low biomass fresh weight but high fresh weight harvest index. Testing the seasonal suitability of all open pollinating lines showed that the considered fall season was better for broccoli production. However, the change in yield between the fall and the spring growing season was not significant for "Line 701" and "CHE-MIC". Considering the expression of different agronomic traits, "CHE-GRE-G", "Calinaro" and "CAN-SPB" performed the best in the fall growing season, and "CHE-GRE-G", "CHE-GRE-A", "CHE-BAL-A" and "CHE-MIC" and "Line 701" were best in the spring growing season, specifically due to the highest marketable

Empowering breeding programs with new approaches to overcome constraints for selecting superior quality traits of rice

NARCIS (Netherlands)

Calingacion, M.N.

2015-01-01

Empowering breeding programs with new approaches to overcome constraints for selecting superior quality traits of rice

Mariafe N. Calingacion

Most rice breeding programs have focused on improving agronomic traits such as yield, while enhancing grain quality traits

Genetic studies for some agronomic traits in spring wheat under heat stress

International Nuclear Information System (INIS)

Irshad, M.; Khaliq, I.; Khan, A.S.

2012-01-01

F1 progenies of 7x7 diallel fashion crosses comprising four high temperatures tolerant and three susceptible spring wheat parental genotypes were evaluated under normal and heat stress conditions. The characters days to heading, spike index at anthesis, plant height, spikes per plant, spikelets per spike and grain yield per plant were studied under both conditions. Analysis of variance under both conditions indicated additive gene action with partial dominance suggesting that these traits might be useful for the development of terminal heat tolerant varieties by modified pedigree selection.. However overdominance type of gene action was recorded for spikelets per spike suggesting that further improvement in this trait may be effected by biparental mating coupled with few cycles of recurrent selection. (author)

Genetic studies for some agronomic traits in spring wheat under heat stress

International Nuclear Information System (INIS)

Irshad, M.; Khaliq, I.; Khan, A.S.; Ali, A.

2012-01-01

F/sub 1/ progenies of 7 X 7 diallel fashion crosses comprising four high temperatures tolerant and three susceptible spring wheat parental genotypes were evaluated under normal and heat stress conditions. The characters days to heading, spike index at anthesis, plant height, spikes per plant, spikelets per spike and grain yield per plant were studied under both conditions. Analysis of variance under both conditions indicated additive gene action with partial dominance suggesting that these traits might be useful for the development of terminal heat tolerant varieties by modified pedigree selection. However over-dominance type of gene action was recorded for spikelets per spike suggesting that further improvement in this trait may be effected by biparental mating coupled with few cycles of recurrent selection. (author)

Estimation of fruit weight by cane traits for various raspberries ...

African Journals Online (AJOL)

STORAGESEVER

2008-09-03

Sep 3, 2008 ... each cultivar and determine the cane trait(s) with the positive and negative effect among these ... potassium (K2O) with soil pH of 7.2 in distilled water (1.5 v/v). Agronomic observations were recorded for ... Multiple Regression Model must be the highest determination coefficient, but the lowest RMSE value.

Global value of GM rice: a review of expected agronomic and consumer benefits.

Science.gov (United States)

Demont, Matty; Stein, Alexander J

2013-06-25

Unlike the other major crops, no genetically modified (GM) varieties of rice have been commercialized at a large scale. Within the next 2-3 years new transgenic rice varieties could be ready for regulatory approval and subsequent commercialization, though. Given the importance of rice as staple crop for many of the world's poorest people, this will have implications for the alleviation of poverty, hunger and malnutrition. Thus, policy-makers need to be aware of the potential benefits of GM rice. We provide an overview of the literature and discuss the evidence on expected agronomic and consumer benefits of genetically engineered rice. We find that while GM rice with improved agronomic traits could deliver benefits similar to already commercialized biotechnology crops, expected benefits of consumer traits could be higher by an order of magnitude. By aggregating the expected annual benefits, we estimate the global value of GM rice to be US$64 billion per year. This is only an indicative value, as more GM varieties will become available in future. Nevertheless, such a figure can help guide policy-makers when deciding on the approval or funding of biotechnology crops and it may also raise awareness among consumers about what is at stake for their societies. Copyright © 2013 Elsevier B.V. All rights reserved.

Allelic variations of a light harvesting chlorophyll a/b-binding protein gene (Lhcb1 associated with agronomic traits in barley.

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Yanshi Xia

Full Text Available Light-harvesting chlorophyll a/b-binding protein (LHCP is one of the most abundant chloroplast proteins in plants. Its main function is to collect and transfer light energy to photosynthetic reaction centers. However, the roles of different LHCPs in light-harvesting antenna systems remain obscure. Exploration of nucleotide variation in the genes encoding LHCP can facilitate a better understanding of the functions of LHCP. In this study, nucleotide variations in Lhcb1, a LHCP gene in barley, were investigated across 292 barley accessions collected from 35 different countries using EcoTILLING technology, a variation of the Targeting Induced Local Lesions In Genomes (TILLING. A total of 23 nucleotide variations were detected including three insert/deletions (indels and 20 single nucleotide polymorphisms (SNPs. Among them, 17 SNPs were in the coding region with nine missense changes. Two SNPs with missense changes are predicted to be deleterious to protein function. Seventeen SNP formed 31 distinguishable haplotypes in the barley collection. The levels of nucleotide diversity in the Lhcb1 locus differed markedly with geographic origins and species of accessions. The accessions from Middle East Asia exhibited the highest nucleotide and haplotype diversity. H. spontaneum showed greater nucleotide diversity than H. vulgare. Five SNPs in Lhcb1 were significantly associated with at least one of the six agronomic traits evaluated, namely plant height, spike length, number of grains per spike, thousand grain weight, flag leaf area and leaf color, and these SNPs may be used as potential markers for improvement of these barley traits.

Distribution of Phenolic Compounds and Antioxidative Activities of Rice Kernel and Their Relationships with Agronomic Practice

Science.gov (United States)

Kesarwani, Amit; Chiang, Po-Yuan; Chen, Shih-Shiung

2014-01-01

The phenolic and antioxidant activity of ethanolic extract of two Japonica rice cultivars, Taikeng no. 16 (medium and slender grain) and Kaohsiung no. 139 (short and round grain), grown under organic and conventional farming were examined. Analyses shows that Kaohsiung no. 139 contains the highest amount of secondary metabolites and continuous farming can increase its production. Results also suggest that phenolic content under different agronomic practices, has not shown significant differences but organically grown rice has proven to be better in higher accumulation of other secondary metabolites (2,2-diphenyl-1-picrylhydrazyl (DPPH), flavonoid content, and ferrous chelating capacity). In nutshell, genetic traits and environment have significant effect on phenolic compounds and the least variation reported under agronomic practices. PMID:25506072

Distribution of Phenolic Compounds and Antioxidative Activities of Rice Kernel and Their Relationships with Agronomic Practice

Directory of Open Access Journals (Sweden)

Amit Kesarwani

2014-01-01

Full Text Available The phenolic and antioxidant activity of ethanolic extract of two Japonica rice cultivars, Taikeng no. 16 (medium and slender grain and Kaohsiung no. 139 (short and round grain, grown under organic and conventional farming were examined. Analyses shows that Kaohsiung no. 139 contains the highest amount of secondary metabolites and continuous farming can increase its production. Results also suggest that phenolic content under different agronomic practices, has not shown significant differences but organically grown rice has proven to be better in higher accumulation of other secondary metabolites (2,2-diphenyl-1-picrylhydrazyl (DPPH, flavonoid content, and ferrous chelating capacity. In nutshell, genetic traits and environment have significant effect on phenolic compounds and the least variation reported under agronomic practices.

抗灰斑病大豆品种农艺性状、品质性状与产量性状的典型相关分析%Canonical Correlation Analysis for Agronomic Trait Group, Quality Trait Group and Yield in Soybean Immune to Grey Speck Disease

Institute of Scientific and Technical Information of China (English)

于凤瑶; 辛秀珺; 张代军; 周顺启

2012-01-01

To study the relationship between agronomic trait groups yield and quality trait groups of grey speck immune soybean, Canonical correlation analysis in 17 soybean cultivars and the establishment of a comprehensive selection index for yield are reported in this paper. The result showed that: the most important factors for seed yield are yield group's seed per plant, 3-seed pod, pods per plant; agronomic trait group's growth period, knot per plant and plant height, agronomic character and yield group are positively correlated. Growth days and 100-seed weight are positively correlated, bottom pod height and 4-seed pod are negatively correlated; canonical correlation coefficient between agronomic character and quality group has reached the significant level; growth days and protein content are positively correlated, middle height plant, moderate grow period, more knots per plant, low pod position, middle seed, more seed per plant in yield character should be chose as breeding goal, protein content can be improved by selection of grow days and 100-seed weight character.%为了探究抗灰斑病大豆品种农艺性状、产量性状、品质性状间的相互关系,选用了近年黑龙江省审定的17个抗灰斑病的大豆品种为试验材料,对其各性状及性状组基因型值进行相关与典型相关分析,并建立了以产量性状为目标的各性状选择指数.结果表明:对单株产量影响最大的是产量性状组的单株粒数、3粒荚数、单株荚数；农艺性状组的生育期、单株节数及株高,农艺性状与产量性状组间以正相关为主；生育日数与百粒重呈正相关、底荚高与4粒荚数呈负相关；品质性状与农艺性状组间典型相关系数达显著水平；且生育日数与蛋白质含量呈正相关,产量性状的选择应以株高中等、生育期适中、单株多有效节数、较低的结荚部位、粒中等大、单株粒数多为选育目标,蛋白质含量的提高可通过生育日数及百粒重等性状间接达到.

Genetic analysis of some agronomic traits in groundnut (Arachis hypogaea L.

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M.K. Alam

2013-12-01

Full Text Available A 10×10 half diallel experiment was conducted on groundnut (Arachis hypogaea L. to ascertain the gene action and genetic parameters of ten traits including 50% flowering, no. of pods per plant, plant height, harvest index, pod index, 100 pod weight, 100 kernel weight, pod size, diseases infection and yield per plot. The experiments were carried out in the Department of Genetics and Plant Breeding, Bangladesh Agricultural University (BAU, Mymensingh during the cropping season of 2010-2011. The estimates of gene effects indicated that significance of both additive and non-additive variance for pod size, 100 pod weight and diseases infection among the traits and presence of over dominance satisfying assumptions of diallel except dormancy. However, both the additive and non-additive gene affects together importance to control of most quantitative traits in the groundnut. The average degree of dominance (H1/D 1/2 (H1 = dominance variance, D = additive variance was higher than one, indicating over dominance for all the traits. The narrow-sense heritability was high for 50% flowering (38%, harvest index (35%, pod size (52%, 100 pod weight (35% and yield per plot (41% indicating that great genetic gain could be achieved for them.

Comparative Agronomic Performance and Reaction to Fusarium wilt of Lens culinaris × L. orientalis and L. culinaris × L. ervoides derivatives

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Mohar Singh

2017-07-01

Full Text Available The development of transgressive phenotype in the segregating populations has been speculated to contribute to niche divergence of hybrid lineages, which occurs most frequently at larger genetic distances. Wild Lens species are considered to be more resistant against major biotic and abiotic stresses than that of the cultivated species. In the present study, we assessed the comparative agronomic performance of lentil (Lens culinaris subsp. culinaris inter-sub-specific (L. culinaris subsp. orientalis and interspecific (L. ervoides derivatives, also discussed its probable basis of occurrence. The F3, F4, and F5 inter sub-specific and interspecific populations of ILL8006 × ILWL62 and ILL10829 × ILWL30, respectively revealed a substantial range of variation for majority of agro-morphological traits as reflected by the range, mean and coefficient of variation. A high level of fruitful heterosis was also observed in F3 and F4 progeny for important traits of interest. Phenotypic coefficient of variation (PCV was higher in magnitude than genotypic coefficient of variation (GCV in all generations for several quantitative characters. The results showed high heritability estimates for majority of traits in conjunction with low to high genetic advance in F3 and F4 generations. Further, F5 progeny of ILL10829 × ILWL30, manifested resistant disease reaction for fifteen recombinant inbred lines (RILs against (Fusarium oxysporum f. sp. lentis (Vasd. Srin. Gord.. The multilocation agronomic evaluation of both crosses showed better results for earliness, desirable seed yield and Fusarium wilt resistance under two agro-ecological regions of north-western India. These better performing recombinants of ILL8006 × ILWL62 and ILL10829 × ILWL30 can be advanced for further genetic improvement and developing high yielding disease resistant cultivars of lentil.

Photo-biotechnology as a tool to improve agronomic traits in crops.

Science.gov (United States)

Gururani, Mayank Anand; Ganesan, Markkandan; Song, Pill-Soon

2015-01-01

Phytochromes are photosensory phosphoproteins with crucial roles in plant developmental responses to light. Functional studies of individual phytochromes have revealed their distinct roles in the plant's life cycle. Given the importance of phytochromes in key plant developmental processes, genetically manipulating phytochrome expression offers a promising approach to crop improvement. Photo-biotechnology refers to the transgenic expression of phytochrome transgenes or variants of such transgenes. Several studies have indicated that crop cultivars can be improved by modulating the expression of phytochrome genes. The improved traits include enhanced yield, improved grass quality, shade-tolerance, and stress resistance. In this review, we discuss the transgenic expression of phytochrome A and its hyperactive mutant (Ser599Ala-PhyA) in selected crops, such as Zoysia japonica (Japanese lawn grass), Agrostis stolonifera (creeping bentgrass), Oryza sativa (rice), Solanum tuberosum (potato), and Ipomea batatas (sweet potato). The transgenic expression of PhyA and its mutant in various plant species imparts biotechnologically useful traits. Here, we highlight recent advances in the field of photo-biotechnology and review the results of studies in which phytochromes or variants of phytochromes were transgenically expressed in various plant species. We conclude that photo-biotechnology offers an excellent platform for developing crops with improved properties. Copyright © 2014 Elsevier Inc. All rights reserved.

Effect of Biological and Chemical Fertilizers on Oil, Seed Yield and some Agronomic Traits of Safflower under Different Irrigation Regimes

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Hamidreza Fanaei

2017-08-01

Full Text Available Introduction Safflower Carthamus tinctorius L. is a tolerant plant to water deficit due to long roots and capability for high water absorption from soil deeper parts. Safflower can growth successfully in regions with low soil fertility and temperature. Behdani and Mosavifar (2011 reported that drought stress affect on yield by reducing yield components and agronomic traits. Biofertilizer during a biological process chanced the nutrients from unusable to usable form for plants in soils (Aseretal, 2008. Mirzakhani et al. (2008 found that inoculation of seed with free-living bacterium azotobacter and a symbiotic fungus productive mycorrhiza addition to increasing oil and seed cause increasing resistance against two factors of unfavorable environmental and to improve quality of product. In order to study the effect of biological and chemical fertilizers on oil, seed yield and some of agronomic traits of Safflower under irrigation of different regimes an experimental design was conducted. Materials and methods In order to study the effect of biological and chemical fertilizers on oil, seed yield and some of agronomic traits of safflower under irrigation of different regimes an experiment was carried out split plot based on randomized complete block design (RCBD with three replications in experimental farm of payame-Noor university of Zabol during 2012-2013 growing season. Irrigation regime in three levels include: I1 (control irrigation in all growth stages, I2 stop irrigation from sowing to flowering (irrigation in growth stages flowering, and seed filling, I3 irrigation in growth stages rosset, stem elongation, heading and stop irrigation in flowering, and seed filling were as main plots and fertilizer resources in five levels included: F1 non application chemical fertilizer (control, F2 pure application chemical fertilizer (NPK 99, 44 and 123 kg.ha-1 respectively, F3 Nitroxin application (2 L.ha-1 F4 Azotobacter application (2 L.ha-1 and F5

Correlation and path analysis of grain yield and morphological traits in test–cross populations of maize

NARCIS (Netherlands)

Sreckov, Z.; Nastasic, A.; Bocanski, J.; Djalovic, I.; Vukosavljev, M.; Jockovic, B.

2011-01-01

One of the goals of this paper was to determine correlation between grain yield, like the most important agronomic trait, and traits of the plant and ear that are influencing on the grain yield, in two test-cross populations, which are formed by crossing progenies of NSU(1) population after 17

Segregation of vegetative and reproductive traits associated with ...

African Journals Online (AJOL)

In this study, an F1 mapping population (AM1) of D. alata, exhibited segregation for both tuber yield- and quality- related traits when evaluated in the field for 12 agronomic characters: days to shoot emergence, number of primary vines per plant, days to flowering, flower sex, flowering intensity, days to tuber initiation, number ...

Molecular and Morpho-Agronomical Characterization of Root Architecture at Seedling and Reproductive Stages for Drought Tolerance in Wheat

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Vinod; Naik, Bhojaraja K.; Chand, Suresh; Deshmukh, Rupesh; Mallick, Niharika; Singh, Sanjay; Singh, Nagendra Kumar; Tomar, S. M. S.

2016-01-01

Water availability is a major limiting factor for wheat (Triticum aestivum L.) production in rain-fed agricultural systems worldwide. Root architecture is important for water and nutrition acquisition for all crops, including wheat. A set of 158 diverse wheat genotypes of Australian (72) and Indian (86) origin were studied for morpho-agronomical traits in field under irrigated and drought stress conditions during 2010–11 and 2011-12.Out of these 31 Indian wheat genotypes comprising 28 hexaploid (Triticum aestivum L.) and 3 tetraploid (T. durum) were characterized for root traits at reproductive stage in polyvinyl chloride (PVC) pipes. Roots of drought tolerant genotypes grew upto137cm (C306) as compared to sensitive one of 63cm with a mean value of 94.8cm. Root architecture traits of four drought tolerant (C306, HW2004, HD2888 and NI5439) and drought sensitive (HD2877, HD2012, HD2851 and MACS2496) genotypes were also observed at 6 and 9 days old seedling stage. The genotypes did not show any significant variation for root traits except for longer coleoptiles and shoot and higher absorptive surface area in drought tolerant genotypes. The visible evaluation of root images using WinRhizo Tron root scanner of drought tolerant genotype HW2004 indicated compact root system with longer depth while drought sensitive genotype HD2877 exhibited higher horizontal root spread and less depth at reproductive stage. Thirty SSR markers were used to study genetic variation which ranged from 0.12 to 0.77 with an average value of 0.57. The genotypes were categorized into three subgroups as highly tolerant, sensitive, moderately sensitive and tolerant as intermediate group based on UPGMA cluster, STRUCTURE and principal coordinate analyses. The genotypic clustering was positively correlated to grouping based on root and morpho-agronomical traits. The genetic variability identified in current study demonstrated these traits can be used to improve drought tolerance and association

Molecular and Morpho-Agronomical Characterization of Root Architecture at Seedling and Reproductive Stages for Drought Tolerance in Wheat.

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Ram Sewak Singh Tomar

Full Text Available Water availability is a major limiting factor for wheat (Triticum aestivum L. production in rain-fed agricultural systems worldwide. Root architecture is important for water and nutrition acquisition for all crops, including wheat. A set of 158 diverse wheat genotypes of Australian (72 and Indian (86 origin were studied for morpho-agronomical traits in field under irrigated and drought stress conditions during 2010-11 and 2011-12.Out of these 31 Indian wheat genotypes comprising 28 hexaploid (Triticum aestivum L. and 3 tetraploid (T. durum were characterized for root traits at reproductive stage in polyvinyl chloride (PVC pipes. Roots of drought tolerant genotypes grew upto137cm (C306 as compared to sensitive one of 63cm with a mean value of 94.8cm. Root architecture traits of four drought tolerant (C306, HW2004, HD2888 and NI5439 and drought sensitive (HD2877, HD2012, HD2851 and MACS2496 genotypes were also observed at 6 and 9 days old seedling stage. The genotypes did not show any significant variation for root traits except for longer coleoptiles and shoot and higher absorptive surface area in drought tolerant genotypes. The visible evaluation of root images using WinRhizo Tron root scanner of drought tolerant genotype HW2004 indicated compact root system with longer depth while drought sensitive genotype HD2877 exhibited higher horizontal root spread and less depth at reproductive stage. Thirty SSR markers were used to study genetic variation which ranged from 0.12 to 0.77 with an average value of 0.57. The genotypes were categorized into three subgroups as highly tolerant, sensitive, moderately sensitive and tolerant as intermediate group based on UPGMA cluster, STRUCTURE and principal coordinate analyses. The genotypic clustering was positively correlated to grouping based on root and morpho-agronomical traits. The genetic variability identified in current study demonstrated these traits can be used to improve drought tolerance and

Genetic mapping and QTL analysis of agronomic traits in Indian ...

Indian Academy of Sciences (India)

2Department of Plant Breeding, Wagenigen University and Research Centre, 6708 PB Wageningen, The Netherlands ... of the corresponding total phenotypic variation for three qualitative traits have ... soybean, common bean, mung bean and its relatives. It is .... performed following the method described by the authors ear-.

Identification of ISSR and RAPD markers linked to yield traits in bread wheat under normal and drought conditions

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A.G.A. Khaled

2015-12-01

Full Text Available Genetic variability and identification of some molecular markers were studied in twenty promising lines of wheat using agronomic traits, ISSR (inter simple sequences repeats and RAPD (random amplified polymorphic DNA markers. Significant variation was evidenced in all agronomic traits. The lines proved to be superior to the check cultivar Sahel1 in yield and its component traits. Lines L2, L7 and L8 were the best in most yield component traits in both seasons. Moreover, Lines L2, L4, L5, L7 and L8 showed drought tolerance by which they displayed high performance in agronomic traits as well as a low drought susceptibility index. The percentage of polymorphism was 39.3% and 53.2% for ISSRs and RAPDs, respectively. UBC-881 belonged to penta-nucleotide repeat sequences (GGGTG that produced the highest level of polymorphism, while UBC-846 belonged to di-nucleotide repeat sequences (CA that produced the lowest level of polymorphism. Genetic similarities among wheat lines based on ISSR and RAPD markers ranged from 0.81 to 1.00 and from 0.86 to 0.98, respectively. There was a low average of PIC (polymorphism information content values which were 0.10 (ISSR and 0.15 (RAPD. The RAPD technique exhibited a higher marker index (MI = 0.69 compared to ISSR (MI = 0.43. There was insignificant correlation between ISSR and RAPD data (0.168, p > 0.05. There were two markers (UBC-881450bp and OPF-10540bp, on each of which two traits regressed significantly. The associated markers each explained a maximum regression of 18.92–34.95% of the total available variation for individual associated traits.

ALOGAMIA EM ARROZ (Oryza sativa L. E RELAÇÃO COM CARACTERÍSTICAS AGRONÔMICAS RICE (Oryza sativa L. ALLOGAMY AND RELATIONSHIP WITH AGRONOMIC TRAITS

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Péricles de Carvalho Ferreira Neves

2007-09-01

="western" align="justify">Hybrid rice seed production, following the Chinese technique, requires a great amount of hand labor and is expensive. Alternatives to increase the outcrossing rate may help to reduce cost. Embrapa Rice and Beans´ hybrid rice breeding program transferred allogamic traits (anther and stigma lengths from Oryza longistaminata A. Chev. to the cultivated species Oryza sativa L. The objective of this study was to correlate allogamic and agronomic characters. O. longistaminata was crossed to O. sativa and then backcrossed twice to the cultivated line. Twenty five F3:6-derived lines were produced and correlation studies between allogamic (stigma, anther, and spikelet length and agronomic traits (panicle length, sterility, shattering, awn length, plant height, tiller per plant, and panicle exsertion were performed. The experimental design was a randomized complete block with four replications. The trials were sown in two environments within the Embrapa Rice and Beans´ experimental station. In general, there were poor genotypic and phenotypic correlations between allogamic and agronomic traits. Highly significant associations were found between stigma and anther length, stigma and awn length anther and awn length, and panicle length and plant height.

KEY-WORDS: Oryza longistaminata; outcrossing rate; hybrid rice; seed production.

Draft genome sequence of Cicer reticulatum L., the wild progenitor of chickpea provides a resource for agronomic trait improvement.

Science.gov (United States)

Gupta, Sonal; Nawaz, Kashif; Parween, Sabiha; Roy, Riti; Sahu, Kamlesh; Kumar Pole, Anil; Khandal, Hitaishi; Srivastava, Rishi; Kumar Parida, Swarup; Chattopadhyay, Debasis

2017-02-01

Cicer reticulatum L. is the wild progenitor of the fourth most important legume crop chickpea (C. arietinum L.). We assembled short-read sequences into 416 Mb draft genome of C. reticulatum and anchored 78% (327 Mb) of this assembly to eight linkage groups. Genome annotation predicted 25,680 protein-coding genes covering more than 90% of predicted gene space. The genome assembly shared a substantial synteny and conservation of gene orders with the genome of the model legume Medicago truncatula. Resistance gene homologs of wild and domesticated chickpeas showed high sequence homology and conserved synteny. Comparison of gene sequences and nucleotide diversity using 66 wild and domesticated chickpea accessions suggested that the desi type chickpea was genetically closer to the wild species than the kabuli type. Comparative analyses predicted gene flow between the wild and the cultivated species during domestication. Molecular diversity and population genetic structure determination using 15,096 genome-wide single nucleotide polymorphisms revealed an admixed domestication pattern among cultivated (desi and kabuli) and wild chickpea accessions belonging to three population groups reflecting significant influence of parentage or geographical origin for their cultivar-specific population classification. The assembly and the polymorphic sequence resources presented here would facilitate the study of chickpea domestication and targeted use of wild Cicer germplasms for agronomic trait improvement in chickpea. © The Author 2016. Published by Oxford University Press on behalf of Kazusa DNA Research Institute.

Development of root morphology traits of the Czech lucerne varieties in chernozem over a three year period

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Josef Hakl

2012-01-01

Full Text Available The root system of plants is generally in relation to important agronomic and ecological characteristics. The aim of this study was to investigate differences in root morphology development of Czech lucerne varieties under chernozem soil conditions. In spring 2007, a field experiment with ten Czech lucerne varieties was established with a regular space of 125 mm between the rows. During the 2008–2010 period, the plants were sampled every autumn after the last cut in five blocks per each variety; the size of the sampling area was 50 × 50 cm and average depth of sampling was 0.25 m. All varieties provided similar trend in root morphology development but some differences could be detected in the rate of this development. From all evaluated root traits, these differences were connected mainly with tap-root diameter, intensity of root branching and lateral root number. Advisable varieties should provide higher density of plant together with higher root diameter and branching which is resulted to higher root weight per m2 and consequently to higher stand productivity. The root-branched plants achieved a significantly higher tap-root diameter of 10.7 mm in comparison with unbranched-root plants with 7.1 mm. Except of plant age, the stand density and tap-root diameter could be considered as a parameter to drive lucerne root morphology development. Within a year, the increase of tap-root diameter was connected with increase of root branching at root-branched plants whilst decrease of plant density caused the beginning of the process of root branching at tap-rooted plants. The range of root traits influenced themselves so their joint presentation is advisable. It must be remembered that soil conditions are a factor which strongly modified the root morphology traits; therefore, these results must be completed with other experiments under various soil conditions. The knowledge of root morphology traits could contribute to the assessment of

Agronomic traits and deoxynivalenol contamination of two tetraploid wheat species (Triticum turgidum spp. durum, Triticum turgidum spp. turanicum grown strictly under low input conditions

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Giovanni Dinelli

2014-09-01

Full Text Available An evaluation of the agronomic performance of two tetraploid wheat varieties (Triticum turgidum spp. durum, Claudio; Triticum turgidum spp. turanicum, Kamut® grown strictly under low input conditions was carried out over three consecutive cropping years. The study reported grain yield values ranging from 1.8 to 2.6 t ha-1. Productivity showed to be primarily affected by environmental conditions, while no differences were observed between the two genotypes. The study of the yield components highlighted that the durum wheat variety had a higher plant density than Kamut®, but this discrepancy was offset by a greater number of kernels per spike and the kernel weight of khorasan wheat. The investigated wheat genotypes were also analysed to assess the mycotoxin (DON levels of wholegrain semolina and the efficiency of cleaning treatments to reduce contamination. Results showed that both wheat varieties had a good hygienic and sanitary quality with a DON content ranging from 0.35 to 1.31 mg kg-1, which was lower than the maximum acceptable level set by the European regulation at 1.75 mg kg-1. In addition, our research work investigated the effects of premilling cleaning procedures, such as water washing and brushing, on mycotoxin levels, which yielded interesting results in terms of decontamination efficiency. These methods were particularly efficient with Kamut® semolina (46-93% DON reduction, suggesting that mycotoxins accumulate in this variety at more superficial levels than in the durum wheat variety. On the whole, our study provided additional knowledge on the traits to be further improved to respond to low input requirements and to enhance the potential adaptability of wheat genotypes to organic agriculture. Our results emphasized the need to develop wheat varieties that can provide adequate performance without high levels of nitrogen inputs by selecting specific traits, such as kernel weight, spike length and kernel/spike. This may help

Zinc, nitrogen and salinity interaction on agronomic traits and some ...

African Journals Online (AJOL)

use

2011-11-23

Nov 23, 2011 ... percentage decreased due to nitrogen, zinc and salinity in the first year but .... Analysis of variance on canola traits affected by nitrogen, zinc and salinity at ...... a result less of the latter are available for fat synthesis ... Na+ and Cl- in plant tissues, effects of nitrogen and zinc ... Zinc alleviates cadmium-induced.

Evaluation of Effect of Gamma Rays Irradiation for Increasing of Variation in Germination and Agronomic Traits in Oilseed rape (Brassica napus L.

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R. Momeni

2012-04-01

Full Text Available Increasing of genetic diversity is one of primary and basic goals of plant breeding programs. Induction of mutation is a method to increase genetic diversity that can be used in accommodate with selection, recombination and or combination of them in plant breeding. The aim of this study was to investigate the impact of different doses of gamma rays (500, 700, 900, 1100 and 1300 Gry on primary growth characters, such as: rate and percentage of germination, the length of rootlet and stemlet in M1 generation, and on agronomic characters such as: plant height, number of lateral branches, number of pods on main and lateral stem, length of pods and weigth of 1000-seed in M2 generation for two varieties of oilseed rape (Brassica napus, PF and Zarfam. Results of lab experiments showed that for both varieties, the germination percentage, the length of rootlet and the length of stemlet were significantly decreased by mutagen in compare with the control. While germination rate was only significantly affected by mutagen in PF. The estimation of "F" showed that there was significant difference between the variance of treatments for the germination rate and germination percentage in PF cultivar and for germination rate and stemlet length in Zarfam cultivar. In fact, increasing of gamma doses causes considerable enhancement in variance of treatment in compare with the control. The maximum relative coefficient of variation was related to 1300 Gry for germination rate of PF. In M2, all traits of study except number of pods on main stem was decreased by different doses of Gamma rays in PF cultivar. In opposition to other traits, Pods on main stem in PF cultivar was increased in different doses of gamma ray in compare with the control. But in Zarfam cultivar, only 1000-seed weight was significantly affected by Gamma rays.

Developing Leadership Traits.

Science.gov (United States)

Hall, Susan King

1980-01-01

Defines six leadership traits that are necessary to and fostered by editing a college newspaper: delegating authority, developing subordinates, motivating others, being approachable, commanding respect, and bringing out optimum performances in others. (TJ)

RELATIONSHIP BETWEEN DIFFERENT ALLOGAMIC ASSOCIATED TRAIT CHARACTERISTICS OF THE FIVE NEWLY DEVELOPED CYTOPLASMIC MALE STERILE (CMS LINES IN RICE

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Nematzadeh GHORBAN ALI

2006-10-01

Full Text Available Five suitable maintainer varieties were identifi ed through testcrosses with IR58025A and the transfer of wild abortive cytoplasm was carried out by seven successive backcrosses. Five new CMS lines were developed by this approach in well adapted high yielding improved varietal background such as ‘Nemat’, ‘Neda’, ‘Dasht’, ‘Amol3’ and ‘Champa’. Agronomical characterization and allogamy-associated traits of the fi ve newly developed CMS lines were studied for their interrelationship. Anther length had a signifi cant positive correlation with the duration of glume opening (0.759 and high correlation of (0.698 with the angle between lemma and palea. The results indicated that ‘Nemat’ A, ‘Neda’ A, ‘Dasht’ A are more suitable as parents for hybrid seed production due to their favorable and superior fl oral characteristics in comparison to IR58025A.

Comparison of whole-genome prediction models for traits with contrasting genetic architecture in a diversity panel of maize inbred lines

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Riedelsheimer Christian

2012-09-01

Full Text Available Abstract Background There is increasing empirical evidence that whole-genome prediction (WGP is a powerful tool for predicting line and hybrid performance in maize. However, there is a lack of knowledge about the sensitivity of WGP models towards the genetic architecture of the trait. Whereas previous studies exclusively focused on highly polygenic traits, important agronomic traits such as disease resistances, nutrifunctional or climate adaptational traits have a genetic architecture which is either much less complex or unknown. For such cases, information about model robustness and guidelines for model selection are lacking. Here, we compared five WGP models with different assumptions about the distribution of the underlying genetic effects. As contrasting model traits, we chose three highly polygenic agronomic traits and three metabolites each with a major QTL explaining 22 to 30% of the genetic variance in a panel of 289 diverse maize inbred lines genotyped with 56,110 SNPs. Results We found the five WGP models to be remarkable robust towards trait architecture with the largest differences in prediction accuracies ranging between 0.05 and 0.14 for the same trait, most likely as the result of the high level of linkage disequilibrium prevailing in elite maize germplasm. Whereas RR-BLUP performed best for the agronomic traits, it was inferior to LASSO or elastic net for the three metabolites. We found the approach of genome partitioning of genetic variance, first applied in human genetics, as useful in guiding the breeder which model to choose, if prior knowledge of the trait architecture is lacking. Conclusions Our results suggest that in diverse germplasm of elite maize inbred lines with a high level of LD, WGP models differ only slightly in their accuracies, irrespective of the number and effects of QTL found in previous linkage or association mapping studies. However, small gains in prediction accuracies can be achieved if the WGP model is

Genetic and agronomic assessment of cob traits in corn under low and normal nitrogen management conditions.

Science.gov (United States)

Jansen, Constantin; Zhang, Yongzhong; Liu, Hongjun; Gonzalez-Portilla, Pedro J; Lauter, Nick; Kumar, Bharath; Trucillo-Silva, Ignacio; Martin, Juan Pablo San; Lee, Michael; Simcox, Kevin; Schussler, Jeff; Dhugga, Kanwarpal; Lübberstedt, Thomas

2015-07-01

Exploring and understanding the genetic basis of cob biomass in relation to grain yield under varying nitrogen management regimes will help breeders to develop dual-purpose maize. With rising energy demands and costs for fossil fuels, alternative energy from renewable sources such as maize cobs will become competitive. Maize cobs have beneficial characteristics for utilization as feedstock including compact tissue, high cellulose content, and low ash and nitrogen content. Nitrogen is quantitatively the most important nutrient for plant growth. However, the influence of nitrogen fertilization on maize cob production is unclear. In this study, quantitative trait loci (QTL) have been analyzed for cob morphological traits such as cob weight, volume, length, diameter and cob tissue density, and grain yield under normal and low nitrogen regimes. 213 doubled-haploid lines of the intermated B73 × Mo17 (IBM) Syn10 population have been resequenced for 8575 bins, based on SNP markers. A total of 138 QTL were found for six traits across six trials using composite interval mapping with ten cofactors and empirical comparison-wise thresholds (P = 0.001). Despite moderate to high repeatabilities across trials, few QTL were consistent across trials and overall levels of explained phenotypic variance were lower than expected some of the cob trait × trial combinations (R (2) = 7.3-43.1 %). Variation for cob traits was less affected by nitrogen conditions than by grain yield. Thus, the economics of cob usage under low nitrogen regimes is promising.

Preliminary evidence for associations between molecular markers and quantitative traits in a set of bread wheat (Triticum aestivum L.) cultivars and breeding lines.

Science.gov (United States)

Abdollahi Mandoulakani, Babak; Nasri, Shilan; Dashchi, Sahar; Arzhang, Sorour; Bernousi, Iraj; Abbasi Holasou, Hossein

The identification of polymorphic markers associated with various quantitative traits allows us to test their performance for the exploitation of the extensive quantitative variation maintained in gene banks. In the current study, a set of 97 wheat germplasm accessions including 48 cultivars and 49 breeding lines were evaluated for 18 agronomic traits. The accessions were also genotyped with 23 ISSR, nine IRAP and 20 REMAP markers, generating a total of 658 clear and scorable bands, 86% of which were polymorphic. Both neighbor-joining dendrogram and Bayesian analysis of clustering of individuals revealed that the accessions could be divided into four genetically distinct groups, indicating the presence of a population structure in current wheat germplasm. Associations between molecular markers and 18 agronomic traits were analyzed using the mixed linear model (MLM) approach. A total of 94 loci were found to be significantly associated with agronomic traits (P≤0.01). The highest number of bands significantly associated with the 18 traits varied from 11 for number of spikelets spike -1 (NSS) to two for grain yield in row (GRY). Loci ISSR16-9 and REMAP13-10 were associated with three different traits. The results of the current study provide useful information about the performance of retrotransposon-based and ISSR molecular markers that could be helpful in selecting potentially elite gene bank samples for wheat-breeding programs. Copyright © 2017 Académie des sciences. Published by Elsevier Masson SAS. All rights reserved.

Genetic variation and correlation of agronomic traits in meadow bromegrass (Bromus riparius Rehm clones

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Araújo Marcelo Renato Alves de

2004-01-01

Full Text Available Meadow bromegrass (Bromus riparius Rehm. is a recently introduced pasture grass in western Canada. Its leafy production and rapid regrowth have made it a major grass species for pasturing beef animals in this region. As relatively little breeding work has been done on this species, there is little information on its breeding behaviour. The main objective of this study was to estimate total genetic variability, broad-sense heritability, phenotypic and genetic correlations. Forty-four meadow bromegrass clones were evaluated for agronomic characters. Genetic variation for dry matter yield, seed yield, fertility index, harvest index, plant height, plant spread, crude protein, neutral detergent fiber and acid detergent fiber, was significant. Broad-sense heritability estimates exceeded 50% for all characters. Heritability estimates were at least 3.5 times greater than their standard errors. Phenotypic and genetic correlation between all possible characters were measured. There was general agreement in both sign and magnitude between genetic and phenotypic correlations. Correlations between the different characters demonstrated that it is possible to simultaneously improve seed and forage yield. Based on the results, it appears that the development of higher yielding cultivars with higher crude protein, and lower acid and neutral detergent fibers concentration should be possible.

大豆主要农艺性状与品质性状间的灰色关联度分析%Grey Correlation Degree Analysis on Main Agronomic and Quality Traits in Soybean

Institute of Scientific and Technical Information of China (English)

童燕; 肖敬德; 张光; 王卫民; 李海燕

2013-01-01

High yield and good quality are important targets of soybean breeding, and grey relation analysis is one of methods in grey theory. Using the method of grey relation analysis and correlation coefficient k and correlation degree r of agronomic and quality traits, the article analyzed the relations between soybean agronomic and quality characters. The analysis showed that soybean agronomic and quality characters had positive correlation. Yield per plant had the greatest influence on fat and protein content, while hundred seed weight was in the second place. The result provided theoretical evidence for soybean breeding.%　　高产、优质育种是大豆主要育种目标，灰色关联度分析是灰色理论中的一种分析方法，应用灰色关联度分析的这一方法，通过分析农艺性状的各种性状对品质性状的关联系数（k）及关联度r，研究影响品质性状的主要农艺性状及其影响程度，试验分析了大豆主要农艺性状与品质性状之间的关联度，优势分析表明，大豆农艺性状与品质性状为正相关，从关联序可以得出对脂肪含量和蛋白质含量影响最大的是单株产量，其次是百粒重，为大豆育种提供了重要理论依据。

Mapping quantitative trait loci in plant breeding populations : Use of parental haplotype sharing

NARCIS (Netherlands)

Jansen, Ritsert C.; Jannink, Jean-Luc; Beavis, William D.

2003-01-01

Applied breeding programs evaluate large numbers of progeny derived from multiple related crosses for a wide range of agronomic traits and for tens to hundreds of molecular markers. This study was conducted to determine how these phenotypic and genetic data could be used for routinely mapping

Genome-wide association mapping of leaf metabolic profiles for dissecting complex traits in maize.

Science.gov (United States)

Riedelsheimer, Christian; Lisec, Jan; Czedik-Eysenberg, Angelika; Sulpice, Ronan; Flis, Anna; Grieder, Christoph; Altmann, Thomas; Stitt, Mark; Willmitzer, Lothar; Melchinger, Albrecht E

2012-06-05

The diversity of metabolites found in plants is by far greater than in most other organisms. Metabolic profiling techniques, which measure many of these compounds simultaneously, enabled investigating the regulation of metabolic networks and proved to be useful for predicting important agronomic traits. However, little is known about the genetic basis of metabolites in crops such as maize. Here, a set of 289 diverse maize inbred lines was genotyped with 56,110 SNPs and assayed for 118 biochemical compounds in the leaves of young plants, as well as for agronomic traits of mature plants in field trials. Metabolite concentrations had on average a repeatability of 0.73 and showed a correlation pattern that largely reflected their functional grouping. Genome-wide association mapping with correction for population structure and cryptic relatedness identified for 26 distinct metabolites strong associations with SNPs, explaining up to 32.0% of the observed genetic variance. On nine chromosomes, we detected 15 distinct SNP-metabolite associations, each of which explained more then 15% of the genetic variance. For lignin precursors, including p-coumaric acid and caffeic acid, we found strong associations (P values to ) with a region on chromosome 9 harboring cinnamoyl-CoA reductase, a key enzyme in monolignol synthesis and a target for improving the quality of lignocellulosic biomass by genetic engineering approaches. Moreover, lignin precursors correlated significantly with lignin content, plant height, and dry matter yield, suggesting that metabolites represent promising connecting links for narrowing the genotype-phenotype gap of complex agronomic traits.

Effects of main traits of sweet sorghum irradiated by carbon ions

International Nuclear Information System (INIS)

Li Wenjian; He Jingyu; Liu Qingfang; Yu Lixia; Dong Xicun

2009-01-01

To investigate the influence of carbon ion irradiation on important agronomic characters of sweet sorghum, dry seeds of Sweet Sorghum BJ0601 and BJ0602 were irradiated by 100 MeV/u 12 C +6 ion beam to different doses at Heavy Ion Accelerator National Laboratory in Lanzhou (HIANLL). When matured, the main traits of sweet sorghum were measured. The correlation coefficient of five main agronomic characters, i.e. number of node, plant height, stalk diameter, sugar content and stem weight per plant, were analyzed using the SPSS 13.0 software. The results indicated that the obvious influence of sweet sorghum irradiated by carbon ion beam was observed. In addition, the correlation of main traits was studied. This study may provide rudimental data to select novel variety of sweet sorghum suited for fuel ethanol production. In addition, the average of sugar content of early mutant BJ0601-1 is higher than BJ0601 in M2, and the sugar content of sweet sorghum may be improved by carbon ion beam irradiation. (authors)

The agronomic characters of a high protein rice mutant

International Nuclear Information System (INIS)

Harn, C.; Won, J.L.; Choi, K.T.

1975-01-01

Mutant lines (M 5 -M 9 ) of macro-phenotypic traits from several varieties were screened for the protein content. Mutant 398 (M 9 ) is one of the high protein mutants selected from Hokwang. Three years' tests revealed that it has a high protein line under any condition of cultivation. Except for early maturity and short culmness, other agronomic and yield characters were similar to the original variety. There was no difference between the mutant 398 and its mother variety in grain shape and weight, and also the size and protein content of the embryo. The high protein content of the mutant is attributable to the increase of protein in the endosperm. About 150 normal-looking or a few days-earlier-maturing selections were made from Jinheung variety in the M 3 and screened for protein. Promising lines in terms of the plant type, yield and protein were obtained. (author)

Quantitative Trait Locus (QTL meta-analysis and comparative genomics for candidate gene prediction in perennial ryegrass (Lolium perenne L.

Directory of Open Access Journals (Sweden)

Shinozuka Hiroshi

2012-11-01

Full Text Available Abstract Background In crop species, QTL analysis is commonly used for identification of factors contributing to variation of agronomically important traits. As an important pasture species, a large number of QTLs have been reported for perennial ryegrass based on analysis of biparental mapping populations. Further characterisation of those QTLs is, however, essential for utilisation in varietal improvement programs. Results A bibliographic survey of perennial ryegrass trait-dissection studies identified a total of 560 QTLs from previously published papers, of which 189, 270 and 101 were classified as morphology-, physiology- and resistance/tolerance-related loci, respectively. The collected dataset permitted a subsequent meta-QTL study and implementation of a cross-species candidate gene identification approach. A meta-QTL analysis based on use of the BioMercator software was performed to identify two consensus regions for pathogen resistance traits. Genes that are candidates for causal polymorphism underpinning perennial ryegrass QTLs were identified through in silico comparative mapping using rice databases, and 7 genes were assigned to the p150/112 reference map. Markers linked to the LpDGL1, LpPh1 and LpPIPK1 genes were located close to plant size, leaf extension time and heading date-related QTLs, respectively, suggesting that these genes may be functionally associated with important agronomic traits in perennial ryegrass. Conclusions Functional markers are valuable for QTL meta-analysis and comparative genomics. Enrichment of such genetic markers may permit further detailed characterisation of QTLs. The outcomes of QTL meta-analysis and comparative genomics studies may be useful for accelerated development of novel perennial ryegrass cultivars with desirable traits.

Genetic characterization of Moroccan and the exotic bread wheat cultivars using functional and random DNA markers linked to the agronomic traits for genomics-assisted improvement.

Science.gov (United States)

Henkrar, Fatima; El-Haddoury, Jamal; Ouabbou, Hassan; Bendaou, Najib; Udupa, Sripada M

2016-06-01

Genetic characterization, diversity analysis and estimate of the genetic relationship among varieties using functional and random DNA markers linked to agronomic traits can provide relevant guidelines in selecting parents and designing new breeding strategies for marker-assisted wheat cultivar improvement. Here, we characterize 20 Moroccan and 19 exotic bread wheat (Triticum aestivum L.) cultivars using 47 functional and 7 linked random DNA markers associated with 21 loci of the most important traits for wheat breeding. The functional marker analysis revealed that 35, 45, and 10 % of the Moroccan cultivars, respectively have the rust resistance genes (Lr34/Yr18/Pm38), dwarfing genes (Rht1b or Rht2b alleles) and the leaf rust resistance gene (Lr68). The marker alleles for genes Lr37/Yr17/Sr38, Sr24 and Yr36 were present only in the exotic cultivars and absent in Moroccan cultivars. 25 % of cultivars had 1BL.1RS translocation. 70 % of the wheat cultivars had Ppo-D1a and Ppo-A1b associated with low polyphenol oxidase activity. 10 % of cultivars showed presence of a random DNA marker allele (175 bp) linked to Hessian fly resistance gene H22. The majority of the Moroccan cultivars were carrying alleles that impart good bread making quality. Neighbor joining (NJ) and principal coordinate analysis based on the marker data revealed a clear differentiation between elite Moroccan and exotic wheat cultivars. The results of this study are useful for selecting suitable parents for making targeted crosses in marker-assisted wheat breeding and enhancing genetic diversity in the wheat cultivars.

Effect of agronomical practices on carpology, fruit and oil composition, and oil sensory properties, in olive (Olea europaea L.).

Science.gov (United States)

Rosati, Adolfo; Cafiero, Caterina; Paoletti, Andrea; Alfei, Barbara; Caporali, Silvia; Casciani, Lorena; Valentini, Massimiliano

2014-09-15

We examined whether some agronomical practices (i.e. organic vs. conventional) affect olive fruit and oil composition, and oil sensory properties. Fruit characteristics (i.e. fresh and dry weight of pulp and pit, oil content on a fresh and dry weight basis) did not differ. Oil chemical traits did not differ except for increased content of polyphenols in the organic treatments, and some changes in the acidic composition. Sensory analysis revealed increased bitterness (both cultivars) and pungency (Frantoio) and decreased sweetness (Frantoio) in the organic treatment. Fruit metabolomic analysis with HRMAS-NMR indicated significant changes in some compounds including glycocholate, fatty acids, NADPH, NADP+, some amino acids, thymidine, trigonelline, nicotinic acid, 5,6-dihydrouracil, hesanal, cis-olefin, β-D-glucose, propanal and some unassigned species. The results suggest that agronomical practices may have effects on fruit composition that may be difficult to detect unless a broad-spectrum analysis is used. Copyright © 2014 Elsevier Ltd. All rights reserved.

Agronomic characteristic of a dwarf germplasm sunflower line

OpenAIRE

Vassilevska-Ivanova Roumiana; Tcekova Zoja

2005-01-01

A new sunflower (Helianthus annuus L) dwarf line, HA-ARG-1, has been developed after interspecific hybridization between cultivated sunflower H. annuus and wild annual silver-leaf sunflower H. argophyllus. Plants were selected for reduced height and multiple branching characteristics. The agronomic, morphologic and oil content characteristics of the line were analyzed. Isolation of similar dwarfed lines illustrates the importance of using the wild sunflower germplasms in the development of sp...

Haplotype analysis of the genes encoding glutamine synthetase plastic isoforms and their association with nitrogen-use- and yield-related traits in bread wheat.

Science.gov (United States)

Li, Xin-Peng; Zhao, Xue-Qiang; He, Xue; Zhao, Guang-Yao; Li, Bin; Liu, Dong-Cheng; Zhang, Ai-Min; Zhang, Xue-Yong; Tong, Yi-Ping; Li, Zhen-Sheng

2011-01-01

Glutamine synthetase (GS) plays a key role in the growth, nitrogen (N) use and yield potential of cereal crops. Investigating the haplotype variation of GS genes and its association with agronomic traits may provide useful information for improving wheat N-use efficiency and yield. We isolated the promoter and coding region sequences of the plastic glutamine synthetase isoform (GS2) genes located on chromosomes 2A, 2B and 2D in bread wheat. By analyzing nucleotide sequence variations of the coding region, two, six and two haplotypes were distinguished for TaGS2-A1 (a and b), TaGS2-B1 (a-f) and TaGS2-D1 (a and b), respectively. By analyzing the frequency data of different haplotypes and their association with N use and agronomic traits, four major and favorable TaGS2 haplotypes (A1b, B1a, B1b, D1a) were revealed. These favorable haplotypes may confer better seedling growth, better agronomic performance, and improved N uptake during vegetative growth or grain N concentration. Our data suggest that certain TaGS2 haplotypes may be valuable in breeding wheat varieties with improved agronomic performance and N-use efficiency. © The Authors (2010). Journal compilation © New Phytologist Trust (2010).

Environmental risk assessments for transgenic crops producing output trait enzymes

Science.gov (United States)

Tuttle, Ann; Shore, Scott; Stone, Terry

2009-01-01

The environmental risks from cultivating crops producing output trait enzymes can be rigorously assessed by testing conservative risk hypotheses of no harm to endpoints such as the abundance of wildlife, crop yield and the rate of degradation of crop residues in soil. These hypotheses can be tested with data from many sources, including evaluations of the agronomic performance and nutritional quality of the crop made during product development, and information from the scientific literature on the mode-of-action, taxonomic distribution and environmental fate of the enzyme. Few, if any, specific ecotoxicology or environmental fate studies are needed. The effective use of existing data means that regulatory decision-making, to which an environmental risk assessment provides essential information, is not unnecessarily complicated by evaluation of large amounts of new data that provide negligible improvement in the characterization of risk, and that may delay environmental benefits offered by transgenic crops containing output trait enzymes. PMID:19924556

Root phenotyping: from component trait in the lab to breeding.

Science.gov (United States)

Kuijken, René C P; van Eeuwijk, Fred A; Marcelis, Leo F M; Bouwmeester, Harro J

2015-09-01

In the last decade cheaper and faster sequencing methods have resulted in an enormous increase in genomic data. High throughput genotyping, genotyping by sequencing and genomic breeding are becoming a standard in plant breeding. As a result, the collection of phenotypic data is increasingly becoming a limiting factor in plant breeding. Genetic studies on root traits are being hampered by the complexity of these traits and the inaccessibility of the rhizosphere. With an increasing interest in phenotyping, breeders and scientists try to overcome these limitations, resulting in impressive developments in automated phenotyping platforms. Recently, many such platforms have been thoroughly described, yet their efficiency to increase genetic gain often remains undiscussed. This efficiency depends on the heritability of the phenotyped traits as well as the correlation of these traits with agronomically relevant breeding targets. This review provides an overview of the latest developments in root phenotyping and describes the environmental and genetic factors influencing root phenotype and heritability. It also intends to give direction to future phenotyping and breeding strategies for optimizing root system functioning. A quantitative framework to determine the efficiency of phenotyping platforms for genetic gain is described. By increasing heritability, managing effects caused by interactions between genotype and environment and by quantifying the genetic relation between traits phenotyped in platforms and ultimate breeding targets, phenotyping platforms can be utilized to their maximum potential. © The Author 2015. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Effects of different irrigation regimes on fruit production, oil quality, water use efficiency and agronomic nitrogen use efficiency of pumpkin

Directory of Open Access Journals (Sweden)

Javad Hamzei

2016-05-01

Full Text Available Effect of different irrigation regimes and nitrogen fertilizer on percentage of grain fatty acids, yield, water and nitrogen use efficiency of pumpkin was studies as split plot based on complete randomized block design with three replications in growing season of 2013. Irrigation treatments (320, 420, 600 and 900 mm ha-1 were se as main plots and nitrogen fertilizer (0, 130, 260, 390 and 520 kg urea ha-1 were allocated in subplots. The effect of irrigation and nitrogen on all traits was significant. Also, interaction of irrigation × nitrogen had significant effect on all traits except WUE and NUE. The Highest values of linoleic fatty acid (33.99%, fruit yield (4.40 kg m-2, grain yield (1.53 kg m-2 and agronomic nitrogen use efficiency (32.27 kg fruit/kg urea were achieved at consumption of 600 mm water ha-1 and application of 390 kg urea ha-1. The highest water use efficiency for fruit and grain yield; 56.61 and 1.10 kg mm-1, were revealed at 600 mm irrigation water ha-1. Between nitrogen levels, maximum and minimum WUE for fruit and grain yield were achieved at 390 kg urea and non application of urea treatments, respectively. Also, maximum agronomic nitrogen efficiency belonged to 390 kg urea and minimum this trait with 33 reductions was revealed at 520 kg urea. Based on the results of this research and with considering of water and nitrogen use efficiency, irrigation of pumpkin plants with 600 mm water ha-1 and consumption of 390 kg urea ha-1 was identified as a suitable treatment.

Genetic Variability of 27 Traits in a Core Collection of Flax (Linum usitatissimum L.).

Science.gov (United States)

You, Frank M; Jia, Gaofeng; Xiao, Jin; Duguid, Scott D; Rashid, Khalid Y; Booker, Helen M; Cloutier, Sylvie

2017-01-01

Assessment of genetic variability of plant core germplasm is needed for efficient germplasm utilization in breeding improvement. A total of 391 accessions of a flax core collection, which preserves the variation present in the world collection of 3,378 accessions maintained by Plant Gene Resources of Canada (PGRC) and represents a broad range of geographical origins, different improvement statuses and two morphotypes, was evaluated in field trials in up to 8 year-location environments for 10 agronomic, eight seed quality, six fiber and three disease resistance traits. The large phenotypic variation in this subset was explained by morphotypes (22%), geographical origins (11%), and other variance components (67%). Both divergence and similarity between two basic morphotypes, namely oil or linseed and fiber types, were observed, whereby linseed accessions had greater thousand seed weight, seeds m -2 , oil content, branching capability and resistance to powdery mildew while fiber accessions had greater straw weight, plant height, protein content and resistance to pasmo and fusarium wilt diseases, but they had similar performance in many traits and some of them shared common characteristics of fiber and linseed types. Weak geographical patterns within either fiber or linseed accessions were confirmed, but specific trait performance was identified in East Asia for fiber type, and South Asia and North America for linseed type. Relatively high broad-sense heritability was obtained for seed quality traits, followed by agronomic traits and resistance to powdery mildew and fusarium wilt. Diverse phenotypic and genetic variability in the flax core collection constitutes a useful resource for breeding.

Cassava traits and end-user preference: Relating traits to consumer liking, sensory perception, and genetics.

Science.gov (United States)

Bechoff, Aurélie; Tomlins, Keith; Fliedel, Geneviève; Becerra Lopez-Lavalle, Luis Augusto; Westby, Andrew; Hershey, Clair; Dufour, Dominique

2018-03-04

Breeding efforts have focused on improving agronomic traits of the cassava plant however little research has been done to enhance the crop palatability. This review investigates the links between cassava traits and end-user preference in relation with sensory characteristics. The main trait is starch and its composition related to the textural properties of the food. Pectin degradation during cooking resulted in increased mealiness. Nutritional components such as carotenoids made the cassava yellow but also altered sweetness and softness; however, yellow cassava was more appreciated by consumers than traditional (white) varieties. Components formed during processing such as organic acids gave fermented cassava products an acidic taste that was appreciated but the fermented smell was not always liked. Anti-nutritional compounds such as cyanogenic glucosides were mostly related to bitter taste. Post-harvest Physiological Deterioration (PPD) affected the overall sensory characteristics and acceptability. Genes responsible for some of these traits were also investigated. Diversity in cassava food products can provide a challenge to identifying acceptance criteria. Socio-economic factors such as gender may also be critical. This review leads to questions in relation to the adaptation of cassava breeding to meet consumer needs and preference in order to maximize income, health and food security.

Identification of Three Distinct Eggplant Subgroups within the Solanum aethiopicum Gilo Group from Côte d’Ivoire by Morpho-Agronomic Characterization

Directory of Open Access Journals (Sweden)

Auguste Kouassi

2014-10-01

Full Text Available The Solanum aethiopicum Gilo group, described as homogeneous, shows a high diversity, at least at the morphological level. In Côte d’Ivoire, farmers distinguish three subgroups, named “N’Drowa”, “Klogbo” and “Gnangnan”, within this group. Data were obtained from 10 quantitative and 14 qualitative morpho-agronomic traits measured in 326 accessions of Gilo eggplants, at flowering and fruiting stages. Univariate and multivariate analyses allowed clearly clustering the studied accessions into the three subgroups. Fruit taste, leaf blade width, fruit diameter, leaf blade length, fruit weight, fruit color at commercial ripeness, petiole length, germination time, plant breadth, fruit position on the plant, fruit length and flowering time were, in decreasing order, the twelve most discriminating traits. Compared to the “Gnangnan” subgroup, the “N’Drowa” subgroup has smaller plant breadth and larger leaves. The fruits of this subgroup were mainly white at commercial ripeness, larger and sweeter. Most of the traits of the “Klogbo” subgroup were intermediate between those of the “N’Drowa” and “Gnangnan” subgroups. Our results could contribute to a better understanding of S. aethiopicum diversity and to the development of a core collection for African eggplant breeding.

Development and bin mapping of gene-associated interspecific SNPs for cotton (Gossypium hirsutum L.) introgression breeding efforts.

Science.gov (United States)

Hulse-Kemp, Amanda M; Ashrafi, Hamid; Zheng, Xiuting; Wang, Fei; Hoegenauer, Kevin A; Maeda, Andrea B V; Yang, S Samuel; Stoffel, Kevin; Matvienko, Marta; Clemons, Kimberly; Udall, Joshua A; Van Deynze, Allen; Jones, Don C; Stelly, David M

2014-10-30

Cotton (Gossypium spp.) is the largest producer of natural fibers for textile and is an important crop worldwide. Crop production is comprised primarily of G. hirsutum L., an allotetraploid. However, elite cultivars express very small amounts of variation due to the species monophyletic origin, domestication and further bottlenecks due to selection. Conversely, wild cotton species harbor extensive genetic diversity of prospective utility to improve many beneficial agronomic traits, fiber characteristics, and resistance to disease and drought. Introgression of traits from wild species can provide a natural way to incorporate advantageous traits through breeding to generate higher-producing cotton cultivars and more sustainable production systems. Interspecific introgression efforts by conventional methods are very time-consuming and costly, but can be expedited using marker-assisted selection. Using transcriptome sequencing we have developed the first gene-associated single nucleotide polymorphism (SNP) markers for wild cotton species G. tomentosum, G. mustelinum, G. armourianum and G. longicalyx. Markers were also developed for a secondary cultivated species G. barbadense cv. 3-79. A total of 62,832 non-redundant SNP markers were developed from the five wild species which can be utilized for interspecific germplasm introgression into cultivated G. hirsutum and are directly associated with genes. Over 500 of the G. barbadense markers have been validated by whole-genome radiation hybrid mapping. Overall 1,060 SNPs from the five different species have been screened and shown to produce acceptable genotyping assays. This large set of 62,832 SNPs relative to cultivated G. hirsutum will allow for the first high-density mapping of genes from five wild species that affect traits of interest, including beneficial agronomic and fiber characteristics. Upon mapping, the markers can be utilized for marker-assisted introgression of new germplasm into cultivated cotton and in

Evaluation of Different Triticale (X Triticosecale wittmack Genotypes for Agronomic and Qualitative Characters

Directory of Open Access Journals (Sweden)

S Ansari

2018-02-01

Full Text Available Introduction Genetic variation is essential for the success of breeding programs and is vital to helping the genetic improvement of Triticale. Understanding patterns of genetic diversity in the Triticale and use of its genetic resources on a practical basis may help to establish appropriate procedures for breeding genetic materials. It can be used as a benchmark for classifying parenting lines and favorable heterotic groups in triticale. Triticale (X Triticosecale wittmack has considerable potential either as a grain crop or forage crop, but has received little attention from breeding programs in Iran. Materials and Methods This research was conducted to study the genetic diversity and the performance of triticale cultivars imported from Poland and International Maize and Wheat Improvement Center (CIMMYT using some agro-morphological traits. Forty one triticale genotypes were evaluated using a randomized complete block design with three replications at Research Farm of College of Agriculture, Isfahan University of Technology. Agronomic characteristics comprising plant height (cm, length of the last node (cm, flag leaf length (cm, spike length (cm, thousand seed weight (g, the number of spike per m2, seed yield (tha-1, grain number per spike, number of spikelets per spike, harvest index, test weight (kg hectoliter, biological yield (ton ha-1, wet and dry gluten content (% were measured. All statistical analyses were performed using SAS statistical software. The multivariate analysis procedures used to analyze the collected data and to investigate relationships among variables. Mean comparison was conducted using LSD range test (at 5% level. The unweighted neighbour joining (UNJ cluster analysis was carried out using NT-SYS software. Results and Discussion Analysis of variance showed that genotypes were significantly different in all characters. The measured traits varied in coefficient of genotypic and phenotypic variation. The highest

Agronomic Evaluation of Bunching Onion in the Colombian Cundiboyacense High Plateau

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Carlos H. Galeano Mendoza

2018-01-01

Full Text Available Bunching onion (Allium fistulosum L. is a strategic crop for Colombia due to its economic relevance within fresh and processed food markets, and therefore, there is a demand for high yielding genotypes adapted to specific regions. For this reason, after carrying out a clonal selection process including 62 genotypes, ten of these, including a regional control, were evaluated for six different traits in Boyacá (Colombia during 2012 and 2013. These traits were grouped into agronomic, yield, and processing categories. In general, these showed significant differences (p≤0.01 for genotypes, location, and genotypes × location interaction. Compared with the regional control and based on the multienvironmental analysis the genotypes Clone 30 and Clone 38 were the most promising new cultivars identified in this study. These two clones showed comparative advantages on earliness and yield, and they moreover showed some level of resistance to downy mildew and root rot, the most limiting diseases for Boyacá’s bunch onion farmers. Therefore, Clone 30 and Clone 38 were registered as new bunching onion cultivars for the Cundiboyacense High Plateau region under the names Corpoica Aquitania-1 and Corpoica Tota-1, respectively. Finally, further approaches and initiatives on bunching onion breeding are discussed.

Response of Agronomic Traits of Wheat and Barley to Sources and Different Rates of Selenium in Rainfed Condition

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N. A Sajedi

2017-10-01

Full Text Available Introduction Environmental stresses affect growth, metabolism and crops yield. Drought is an important stress and it decreases crop productivity. Drought stress symptoms vary, depending on intensity and duration of drought and growth stage of the plant. The first response of plant to drought stress is producing the active oxygen species (ROS in cell that these cause injury to membranes and proteins. Selenium (Se application could have beneficial effect on growth and stress tolerance of plants by increasing their activity of antioxidants and reduce the reactive oxygen species over production. Selenium is essential for growth and activities of human and animals. Absorption and accumulation of selenium in plant depend on chemical compound and concentration of selenium in soil. Recent studies have demonstrated that Se increases resistance and antioxidant capacity of plants to various stress. It is reported that selenium application in barley plant no changes the amounts of malondialdehyde and hydrogen peroxide under water deficit stress. The current paper studies the response of agronomic traits of wheat and barley to sources and different rates of selenium in rain fed condition. Materials and Methods In order to investigate response of agronomic traits of wheat and barley to sources and different rates of selenium in rainfed condition, an experiment was carried out as factorial based on randomized complete block design with three replications at the Research Station of Islamic Azad University, Arak Branch, during 2014-2015. Experimental factors were included selenium sources at two levels, Sodium selenate and Selenite, Selenium rates at three levels of zero, 18 and 36 g ha-1 and two crop plants of wheat and barley. The wheat rain fed seed Azar 2 cultivar and Barley cultivar Abidar were hand planted at 15 cm spacing in 6 m rows, with one meter borders between the plots. Foliar application of Se was performed at rate of 18 and 36 g ha-1 at appearance

Variation of gene effects of six agronomic traits with water regimes in ...

African Journals Online (AJOL)

Separate generations mean analyses revealed that gene effects were dependent upon water regime. Under irrigated regime, only additive and dominance effects were implicated in inheritance of all traits, except plant height in the two crosses and grains per spike in the cross Razzek × Chili. However, under rainfed ...

A farm-level analysis of economic and agronomic impacts of gradual climate warming

International Nuclear Information System (INIS)

Kaiser, H.M.; Sampath, R.; Riha, S.J.; Wilks, D.S.; Rossiter, D.G.

1993-01-01

The potential economic and agronomic impacts of gradual climate warming are examined at the farm level. Three models of the relevant climatic, agronomic, and economic processes are developed and linked to address climate change impacts and agricultural adaptability. Several climate warming severity. The results indicate that grain farmers in southern Minnesota can effectively adapt to a gradually changing climate (warmer and either wetter or drier) by adopting later maturing cultivars, changing crop mix, and altering the timing of field operations to take advantage of a longer growing season resulting from climate warming

Association Mapping for Important Agronomic Traits in Safflower (Carthamus tinctorius L.) Core Collection Using Microsatellite Markers

OpenAIRE

Heena Ambreen; Shivendra Kumar; Amar Kumar; Manu Agarwal; Arun Jagannath; Shailendra Goel

2018-01-01

Carthamus tinctorius L. (safflower) is an important oilseed crop producing seed oil rich in unsaturated fatty acids. Scarcity of identified marker-trait associations is a major limitation toward development of successful marker-assisted breeding programs in safflower. In the present study, a safflower panel (CartAP) comprising 124 accessions derived from two core collections was assayed for its suitability for association mapping. Genotyping of CartAP using microsatellite markers revealed sig...

Agronomical Parameters, Sugar Profile and Antioxidant Compounds of “Catherine” Peach Cultivar Influenced by Different Plum Rootstocks

Directory of Open Access Journals (Sweden)

Carolina Font i Forcada

2014-02-01

Full Text Available The influence of seven plum rootstocks (Adesoto, Monpol, Montizo, Puebla de Soto 67 AD, PM 105 AD, St. Julien GF 655/2 and Constantí 1 on individual and total sugars, as well as on antioxidant content in fruit flesh of “Catherine” peaches, was evaluated for three years. Agronomical and basic fruit quality parameters were also determined. At twelve years after budding, significant differences were found between rootstocks for the different agronomic and fruit quality traits evaluated. The Pollizo plum rootstocks Adesoto and PM 105 AD seem to induce higher sweetness to peach fruits, based on soluble solids content, individual (sucrose, fructose and sorbitol and total sugars. A clear tendency was also observed with the rootstock Adesoto, inducing the highest content of phenolics, flavonoids, vitamin C and relative antioxidant capacity (RAC. Thus, the results of this study demonstrate the significant effect of rootstock on the sugar profile and phytochemical characteristics of peach fruits. In addition, this work shows the importance of the sugar profile, because specific sugars play an important role in peach flavour quality, as well as the studied phytochemical compounds when looking for high quality peaches with enhanced health properties.

Stakeholders’ Perceptions of Agronomic Iodine Biofortification: A SWOT-AHP Analysis in Northern Uganda

Science.gov (United States)

Olum, Solomon; Gellynck, Xavier; Okello, Collins; Webale, Dominic; Odongo, Walter; Ongeng, Duncan

2018-01-01

Agronomic biofortification (i.e., the application of fertilizer to elevate micronutrient concentrations in staple crops) is a recent strategy recommended for controlling Iodine Deficiency Disorders (IDDs). However, its success inevitably depends on stakeholders’ appreciation and acceptance of it. By taking Northern Uganda as a case, this study aimed to capture and compare the perceptions of seven key stakeholder groups with respect to agronomic iodine biofortification. Therefore, we employed a SWOT (Strength, Weaknesses, Opportunities & Threats) analysis in combination with an Analytical Hierarchy Process (AHP). Findings show that stakeholders (n = 56) are generally positive about agronomic iodine biofortification in Uganda, as its strengths and opportunities outweighed weaknesses and threats. Cultural acceptance and effectiveness are considered the most important strengths while the high IDD prevalence rate and the availability of iodine deficient soils are key opportunities for further developing agronomic iodine biofortification. Environmental concerns about synthetic fertilizers as well as the time needed to supply iodine were considered crucial weaknesses. The limited use of fertilizer in Uganda was the main threat. While this study provides insight into important issues and priorities for iodine biofortification technology in Uganda, including differences in stakeholder views, the application of the SWOT-AHP method will guide future researchers and health planners conducting stakeholder analysis in similar domains. PMID:29587370

Stakeholders' Perceptions of Agronomic Iodine Biofortification: A SWOT-AHP Analysis in Northern Uganda.

Science.gov (United States)

Olum, Solomon; Gellynck, Xavier; Okello, Collins; Webale, Dominic; Odongo, Walter; Ongeng, Duncan; De Steur, Hans

2018-03-24

Agronomic biofortification (i.e., the application of fertilizer to elevate micronutrient concentrations in staple crops) is a recent strategy recommended for controlling Iodine Deficiency Disorders (IDDs). However, its success inevitably depends on stakeholders' appreciation and acceptance of it. By taking Northern Uganda as a case, this study aimed to capture and compare the perceptions of seven key stakeholder groups with respect to agronomic iodine biofortification. Therefore, we employed a SWOT (Strength, Weaknesses, Opportunities & Threats) analysis in combination with an Analytical Hierarchy Process (AHP). Findings show that stakeholders ( n = 56) are generally positive about agronomic iodine biofortification in Uganda, as its strengths and opportunities outweighed weaknesses and threats. Cultural acceptance and effectiveness are considered the most important strengths while the high IDD prevalence rate and the availability of iodine deficient soils are key opportunities for further developing agronomic iodine biofortification. Environmental concerns about synthetic fertilizers as well as the time needed to supply iodine were considered crucial weaknesses. The limited use of fertilizer in Uganda was the main threat. While this study provides insight into important issues and priorities for iodine biofortification technology in Uganda, including differences in stakeholder views, the application of the SWOT-AHP method will guide future researchers and health planners conducting stakeholder analysis in similar domains.

Poultry manure. Agronomic use or energy source?

International Nuclear Information System (INIS)

Trinchera, A.; Perri, P.T.

2000-01-01

By the year 2010, Italy could see the construction of three incinerators that use poultry manure as source of energy. In this paper, advantages and disadvantages of such a choice are considered in their environmental and economical aspects, taking into account the agronomic qualities of poultry manure. The analyses suggests that the agricultural sector should be the one to recover the biomass. It should be used above all as a fertiliser, either directly or after proper treatments improving its agronomic characteristics. Conversely, the energy sector should be in charge of dismissing the eventual surplus through incineration [it

GENETIC DIVERSITY OF WILD AND CULTIVATED Mucuna pruriens (L. DC. ACCESSIONS ANALYZED USING THIRTY MORPHO-AGRONOMICAL CHARACTERS

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N Sathyanarayana

2012-05-01

Full Text Available Genetic diversity and relatedness among 31 wild and 9 cultivated Mucuna pruriens accessions collected from diverse eco-climatic regions in India were evaluated using 30 morpho-agronomical characters. The experiments were carried by growing the plants in Randomized Complete Block Design (RCBD in four replications for two seasons. The results of PCA for 22 quantitative and 8 qualitative characters indicated that the first two PCs together explained 65.18% and 67.50% of the total variation respectively, which were drawn across a range of traits. Cluster analysis demonstrated on the whole high morphological diversity (63.05% amongst wild and cultivated accessions and low diversity (36.95% within cultivated accessions. Analysis of six yield traits based on LSD5% values revealed distinct genotypes under each category which are of potential value in breeding programs. Low morphological diversity within cultivated accessions emphasizes the need for expanding its genetic base in India.

Effect of Planting Date and Weed Control Methods on Yield and Agronomic Traits of Sunflower (Helianthus annuus L. in Khoy Region

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M. Akbari

2010-12-01

Full Text Available Effects of planting dates and weed control methods on yield and agronomic traits of sunflower was investigated. A factorial experiment based on a complete randomized blocks design with four replications was conducted in 2009. Treatments consisted of three planting date (April 4th, May5th and Juns5th and five weed control methods, Trifluralin (2 Lit/ha + Fokus (1.5 Lit/ha, Trifluralin+Nabu-s (3Lit/ha, Trifluralin, Hand weeding and without control. Results indicated that planting dates and weed control methods significantly affected head diameter, 100 grain weight, seed number per head and grain yield. Harvest index and oil percent was affected only by planting dates. The highest grain yield (630.1 g/m2, was produced in the second planting date (May 5 by using Trifluralin+Fokus. Delaying sowing date (after May 5 significantly decreased grain yield. The most important weeds in the experimental site were common lambsquarter (Chenopodium album, field bind weed (Convolvulus arvensis, bastard cabbage (Rapistrum rugosum, flower-of-an-hour (Hibiscus trionum, cockspur grass (Echinochloa colorum and green bristle grass (Setaria verticillata. It was observed that the dry matter weight sharply varied in all weed species in different planting dates, that is, in the 4th April the dry matter production of common lambsquarter and bastard cabbage, in June 5th planting date were maximum. Dry matter of broad leaf and narrow leaf weeds in the date of May 5th was lower than the other two planting dates. The interaction of planting date ×control methods on head diameter, seed number per head, grain yield and weeds dry matter was significant.

Genetic diversity, population structure and marker-trait associations for agronomic and grain traits in wild diploid wheat Triticum urartu.

Science.gov (United States)

Wang, Xin; Luo, Guangbin; Yang, Wenlong; Li, Yiwen; Sun, Jiazhu; Zhan, Kehui; Liu, Dongcheng; Zhang, Aimin

2017-07-01

Wild diploid wheat, Triticum urartu (T. urartu) is the progenitor of bread wheat, and understanding its genetic diversity and genome function will provide considerable reference for dissecting genomic information of common wheat. In this study, we investigated the morphological and genetic diversity and population structure of 238 T. urartu accessions collected from different geographic regions. This collection had 19.37 alleles per SSR locus and its polymorphic information content (PIC) value was 0.76, and the PIC and Nei's gene diversity (GD) of high-molecular-weight glutenin subunits (HMW-GSs) were 0.86 and 0.88, respectively. UPGMA clustering analysis indicated that the 238 T. urartu accessions could be classified into two subpopulations, of which Cluster I contained accessions from Eastern Mediterranean coast and those from Mesopotamia and Transcaucasia belonged to Cluster II. The wide range of genetic diversity along with the manageable number of accessions makes it one of the best collections for mining valuable genes based on marker-trait association. Significant associations were observed between simple sequence repeats (SSR) or HMW-GSs and six morphological traits: heading date (HD), plant height (PH), spike length (SPL), spikelet number per spike (SPLN), tiller angle (TA) and grain length (GL). Our data demonstrated that SSRs and HMW-GSs were useful markers for identification of beneficial genes controlling important traits in T. urartu, and subsequently for their conservation and future utilization, which may be useful for genetic improvement of the cultivated hexaploid wheat.

Business success and psychological traits of housing developers

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Mastura Jaafar

2014-06-01

Full Text Available Although the issues on entrepreneurship in the real estate industry are disparaging and have received little interest from global researchers, the significant roles played by the industry players warrant further investigation. The personal traits of the owners/managers are deemed to be the key factors to the business success of housing development firms. This paper examined the main determinants of successful business in the housing development sector under the lens of psychological traits of the owners/managers. To identify the success factors of housing development firms, interviews were conducted on 10 housing developers in Peninsular Malaysia. The study shows the significant psychological traits that distinguish the business success of housing developers compared with those in the existing literature. These factors are (1 high confidence and ambition, (2 vision and foresight, (3 industriousness, (4 perseverance and (5 integrity. As housing development is a risky industry, developers can use these findings as a guideline in managing their business toward superior performance.

Identification of molecular markers associated with fruit traits in olive and assessment of olive core collection with AFLP markers and fruit traits.

Science.gov (United States)

Ipek, M; Seker, M; Ipek, A; Gul, M K

2015-03-31

The purpose of this study was to characterize olive core collection with amplified fragment length polymorphism (AFLP) markers and fruit traits and to determine AFLP markers significantly associated with these fruit characters in olive. A total of 168 polymorphic AFLP markers generated by five primer combinations and nine fruit traits were used to characterize relationships between 18 olive cultivars. Although all olive cultivars were discriminated from each other by either AFLP markers (markers and fruit traits was not significantly correlated (r = 0.13). Partial clustering of olive cultivars by AFLP markers according to their geographical origin was observed. Associations of AFLP markers with fruits were determined using a multiple-regression analysis with stepwise addition of AFLP markers. Significant associations between eight AFLP markers and fruit traits were identified. While five AFLP markers demonstrated significant negative correlation with fruit and stone weight, width and length and total polyphenols (P markers displayed significant positive correlation with α-tocopherol and γ-tocopherol (P molecular markers with fruit traits in olive. Molecular markers associated with morphological and agronomic traits could be utilized for the breeding of olive cultivars. However, the association power of these markers needs to be confirmed in larger populations, and highly correlated markers should then be converted to PCR-based DNA markers such as sequence-characterized amplified region markers for better utilization.

MORPHOLOGICAL, DIVERSITY AND AGRONOMIC EVALUATION OF

African Journals Online (AJOL)

Natal, South Africa ... evaluated the agronomic performance of the PGs in comparison with a ..... 1456-2E and TGX 1669 - 19F in Northern and. Southern Guinea and detected low indigenous .... promiscuous soyabeans in moist savanna.

development of dual purpose sorghum: correlation and path

African Journals Online (AJOL)

ACSS

(Table 3). Grain yield and stem sugar traits. The correlation coefficients between grain yield and. T. ABLE 2. Correlation coefficients between grain yield and stem sugar content with selected agronomic traits in sorghum. SBX. GY. SBW. DT50F. HDL. SJS. NLP. PHT. Stem brix (SBX). 1.000. Grain yield (GY). 0.071**. 1.000.

Genetic diversity of Iranian rice germplasm based on morphological traits

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nade ali bagheri

2009-06-01

Full Text Available Study of genetic diversity of rice is very important for rice breeders. In this study 64 genotypes for 14 agronomic traits were evaluated. Phenotypic variation coefficients of some of traits were high which showed essential variation in this traits. Principal component analysis detected 6 components which explained 74.66 percent of the total variations. The first component was related to generative traits such as number of spiklet per panicle, number of full grain per panicle, date of 50% flowering and length of panicle. In the third component, the date of complete maturity with -0.730 has negative effects on yield. Correlation analysis of morphological traits indicated a negative and significant relationship between early maturity and plant height, which showed early maturity cultivars had higher plant type. Results of stepwise regression analysis for early maturity, indicated that three traits such as date of 50% flowering, number of full grain per panicle and plant height showed higher variation and explained 54.3 percent of total early maturity variations. All traits were classified into 2 groups, by cluster analysis and traits belonged to early maturity classified as a sub-group. Genotypes were classified into 4 groups by using method of Ward,s minimum variance and squared Euclidean distance. Native cultivars from the view point of early maturity and yield components had useful information for rice breeding. Key words: Genetic diversity, rice, morphological traits.

Evaluation of Spring Bread Wheat Lines (Triticum aestivum L. and Their Classification by Using Some Agronomic Traits

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A. Daryani

2011-06-01

Full Text Available To obtain superior genotypes from 30 advanced spring bread wheat cultivars a field experiment in RCBD was carried out in 1388. Traits like yield, yield components, harvest index, peduncle length, awn length, number of leaf, plant height, flag leaf area, penultimate leaf area, days to booting, days to spike emergence, days to flowering and physiological maturity were recorded. Analysis of variance showed significant difference among genotypes for the traits measured at %1 probability level. This indicates considerable genetic variations among the lines evaluated. Cluster analysis of traits measured, grouped lines into three categories. Eight lines were located in third cluster with respect to some traits including grain yield and other important traits like biological yield, number of seed per spike, spike length, peduncle length, plant height, flag leaf area, and number of spike per m² were found to be superior. By using factor analysis, five factors determined 78.99% of total variation. In this analysis, the first factor could account for 35% of total variation and nominated as effective factor on grain yield. Line with accession number of N-75-5 was found to be highest yielding (289.5 g/m2 (as compared with the other lines.

Evaluation of Spring Bread Wheat Lines (Triticum aestivum L. and Their Classification by Using Some Agronomic Traits

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A .R. Tarinejad

2010-10-01

Full Text Available To obtain superior genotypes from 30 advanced spring bread wheat cultivars a field experiment in RCBD was carried out in 1388. Traits like yield, yield components, harvest index, peduncle length, awn length, number of leaf, plant height, flag leaf area, penultimate leaf area, days to booting, days to spike emergence, days to flowering and physiological maturity were recorded. Analysis of variance showed significant difference among genotypes for the traits measured at %1 probability level. This indicates considerable genetic variations among the lines evaluated lines. Cluster analysis through Ward method, by using all of the traits, grouped lines into three clusters. Eight lines located in third cluster with respect to some traits including grain yield and other important traits like biological yield, number of seed per spike, spike length, peduncle length, plant height, flag leaf area, and number of spike per m² were superior. Factor analysis, five factors discriminated 78.99% of total variation. In this analysis, the first factor could determine 35% of total variation and nominated as effective factor on grain yield. Line with accession number N-75-5 was found to be highest yielding (289.5 g/m2 (as compared with the other lines.

Efficiency improvement for a sustainable agriculture : the integration of agronomic and farm economics approaches

OpenAIRE

Koeijer, de, T.J.

2002-01-01

Keywords: Sustainable farming systems, Agronomic efficiency, Economic efficiency, Environmental efficiency, Sustainability index, Interdisciplinary analysis.

The objective of the research described in this thesis was to determine what role improved agronomic efficiency can play in the transition towards more sustainable production systems. Agronomic efficiency measures the technical performance. If it could be improved, environmental damage could be reduced while, at the sam...

SHORT COMMUNICATION: Agronomic effectiveness of novel ...

African Journals Online (AJOL)

) uptake and dry matter yield of maize. The relative agronomic effectiveness of DPR partially acidulated with 50% of the sulfuric acid (H2SO4) required for complete acidulation, in increasing P uptake and dry matter yield was 60% and 75%, ...

Disentangling agronomic and economic yield gaps

NARCIS (Netherlands)

Dijk, van Michiel; Morley, Tomas; Jongeneel, Roel; Ittersum, van Martin; Reidsma, Pytrik; Ruben, Ruerd

2017-01-01

Despite its frequent use in policy discussions on future agricultural production, both the concept of the yield gap and its determinants are understood differently by economists and agronomists. This study provides a micro-level framework that disentangles and integrates agronomic and economic

ARTICLE - Path analysis of iron and zinc contents and others traits in cowpea

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Jeane de Oliveira Moura

2012-12-01

Full Text Available The objective of this study was to estimate the direct and indirect effects of agronomic and culinary traits on iron and zinc contents in 11 cowpea populations. Correlations between traits were estimated and decomposed into direct and indirect effects using path analysis. For the study populations, breeding for larger grain size, higher number of grains per pod, grain yield, reduced cooking time, and number of days to flowering can lead to decreases in the levels of iron and zinc in the grain. Genetic gains for the iron content can be obtained by direct selection for protein content by indirect effects on the number of grains per pod, 100-grain weight and grain yield. The positive direct effect of grain size and protein content on the zinc content indicates the possibility of simultaneous gain by combined selection of these traits.

Sewage sludge fertiliser use: implications for soil and plant copper evolution in forest and agronomic soils.

Science.gov (United States)

Ferreiro-Domínguez, Nuria; Rigueiro-Rodríguez, Antonio; Mosquera-Losada, M Rosa

2012-05-01

Fertilisation with sewage sludge may lead to crop toxicity and environmental degradation. This study aims to evaluate the effects of two types of soils (forest and agronomic), two types of vegetation (unsown (coming from soil seed bank) and sown), and two types of fertilisation (sludge fertilisation and mineral fertilisation, with a no fertiliser control) in afforested and treeless swards and in sown and unsown forestlands on the total and available Cu concentration in soil, the leaching of this element and the Cu levels in plant. The experimental design was completely randomised with nine treatments and three replicates. Fertilisation with sewage sludge increased the concentration of Cu in soil and plant, but the soil values never exceeded the maximum set by Spanish regulations. Sewage sludge inputs increased both the total and Mehlich 3 Cu concentrations in agronomic soils and the Cu levels in plant developed in agronomic and forest soils, with this effect pronounced in the unsown swards of forest soils. Therefore, the use of high quality sewage sludge as fertiliser may improve the global productivity of forest, agronomic and silvopastoral systems without creating environmental hazards. Copyright © 2012 Elsevier B.V. All rights reserved.

Evaluation of yield and yield components and some agronomic traits of white bean genotypes under Karaj climate

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M. Ebrahimi

2016-04-01

Full Text Available In order to study compatibility of 30 white bean genotypes under Karaj climate, an experiment was conducted based on randomized Complete Block Design with four replications. Evaluation and statistical analysis was performed for 18 important traits. Analysis of variance results showed that there are significant differences between varieties for all traits. Results of genotypes means comparison with Duncan’s multiple range test showed that genotype No. 29 was better than others in plant height, yield, and biological yield, seed no. per plant and pod weight traits. Simple correlation coefficients were significant between yield and weight of pod, biological yield, number of seed per plant, number of pod per plant, plant height, width of pod and number of seed per pod. Only pod length was negative correlated with yield between all investigated traits. Cluster analysis with UPGMA method arrangement genotypes into three groups. According to this experiment results we can recommend 29 and 30 genotypes for Karaj condition

Genotyping by sequencing for SNP-based linkage analysis and identification of QTLs linked to fruit quality traits in Japanese plum (Prunus salicina Lindl.)

Science.gov (United States)

Marker-assisted selection (MAS) in stone fruit (Prunus species) breeding is currently difficult to achieve due to the polygenic nature of themost relevant agronomic traits linked to fruit quality. Genotyping by sequencing (GBS), however, provides a large quantity of useful data suitable for finemapp...

Business success and psychological traits of housing developers

OpenAIRE

Mastura Jaafar; Azlan Raofuddin Nuruddin; Syed Putra Syed Abu Bakar

2014-01-01

Although the issues on entrepreneurship in the real estate industry are disparaging and have received little interest from global researchers, the significant roles played by the industry players warrant further investigation. The personal traits of the owners/managers are deemed to be the key factors to the business success of housing development firms. This paper examined the main determinants of successful business in the housing development sector under the lens of psychological traits of...

Breeding potential of S4 maize lines in topcrosses for agronomic and forage traits

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Mariana Martins Marcondes

2016-06-01

Full Text Available This study aimed to evaluate the performance of 46 maize lines (S4 obtained from crosses between the commercial hybrids Penta x P30F53 in topcrosses with the commercial simple cross hybrid Dow8460 (tester and checks (hybrids Penta, P30F53, Dow8460 and Status. The grain yield was evaluated in two environments in Guarapuava, Paraná State, and the effects of genotype, environment and genotype x environment interaction were significant. The grain yield of the topcross hybrids ranged from 8,416 to 13,428 kg ha-1. The agronomic characteristics of the forage and the bromatological characteristics of the silage were evaluated in environment 1. The green mass yield of the forage ranged from 48,767 to 87,714 kg ha-1 and the dry mass yield ranged from 14,749 to 26,130 kg ha-1. The neutral detergent fiber content ranged from 44.85 to 58.45% and the acid detergent fiber content ranged from 28.28 to 37.06%. The relative feed value of the silage ranged between 100.5 and 138.5. The tester, hybrid Dow8460, was efficient to discriminate the relative performance of the S4 lines in the topcrosses.

Evaluation of recurrent radiation with Cobalt 60 gamma rays on agronomic traits of barley (Hordeum Vulgare L.) in the R2M1 generation

International Nuclear Information System (INIS)

Vega G, M.G.

1994-01-01

The objective of this work was to evaluate the effect of recurrent radiation on agronomic traits in two barley varieties. The research was carried out at experimental fields pertaining to the Instituto de Investigacion Agropecuaria, Acuicola y Forestal of the Estado de Mexico (ICAMEX). The biological material was irradiated in the Gamma Cell 220 at the Instituto Nacional de Investigaciones Nucleares (ININ). The experimental design was divided plots in the randomized blocks, with four replications. The factor varieties (Cerro Prieto and Puebla) was assigned to the big plots mean while in the factor doses was assignated to the small plots (0, 10, 20, 30, 40 and 50 krad of gamma rays). The variables under study were: germination, number of shoots, plant height, incidence of Puccinia striiformis, days to flowering, days to physiological maturity, spike length and yield. The analysis of variance exhibited no significant differences between varieties for all the studied variables. Regarding to dose, most of the studied variables exhibited significant differences, except for incidence of Puccinia striiformis and days to flowering. The interaction variety x doses showed significance only for the variable days to flowering and days to physiological maturity. The mean separation by Tukey test at 0.05 and the regression analysis showed that the variables: germination, number of shoots, plant height, spike length and yield decreased as the dose increased. On the other hand in the variables incidence of Puccinia striiformis, days to flowering and days to physiological maturity exhibited a direct relationship with the dose. (Author)

Political Attitudes Develop Independently of Personality Traits

Science.gov (United States)

Hatemi, Peter K.; Verhulst, Brad

2015-01-01

The primary assumption within the recent personality and political orientations literature is that personality traits cause people to develop political attitudes. In contrast, research relying on traditional psychological and developmental theories suggests the relationship between most personality dimensions and political orientations are either not significant or weak. Research from behavioral genetics suggests the covariance between personality and political preferences is not causal, but due to a common, latent genetic factor that mutually influences both. The contradictory assumptions and findings from these research streams have yet to be resolved. This is in part due to the reliance on cross-sectional data and the lack of longitudinal genetically informative data. Here, using two independent longitudinal genetically informative samples, we examine the joint development of personality traits and attitude dimensions to explore the underlying causal mechanisms that drive the relationship between these features and provide a first step in resolving the causal question. We find change in personality over a ten-year period does not predict change in political attitudes, which does not support a causal relationship between personality traits and political attitudes as is frequently assumed. Rather, political attitudes are often more stable than the key personality traits assumed to be predicting them. Finally, the results from our genetic models find that no additional variance is accounted for by the causal pathway from personality traits to political attitudes. Our findings remain consistent with the original construction of the five-factor model of personality and developmental theories on attitude formation, but challenge recent work in this area. PMID:25734580

Political attitudes develop independently of personality traits.

Science.gov (United States)

Hatemi, Peter K; Verhulst, Brad

2015-01-01

The primary assumption within the recent personality and political orientations literature is that personality traits cause people to develop political attitudes. In contrast, research relying on traditional psychological and developmental theories suggests the relationship between most personality dimensions and political orientations are either not significant or weak. Research from behavioral genetics suggests the covariance between personality and political preferences is not causal, but due to a common, latent genetic factor that mutually influences both. The contradictory assumptions and findings from these research streams have yet to be resolved. This is in part due to the reliance on cross-sectional data and the lack of longitudinal genetically informative data. Here, using two independent longitudinal genetically informative samples, we examine the joint development of personality traits and attitude dimensions to explore the underlying causal mechanisms that drive the relationship between these features and provide a first step in resolving the causal question. We find change in personality over a ten-year period does not predict change in political attitudes, which does not support a causal relationship between personality traits and political attitudes as is frequently assumed. Rather, political attitudes are often more stable than the key personality traits assumed to be predicting them. Finally, the results from our genetic models find that no additional variance is accounted for by the causal pathway from personality traits to political attitudes. Our findings remain consistent with the original construction of the five-factor model of personality and developmental theories on attitude formation, but challenge recent work in this area.

URS Altiva – a new oat cultivar with high agronomic performance

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Itamar C. Nava

2016-09-01

Full Text Available The oat cultivar URS Altiva, developed from the simple cross ‘UFRGS 995090-2 x URS 21’, and released by the Oat Breeding Program of the Federal University of Rio Grande do Sul (UFRGS in 2015, presents high grain yield, high grain quality, desirable agronomic performance, and partial resistance to crown rust.

转GsCa2+-ATPase基因大豆主要农艺性状调查与分析%Investigation and Analysis of Main Agronomic Traits of Transgenic Soybean with GsCa2+-ATPase Gene

Institute of Scientific and Technical Information of China (English)

赵超越; 柏锡; 樊超; 林凡敏; 才华; 纪巍; 朱延明

2012-01-01

In order to evaluate the variation of the main agronomic traits between transgenic soybean and the control, the seed germination, seed shattering, yield traits, morphological and quality traits of three T3 transgenic soybean lines HF50-CA-1, HF55-CA-1 and HF55-CA-2 were investigated and analyzed. No obvious differences in seed germination,seed shattering,yield traits,morphological traits and protein content were found for transgenic soybeans. The oil content of HF50-CA-1 ,HF55-CA-1 were decreased by 1.01% and 0.56% compared with the control, while HF55-CA-2 had no obvious differences. This study provides an important genetic resource for the industrialization of alkali tolerant transgenic soybeans.%为对转基因大豆新株系的主要农艺性状进行科学评价,对已获得耐盐碱性状显著的转GsCa2 +-A TPase基因大豆的3个株系HF50-CA-1、HF55-CA-1、HF55-CA-2的T3植株进行种子萌发率、种子落粒性、产量性状、品质性状和形态性状的调查与分析.结果表明:在种子萌发率、种子落粒性、形态性状和产量性状上,3个转基因大豆株系与对照相比无显著差异.在品质性状上,3个转基因株系的蛋白含量与对照差异不显著.表明没有因导入耐盐碱基因而导致上述性状产生不良变化.油分含量与对照相比,株系HF50-CA-1和HF55-CA-1分别显著下降1.01％和0.56％,而HF55-CA-2株系则差异不显著.

Agronomic evaluation and quality characteristics of three ...

African Journals Online (AJOL)

Dr ADJOU

2016-11-02

Nov 2, 2016 ... known to be essential for human health (Schippers,. 2004). All parts of the .... Agronomic characteristic of three species of Cucurbitaceae cultivated. Species .... those reported in locust bean pulp (Dahouenon-. Ahoussi et al.

Effect of Water Stress and Spraying of Potassium Iodide on Agronomic Traits and Grain Yield of Bread Wheat (Tiriticum aistivum L. Genotypes

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N. Pooladsaz

2011-01-01

Full Text Available Abstract In order to study the effect of water stress and chemical desiccation (potassium iodide on grain yield and agronomic traits of 8 wheat genotypes, a field experiment was conducted using a split split plot design based on a randomized complete block design with three replications in Torogh Agricultural and Natural Resources Research Station (Mashhad, Iran in 2006-2007 and 2007-2008. Main plots were assigned to two levels of water stress treatments; D1: optimum irrigation, and D2: cessation of watering from anthesis to maturity stages. Sub plots were assigned to eight bread wheat genotypes: 9103, 9116, 9203, 9205, 9207, 9212, C-81-10 and Cross Shahi (drought sensitive; and photosynthetic conditions with two levels: P1: using of current photosynthesis and P2: inhibition of current photosynthesis were in sub-sub plots. The results showed that the effects of water stress and photosynthetic conditions on number of total florets per spike (NTF/S, seed set percentage (SSP, spike harvest index (SHI, duration of grain filling (DGF and grain yield (GY were significant. There was a significant difference between genotypes for spike dry weight at anthesis (SDWA, number of spikletes per spike (NSP/S, NTF/S, SSP, SHI, spike partitioning coefficient (SPC, plant height (PLH, spike length (SL, DGF and GY. 9103 genotype produced the most GY (7870 kg/ha under D1P1 treatment. The least GY ( 1114 kg/ha related to Cross Shahi cultivar under D2P2 treatment. Considering that C-81-10, 9103 and 9116 genotypes showed the highest grain yield, potential for reserves and remobilizations of assimilates under different irrigation conditions thus, these genotypes could be introduced as promising in breeding programs for arid and semi-arid regions. Keywords: Triticum aestivum L., Cessation of watering, Chemical Desiccation, Spike, Grain yield

Collection of rice mutants and application studies of their agronomic characters

International Nuclear Information System (INIS)

Sun Shuxiang; Jin Wei; Luo Qian; Sheng Ping; Huang Rongmin

1993-01-01

More than 1600 accessions of rice mutant germplasm have been collected since 1980, and 1142 accessions of mutants have been identified according to their agronomy and pattern characters. A part of mutants were compared with their original cultivars in eight main agronomic characters. The results showed that the agronomic characters of mutants induced by ionizing radiations changed to both positive and negative directions compared with their original cultivars. Only 6.3% mutants varied in single agronomic character, and 91.1% mutants varied in two to six agronomic characters. Tenetic analysis and Cellular observations were carried out for two kinds of early mutants. It showed that early mutants 'Yuan Feng Zao' are controlled by two independent and incomplete dominant genes. For the dwarf, the reduction of the number of longitudinal cell layers causes the stem shorter and the increase of the number of horizontal cell layers causes the stem wall thicker. More than 100 preserved accessions of mutants were supplied to breeding units as parents or for genetic studies. Sixteen cultivars (lines) were bred from the parents which played an important role in raising the output of rice production

Genetic disparity and relationship among quantitatively inherited yield related traits in diallel crosses of upland cotton

International Nuclear Information System (INIS)

Bibi, M.; Khan, N.U.; Mohammad, F.; Gul, R.; Idrees, M.; Sayal, O.U.; Khakwani, A.A.; Khan, I.A.

2011-01-01

In quantitative genetics, development of high yielding genotypes from parental cultivars of same ancestry is some what confusing as compared to genetically diverse parents. However, sufficient recombinations through allelic variations in mating of closely-related populations result in superior agronomic performance. Development of improved cotton genotypes is one of the prime objectives of any cotton breeding programmes. Genetic divergence and yield potential of parental cotton genotypes versus their diallel hybrids, relationship of yield with various morpho-yield traits and their heritability were studied in 8 X 8 F/sub 1/ diallel hybrids and their parental cultivars in Gossypium hirsutum L. during 2008-09 at Khyber Pakhtunkhwa Agricultural University, Peshawar, Pakistan. Highly significant (p less than or equal to 0.01) differences were observed among parental genotypes and F/sub 1/ populations for all the traits. Results revealed that F/sub 1/ hybrids i.e., CIM-506 X CIM-554, CIM-473 X CIM-554, CIM-446 X CIM-496 and CIM-446 X CIM-554 produced significantly higher number of sympodia, bolls per populations showed incredible performance for plant height, locules per boll and seeds plant and seed cotton yield. Some F/sub 1/ per locule. Seed cotton yield manifested positive association with morpho-yield traits which also accounted for greater genetic variations to yield being dependent trait. Heritabilities (broad sense) were moderate to high in magnitude for all populations with larger genetic potential, positive relationship between yield and yield traits. Results revealed that F1 contributing traits and moderate to high heritability can guide intensive selection and improvement per se in segregating populations. (author)

Incidence of latex harvesting technologies on agronomic and ...

African Journals Online (AJOL)

Incidence of latex harvesting technologies on agronomic and physiological parameters and profitability of some rapid metabolic class clones of rubber tree ( Hevea brasiliensis ) in southwestern Côte d'Ivoire.

MORPHOLOGICAL AND AGRONOMICAL CHARACTERISTICS OF SOME WILD AND CULTIVATED ISATIS SPECIES

OpenAIRE

KIZIL, Süleyman

2006-01-01

The study evaluated Isatis tinctoria, I. constricta, I. glauca, I. cochlearis, I. aucheri and I. demiriziana during 2002-03 and 2003-04 growing seasons for different agronomic characteristics affecting the percentage of dye in them. The results showed wide variations in the agronomic characteristics of Isatis constricta, Isatis cochlearis, Isatis aucheri, Isatis demiriziana collected from wild; compared to culture Isatis tinctoria and Isatis glauca. I. tinctoria showed early emergence (36 day...

Assessment of the Agronomic Feasibility of Bioenergy Crop Cultivation on Marginal and Polluted Land: A GIS-Based Suitability Study from the Sulcis Area, Italy

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Giuseppe Pulighe

2016-10-01

Full Text Available In the context of environmental sustainability there has been an increasing interest in bioenergy production from renewable resources, and is expected that European biofuel production from energy crops will increase as a consequence of the achievement of policy targets. The aim of this paper is to assess the agronomic feasibility of biomass crop cultivation to provide profitable renewable feedstocks in a marginal and heavy-metal polluted area located in the Sulcis district, Sardinia (Italy. Results from literature review and unpublished data from field trials carried out in Sardinia were analysed to establish the main agronomic traits of crops (e.g., yield potential and input requirements. A Geographical Information System (GIS-based procedure with remotely sensed data is also used to evaluate the land suitability and the actual land use/cover, considering a future scenario of expansion of energy crops on these marginal areas avoiding potential conflicts with food production. The results of the review suggests that giant reed, native perennial grasses and milk thistle are the most suitable energy crops for this area. The land suitability analysis shows that about 5700 ha and 1000 ha could be available for feedstock cultivation in the study area and in the most polluted area, respectively. The results obtained from land suitability process and agronomic evaluation will serve as a base to support technical and economical feasibility studies, as well as for the evaluation of environmental sustainability of the cultivation in the study area.

Efficiency improvement for a sustainable agriculture : the integration of agronomic and farm economics approaches

NARCIS (Netherlands)

Koeijer, de T.J.

2002-01-01

Keywords: Sustainable farming systems, Agronomic efficiency, Economic efficiency, Environmental efficiency, Sustainability index, Interdisciplinary analysis.

The objective of the research described in this thesis was to determine what role improved agronomic efficiency can play in

Agronomic performance of old soybean variety 'Altona' derived mutants

International Nuclear Information System (INIS)

Hodosne, K.G.; Heszky, L.E.

2001-01-01

An induced mutation program has been initiated at the Department of Genetics and Plant Breeding to develop early maturing cultivars with good yielding capacity. Some new mutants have been produced by irradiation of variety Altona with 60 Co gamma rays. Ten years of breeding resulted in two new mutant varieties named 'Noventa' and 'Gate 511'. The present study deals with agronomic performance of these mutants. Registered soybean varieties Altona and 'McCall' as well as Altona derived mutants (Gate 511 and Noventa) have been compared

Agronomic evaluation of guano sources by means of isotope techniques

International Nuclear Information System (INIS)

Zapata, F.; Arrillaga, J.L.

2002-01-01

Many soils of the tropics and subtropics under continuous cultivation are very infertile, thus poor yields are obtained and little crop residues remain to protect the soils from degrading erosion. External nutrient inputs in the form of chemical fertilizers, organic materials and other nutrients sources are essential for developing sustainable agricultural production systems. As chemical fertilizers are costly for developing countries with insufficient foreign currency for their purchase and their supplies are limited and irregular for small landholders, alternative nutrient sources must be sought and evaluated for use in dominant agricultural production systems. Locally available organic materials of different origin are potential sources of nutrients. One such source with high agronomic potential is guano. The present study was carried out to evaluate the agronomic effectiveness of two guano materials of different origin (Zaire and Peru) as sources of nitrogen and phosphorus as compared to chemical fertilizers (ammonium sulfate and triple superphosphate) using isotopic ( 15 N and 32 P) techniques. Using the classical method of comparing dry matter weight and P uptake, no significant differences among the tested guano sources were found. The use of the isotopic techniques allowed a quantitative assessment of the N and P supply to crops. Both guano materials were found to be good sources of N but in contrast were poor sources of phosphorus. In addition, from the agronomic evaluation, it was found that the guano of Zaire and the ammonium sulfate were N sources of equivalent efficiency and the guano of Peru even slightly better than the ammonium sulfate. As expected, P in the single superphosphate was as available to the P in the triple superphosphate. However, the substitution ratios for the guano sources were relatively high. Thus, 1 kg P as single superphosphate was equivalent to 9.5 kg P as guano from Zaire or 12.5 kg P as guano from Peru. Further field trials in

Relationships and variability of agronomic and physiological ...

African Journals Online (AJOL)

This study was conducted to determine the variability, heritability and correlations among agronomic and physiological characters of mungbean (Vigna radiata (L.) Wilczek) and to identify their direct and indirect effects on seed yield. Fifty six mungbean accessions were evaluated at Suranaree University of Technology Farm ...

The agronomic science of spatial and temporal water management:How much, when and where

Science.gov (United States)

The agronomic sciences are those that are applied to soil and water management and crop production, including soil, water and plant sciences and related disciplines. The science of spatial and temporal water management includes many agronomic science factors, including soil physics, biophysics, plan...

[Correlation analysis of major agronomic characters and the polysaccharide contents in Dendrobium officinale].

Science.gov (United States)

Zhang, Lei; Zheng, Xi-Long; Qiu, Dao-Shou; Cai, Shi-Ke; Luo, Huan-Ming; Deng, Rui-Yun; Liu, Xiao-Jin

2013-10-01

In order to provide theoretical and technological basis for the germplasm innovation and variety breeding in Dendrobium officinale, a study of the correlation between polysaccharide content and agronomic characters was conducted. Based on the polysaccharide content determination and the agronomic characters investigation of 30 copies (110 individual plants) of Dendrobium officinale germplasm resources, the correlation between polysaccharide content and agronomic characters was analyzed via path and correlation analysis. Correlation analysis results showed that there was a significant negative correlation between average spacing and polysaccharide content, the correlation coefficient was -0.695. And the blade thickness was positively correlated with the polysaccharide content, but the correlation was not significant. The path analysis results showed that the stem length was the maximum influence factor to the polysaccharide, and it was positive effect, the direct path coefficient was 1.568. According to thess results, the polysaccharide content can be easily and intuitively estimated by the agronomic characters investigating data in the germpalsm resources screening and variety breeding. Therefore, it is a visual and practical technology guidance in quality variety breeding of Dendrobium officinale.

Rice varietal screening: Relationship between certain Agronomic ...

African Journals Online (AJOL)

... between September 1994 and June 1996 to study the relationship between iron toxicity and some agronomic parameters, with the objective of improving the method of screening. Twenty eight varieties (treatments) were transplanted, 21 days after sowing, into adjacent iron toxic and non-toxic fields in Korhogo in northern ...

Agronomic characters and lodging resistance of plant height mutants of rice

International Nuclear Information System (INIS)

Zhang Zhonggui; Wu Yuejin; Liu Binmei; Xu Xue; Zhang Lili; Wang Min

2010-01-01

Fourteen plant height mutants of Nipponbare were used to study the effect of plant height on the agronomic characters and lodging resistance. The results indicated that the plant height was positively correlated with spike length, third internode length, height of gravity center, fresh weight of main stem, dry weight of main stem, thousand-grain weight, grain-yield per plant and biological yield, and the second internode length. Meanwhile, plant height played an important role in lodging resistance, it was significantly positively correlated with lodging index and negatively correlated with bending moment and culm type index. The correlation between agronomic characters and lodging resistance showed that several agronomic characters had strong impact on the lodging resistance, such as spike length, height of gravity center, basal internode length ( first and second internode), fresh and dry weight of main stem, dry weight of basal internode, seed setting, thousand-grain weight, grain-weight per plant and biological yield. (authors)

Tomato second cycle hybrids as a source of genetic variability for fruit quality traits

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Pereira da Costa JH

2016-11-01

Full Text Available The objective of this study was to investigate the phenotypic and molecular variability in a F2 generation derived from a SCH (Second Cycle Hybrid in order to detect QTLs for some fruit traits of tomato. Genome coverage at different levels was achieved by three types of molecular markers (polypeptides, sequence-related amplified polymorphism-SRAP and amplified restriction fragment polymorphism - AFLP. Different degrees of polymorphism were detected by SRAP and AFLP at the DNA structure level and also by polypeptides at the DNA expression level. The first two markers, associated with phenotypic variation, detected QTLs involved in important agronomic traits such as fruit shelf life, soluble solids content, pH, and titratable acidity. New gene blocks originated by recombination during the first cycle of crossing were detected. This study confirmed that the observed phenotypic differences represent a new gene rearrangement and that these new gene blocks are responsible for the presence of the genetic variability detected for these traits.

Variation among chlorine concentration ratios for native and agronomic plants

International Nuclear Information System (INIS)

Sheppard, S.C.; Evenden, W.G.; Macdonald, C.R.

1999-01-01

Variation among plant/soil concentration ratios (CRs) for important radionuclides requires attention because it is a major source of uncertainty in nuclear environmental safety assessments. For agronomic plants, variation among plant species is easy to deal with because there are relatively few species. In natural settings, there are vastly more species and the question becomes how to develop representative statistical distributions of CRs. Chlorine (Cl) is a good element with which to address this problem, because 36 Cl is a key radionuclide in nuclear waste disposal and yet stable Cl is easily measured in the environment. We measured CRs (dry weight basis) for Cl among edible parts of agronomic plants at one site, and found a geometric mean (GM) of 10, a geometric standard deviation (GSD) of 1.9 and a range of 5-66. When the GM was weighted by the relative contributions of the various plants to the human diet, it rose to 16. Among native plants at five sites, each site representative of a specific environment, the GMs were 4.0-13 and the GSDs were 2.9-6.2. The CRs for individual species ranged from 0.8 to 170. However, when weighted by relative contributions of the plants to selected animal diets, the GMs were as high as 50. The conclusions are that: the variation in CR for agronomic plants is a subset of the variation among native or all plants, variation among species (the GSD) can be sixfold, and variation among species is large enough that typical diets of specific animals could expose them to several-fold higher amounts of Cl (or 36 Cl) than expected from generic CR values. (Copyright (c) 1999 Elsevier Science B.V., Amsterdam. All rights reserved.)

Responses of Crop Water Use Efficiency to Climate Change and Agronomic Measures in the Semiarid Area of Northern China.

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Jingting Zhang

Full Text Available It has long been concerned how crop water use efficiency (WUE responds to climate change. Most of existing researches have emphasized the impact of single climate factor but have paid less attention to the effect of developed agronomic measures on crop WUE. Based on the long-term field observations/experiments data, we investigated the changing responses of crop WUE to climate variables (temperature and precipitation and agronomic practices (fertilization and cropping patterns in the semi-arid area of northern China (SAC during two periods, 1983-1999 and 2000-2010 (drier and warmer. Our results suggest that crop WUE was an intrinsical system sensitive to climate change and agronomic measures. Crops tend to reach the maximum WUE (WUEmax in warm-dry environment while reach the stable minimum WUE (WUEmin in warm-wet environment, with a difference between WUEmax and WUEmin ranging from 29.0%-55.5%. Changes in temperature and precipitation in the past three decades jointly enhanced crop WUE by 8.1%-30.6%. Elevated fertilizer and rotation cropping would increase crop WUE by 5.6-11.0% and 19.5-92.9%, respectively. These results indicate crop has the resilience by adjusting WUE, which is not only able to respond to subsequent periods of favorable water balance but also to tolerate the drought stress, and reasonable agronomic practices could enhance this resilience. However, this capacity would break down under impact of climate changes and unconscionable agronomic practices (e.g. excessive N/P/K fertilizer or traditional continuous cropping. Based on the findings in this study, a conceptual crop WUE model is constructed to indicate the threshold of crop resilience, which could help the farmer develop appropriate strategies in adapting the adverse impacts of climate warming.

Responses of Crop Water Use Efficiency to Climate Change and Agronomic Measures in the Semiarid Area of Northern China.

Science.gov (United States)

Zhang, Jingting; Ren, Wei; An, Pingli; Pan, Zhihua; Wang, Liwei; Dong, Zhiqiang; He, Di; Yang, Jia; Pan, Shufen; Tian, Hanqin

2015-01-01

It has long been concerned how crop water use efficiency (WUE) responds to climate change. Most of existing researches have emphasized the impact of single climate factor but have paid less attention to the effect of developed agronomic measures on crop WUE. Based on the long-term field observations/experiments data, we investigated the changing responses of crop WUE to climate variables (temperature and precipitation) and agronomic practices (fertilization and cropping patterns) in the semi-arid area of northern China (SAC) during two periods, 1983-1999 and 2000-2010 (drier and warmer). Our results suggest that crop WUE was an intrinsical system sensitive to climate change and agronomic measures. Crops tend to reach the maximum WUE (WUEmax) in warm-dry environment while reach the stable minimum WUE (WUEmin) in warm-wet environment, with a difference between WUEmax and WUEmin ranging from 29.0%-55.5%. Changes in temperature and precipitation in the past three decades jointly enhanced crop WUE by 8.1%-30.6%. Elevated fertilizer and rotation cropping would increase crop WUE by 5.6-11.0% and 19.5-92.9%, respectively. These results indicate crop has the resilience by adjusting WUE, which is not only able to respond to subsequent periods of favorable water balance but also to tolerate the drought stress, and reasonable agronomic practices could enhance this resilience. However, this capacity would break down under impact of climate changes and unconscionable agronomic practices (e.g. excessive N/P/K fertilizer or traditional continuous cropping). Based on the findings in this study, a conceptual crop WUE model is constructed to indicate the threshold of crop resilience, which could help the farmer develop appropriate strategies in adapting the adverse impacts of climate warming.

agronomic performance of introduced banana varieties in lowlands

African Journals Online (AJOL)

jen

this study was to evaluate the agronomic performance of FHIA hybrids in lowlands of Rwanda. Completely ... L'objectif de cette étude était d'évaluer la performance agronomique de FHIA hybride ..... major Musa types present in Asia and the.

Analysis of QTLs for yield-related traits in Yuanjiang common wild rice (Oryza rufipogon Griff.).

Science.gov (United States)

Fu, Qiang; Zhang, Peijiang; Tan, Lubin; Zhu, Zuofeng; Ma, Dan; Fu, Yongcai; Zhan, Xinchun; Cai, Hongwei; Sun, Chuanqing

2010-02-01

Using an accession of common wild rice (Oryza rufipogon Griff.) collected from Yuanjiang County, Yunnan Province, China, as the donor and an elite cultivar 93-11, widely used in two-line indica hybrid rice production in China, as the recurrent parent, an advanced backcross populations were developed. Through genotyping of 187 SSR markers and investigation of six yield-related traits of two generations (BC(4)F(2) and BC(4)F(4)), a total of 26 QTLs were detected by employing single point analysis and interval mapping in both generations. Of the 26 QTLs, the alleles of 10 (38.5%) QTLs originating from O. rufipogon had shown a beneficial effect for yield-related traits in the 93-11 genetic background. In addition, five QTLs controlling yield and its components were newly identified, indicating that there are potentially novel alleles in Yuanjiang common wild rice. Three regions underling significant QTLs for several yield-related traits were detected on chromosome 1, 7 and 12. The QTL clusters were founded and corresponding agronomic traits of those QTLs showed highly significant correlation, suggesting the pleiotropism or tight linkage. Fine-mapping and cloning of these yield-related QTLs from wild rice would be helpful to elucidating molecular mechanism of rice domestication and rice breeding in the future. Copyright 2010 Institute of Genetics and Developmental Biology and the Genetics Society of China. Published by Elsevier Ltd. All rights reserved.

Agriculture in Ancient and its influence on Development of Agronomics and Welfare of the States

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В. В. Шелепов

2011-02-01

Full Text Available On the basis of literary sources history of origin and development of agriculture is rotined in Ancient. The first Civilizations arose up on fat streamside lands of the large rivers: Nile, Euphrates, tiger, Inda, Ganga and other Earths and plenty of water are fertile during an overflow, a warm climate allowed to Ancient civilizations to grow 2-3 harvests in a year. For the receipt of high harvests, a man had to study the modes of overflow of the rivers, look after heavenly bodies, determine the areas of scopes and terms of leadthrough of the field works. The decision of these questions resulted in the origin of agronomics, astronomy, mathematics. Large harvests were instrumental in the origin of peculiar, enriching of the states, to development of trade and culture on the whole. Riches of country and overpopulation resulted in the origin of wars which one states perished as a result of, second – blossomed. Scientists consider that a high culture, intensive exploitation of soils and aggressiveness of man, brought the most Ancient Civilizations over to the ecological crisis and their elimination.

Personality traits and chronic disease: implications for adult personality development.

Science.gov (United States)

Sutin, Angelina R; Zonderman, Alan B; Ferrucci, Luigi; Terracciano, Antonio

2013-11-01

Personality traits have been associated with chronic disease. Less is known about the longitudinal relation between personality and disease and whether chronic disease is associated with changes in personality. Method. Participants from the Baltimore Longitudinal Study of Aging (N = 2,008) completed the Revised NEO Personality Inventory and a standard medical interview at regularly scheduled visits; the Charlson Comorbidity Index, a weighted sum of 19 serious diseases, was derived from this interview. Using data from 6,685 visits, we tested whether personality increased risk of disease and whether disease was associated with personality change. Measured concurrently, neuroticism and conscientiousness were associated with greater disease burden. The impulsiveness facet of neuroticism was the strongest predictor of developing disease across the follow-up period: For every standard deviation increase in impulsiveness, there was a 26% increased risk of developing disease and a 36% increased risk of getting more ill. Personality traits changed only modestly with disease: As participants developed chronic illnesses, they became more conservative (decreased openness). Discussion. This research indicates that personality traits confer risk for disease, in part, through health-risk behaviors. These traits, however, were relatively resistant to the effect of serious disease.

Genome-enabled predictions for binomial traits in sugar beet populations.

Science.gov (United States)

Biscarini, Filippo; Stevanato, Piergiorgio; Broccanello, Chiara; Stella, Alessandra; Saccomani, Massimo

2014-07-22

Genomic information can be used to predict not only continuous but also categorical (e.g. binomial) traits. Several traits of interest in human medicine and agriculture present a discrete distribution of phenotypes (e.g. disease status). Root vigor in sugar beet (B. vulgaris) is an example of binomial trait of agronomic importance. In this paper, a panel of 192 SNPs (single nucleotide polymorphisms) was used to genotype 124 sugar beet individual plants from 18 lines, and to classify them as showing "high" or "low" root vigor. A threshold model was used to fit the relationship between binomial root vigor and SNP genotypes, through the matrix of genomic relationships between individuals in a genomic BLUP (G-BLUP) approach. From a 5-fold cross-validation scheme, 500 testing subsets were generated. The estimated average cross-validation error rate was 0.000731 (0.073%). Only 9 out of 12326 test observations (500 replicates for an average test set size of 24.65) were misclassified. The estimated prediction accuracy was quite high. Such accurate predictions may be related to the high estimated heritability for root vigor (0.783) and to the few genes with large effect underlying the trait. Despite the sparse SNP panel, there was sufficient within-scaffold LD where SNPs with large effect on root vigor were located to allow for genome-enabled predictions to work.

Use of swine wastewater in oilseed radish crop: agronomic and environmental aspects

Directory of Open Access Journals (Sweden)

Thaisa Pegoraro

2014-12-01

Full Text Available Swine effluent has been applied to soils to promote nutrient cycling and reduce the uncontrolled disposal of effluents into bodies of water. However, the use of these effluents on various crops has raised environmental and public health concerns. Oilseed radish crop (Raphanus sativus L. is a winter crop planted in no-tillage systems as a green fertilizer that also can be used for biodiesel, and it requires high levels of nutrients for its development. Thus, the present study aimed to evaluate the environmental and agronomic effects of the application of swine wastewater on oilseed radish. The experiment was conducted in a 0.162 ha area with the following treatments: unirrigated (rainfed, irrigated, and fertilized with swine wastewater (370 m3 ha-1 cycle-1. After each rainfall event, analyses were conducted for the main macro and micronutrients in the runoff and percolated material from drainage lysimeters. Changes in the physical and chemical characteristics of the soil were also analyzed, as were the agronomic and nutritional indices of the dry crop phytomass in full blooming stage. Application of swine wastewater at a level of 370 m3 ha-1 produces a crop with better agronomic quality. Over the long term, however, caution should be taken regarding the surface runoff of NO3-, P, K, Mn and total salts and the percolation of NO3-, Na and Cu. Moreover, the rainfall occurred one day after fertigation contributed to the increase of the levels of P, K, Na, Cu, Zn and Mn in the percolated material.

Culinary and sensory traits diversity in the Spanish Core Collection of common beans (Phaseolus vulgaris L.)

Energy Technology Data Exchange (ETDEWEB)

Rivera, A.; Casquero, P.A.; Mayo, S.; Almirall, A.; Plans, M.; Simó, J.; Romero-del-Castillo, R.; Casañas, F.

2016-11-01

The Spanish National Plant Genetic Resource Center’s core collection of bean germplasm includes 202 accessions selected from more than 3000 accessions in function of passport data, seed phenotype, genetic background, and agronomic traits. To acquire more useful information about these accessions, we cultivated and characterized them for sensory and culinary traits. We found considerable variation for culinary and sensory traits of the cooked beans (mean coefficients of variation: 41% for the sensory traits and 40% for the culinary traits). The large dataset enabled us to study correlations between sensory and culinary traits and among these traits and geographic origin, seed color, and growth habit. Greater proportion of white in the seed coat correlated positively with brightness and negatively with mealiness (r=0.60, r=-0.60, p<0.001, respectively). Mealiness correlated negatively with seed-coat roughness and rate of water absorption (r=-0.60, r=-0.53, p<0.001, respectively). Materials of Andean origin had lower seed-coat brightness (p<0.01) and seed-coat roughness, and greater seed-coat perceptibility, mealiness, flavor, and aroma (p<0.001) than materials of Mesoamerican origin. Growth habit failed to correlate with culinary or sensory traits. Breeders can benefit from the information about this core collection available at www.crf.inia.es/crfesp/paginaprincipaljudia.asp. (Author)

Farmers Agronomic Practice in Management of the Tomato ...

African Journals Online (AJOL)

The study assessed farmers' awareness of tomato yellow leaf curl virus (TYLCV) disease and their agronomic and disease management practices in the Efutu municipality, Komenda-Edina-Eguafo-Abirem (KEEA), and Mfantseman districts which are leading tomato producing centres in the Central Region of Ghana.

Biological, ecological and agronomic significance of plant phenolic ...

African Journals Online (AJOL)

Our understanding of some phenolic compounds in the last few decades has greatly improved. However, their biological, ecological and agronomical significance in the rhizosphere of most symbiotic legumes is much less clear. Further understanding of these biomolecules will increase our knowledge of their contribution in ...

Integrating Agronomic Principles with Management Experience in Introductory Agronomy.

Science.gov (United States)

Vorst, J. J.

1989-01-01

Explains the use of a cropping systems project to teach agronomic principles and crop management techniques, and to enhance communication skills. Provides a sample progress report instructions sheet which was used for the project. (Author/RT)

Development and tests of short versions of the Youth Psychopathic traits Inventory and the Youth Psychopathic traits Inventory-Child Version

NARCIS (Netherlands)

van Baardewijk, Y.; Andershed, H.; Stegge, G.T.M.; Nilsson, K.W.; Scholte, E.; Vermeiren, R.R.J.M.

2010-01-01

The adolescent Youth Psychopathic Traits Inventory (YPI) and its child version (YPI-CV) are sound but lengthy instruments for measuring psychopathic traits in youths. The current study develops psychometrically strong short versions of these instruments. Samples used for item reduction were

Quantitative trait loci for behavioural traits in chicken

NARCIS (Netherlands)

Buitenhuis, A.J.; Rodenburg, T.B.; Siwek, M.Z.; Cornelissen, S.J.B.; Nieuwland, M.G.B.; Crooijmans, R.P.M.A.; Groenen, M.A.M.; Koene, P.; Bovenhuis, H.; Poel, van der J.J.

2005-01-01

The detection of quantitative trait loci (QTL) of behavioural traits has mainly been focussed on mouse and rat. With the rapid development of molecular genetics and the statistical tools, QTL mapping for behavioural traits in farm animals is developing. In chicken, a total of 30 QTL involved in

Semi-dwarf tef lines for high seed yield and lodging tolerance in ...

African Journals Online (AJOL)

The grain of tef is not only nutritious but also gluten-free, the cause for celiac disease, which affects humans world wide. The objective of this study was to evaluate the morpho-agronomic performance of newly developed semi-dwarf tef genotypes for grain yield and yield related agronomic traits under diverse environmental ...

Construction of chromosome segment substitution lines enables QTL mapping for flowering and morphological traits in Brassica rapa

Directory of Open Access Journals (Sweden)

Xiaonan eLi

2015-06-01

Full Text Available Chromosome segment substitution lines (CSSLs represent a powerful method for precise quantitative trait loci (QTL detection of complex agronomical traits in plants. In this study, we used a marker-assisted backcrossing strategy to develop a population consisting of 63 CSSLs, derived from backcrossing of the F1 generated from a cross between two Brassica rapa subspecies: ‘Chiifu’ (ssp. pekinensis, the Brassica A genome-represented line used as the donor, and ‘49caixin’ (ssp. parachinensis, a non-heading cultivar used as the recipient. The 63 CSSLs covered 87.95% of the B. rapa genome. Among them, 39 lines carried a single segment; 15 lines, two segments; and nine lines, three or more segments of the donor parent chromosomes. To verify the potential advantage of these CSSL lines, we used them to locate QTL for six morphology-related traits. A total of 58 QTL were located on eight chromosomes for all six traits: 17 for flowering time, 14 each for bolting time and plant height, 6 for plant diameter, 2 for leaf width, and 5 for flowering stalk diameter. Co-localized QTL were mainly distributed on eight genomic regions in A01, A02, A05, A06, A08, A09, and A10, present in the corresponding CSSLs. Moreover, new chromosomal fragments that harbored QTL were identified using the findings of previous studies. The CSSL population constructed in our study paves the way for fine mapping and cloning of candidate genes involved in late bolting, flowering, and plant architecture-related traits in B. rapa. Furthermore, it has great potential for future marker-aided gene/QTL pyramiding of other interesting traits in B. rapa breeding.

Genetic Diversity of Iranian and Exotic Sainfoin Accessions (Onobrychis viciifolia Scop Based on Morphological Traits

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M. Zarabiyan

2016-12-01

Full Text Available Sainfoin (Onobrychis viciifolia Scop. is widely grown as forage and pasture legume in Iran and is tolerant to environmental stresses. To investigate the genetic diversity among 56 accessions of sainfoin germplasm (including 46 Iranian and 10 foreign based on morphological and agronomic characteristics, present experiment was conducted as randomized complete block design with three replications in Isfahan University of Technology Research Farm during 2010-2011. The results of analysis of variance indicated considerable variation between studied germplasm for all traits and the better performance for Iranian accessions. The estimation of broad sense heritability for plant height, number of stems per plant, number of stems per meter square and number of nods per stem was high suggesting contribution of the major genes for controlling these traits. On the basis of means comparison, the forage yield was greatest for the first cutting as compared to the second cutting. Also the highest yield obtained from second year. Regarding the palatability (based on leaf to stem ratio the exotic accessions had higher values. Developing of superior cultivars may be possible through combining high yield and palatability in breeding programs.

Personality Traits, Ego Development, and the Redemptive Self.

Science.gov (United States)

Guo, Jen; Klevan, Miriam; McAdams, Dan P

2016-09-20

Life narratives are the internalized stories that people construct to provide meaning, purpose, and coherence in their lives. Prior research suggests that psychologically healthy and socially engaged adults generally narrate their lives in a prototypical fashion labeled the redemptive self, consisting of five themes: (a) a sense of childhood advantage, (b) empathy for others' sufferings, (c) moral steadfastness, (d) turning of negative events into positive outcomes (redemption sequences), and (e) prosocial goals. The current study examines trait correlates of the redemptive self in 157 late-midlife adults. Summing thematic scores across 12 life story interview scenes, the redemptive self was positively associated with four of the Big Five traits: extraversion, conscientiousness, agreeableness, and emotional stability, but unrelated to cognitive features of personality, as assessed on openness and ego development. The findings suggest those with positive socio-emotional personality traits, but not necessarily a proclivity for sophisticated thoughts, tend to have redemptive life stories. © 2016 by the Society for Personality and Social Psychology, Inc.

Screening of Gladiolus germplasm for agronomic performance and ...

African Journals Online (AJOL)

A field experiment was conducted to evaluate the agronomic performance and resistance of Gladiolus germplasm against corm rot disease caused by Fusarium oxysporum Schlecht. f. sp. gladioli (L. Masey) W.C. Snyder & H.N. Hans. Among the 23 Gladiolus varieties tested, Glad Red exhibited the highest spike length of 55 ...

The agronomic landspreading of coal bottom ash: using a regulated solid waste as a resource

Energy Technology Data Exchange (ETDEWEB)

Sell, N; McIntosh, T; Severance, C; Peterson, A

1989-02-01

Within the US, approximately 8860 Mg of dry coal bottom ash is generated daily, the majority of which is disposed of by landfilling. The disposal cost varies significantly depending on location. In Wisconsin, for example, in 1987 public landfill disposal costs ranged from 8.90 US dollars to 30 US dollars per Mg. However, bottom ash appears to be an acceptable soil amendment which may alter texture and improve tilth by making clay soils more friable and decreasing crust formation. If a generic exemption for this material can be developed with the appropriate regulatory bodies, use of coal bottom ash as a soil amendment has societal and economic advantages. This paper describes the key point of an agronomic management plant. An economic comparison indicates that, based on 1987 costs, agronomic use is only 38% as costly as landfill disposal. 14 refs., 5 tabs.

State and Trait Effects on Individual Differences in Children's Mathematical Development

Science.gov (United States)

Bailey, Drew H.; Watts, Tyler W.; Littlefield, Andrew K.; Geary, David C.

2015-01-01

Substantial longitudinal relations between children's early mathematics achievement and their much later mathematics achievement are firmly established. These findings are seemingly at odds with studies showing that early educational interventions have diminishing effects on children's mathematics achievement across time. We hypothesized that individual differences in children's later mathematical knowledge are more an indicator of stable, underlying characteristics related to mathematics learning throughout development than of direct effects of early mathematical competency on later mathematical competency. We tested this hypothesis in two longitudinal data sets, by simultaneously modeling effects of latent traits (stable characteristics that influence learning across time) and states (e.g., prior knowledge) on children's mathematics achievement over time. Latent trait effects on children's mathematical development were substantially larger than state effects. Approximately 60% of the variance in trait mathematics achievement was accounted for by commonly used control variables, such as working memory, but residual trait effects remained larger than state effects. Implications for research and practice are discussed. PMID:25231900

Effect of Sowing Date on Some Agronomic Characteristics and Seed Yield of Winter Wheat Cultivars

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A. Ganbari

2012-08-01

Full Text Available To evaluate the effect of sowing dates on yield, yield components and some agronomic characteristics of four winter wheat cultivars and also their phenological changes, a factorial experiment based on randomized complete block design with three replications was carried out at the Agriculture Research Station of Ardabil (Iran during 2009 growing season. First factor consisted of four wheat cultivars (Azar2, Sabalan, Sardari and Zagros and second factor consisted of four sowing dates (1st, 10th, 20th and 30th of September. The results showed that sowing date had significant effect on the number of spikes, the number of seed per spike, 1000-seed weight, germination percentage, days to spike appearance, days to ripening, growing degree days, biological yield, seed yield and harvest index. The highest and lowest seed yields of wheat were obtained from sowing date of the September the first (4616 kg/ha and sowing date of September 30th (2197 kg/ha respectively. Delaying planting decreased the number of spikes per m2 and 1000-seed weight. Cultivars had significant effect on all of the traits measured, except leaf number, fertile and non-fertilie tillers. The highest and the lowest seed yields were obtained from Sabalan (4750 kg/ha and Zagros (2757 kg/ha cultivars respectively. Interaction of sowing date and cultivar were significant on all of traits measured, except stem height, the leaf number, the number of spikes, 1000-seed weight and seed yield (P

The Application of Soil-Agroclimatic Index for Assessing the Agronomic Potential of Arable Lands in the Forest-Steppe Zone of Russia

Science.gov (United States)

Bulgakov, D. S.; Rukhovich, D. I.; Shishkonakova, E. A.; Vil'chevskaya, E. V.

2018-04-01

An assessment of the agronomic potential of arable lands in the forest-steppe zone of Russia (by the example of separate soil-agronomic districts) on the basis of the soil-agroclimatic index developed under the supervision of I.I. Karmanov is considered. The agricultural areas (64) separated on the territory of Russia and characterizing soil-agroclimatic conditions for cultivation of major and accompanying crops are differentiated into soil-agronomic districts (SADs) with due account for the administrative division of the country. A large diversity of agroclimatic and agronomical conditions creates the prerequisites for the inclusion of administrative regions into different SADs. The SADs concept implies a detailed analysis of information on the soil properties, geomorphic conditions, and farming conditions. The agronomic potential for major crops in the key SADs in the forest-steppe zone of the East European Plain (Voronezh and Penza oblasts) is high, though it is 25-30% lower than that in the North Caucasus (for winter wheat, sugar beet, sunflower, and spring barley) and in Kaliningrad oblast (for oats). In Western Siberia (Tyumen, Omsk, and Novosibirsk oblasts) and Eastern Siberia (Krasnoyarsk region and Irkutsk oblast), the agronomic potential of spring crops (wheat, barley, and oats) is only utilized by 35-45% in comparison with their European analogues. In the Far East with its monsoon climate and soil conditions (meadow podbels, brown forest soils), the crops characteristic of the European forest-steppe (soybean, rice, sugar beet) and the Trans-Ural forest-steppe (spring wheat) are cultivated. Their biological potential is utilized by only 50-60% in comparison with the European analogues. The materials of this study give us information on the degree of correspondence between the soilagroclimatic potential of the territory and the biological potential of cultivated crops. This is important in the context of improving the natural-agricultural zoning of Russia

Chemical control of vegetation on urban sites: agronomic and ecotoxicological aspects

International Nuclear Information System (INIS)

Zanin, G.; Otto, S.

1996-01-01

The problem of the chemical control of spontaneous vegetation on urban sites is tackled. A method is presented to identify the best herbicides under both the agronomic and ecotoxicological aspects. Selection of the herbicides from the agronomic point of view is on the basis of the qualitative characteristics of the vegetation (life-form types periodicity types botanical composition), surveyed at 5 different times on the year while selection from the environmental viewpoint is based on an evaluation integrated with a series of ecotoxicological indices. The best solution was tested in a pilot area and the contamination of the water compartment evaluated both on entering and leaving the water treatment works

Considerations on the research and dissemination of agricultural knowledge by the Facultad de Agronomía

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Gustavo A Ligarreto M

2013-08-01

Full Text Available In order to mark the 50-year-history of the Facultad de Agronomía of the Universidad Nacional de Colombia, this article reviews the beginning of agronomy in Colombia, the creation of the Facultad de Agronomía, the development of the Escuela de Posgrados, and the launching of the journal Agronomia Colombiana; and analyzes the prioritization of research as a function of undergraduate thesis and theses from 1970 to 2012 and of the articles published in Agronomia Colombiana for 30 years. The fruits of its labor show that the Facultad strengthened the discipline of Crop protection in its first two decades with important advances in crops of flowers and cacao and went on to strengthen the fields of Crop physiology, Plant breeding, Soil and water, Economy and rural development, resulting in diversification to fruits, vegetables, the potato, flower species and perennial crops, showing how the Facultad's mission of teaching, research and continuing education has contributed to the development of the agricultural sector in Colombia

Field performance of transgenic citrus trees: assessment of the long-term expression of uidA and nptII transgenes and its impact on relevant agronomic and phenotypic characteristics.

Science.gov (United States)

Pons, Elsa; Peris, Josep E; Peña, Leandro

2012-07-15

The future of genetic transformation as a tool for the improvement of fruit trees depends on the development of proper systems for the assessment of unintended effects in field-grown GM lines. In this study, we used eight transgenic lines of two different citrus types (sweet orange and citrange) transformed with the marker genes β-glucuronidase (uidA) and neomycin phosphotransferase II (nptII) as model systems to study for the first time in citrus the long-term stability of transgene expression and whether transgene-derived pleiotropic effects occur with regard to the morphology, development and fruit quality of orchard-grown GM citrus trees. The stability of the integration and expression of the transgenes was confirmed in 7-year-old, orchard-grown transgenic lines by Southern blot analysis and enzymatic assays (GUS and ELISA NPTII), respectively. Little seasonal variation was detected in the expression levels between plants of the same transgenic line in different organs and over the 3 years of analysis, confirming the absence of rearrangements and/or silencing of the transgenes after transferring the plants to field conditions. Comparisons between the GM citrus lines with their non-GM counterparts across the study years showed that the expression of these transgenes did not cause alterations of the main phenotypic and agronomic plant and fruit characteristics. However, when comparisons were performed between diploid and tetraploid transgenic citrange trees and/or between juvenile and mature transgenic sweet orange trees, significant and consistent differences were detected, indicating that factors other than their transgenic nature induced a much higher phenotypic variability. Our results indicate that transgene expression in GM citrus remains stable during long-term agricultural cultivation, without causing unexpected effects on crop characteristics. This study also shows that the transgenic citrus trees expressing the selectable marker genes that are most

Does epigenetic polymorphism contribute to phenotypic variances in Jatropha curcas L.?

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Bui Ha TN

2010-11-01

Full Text Available Abstract Background There is a growing interest in Jatropha curcas L. (jatropha as a biodiesel feedstock plant. Variations in its morphology and seed productivity have been well documented. However, there is the lack of systematic comparative evaluation of distinct collections under same climate and agronomic practices. With the several reports on low genetic diversity in jatropha collections, there is uncertainty on genetic contribution to jatropha morphology. Result In this study, five populations of jatropha plants collected from China (CN, Indonesia (MD, Suriname (SU, Tanzania (AF and India (TN were planted in one farm under the same agronomic practices. Their agronomic traits (branching pattern, height, diameter of canopy, time to first flowering, dormancy, accumulated seed yield and oil content were observed and tracked for two years. Significant variations were found for all the agronomic traits studied. Genetic diversity and epigenetic diversity were evaluated using florescence Amplified Fragment Length Polymorphism (fAFLP and methylation sensitive florescence AFLP (MfAFLP methods. Very low level of genetic diversity was detected (polymorphic band Conclusion Our study confirmed climate and practice independent differences in agronomic performance among jatropha collections. Such agronomic trait variations, however, were matched by very low genetic diversity and medium level but significant epigenetic diversity. Significant difference in inner cytosine and double cytosine methylation at CCGG sites was also found among populations. Most epigenetic differential markers can be inherited as epialleles following Mendelian segregation. These results suggest possible involvement of epigenetics in jatropha development.

Introgression of physiological traits for a comprehensive improvement of drought adaptation in crop plants

Science.gov (United States)

Sreeman, Sheshshayee M.; Vijayaraghavareddy, Preethi; Sreevathsa, Rohini; Rajendrareddy, Sowmya; Arakesh, Smitharani; Bharti, Pooja; Dharmappa, Prathibha; Soolanayakanahally, Raju

2018-04-01

Burgeoning population growth, industrial demand and the predicted global climate change resulting in erratic monsoon rains are expected to severely limit fresh water availability for agriculture both in irrigated and rainfed ecosystems. In order to remain food and nutrient secure, agriculture research needs to focus on devising strategies to save water in irrigated conditions and to develop superior cultivars with improved water productivity to sustain yield under rainfed conditions. Recent opinions accruing in the scientific literature strongly favour the adoption of a “trait based” approach for increasing water productivity especially the traits associated with maintenance of positive tissue turgor and maintenance of increased carbon assimilation as the most relevant traits to improve crop growth rates under water limiting conditions and to enhance water productivity. The advent of several water saving agronomic practices notwithstanding, a genetic enhancement strategy of introgressing distinct physiological, morphological and cellular mechanisms on to a single elite genetic background is essential for achieving a comprehensive improvement in drought adaptation in crop plants. The significant progress made in genomics, though would provide the necessary impetus, a clear understanding of the “traits” to be introgressed is the most essential need of the hour. Water uptake by a better root architecture, water conservation by preventing unproductive transpiration is crucial for maintaining positive tissue water relations. Improved carbon assimilation associated with carboxylation capacity and mesophyll conductance is equally important in sustaining crop growth rates under water limited conditions. Besides these major traits, we summarized the available information in literature on classifying various drought adaptive traits. We provide evidences that water-use efficiency when introgressed with moderately higher transpiration, would significantly enhance

TaER Expression Is Associated with Transpiration Efficiency Traits and Yield in Bread Wheat.

Science.gov (United States)

Zheng, Jiacheng; Yang, Zhiyuan; Madgwick, Pippa J; Carmo-Silva, Elizabete; Parry, Martin A J; Hu, Yin-Gang

2015-01-01

ERECTA encodes a receptor-like kinase and is proposed as a candidate for determining transpiration efficiency of plants. Two genes homologous to ERECTA in Arabidopsis were identified on chromosomes 6 (TaER2) and 7 (TaER1) of bread wheat (Triticum aestivum L.), with copies of each gene on the A, B and D genomes of wheat. Similar expression patterns were observed for TaER1 and TaER2 with relatively higher expression of TaER1 in flag leaves of wheat at heading (Z55) and grain-filling (Z73) stages. Significant variations were found in the expression levels of both TaER1 and TaER2 in the flag leaves at both growth stages among 48 diverse bread wheat varieties. Based on the expression of TaER1 and TaER2, the 48 wheat varieties could be classified into three groups having high (5 varieties), medium (27 varieties) and low (16 varieties) levels of TaER expression. Significant differences were also observed between the three groups varying for TaER expression for several transpiration efficiency (TE)- related traits, including stomatal density (SD), transpiration rate, photosynthetic rate (A), instant water use efficiency (WUEi) and carbon isotope discrimination (CID), and yield traits of biomass production plant-1 (BYPP) and grain yield plant-1 (GYPP). Correlation analysis revealed that the expression of TaER1 and TaER2 at the two growth stages was significantly and negatively associated with SD (Ptranspiration rate (Ptranspiration efficiency -related traits and yield in bread wheat, implying a function for TaER in regulating leaf development of bread wheat and contributing to expression of these traits. Moreover, the results indicate that TaER could be exploitable for manipulating important agronomical traits in wheat improvement.

Characterization of indigenous gossypium arboreum L. genotypes for various fiber quality traits

International Nuclear Information System (INIS)

Iqbal, M. A.; Abbas, A.; Zafar, Y.

2015-01-01

Diploid cotton (Gossypium arboreum L.) being an Old World cultivated cotton species, evolved in Indo-Pak subcontinent, has been known for conferring resistance to biotic and abiotic stresses. To the extent of our knowledge, there is no comprehensive report available on the characterization of G. arboreum germplasm. Hence, the present study was conducted to characterize 26 G. arboreum genotypes by deploying univariate and multivariate analysis in 2010 at NIBGE, Faisalabad. All these genotypes were characterized for boll weight, GOT percentage, micronaire value, staple length, fiber bundle strength and uniformity index. Genotypic variation was significant (p<0.01) for all the analyzed traits except boll weight. Maximum boll weight (2.47g) was observed for genotype 23718. GOT ranged from 18.75% (Haroonabad) to 36.94 percentage (DC-116).The finest fiber was obtained from synthetic (4.37 micro g/inch) and this genotype also exhibited the higher values for staple length (23.81 mm) and fiber bundle strength (27.37 g/tex). Range for uniformity index was observed from 76.19 percentage (Garohill) to 77.98 percentage (212). Principal component analysis (PCA) exhibited that first five components accounted for >63 percentage of the total variability. Cluster analysis identified four groups based on their agronomic properties. Significant relationships among different traits can be useful to select best genotypes having good fiber quality traits. These genotypes may prove a valuable resource to fuel the breeding efforts for not only broadening the genetic base of the newly developed material but can also add synergy to various cotton genomic projects. (author)

Discovery of quantitative trait loci for crossability from a synthetic wheat genotype

Institute of Scientific and Technical Information of China (English)

Li Zhang; Jin Wang; Ronghua Zhou; Jizeng Jia

2011-01-01

Crossability between wheat and rye is an important trait for wheat improvement.No quantitative trait loci (QTLs) were detected from wheat ancestors previously.The objectives of this study were to dissect the QTLs for crossability using 111 introgression lines (ILs) derived from synthetic hexaploid wheat.A total of 1275 SSR markers were screened for polymorphism between the two parents,and 552 markers of them displayed polymorphism,of which 64 were selected for genotyping the 111 BC5F6 ILs.Field trials were performed in a Latinized α-lattice design in Luoyang and Jiaozuo of Henan Province of China in 2007-2008 and 2008-2009 cropping seasons.One-way ANOVA and interval mapping (IM) analysis were used to detect QTL for crossability between wheat and rye.A total of 13 putative QTLs were detected.Five of them,QCa.caas.1A,QCa.caas.2D,QCa.caas.4B,QCa.caas.5B and QCa.caas.6A,were detected in both trials and three of them,QCa.caas.2D,QCa.caas.4B and QCa.caas.6A,were novel.The positive effect allele of the four QTLs came from the donor parent Am3 except QCa.caas.6A that came from the recurrent parent Laizhou953.ILs with both higher positive effect alleles and favorable agronomic traits developed in present study are elite germplasm for wide crossing in wheat.Results from the current study suggest that wheat ancestors can be rich in new sources of crossability genes.

Caracterização agronômica e pungência em pimenta de cheiro Agronomic traits and pungency of chilli pepper

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Carolina I Domenico

2012-09-01

údo de capsaicina, resultado inédito para uma pimenta de cheiro brasileira.Nine accessions of the Active Capsicum chinense Germplasm Bank of Instituto Agronômico were characterized and evaluated in climate and soil conditions of Campinas, São Paulo state, Brazil. The experiment was carried out from January to October 2010. The experimental design was randomized blocks, with nine treatments, five replications and eight plants per plot. Evaluated traits were plant height, plant growth habit, first flower anthesis, fruit yield, fresh fruit weight, fruit height and width, capsaicin content, ripe fruit color, fruit shape and fruit surface. For fruit and plant characterization were considered the four central plants of each plot; for capsaicin content evaluation were used three samples of five fruits of each accession. Capsaicin content was measured by ultra-high pressure liquid chromatography. Plant height ranged from 1.13 to 0.85 m. The most accessions presented compact growth habit of plants. Accessions IAC 1644, IAC 1645 and IAC 1643 were the earliest for anthesis of first flower. IAC 1646 showed high fruit yield, fruit width and fresh weight, and IAC 1641 showed the longest fruits. IAC 1552 ('Murupi' stood out with highest capsaicin content, outperforming IAC 1646 ('Scotch Bonnet' and IAC 1644 ('Fidalga', habanero types. Fruits presented yellow, orange, salmon and red colors. The fruits presented the elongated, round, triangular, campanulated and blocked shape. The fruit surface was characterized as smooth, semi-rough and rough. In the climate and soil conditions where the research was developed and, regarding the accessions evaluated, there was high variability in chili peppers for agronomic traits and capsaicin content. IAC 1552 stood out with highest capsaicin content, first result for a Brazilian chilli pepper.

Study of Genetic Diversity of grain yield-associated traits in Iranian and Exotic Safflower (Carthamus tinctorius Germplasm

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M. M. Majidi

2015-09-01

Full Text Available Safflower (Carthamus tinctorius L. is cultivated in a wide range of geographical conditions in the world from Africa to Europe, India and China. Previous studies have shown that diversity in indigenous Iranian germplasm is limited for some traits therefore germplasm collections from other origins need to be considered. An experiment was conducted to evaluate agronomic and morphological traits of 100 Iranian and exotic safflower genotypes during 2011- 2012 at the Research Farm of Isfahan University of Technology, Isfahan, Iran, using a simple lattice design of 10 × 10. The results of analysis of variance showed that the differences among genotypes were highly significant (p < 0.01 for days to flowering, seed yield, plant height, number of heads per plant, number of seeds per head, 1000-seed weight, oil content and harvest index, indicating high variability in the studied germplasm. The highest and lowest heritabilities were observed for 1000-seed weight and seed yield, respectively, indicating that indirect improving for seed yield would be more beneficial. Genetic and phenotypic correlation coefficients showed that number of heads per plant, number of seeds per head and harvest index had significantly positive correlations with seed yield. The results of stepwise regression and path analysis showed that number of heads per plant, number of seeds per head and 1000-seed weight are the most important components of seed yield, among which, number of heads per plant had the greatest direct positive effect on seed yield. These traits could be used as criteria for indirect selection in safflower breeding programs. Factor analysis recognized three factors which explained 72.56 percent of total variations. These factors were defined as phenological, physiological source and efficiency factors. Cluster analysis based on the agronomic and morphological traits grouped the genotypes into three clusters. Iranian accessions were clearly discriminated from

Planting time and mulching effect on onion development and seed ...

African Journals Online (AJOL)

A field experiment was conducted to evaluate effects of planting time and mulches on bulb growth and seed production of onion (Allium cepa L.) cv. Taherpuri. Planting time and mulches had significant influence on almost all parameters studied. Onion planted on 21 November had better agronomic traits contributing ...

Molecular, Genetic and Agronomic Approaches to Utilizing Pulses as Cover Crops and Green Manure into Cropping Systems.

Science.gov (United States)

Tani, Eleni; Abraham, Eleni; Chachalis, Demosthenis; Travlos, Ilias

2017-06-05

Cover crops constitute one of the most promising agronomic practices towards a more sustainable agriculture. Their beneficial effects on main crops, soil and environment are many and various, while risks and disadvantages may also appear. Several legumes show a high potential but further research is required in order to suggest the optimal legume cover crops for each case in terms of their productivity and ability to suppress weeds. The additional cost associated with cover crops should also be addressed and in this context the use of grain legumes such as cowpea, faba bean and pea could be of high interest. Some of the aspects of these grain legumes as far as their use as cover crops, their genetic diversity and their breeding using conventional and molecular approaches are discussed in the present review. The specific species seem to have a high potential for use as cover crops, especially if their noticeable genetic diversity is exploited and their breeding focuses on several desirable traits.

Molecular, Genetic and Agronomic Approaches to Utilizing Pulses as Cover Crops and Green Manure into Cropping Systems

Science.gov (United States)

Tani, Eleni; Abraham, Eleni; Chachalis, Demosthenis; Travlos, Ilias

2017-01-01

Cover crops constitute one of the most promising agronomic practices towards a more sustainable agriculture. Their beneficial effects on main crops, soil and environment are many and various, while risks and disadvantages may also appear. Several legumes show a high potential but further research is required in order to suggest the optimal legume cover crops for each case in terms of their productivity and ability to suppress weeds. The additional cost associated with cover crops should also be addressed and in this context the use of grain legumes such as cowpea, faba bean and pea could be of high interest. Some of the aspects of these grain legumes as far as their use as cover crops, their genetic diversity and their breeding using conventional and molecular approaches are discussed in the present review. The specific species seem to have a high potential for use as cover crops, especially if their noticeable genetic diversity is exploited and their breeding focuses on several desirable traits. PMID:28587254

Maize YABBY genes drooping leaf1 and drooping leaf2 affect agronomic traits by regulating leaf architecture

Science.gov (United States)

Leaf architectural traits, such as length, width and angle, directly influence canopy structure and light penetration, photosynthate production and overall yield. We discovered and characterized a maize (Zea mays) mutant with aberrant leaf architecture we named drooping leaf1 (drl1), as leaf blades ...

QTLs for agronomic traits in the Mediterranean environment identified in recombinant inbred lines of the cross 'Arta' × ¤H. spontaneum¤ 41-1

DEFF Research Database (Denmark)

Baum, M.; Grando, S.; Backes, G.

2003-01-01

A genetic linkage map has been developed for recombinant inbred lines (RILs) of the cross 'Arta' x Hordeum spontaneum 41-1. One hundred and ninety four RILs, randomly chosen from a population of 494 RILs, were mapped with 189 markers including one morphological trait (btr = brittle rachis locus...

Combining ability for maize grain yield and other agronomic ...

African Journals Online (AJOL)

Field experiments were conducted at the University of Ilorin Teaching and Research Farm in 2005 and 2006 cropping seasons with the objective to evaluate the combining ability for maize grain yield and other agronomic characters in 10 open pollinated maize varieties, which have been selected for high yield and stress ...

Systems Biology for Smart Crops and Agricultural Innovation: Filling the Gaps between Genotype and Phenotype for Complex Traits Linked with Robust Agricultural Productivity and Sustainability

Science.gov (United States)

Pathak, Rajesh Kumar; Gupta, Sanjay Mohan; Gaur, Vikram Singh; Pandey, Dinesh

2015-01-01

Abstract In recent years, rapid developments in several omics platforms and next generation sequencing technology have generated a huge amount of biological data about plants. Systems biology aims to develop and use well-organized and efficient algorithms, data structure, visualization, and communication tools for the integration of these biological data with the goal of computational modeling and simulation. It studies crop plant systems by systematically perturbing them, checking the gene, protein, and informational pathway responses; integrating these data; and finally, formulating mathematical models that describe the structure of system and its response to individual perturbations. Consequently, systems biology approaches, such as integrative and predictive ones, hold immense potential in understanding of molecular mechanism of agriculturally important complex traits linked to agricultural productivity. This has led to identification of some key genes and proteins involved in networks of pathways involved in input use efficiency, biotic and abiotic stress resistance, photosynthesis efficiency, root, stem and leaf architecture, and nutrient mobilization. The developments in the above fields have made it possible to design smart crops with superior agronomic traits through genetic manipulation of key candidate genes. PMID:26484978

Psychosocial Development and the Big Five Personality Traits among Chinese University Students

Science.gov (United States)

Zhang, Li-fang

2013-01-01

This study explores how psychosocial development and personality traits are related. In particular, the study investigates the predictive power of the successful resolution of the Eriksonian psychosocial crises for the Big Five personality traits beyond age and gender. Four hundred university students in mainland China responded to the Measures of…

Bio-effectors from waste materials as growth promoters for tomato plants, an agronomic and metabolomic study

Science.gov (United States)

Abou Chehade, Lara; Chami, Ziad Al; De Pascali, Sandra; Cavoski, Ivana; Fanizzi, Francesco Paolo

2015-04-01

In organic farming, where nutrient management is constrained and sustainability is claimed, bio-effectors pave their way. Considering selected bio-effectors, this study integrates metabolomics to agronomy in depicting induced relevant phenomena. Extracts of three agro-industrial wastes (Lemon processing residues, Fennel processing residues and Brewer's spent grain) are being investigated as sources of bio-effectors for the third trial consequently. Corresponding individual and mixture aqueous extracts are assessed for their synergistic and/or single agronomic and qualitative performances on soil-grown tomato, compared to both a control and humic acid treatments. A metabolomic profiling of tomato fruits via the Proton Nuclear Magnetic Resonance (NMR) spectroscopy, as holistic indicator of fruit quality and extract-induced responses, complements crop productivity and organoleptic/nutritional qualitative analyses. Results are expected to show mainly an enhancement of the fruit qualitative traits, and to confirm partly the previous results of better crop productivity and metabolism enhancement. Waste-derived bio-effectors could be, accordingly, demonstrated as potential candidates of plant-enhancing substances. Keywords: bio-effectors, organic farming, agro-industrial wastes, nuclear magnetic resonance (NMR), tomato.

Grain yield and agronomic characteristics of Romanian bread wheat ...

African Journals Online (AJOL)

In this study, fourteen bread wheat varieties, twelve of which were introduced into Turkey from Romania, were evaluated for grain yield and seven agronomic properties in Biga, Çanakkale in northwest part of Turkey in 2005 - 2006 and 2006 - 2007 growing seasons. The objectives of the research, carried out in a completely ...

Agronomic performance of five banana cultivars under protected cultivation

Science.gov (United States)

Banana has been grown both in open-field and protected cultivation in Turkey. So far protected cultivation is very popular due to the high yield and quality. The objective of the study was to evaluate agronomic performance of five new banana cultivars under plastic greenhouse. ‘MA 13’, ‘Williams’, ‘...

Agronomic behavior of gladiolus in organic substrates with wastewater reuse

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Ítalo Dourado Teixeira

2015-12-01

Full Text Available This study aimed to assess the technical feasibility of effluent reuse and recycling of organic substrates in the production of gladiolus. We adopted a completely randomized design in a split-plot, and the plots three qualities water (river water with Hoagland’s solution; treated effluent in stabilization pond; treated effluent in stabilization pond and disinfected and the subplots organic substrates (pine bark, coir, bagasse, repeated five times. Were characterized physico-chemical water and each substrate, the beginning and end of two growing seasons. The variables evaluated were: number of tillers, plant height, total production; flower stem length, number of flowers, time to first harvest, total cycle time, fresh and dry mass of the area. The reuse of effluent resulted in agronomic performance equal or superior to that obtained by the use of nutrient solution and the substrate base bagasse promoted agronomic performance inferior to the other substrates evaluated.

Genetic variability of hull-less barley accessions based on molecular and quantitative data

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Ricardo Meneses Sayd

2015-02-01

Full Text Available The objective of this work was to characterize and quantify the genetic, molecular, and agronomic variability of hull-less barley genotypes, for the selection of parents and identification of genotypes adapted to the irrigated production system in the Brazilian Cerrado. Eighteen hull-less barley accessions were evaluated, and three covered barley accessions served as reference. The characterization was based on 157 RAPD molecular markers and ten agronomic traits. Genetic distance matrices were obtained based on molecular markers and quantitative traits. Graphic grouping and dispersion analyses were performed. Genetic, molecular, and agronomic variability was high among genotypes. Ethiopian accessions were genetically more similar, and the Brazilian ones were genetically more distant. For agronomic traits, two more consistent groupings were obtained, one with the most two-rowed materials, and the other with six-rowed materials. The more diverging materials were the two-rowed CI 13453, CN Cerrado 5, CN Cerrado 1, and CN Cerrado 2. The PI 356466, CN Cerrado 1, PI 370799, and CI 13453 genotypes show agronomic traits of interest and, as genetically different genotypes, they are indicated for crossing, in breeding programs.

Understanding Arsenic Dynamics in Agronomic Systems to ...

Science.gov (United States)

This review is on arsenic in agronomic systems, and covers processes that influence the entry of arsenic into the human food supply. The scope is from sources of arsenic (natural and anthropogenic) in soils, biogeochemical and rhizosphere processes that control arsenic speciation and availability, through to mechanisms of uptake by crop plants and potential mitigation strategies. This review makes a case for taking steps to prevent or limit crop uptake of arsenic, wherever possible, and to work toward a long-term solution to the presence of arsenic in agronomic systems. The past two decades have seen important advances in our understanding of how biogeochemical and physiological processes influence human exposure to soil arsenic, and thus must now prompt an informed reconsideration and unification of regulations to protect the quality of agricultural and residential soils. Consumption of staple foods such as rice, beverages such as apple juice, or vegetables grown in historically arsenic-contaminated soils is now recognized as a tangible route of arsenic exposure that, in many cases, is more significant than exposure from drinking water. Understanding the sources of arsenic to crop plants and the factors that influence them is key to reducing exposure now and preventing exposure in future. In addition to the abundant natural sources of arsenic, there are a large number of industrial and agricultural sources of arsenic to the soil; from mining wastes, coal fly

Modeling of genetic gain for single traits from marker-assisted seedling selection in clonally propagated crops

Science.gov (United States)

Ru, Sushan; Hardner, Craig; Carter, Patrick A; Evans, Kate; Main, Dorrie; Peace, Cameron

2016-01-01

Seedling selection identifies superior seedlings as candidate cultivars based on predicted genetic potential for traits of interest. Traditionally, genetic potential is determined by phenotypic evaluation. With the availability of DNA tests for some agronomically important traits, breeders have the opportunity to include DNA information in their seedling selection operations—known as marker-assisted seedling selection. A major challenge in deploying marker-assisted seedling selection in clonally propagated crops is a lack of knowledge in genetic gain achievable from alternative strategies. Existing models based on additive effects considering seed-propagated crops are not directly relevant for seedling selection of clonally propagated crops, as clonal propagation captures all genetic effects, not just additive. This study modeled genetic gain from traditional and various marker-based seedling selection strategies on a single trait basis through analytical derivation and stochastic simulation, based on a generalized seedling selection scheme of clonally propagated crops. Various trait-test scenarios with a range of broad-sense heritability and proportion of genotypic variance explained by DNA markers were simulated for two populations with different segregation patterns. Both derived and simulated results indicated that marker-based strategies tended to achieve higher genetic gain than phenotypic seedling selection for a trait where the proportion of genotypic variance explained by marker information was greater than the broad-sense heritability. Results from this study provides guidance in optimizing genetic gain from seedling selection for single traits where DNA tests providing marker information are available. PMID:27148453

Introgression of Physiological Traits for a Comprehensive Improvement of Drought Adaptation in Crop Plants

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Sheshshayee M. Sreeman

2018-04-01

Full Text Available Burgeoning population growth, industrial demand, and the predicted global climate change resulting in erratic monsoon rains are expected to severely limit fresh water availability for agriculture both in irrigated and rainfed ecosystems. In order to remain food and nutrient secure, agriculture research needs to focus on devising strategies to save water in irrigated conditions and to develop superior cultivars with improved water productivity to sustain yield under rainfed conditions. Recent opinions accruing in the scientific literature strongly favor the adoption of a “trait based” crop improvement approach for increasing water productivity. Traits associated with maintenance of positive tissue turgor and maintenance of increased carbon assimilation are regarded as most relevant to improve crop growth rates under water limiting conditions and to enhance water productivity. The advent of several water saving agronomic practices notwithstanding, a genetic enhancement strategy of introgressing distinct physiological, morphological, and cellular mechanisms on to a single elite genetic background is essential for achieving a comprehensive improvement in drought adaptation in crop plants. The significant progress made in genomics, though would provide the necessary impetus, a clear understanding of the “traits” to be introgressed is the most essential need of the hour. Water uptake by a better root architecture, water conservation by preventing unproductive transpiration are crucial for maintaining positive tissue water relations. Improved carbon assimilation associated with carboxylation capacity and mesophyll conductance is important in sustaining crop growth rates under water limited conditions. Besides these major traits, we summarize the available information in literature on classifying various drought adaptive traits. We provide evidences that Water-Use Efficiency when introgressed with moderately higher transpiration, would

Molecular diversification and preliminary evaluations of some ...

African Journals Online (AJOL)

Administrator

2011-05-23

May 23, 2011 ... Satsuma (Citrus unshiu Marc.) has been cultivated for a long time in Turkey, and therefore variations for agronomical traits are likely among cultivated satsumas due to bud mutations. The objectives of this study were to determine variations for some selected agronomical traits and genetic markers among ...

Agronomic potential of mineral concentrate from processed manure as fertiliser

NARCIS (Netherlands)

Velthof, G.L.; Hoeksma, P.; Schröder, J.J.; Middelkoop, van J.C.; Geel, van W.C.A.; Ehlert, P.A.I.; Holshof, G.; Klop, G.; Lesschen, J.P.

2012-01-01

Processing of manure intends to increase the use efficiency of nutrients. A concentrated solution of nitrogen (N) and potassium (K) (‘mineral concentrate’) is one of the possible products resulting from manure processing. A study is carried out in the Netherlands to determine the agronomic and

Effect of Some Agronomic Practices to Increase Maize Yield in Ghana

African Journals Online (AJOL)

Effect of Some Agronomic Practices to Increase Maize Yield in Ghana. ... Journal of Science and Technology (Ghana) ... With the increasing population and consumption of maize in the country, research must be directed to solve this problem ...

The 'PUCE CAFE' Project: the first 15K coffee microarray, a new tool for discovering candidate genes correlated to agronomic and quality traits.

Science.gov (United States)

Privat, Isabelle; Bardil, Amélie; Gomez, Aureliano Bombarely; Severac, Dany; Dantec, Christelle; Fuentes, Ivanna; Mueller, Lukas; Joët, Thierry; Pot, David; Foucrier, Séverine; Dussert, Stéphane; Leroy, Thierry; Journot, Laurent; de Kochko, Alexandre; Campa, Claudine; Combes, Marie-Christine; Lashermes, Philippe; Bertrand, Benoit

2011-01-05

Understanding the genetic elements that contribute to key aspects of coffee biology will have an impact on future agronomical improvements for this economically important tree. During the past years, EST collections were generated in Coffee, opening the possibility to create new tools for functional genomics. The "PUCE CAFE" Project, organized by the scientific consortium NESTLE/IRD/CIRAD, has developed an oligo-based microarray using 15,721 unigenes derived from published coffee EST sequences mostly obtained from different stages of fruit development and leaves in Coffea Canephora (Robusta). Hybridizations for two independent experiments served to compare global gene expression profiles in three types of tissue matter (mature beans, leaves and flowers) in C. canephora as well as in the leaves of three different coffee species (C. canephora, C. eugenoides and C. arabica). Microarray construction, statistical analyses and validation by Q-PCR analysis are presented in this study. We have generated the first 15 K coffee array during this PUCE CAFE project, granted by Génoplante (the French consortium for plant genomics). This new tool will help study functional genomics in a wide range of experiments on various plant tissues, such as analyzing bean maturation or resistance to pathogens or drought. Furthermore, the use of this array has proven to be valid in different coffee species (diploid or tetraploid), drastically enlarging its impact for high-throughput gene expression in the community of coffee research.

The 'PUCE CAFE' Project: the First 15K Coffee Microarray, a New Tool for Discovering Candidate Genes correlated to Agronomic and Quality Traits

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Leroy Thierry

2011-01-01

Full Text Available Abstract Background Understanding the genetic elements that contribute to key aspects of coffee biology will have an impact on future agronomical improvements for this economically important tree. During the past years, EST collections were generated in Coffee, opening the possibility to create new tools for functional genomics. Results The "PUCE CAFE" Project, organized by the scientific consortium NESTLE/IRD/CIRAD, has developed an oligo-based microarray using 15,721 unigenes derived from published coffee EST sequences mostly obtained from different stages of fruit development and leaves in Coffea Canephora (Robusta. Hybridizations for two independent experiments served to compare global gene expression profiles in three types of tissue matter (mature beans, leaves and flowers in C. canephora as well as in the leaves of three different coffee species (C. canephora, C. eugenoides and C. arabica. Microarray construction, statistical analyses and validation by Q-PCR analysis are presented in this study. Conclusion We have generated the first 15 K coffee array during this PUCE CAFE project, granted by Génoplante (the French consortium for plant genomics. This new tool will help study functional genomics in a wide range of experiments on various plant tissues, such as analyzing bean maturation or resistance to pathogens or drought. Furthermore, the use of this array has proven to be valid in different coffee species (diploid or tetraploid, drastically enlarging its impact for high-throughput gene expression in the community of coffee research.

A national survey into desirable personality traits in anaesthesia trainees in a developing country.

Science.gov (United States)

Khan, Fauzia Anis; Minai, Fauzia

2010-03-01

To explore personality traits considered to be important in selection of trainees by consultant anaesthetists in a developing country. A questionnaire listing 28 traits was sent to 125 consultant anaesthetists. The raters were asked to mark each trait on a scale of 1 to 10, with one being least desirable and 10 as most desirable. Listing of five most desirable and one least desirable trait was also required. The response rate was 79%. The most desirable trait was identified as reliability by 40%, followed by honesty 17%, functionality under stress 9%, punctuality 7%, and discipline 4%. The least desirable trait was considered as resourcefulness (21%), sense of humour (20%), unassuming mannerism (15%), high self esteem (11%), inquisitive (5%) and expedious (5%). Some traits have been identified as more desirable than others for trainees in our country. We plan to assess these in structured behavioural interviews in our residency programme.

MORPHOLOGICAL AND AGRONOMICAL CHARACTERISTICS OF SOME WILD AND CULTIVATED ISATIS SPECIES

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Süleyman KIZIL

2007-04-01

Full Text Available The study evaluated Isatis tinctoria, I. constricta, I. glauca, I. cochlearis, I. aucheri and I. demiriziana during 2002-03 and 2003-04 growing seasons for different agronomic characteristics affecting the percentage of dye in them. The results showed wide variations in the agronomic characteristics of Isatis constricta, Isatis cochlearis, Isatis aucheri, Isatis demiriziana collected from wild; compared to culture Isatis tinctoria and Isatis glauca. I. tinctoria showed early emergence (36 day compared to other species, and I. glauca was determined as late fl owering (512 day species. Among Isatis species, I. glauca showed the maximum plant height (113.4 cm, stem diameter (10.84 mm seed yield per plant (103.0 g . Whereas, I. tinctoria produced the largest number of branches per plant (16.8 plant-1 and the maximum number of seeds (17918 per plant.

Effect of Irrigation Intervalsand Plantingdate on Agronomic Characteristics of Degen and Drfi (Securiger securidaca L. in Birjand Region

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h Tabiei

2014-07-01

Full Text Available Degen & Drfiis a plant that has medicinal and nutritional importance. Degen&Drfi and countless of plants in this genus had application for medicinal uses such as weight loss and diabetes control. Its seeds also contain protein and lipids as well as some starchy foods are consumed. In order to investigate the effect of irrigation regime and planting date on agronomic characteristics of Degen&Drfi a field experiment carried out in region of kahi, Birjand, south khorasan, Iran, 2010. The experiment was conducted in split plot design in a randomized complete block with four replications. Irrigation regime, including: six, twelve and eighteen days' intervals as main factors and planting Date at four levels (20, 25, 30 April, and5 May were devoted to sub-plots. Analysis of variance showed that irrigation regime for all treatment, had more significant influence on trait including plant height, number of pods per plant, seeds per pod, biomass, grain yield and harvest index, and had significant influence the yield of flowers per plant and weight seed. The highest amounts of each trait were gained from 12 days interval irrigation. The effect of planting date was significant all treatment for all traits except 1000-seed weight. Planting in 20 April had highest values of characteristics. Interaction between irrigation and planting date were significant for number of stems, flowers and pods per plant, biomass, harvest index and grain yield at 1% and plant height at 5% level. The highest seed yield was obtained from irrigation in 12 days interval and planting in the 20 April. Results showed that irrigation in 12 days interval and planting especially in late April are the best treatment forDegen&Drfi production.

Chemical and agronomic development of Kalanchoe brasiliensis Camb. and Kalanchoe pinnata Pers under light and temperature levels.

Science.gov (United States)

Cruz, Bruna P; Chedier, Luciana M; Fabri, Rodrigo L; Pimenta, Daniel S

2011-12-01

This study compares the development of Kalanchoe brasiliensis and Kalanchoe pinnata, which are medicinal species known as "saião" and "folha da fortuna" that are used interchangeably by the population for medicinal purposes. The experiment consisted of 20 plots/species planted in plastic bags with homogeneous substrate in a randomized design, which grown under light levels (25%, 50%, 70%, full sunlight) at environment temperature, and a treatment under a plastic with greater temperature range than the external environment. It was obtained for K. pinnata a greater plant height, total length of sprouts, stems, production and dry matter content of leaves than that obtained for K. brasiliensis, which achieved higher averages only for the length of lateral branches. The species showed increases in height, which varied in inverse proportion to the light, and it was observed the influence of temperature in K. pinnata. The production and dry matter content of leaves were proportional to the luminosity; the same occurred in the thickness of leaves for K. brasiliensis. In the swelling index and Brix degree, K. brasiliensis showed higher averages than K. pinnata. In relation to the total content of flavonoids it was not observed significant differences for both species. The analyzed parameters showed the main differences in the agronomic development of the two species.

Canonical correlations in elephant grass for energy purposes ...

African Journals Online (AJOL)

In the first cut, the following morpho-agronomic traits were evaluated: dry matter yield, percentage of dry matter, number of tillers, plant height, stem diameter, percentages of ash, cellulose, lignin, acid detergent fiber and crude protein and calorific value. In the third cut, in addition to the morpho-agronomic traits assessed in ...

Agronomic performance of insect-protected and herbicide-tolerant MON 89034 × TC1507 × NK603 × DAS-40278-9 corn is equivalent to that of conventional corn.

Science.gov (United States)

de Cerqueira, Denise T Rezende; Schafer, Ariane C; Fast, Brandon J; Herman, Rod A

2017-07-03

Agronomic characteristics of genetically modified (GM) MON 89034 × TC1507 × NK603 × DAS-40278-9 (PowerCore™ Enlist™), MON 89034 × TC1507 × NK603 (PowerCore™), and DAS-40278-9 (Enlist™) corn, a non-GM near-isogenic hybrid, and 2 commercial non-GM hybrids were assessed in a field study to determine if the agronomic performance of the GM corn hybrids is equivalent to that of non-transgenic hybrid corn. The MON 89034 × TC1507 × NK603 × DAS-40278-9 hybrid corn was developed through stacking of 4 individual transgenic events, MON 89034, TC1507, NK603, and DAS-40278-9 by traditional breeding and contains the cry1A.105 and cry2Ab2 (MON 89034), cry1F and pat (TC1507), cp4 epsps (NK603) and aad-1 (DAS-40278-9) transgenes. These transgenes encode the proteins Cry1A.105, Cry2Ab2, and Cry1F, which confer insect resistance, PAT, CP4 EPSPS, and AAD-1, which confer herbicide tolerance. The following agronomic characteristics were assessed in the study: initial and final stand count, seedling vigor, time to silk, time to pollen shed, pollen viability, plant height, ear height, stalk lodging, root lodging, days to maturity, stay green, disease incidence, insect damage, herbicide injury, and yield. The agronomic assessment was conducted in 2 regions of Brazil (Indianopolis-MG; Cravinhos-SP). The agronomic attributes for all GM entries were statistically indistinguishable from the non-GM near-isogenic hybrid. In addition, most of the agronomic assessments fell within the range of the commercial varieties included in the study. Taken together, MON 89034 × TC1507 × NK603 × DAS-40278, MON 89034 × TC1507 × NK603, and DAS-40278-9 were found to be agronomically equivalent to non-GM corn.

IMPROVING BIOMASS LOGISTICS COST WITHIN AGRONOMIC SUSTAINABILITY CONSTRAINTS AND BIOMASS QUALITY TARGETS

Energy Technology Data Exchange (ETDEWEB)

J. Richard Hess; Kevin L. Kenney; Christopher T. Wright; David J. Muth; William Smith

2012-10-01

Equipment manufacturers have made rapid improvements in biomass harvesting and handling equipment. These improvements have increased transportation and handling efficiencies due to higher biomass densities and reduced losses. Improvements in grinder efficiencies and capacity have reduced biomass grinding costs. Biomass collection efficiencies (the ratio of biomass collected to the amount available in the field) as high as 75% for crop residues and greater than 90% for perennial energy crops have also been demonstrated. However, as collection rates increase, the fraction of entrained soil in the biomass increases, and high biomass residue removal rates can violate agronomic sustainability limits. Advancements in quantifying multi-factor sustainability limits to increase removal rate as guided by sustainable residue removal plans, and mitigating soil contamination through targeted removal rates based on soil type and residue type/fraction is allowing the use of new high efficiency harvesting equipment and methods. As another consideration, single pass harvesting and other technologies that improve harvesting costs cause biomass storage moisture management challenges, which challenges are further perturbed by annual variability in biomass moisture content. Monitoring, sampling, simulation, and analysis provide basis for moisture, time, and quality relationships in storage, which has allowed the development of moisture tolerant storage systems and best management processes that combine moisture content and time to accommodate baled storage of wet material based upon “shelf-life.” The key to improving biomass supply logistics costs has been developing the associated agronomic sustainability and biomass quality technologies and processes that allow the implementation of equipment engineering solutions.

Molecular evolution of candidate genes for crop-related traits in sunflower (Helianthus annuus L.).

Science.gov (United States)

Mandel, Jennifer R; McAssey, Edward V; Nambeesan, Savithri; Garcia-Navarro, Elena; Burke, John M

2014-01-01

Evolutionary analyses aimed at detecting the molecular signature of selection during crop domestication and/or improvement can be used to identify genes or genomic regions of likely agronomic importance. Here, we describe the DNA sequence-based characterization of a pool of candidate genes for crop-related traits in sunflower. These genes, which were identified based on homology to genes of known effect in other study systems, were initially sequenced from a panel of improved lines. All genes that exhibited a paucity of sequence diversity, consistent with the possible effects of selection during the evolution of cultivated sunflower, were then sequenced from a panel of wild sunflower accessions an outgroup. These data enabled formal tests for the effects of selection in shaping sequence diversity at these loci. When selection was detected, we further sequenced these genes from a panel of primitive landraces, thereby allowing us to investigate the likely timing of selection (i.e., domestication vs. improvement). We ultimately identified seven genes that exhibited the signature of positive selection during either domestication or improvement. Genetic mapping of a subset of these genes revealed co-localization between candidates for genes involved in the determination of flowering time, seed germination, plant growth/development, and branching and QTL that were previously identified for these traits in cultivated × wild sunflower mapping populations.

Combining high-throughput phenotyping and genome-wide association studies to reveal natural genetic variation in rice

OpenAIRE

Yang, Wanneng; Guo, Zilong; Huang, Chenglong; Duan, Lingfeng; Chen, Guoxing; Jiang, Ni; Fang, Wei; Feng, Hui; Xie, Weibo; Lian, Xingming; Wang, Gongwei; Luo, Qingming; Zhang, Qifa; Liu, Qian; Xiong, Lizhong

2014-01-01

Even as the study of plant genomics rapidly develops through the use of high-throughput sequencing techniques, traditional plant phenotyping lags far behind. Here we develop a high-throughput rice phenotyping facility (HRPF) to monitor 13 traditional agronomic traits and 2 newly defined traits during the rice growth period. Using genome-wide association studies (GWAS) of the 15 traits, we identify 141 associated loci, 25 of which contain known genes such as the Green Revolution semi-dwarf gen...

Assessing the Basic Traits Associated with Psychopathy: Development and Validation of the Elemental Psychopathy Assessment

Science.gov (United States)

Lynam, Donald R.; Gaughan, Eric T.; Miller, Joshua D.; Miller, Drew J.; Mullins-Sweatt, Stephanie; Widiger, Thomas A.

2011-01-01

A new self-report assessment of the basic traits of psychopathy was developed with a general trait model of personality (five-factor model [FFM]) as a framework. Scales were written to assess maladaptive variants of the 18 FFM traits that are robustly related to psychopathy across a variety of perspectives including empirical correlations, expert…

Disentangling agronomic and economic yield gaps: An integrated framework and application

NARCIS (Netherlands)

Dijk, M. van; Morley, T.; Jongeneel, R.A.; Ittersum, M.K. van; Reidsma, P.; Ruben, R.

2017-01-01

Despite its frequent use in policy discussions on future agricultural production, both the concept of the yield gap and its determinants are understood differently by economists and agronomists. This study provides a micro-level framework that disentangles and integrates agronomic and economic

Within-Trait Heterogeneity in Age Group Differences in Personality Domains and Facets: Implications for the Development and Coherence of Personality Traits

Science.gov (United States)

Mõttus, René; Realo, Anu; Allik, Jüri; Esko, Tõnu; Metspalu, Andres; Johnson, Wendy

2015-01-01

The study investigated differences in the Five-Factor Model (FFM) domains and facets across adulthood. The main questions were whether personality scales reflected coherent units of trait development and thereby coherent personality traits more generally. These questions were addressed by testing if the components of the trait scales (items for facet scales and facets for domain scales) showed consistent age group differences. For this, measurement invariance (MI) framework was used. In a sample of 2,711 Estonians who had completed the NEO Personality Inventory 3 (NEO PI-3), more than half of the facet scales and one domain scale did not meet the criterion for weak MI (factor loading equality) across 12 age groups spanning ages from 18 to 91 years. Furthermore, none of the facet and domain scales met the criterion for strong MI (intercept equality), suggesting that items of the same facets and facets of the same domains varied in age group differences. When items were residualized for their respective facets, 46% of them had significant (p traits should show similar age group differences. Given this, the FFM domains and facets as embodied in the NEO PI-3 do not reflect aetiologically coherent traits. PMID:25751273

The effect of nitrogen and sulphur on the agronomical and water use ...

African Journals Online (AJOL)

The effect of nitrogen and sulphur on the agronomical and water use efficiencies of canola (Brassica napus L.) grown in selected localities of the Western Cape province, South Africa. Wonder Ngezimana, Gert A. Agenbag ...

Developing a stochastic parameterization to incorporate plant trait variability into ecohydrologic modeling

Science.gov (United States)

Liu, S.; Ng, G. H. C.

2017-12-01

The global plant database has revealed that plant traits can vary more within a plant functional type (PFT) than among different PFTs, indicating that the current paradigm in ecohydrogical models of specifying fixed parameters based solely on plant functional type (PFT) could potentially bias simulations. Although some recent modeling studies have attempted to incorporate this observed plant trait variability, many failed to consider uncertainties due to sparse global observation, or they omitted spatial and/or temporal variability in the traits. Here we present a stochastic parameterization for prognostic vegetation simulations that are stochastic in time and space in order to represent plant trait plasticity - the process by which trait differences arise. We have developed the new PFT parameterization within the Community Land Model 4.5 (CLM 4.5) and tested the method for a desert shrubland watershed in the Mojave Desert, where fixed parameterizations cannot represent acclimation to desert conditions. Spatiotemporally correlated plant trait parameters were first generated based on TRY statistics and were then used to implement ensemble runs for the study area. The new PFT parameterization was then further conditioned on field measurements of soil moisture and remotely sensed observations of leaf-area-index to constrain uncertainties in the sparse global database. Our preliminary results show that incorporating data-conditioned, variable PFT parameterizations strongly affects simulated soil moisture and water fluxes, compared with default simulations. The results also provide new insights about correlations among plant trait parameters and between traits and environmental conditions in the desert shrubland watershed. Our proposed stochastic PFT parameterization method for ecohydrological models has great potential in advancing our understanding of how terrestrial ecosystems are predicted to adapt to variable environmental conditions.

Physiological and agronomical responses of Syrah grapevine under protected cultivation

Directory of Open Access Journals (Sweden)

Claudia Rita de Souza

2015-01-01

Full Text Available The performance of Syrah grapevine under protected cultivation with different plastic films was evaluated during 2012 and 2013 seasons in South of Minas Gerais State. Agronomical and physiological measurements were done on eight years old grapevines, grafted onto ‘1103 Paulsen’ rootstock cultivated under uncovered conditions, covered with transparent and with diffuse plastic films. Both plastic covers induced the highest shoot growth rate and specific leaf area. The diffuse plastic induced greater differences on leaf area, pruning weight and leaf chlorophyll content as compared to uncovered vines. Grapevines under diffuse plastic also had the lowest rates of photosynthesis, stomatal conductance and transpiration. Leaf starch, glucose and fructose contents were not affected by treatment, but leaf sucrose was reduced by transparent plastic. The leaf and stem water potential were higher under diffuse plastic. In 2013, grapevines under diffuse plastic showed the highest yields mainly due to decreased rot incidence and increased cluster weight. Furthermore, berries under diffuse plastic showed the highest anthocyanins concentration. The use of diffuse plastic induces more agronomical benefits to produce Syrah grape under protected cultivation.

Identification of sequence-related amplified polymorphism markers linked to the red leaf trait in ornamental kale (Brassica oleracea L. var. acephala).

Science.gov (United States)

Wang, Y S; Liu, Z Y; Li, Y F; Zhang, Y; Yang, X F; Feng, H

2013-04-02

Artistic diversiform leaf color is an important agronomic trait that affects the market value of ornamental kale. In the present study, genetic analysis showed that a single-dominant gene, Re (red leaf), determines the red leaf trait in ornamental kale. An F2 population consisting of 500 individuals from the cross of a red leaf double-haploid line 'D05' with a white leaf double-haploid line 'D10' was analyzed for the red leaf trait. By combining bulked segregant analysis and sequence-related amplified polymorphism technology, we identified 3 markers linked to the Re/re locus. A genetic map of the Re locus was constructed using these sequence-related amplified polymorphism markers. Two of the markers, Me8Em4 and Me8Em17, were located on one side of Re/re at distances of 2.2 and 6.4 cM, whereas the other marker, Me9Em11, was located on the other side of Re/re at a distance of 3.7 cM. These markers could be helpful for the subsequent cloning of the red trait gene and marker-assisted selection in ornamental kale breeding programs.

Agronomic efficiency and physiologic efficiency determination of Azolla-N and Urea-N applied to lowland rice

International Nuclear Information System (INIS)

Sisworo, Elsje L.; Rasjid, Havid; Sisworo, Widjang H.; Wemay, Johannis; Djawanas, Amrin

1994-01-01

Data from three field experiments using 15 N labelled Azolla and urea as an N source have been used to determine the agronomical and physiological efficiency of the N-Azoll and N-Urea applied tolowland rice. In general physiological efficiency of N from N-sources applied was lower than the agronomical efficiency. It seems that the increase of N-rates would enhance the agronomical and physiological efficiency of N applied to lowland rice but on the other hand the efficiency of N derived from the applied N-source decreased. Azolla+inorganic N-fertilizer when applied to lowland rice could increase rice yield expresses in dry weight of grain and straw above the control plants. Applying Azolla+inorganic N-fertilizer in the farmer's field located in West Java and West Sumatera often showed higher yields compared to when applied with inorganic N-fertilizer alone although the latter has higher total N-rates. (author). 9 refs, 8 tabs, 5 figs

Genomic consequences of selection and genome-wide association mapping in soybean.

Science.gov (United States)

Wen, Zixiang; Boyse, John F; Song, Qijian; Cregan, Perry B; Wang, Dechun

2015-09-03

Crop improvement always involves selection of specific alleles at genes controlling traits of agronomic importance, likely resulting in detectable signatures of selection within the genome of modern soybean (Glycine max L. Merr.). The identification of these signatures of selection is meaningful from the perspective of evolutionary biology and for uncovering the genetic architecture of agronomic traits. To this end, two populations of soybean, consisting of 342 landraces and 1062 improved lines, were genotyped with the SoySNP50K Illumina BeadChip containing 52,041 single nucleotide polymorphisms (SNPs), and systematically phenotyped for 9 agronomic traits. A cross-population composite likelihood ratio (XP-CLR) method was used to screen the signals of selective sweeps. A total of 125 candidate selection regions were identified, many of which harbored genes potentially involved in crop improvement. To further investigate whether these candidate regions were in fact enriched for genes affected by selection, genome-wide association studies (GWAS) were conducted on 7 selection traits targeted in soybean breeding (grain yield, plant height, lodging, maturity date, seed coat color, seed protein and oil content) and 2 non-selection traits (pubescence and flower color). Major genomic regions associated with selection traits overlapped with candidate selection regions, whereas no overlap of this kind occurred for the non-selection traits, suggesting that the selection sweeps identified are associated with traits of agronomic importance. Multiple novel loci and refined map locations of known loci related to these traits were also identified. These findings illustrate that comparative genomic analyses, especially when combined with GWAS, are a promising approach to dissect the genetic architecture of complex traits.

Agronomic viability of New Zealand spinach and kale intercropping.

Science.gov (United States)

Cecílio, Arthur B; Bianco, Matheus S; Tardivo, Caroline F; Pugina, Gabriel C M

2017-01-01

The intercropping is a production system that aims to provide increased yield with less environmental impact, due to greater efficiency in the use of natural resources and inputs involved in the production process. An experiment was carried out to evaluate the agronomic viability of kale and New Zealand spinach intercropping as a function of the spinach transplanting time. (0, 14, 28, 42, 56, 70, 84 and 98 days after transplanting of the kale). The total yield (TY) and yield per harvest (YH) of the kale in intercropping did not differ from those obtained in monoculture. The spinach TY was influenced by the transplanting time, the earlier the transplanting, the higher the TY. The spinach YH was not influenced by the transplanting time, but rather by the cultivation system. In intercropping, the spinach YH was 13.5% lower than in monoculture. The intercropping was agronomically feasible, since the land use efficiency index, which was not influenced by the transplanting time, had an average value of 1.71, indicating that the intercropping produced 71% more kale and spinach than the same area in monoculture. Competitiveness coefficient, aggressiveness and yield loss values showed that kale is the dominating species and spinach is the dominated.

DEVELOPMENT OF ACID-SOIL TOLERANT CORN (Zea mays L. WITH HIGH-QUALITY PROTEIN

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E.S. Halimi

2011-06-01

Full Text Available Corn is an important food crop in Indonesia. Plant expansion has been hampered by soil-acidity problem and the protein content of many corn varieties was low. This research initiates development of soil-acid-tolerant corn with high-quality-protein content. Research was done on 12 factorial treatments and 3 replications as blocks in RCBD. The first factor was corn populations: Toray-1(G1, Toray-2(G2, GS-5(G3 and GS-10(G4. The second factor was fertilizations: P1(69 kg N+36 kg P2O5+15 kg K2O per ha; P2(115 kg N+54 kg P2O5+30 kg K2O per ha; and P3(161 kg N+72 kg P2O5+45 kg K2O per ha. The observed variables consisted of several agronomic traits, including the protein content. Results indicated that the corn populations, in general, showed good agronomic traits. The differences were mostly between populations, not between fertilizations, and no interaction was observed. The yield potential ranged from 4.25 to 6.47 ton dry seeds per ha. The protein content of seed resulted from cross ranged from 9.84% to 11.30%, as compared to the parents of 9.11% and 12.62%. This research concludes that genetic factors play an important role as confirmed by heritability estimate (h2=0.75.

Agronomic behaviour of some Cynodon dactylon ecotypes for turfgrass use in the Mediterranean climate

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Roberto Viggiani

2015-02-01

Full Text Available In Italy, the expansion of turfgrasses is limited by the lack of suitable species for cultivation in the Mediterranean climate. With this view, Mi.Te.A.Med. (Turfgrass improvement in the Mediterranean climate research project was developed with the main purpose to find out and agronomically characterise native turfgrass species of Southern and Central Italy and to compare them with some commercial cultivars. During the first step of the research, 11 sites from 6 regions of Southern and Central Italy were identified. In these sites 24 ecotypes of Cynodon dactylon L. (Pers. were collected and their habitus, phenology plus some biometric parameters have been determined. During the two years of research both botanic and agronomic characterisation of the collected C. dactylon ecotypes and their comparison with 3 commercial cultivars (Panama, Transcontinental and Yukon was carried out. In the first year the colour loss interval was assessed. In the second year, colour index was measured by an electronic colorimeter, weekly growth rate was measured by a turfmeter, turf quality and ground cover percentage were assessed by visual estimate. Some native accessions showed behaviour similar to commercial cultivars while an ecotype from the Abruzzo region showed better results compared to the commercial cultivars for several quality indices.

Evaluating agronomic effectiveness of phosphate rocks using nuclear and related techniques: Results from an FAO/IAEA co-ordinated research project

International Nuclear Information System (INIS)

Zapata, F.

2000-01-01

An FAO/IAEA Co-ordinated Research Project, 'The use of nuclear and related techniques for evaluating the agronomic effectiveness of phosphatic fertilisers, in particular rock phosphates', was in operation during the period 1993-98. The research network comprised twenty-three scientists, of whom seventeen were in developing countries, with six in industrialized nations. Conventional and 32 P-isotope techniques were utilized to assess the bioavailability of P in soils amended with phosphate rock (PR) and water-soluble fertilisers, and to evaluate the agronomic effectiveness of PR products. No single chemical extraction method was found to be suitable for all soils and fertilisers. The Pi strip method showed promising results, but more testing is needed with tropical acid soils. The 32 P-phosphate-exchange kinetics method allowed a complete characterization of P dynamics, and provided basic information for estimating the kinetic pools of soil P. The agronomic effectiveness (AE) of PRs depends on their solubility (reactivity), which is related to the degree of carbonate substitution for phosphate in the apatite structure. Rock phosphates of low reactivity were unsuitable for direct application to annual crops. Research in Venezuela, China, Cuba, Brazil, and Thailand demonstrated that AE can be increased by partial acidulation, or by mixing with organic materials or a water-soluble source. The AE can be enhanced also through inoculation with mycorrhizal fungi and rhizobacteria. The AE, which depends on species, is particularly high in crops such as canola and lupin that exude organic acids from the roots. Agronomic effectiveness of PR is higher on soils with low pH, low available P, low exchangeable Ca, high cation exchange capacity and high organic-matter content. The 32 P-techniques are powerful tools for studying the factors that affect AE. Information from field trials was used to create a database for validating a model for providing recommendations for PR

Development of iron and zinc enriched mungbean (Vigna radiata L.) cultivars with agronomic traits in consideration

NARCIS (Netherlands)

Singh, R.

2013-01-01

Malnutrition in India, particularly among women, children and adolescents is an emergency that needs immediate attention in this fast growing and developing country. Micronutrient deficiencies are threatening public health in India more and more. Deficiencies of micronutrients drastically affect

Evaluation of genetic diversity among soybean (Glycine max) genotypes using univariate and multivariate analysis.

Science.gov (United States)

Oliveira, M M; Sousa, L B; Reis, M C; Silva Junior, E G; Cardoso, D B O; Hamawaki, O T; Nogueira, A P O

2017-05-31

The genetic diversity study has paramount importance in breeding programs; hence, it allows selection and choice of the parental genetic divergence, which have the agronomic traits desired by the breeder. This study aimed to characterize the genetic divergence between 24 soybean genotypes through their agronomic traits, using multivariate clustering methods to select the potential genitors for the promising hybrid combinations. Six agronomic traits evaluated were number of days to flowering and maturity, plant height at flowering and maturity, insertion height of the first pod, and yield. The genetic divergence evaluated by multivariate analysis that esteemed first the Mahalanobis' generalized distance (D 2 ), then the clustering using Tocher's optimization methods, and then the unweighted pair group method with arithmetic average (UPGMA). Tocher's optimization method and the UPGMA agreed with the groups' constitution between each other, the formation of eight distinct groups according Tocher's method and seven distinct groups using UPGMA. The trait number of days for flowering (45.66%) was the most efficient to explain dissimilarity between genotypes, and must be one of the main traits considered by the breeder in the moment of genitors choice in soybean-breeding programs. The genetic variability allowed the identification of dissimilar genotypes and with superior performances. The hybridizations UFU 18 x UFUS CARAJÁS, UFU 15 x UFU 13, and UFU 13 x UFUS CARAJÁS are promising to obtain superior segregating populations, which enable the development of more productive genotypes.

Repeatability, number of harvests, and phenotypic stability of dry matter yield and quality traits of Panicum maximum jacq.

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Francisco Duarte Fernandes

2017-04-01

Full Text Available Selection of superior forage genotypes is based on agronomic traits assayed in repeated measures. The questions are how repeatable the performance of individual genotypes is and how many harvests are needed to select the best genotypes. The objectives were to estimate repeatability coefficients of dry matter yield (DMY and forage quality, their phenotypic stability and the number of harvests needed for an accurate selection. Two randomized complete block design experiments data with 24 genotypes each, undergoing 12 and 16 harvests, over a period of 2 and 3 years, respectively, were used. The DMY repeatability estimates ranged from 0.42 to 0.55, suggesting a low heritability. The mean numbers of repeated measures were 5 and 7 harvests for 0.80 and 0.85 accuracy, respectively. The inclusion of the first two harvests negatively affects the estimates. Repeatability for quality traits ranged from 0.30 to 0.69, indicating low to moderate heritability.

Genome-wide association study for behavior, type traits, and muscular development in Charolais beef cattle

NARCIS (Netherlands)

Vallée, A.; Daures, J.; Arendonk, van J.A.M.; Bovenhuis, H.

2016-01-01

Behavior, type traits, and muscular development are of interest for beef cattle breeding. Genome-wide association studies (GWAS) enable the identification of candidate genes, which enables genebased selection and provides insight in the genetic architecture of these traits. The objective of the

Genetic diversity of bread wheat genotypes in Iran for some nutritional value and baking quality traits.

Science.gov (United States)

Amiri, Reza; Sasani, Shahryar; Jalali-Honarmand, Saeid; Rasaei, Ali; Seifolahpour, Behnaz; Bahraminejad, Sohbat

2018-02-01

Genetic variation among 78 irrigated bread wheat genotypes was studied for their nutritional value and baking quality traits as well as some agronomic traits. The experiment was conducted in a randomized complete block design with three replicates under normal and terminal drought stress conditions in Kermanshah, Iran during 2012-2013 cropping season. The results of combined ANOVA indicated highly significant genotypic differences for all traits. All studied traits except grain yield, hectoliter weight and grain fiber content were significantly affected by genotype × environment interaction. Drought stress reduced grain yield, thousand kernel weight, gluten index, grain starch content and hectoliter weight and slightly promoted grain protein and fiber contents, falling number, total gluten and ratio of wet gluten to grain protein content. Grain yield by 31.66% and falling number by 9.20% attained the highest decrease and increase due to drought stress. There were negative and significant correlations among grain yield with grain protein and fiber contents under both conditions. Results of cluster analysis showed that newer genotypes had more grain yield and gluten index than older ones, but instead, they had the lower grain protein and fiber contents. It is thought that wheat breeders have bred cultivars with high grain yield, low protein content, and improved bread-making attributes during last seven decades. While older genotypes indicated significantly higher protein contents, and some of them had higher gluten index. We concluded from this study that it is imperative for breeders to pay more attention to improve qualitative traits coordinated to grain yield.

Functional mechanisms of drought tolerance in subtropical maize (Zea mays L.) identified using genome-wide association mapping.

Science.gov (United States)

Thirunavukkarasu, Nepolean; Hossain, Firoz; Arora, Kanika; Sharma, Rinku; Shiriga, Kaliyugam; Mittal, Swati; Mohan, Sweta; Namratha, Pottekatt Mohanlal; Dogga, Sreelatha; Rani, Tikka Shobha; Katragadda, Sumalini; Rathore, Abhishek; Shah, Trushar; Mohapatra, Trilochan; Gupta, Hari Shankar

2014-12-24

Earlier studies were focused on the genetics of temperate and tropical maize under drought. We identified genetic loci and their association with functional mechanisms in 240 accessions of subtropical maize using a high-density marker set under water stress. Out of 61 significant SNPs (11 were false-discovery-rate-corrected associations), identified across agronomic traits, models, and locations by subjecting the accessions to water stress at flowering stage, 48% were associated with drought-tolerant genes. Maize gene models revealed that SNPs mapped for agronomic traits were in fact associated with number of functional traits as follows: stomatal closure, 28; flowering, 15; root development, 5; detoxification, 4; and reduced water potential, 2. Interactions of these SNPS through the functional traits could lead to drought tolerance. The SNPs associated with ABA-dependent signalling pathways played a major role in the plant's response to stress by regulating a series of functions including flowering, root development, auxin metabolism, guard cell functions, and scavenging reactive oxygen species (ROS). ABA signalling genes regulate flowering through epigenetic changes in stress-responsive genes. ROS generated by ABA signalling are reduced by the interplay between ethylene, ABA, and detoxification signalling transductions. Integration of ABA-signalling genes with auxin-inducible genes regulates root development which in turn, maintains the water balance by regulating electrochemical gradient in plant. Several genes are directly or indirectly involved in the functioning of agronomic traits related to water stress. Genes involved in these crucial biological functions interacted significantly in order to maintain the primary as well as exclusive functions related to coping with water stress. SNPs associated with drought-tolerant genes involved in strategic biological functions will be useful to understand the mechanisms of drought tolerance in subtropical maize.

Introgression lines of Triticum aestivum x Aegilops tauschii: Agronomic and nutritional value

Science.gov (United States)

Eighty-five single homozygous substitution lines (SLs) of the Aegilops tauschii D genome in Chinese Spring (CS) hexaploid wheat (Triticum aestivum L.) genetic background were evaluated for agronomic, phenotypic and ionome profiles during three years of field experiments. An augmented design with a r...

Agronomical and molecular characterization of banana germplasm Caracterização agronômica e molecular de germoplasma de bananeira

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Lorenna Alves Mattos

2010-02-01

Full Text Available The objective of the present work was to characterize banana accessions from the Germplasm Bank at Embrapa Mandioca e Fruticultura Tropical (Brazil, using agronomical, physical and physicochemical characteristics of fruit and simple sequence repeats (SSR markers. Twenty-six accessions were analyzed, in which high genetic variability was found, especially for the agronomical characters number of fruit and weight of bunch. Accessions with high contents of carotenoids (diploid 'Jaran', polyphenols (triploid 'Caipira' and tetraploid 'Teparod' and vitamin C (diploid 'Tuugia' and an unknown triploid AAA in the fruit were identified. Thirteen microsatellite primers revealed an average of 7.23 alleles, which showed high variability. A dendrogram was prepared using the Gower algorithm for the distance matrices obtained from the agronomical, physical and physicolchemical analysis of fruit and SSR markers. Adopting the average genetic divergence as the cut-off point, three clusters were found: G1, formed by the diploids 'Jaran', 028003-01 and M-48; G2, by the diploids 'Malbut' and 'Ido 110'; and G3, by 21 tri-and tetraploid accessions, including one diploid, 'Tuugia'. The triploids with the B genome 'Thap Maeo', 'Walha', 'Pacha Nadan' and 'Champa Madras' were grouped in G2. Results from this work can be used for breeding hybrids with good agronomical traits and fruit quality.O objetivo deste trabalho foi caracterizar acessos de bananeira do Banco de Germoplasma da Embrapa Mandioca e Fruticultura Tropical, por meio de características agronômicas, físicas e físico-químicas dos frutos e por marcadores "Simple sequence repeats" (SSR. Foram analisados 26 acessos, nos quais observou-se ampla variabilidade genética, em especial para número de frutos e peso de cacho. Foram identificados acessos com altos teores de carotenoides (diploide 'Jaran', polifenóis (tetraploide 'Teparod' e vitamina C (diploide 'Tuugia' e um triploide AAA desconhecido. Os 13

Genetic variation of soybean agronomic characters induced by irradiation of seed

International Nuclear Information System (INIS)

He Zhihong; Wang Jinling

1988-02-01

Dry seeds of three soybean varieties were irradiated by 60 Co γ ray with dosage of 4.1C/kg. The varieties irradiated were Fengshou No. 10, Donghong 74-403 and Heinong No. 26, and nonirradiated seeds of the corresponding variety was used as a control. The following genetic parameters of the nine agronomic characters were estimated, including genotypic coefficient of variation, genotypic variance, broad sense heritanility and genetic advance expected through selection. Three types of plant in M 2 and M 3 were used for the estimation of these parameters which comprise semisterility (MS), fertility (MF) in M 1 and control (CK). The genetic advance expected through selection was compared with the actual effect of selection for date of maturity, seed weigh per plant and 100 seed wight. The pattern of the genetic variation in the early generations of the induced population was analysed. Problems of selection for main agronomic characters in the early generations, and significance of fertility of M 1 plants for mutation breeding were discussed

Brassicaceae Mustards: Traditional and Agronomic Uses in Australia and New Zealand

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Mahmudur Rahman

2018-01-01

Full Text Available Commonly cultivated Brassicaceae mustards, namely garlic mustard (Alliaria petiolata, white mustard (Brassica alba, Ethiopian mustard (B. carinata, Asian mustard (B. juncea, oilseed rape (B. napus, black mustard (B. nigra, rapeseed (B. rapa, white ball mustard (Calepina irregularis, ball mustard (Neslia paniculata, treacle mustard (Erysimum repandum, hedge mustard (Sisymbrium officinale, Asian hedge mustard (S. orientale, smooth mustard (S. erysimoides and canola are the major economically important oilseed crops in many countries. Mustards were naturalized to Australia and New Zealand and Australia is currently the second largest exporter of Brassicaceae oilseeds to meet the global demand for a healthy plant-derived oil, high in polyunsaturated fats. Apart from providing edible oil, various parts of these plants and many of their phytochemicals have been used traditionally for both agronomic as well as medicinal purposes, with evidence of their use by early Australian and New Zealand settlers and also the indigenous population. This review provides an overview of the current knowledge of traditional and agronomic uses of Brassicaceae oilseeds and mustards with a focus on their importance in Australia and New Zealand.

Brassicaceae Mustards: Traditional and Agronomic Uses in Australia and New Zealand.

Science.gov (United States)

Rahman, Mahmudur; Khatun, Amina; Liu, Lei; Barkla, Bronwyn J

2018-01-21

Commonly cultivated Brassicaceae mustards, namely garlic mustard ( Alliaria petiolata ), white mustard ( Brassica alba ), Ethiopian mustard ( B. carinata ), Asian mustard ( B. juncea ), oilseed rape ( B. napus ), black mustard ( B. nigra ), rapeseed ( B. rapa ), white ball mustard ( Calepina irregularis ), ball mustard ( Neslia paniculata ), treacle mustard ( Erysimum repandum ), hedge mustard ( Sisymbrium officinale ), Asian hedge mustard ( S. orientale ), smooth mustard ( S. erysimoides ) and canola are the major economically important oilseed crops in many countries. Mustards were naturalized to Australia and New Zealand and Australia is currently the second largest exporter of Brassicaceae oilseeds to meet the global demand for a healthy plant-derived oil, high in polyunsaturated fats. Apart from providing edible oil, various parts of these plants and many of their phytochemicals have been used traditionally for both agronomic as well as medicinal purposes, with evidence of their use by early Australian and New Zealand settlers and also the indigenous population. This review provides an overview of the current knowledge of traditional and agronomic uses of Brassicaceae oilseeds and mustards with a focus on their importance in Australia and New Zealand.

Parenting behaviours associated with the development of adaptive and maladaptive offspring personality traits.

Science.gov (United States)

Johnson, Jeffrey G; Liu, Lydia; Cohen, Patricia

2011-08-01

To investigate the associations of beneficial parenting behaviours with adaptive and maladaptive offspring personality traits that persist into adulthood among individuals in the community. Families (n = 669) participating in the Children in the Community Study were interviewed during the childhood, adolescence, emerging adulthood, and adulthood of the offspring at the mean ages of 6, 14, 16, 22, and 33 years. Twelve types of beneficial maternal and paternal child-rearing behaviour, reported by offspring at the mean age of 16 years, were associated with elevated offspring personality resiliency, at the mean ages of 22 and 33 years, and with low offspring personality disorder trait levels. These longitudinal associations remained significant when histories of childhood behaviour problems and parental psychiatric disorder were controlled statistically. Similar linear (that is, dose-dependent) associations were observed between the number of beneficial parenting behaviours during childhood and adaptive and maladaptive offspring traits at the mean ages of 22 and 33 years. Maternal and paternal behaviours were independently associated with both adaptive and maladaptive offspring traits. Beneficial maternal and paternal child-rearing behaviours may promote the development of adaptive offspring personality traits that endure into adulthood, and they may be prospectively associated with reduced levels of maladaptive offspring traits. These associations may not be attributable to childhood behaviour problems or parental psychiatric disorders, and they may be equally evident during early and middle adulthood.

Enhancement of the agronomic effectiveness of phosphate rock in a ferralsol from Cuba

International Nuclear Information System (INIS)

Rodriguez, R.; Herrera, J.A.; Garcia, A.; Nuviola, A.

2002-01-01

The Ferralsols from Ciego de Avila, Cuba, have a pH near neutrality and very low exchangeable acidity, thus, they are not suitable for direct application of phosphate rock. In laboratory and greenhouse experiments, different P fertilizers were tested in order to assess their agronomic effectiveness through the use of nuclear and conventional methods. The phosphate rocks (PRs) came from different deposits (Higuanojo, La Pimienta and Trinidad de Guedes from Cuba; Riecito, Baja California and North Carolina from other countries). Partial acidulation (PA) of some of these rocks was also evaluated. Trinidad de Guedes PAPRs were found to be highly effective compared to their natural PR when evaluated through dry matter production, P uptake and isotopic parameters. Further field experiments are needed to validate the greenhouse results to enhance the agronomic effectiveness of the local Trinidad de Guedes PR through partial acidulation. (author)

Bio-agronomic Evaluation of Old and Modern Wheat, Spelt and Emmer Genotypes for Low-input Farming in Mediterranean Environment

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Pasquale Codianni

2007-09-01

Full Text Available Low-input cropping systems are characterised by the reduction of pesticides and chemical fertilizers and, often, by the use of old cultivars to realize sustainable crop production which can easily integrate in the European Union agricultural subsidies. Market prices and environmental concerns favour low-input wheat production systems, nevertheless protein standards become particularly difficult to achieve in these conditions due to a minimal nitrogen supply. This study assesses the efficiency of a specific breeding program dedicated to improve yield and quality in emmer and spelt wheat in low-input environments. Ten tetraploid (emmer and durum wheat and four hexaploid (spelt and bread wheat wheat genotypes (including parent cultivars and offspring breeding lines selected for adaptation to low-input conditions were investigated for 1 yr (2003-2004 in Italy in three locations in conventional and low-input cropping systems. The main agro-morphological and qualitative traits were recorded (HD, PH, GY, PC GPY, TKW, TW, GC. The results of this study show encouraging agronomic performances of new emmer and spelt genotypes under conventional and low-input cropping systems. The new genotypes are characterized by a yield potential similar to that of the modern wheat cultivar as well as by a protein content higher than old emmer and spelt accessions. The new genetic materials were also characterized by a higher responsiveness to improved environmental conditions. The results described in this study support the suitability of modern emmer and spelt genotypes, improved by introgressing wheat yield and quality traits, for organic farming in Mediterranean environments.

Bio-agronomic Evaluation of Old and Modern Wheat, Spelt and Emmer Genotypes for Low-input Farming in Mediterranean Environment

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Michele Fornara

2011-02-01

Full Text Available Low-input cropping systems are characterised by the reduction of pesticides and chemical fertilizers and, often, by the use of old cultivars to realize sustainable crop production which can easily integrate in the European Union agricultural subsidies. Market prices and environmental concerns favour low-input wheat production systems, nevertheless protein standards become particularly difficult to achieve in these conditions due to a minimal nitrogen supply. This study assesses the efficiency of a specific breeding program dedicated to improve yield and quality in emmer and spelt wheat in low-input environments. Ten tetraploid (emmer and durum wheat and four hexaploid (spelt and bread wheat wheat genotypes (including parent cultivars and offspring breeding lines selected for adaptation to low-input conditions were investigated for 1 yr (2003-2004 in Italy in three locations in conventional and low-input cropping systems. The main agro-morphological and qualitative traits were recorded (HD, PH, GY, PC GPY, TKW, TW, GC. The results of this study show encouraging agronomic performances of new emmer and spelt genotypes under conventional and low-input cropping systems. The new genotypes are characterized by a yield potential similar to that of the modern wheat cultivar as well as by a protein content higher than old emmer and spelt accessions. The new genetic materials were also characterized by a higher responsiveness to improved environmental conditions. The results described in this study support the suitability of modern emmer and spelt genotypes, improved by introgressing wheat yield and quality traits, for organic farming in Mediterranean environments.

Properties of biochar derived from wood and high-nutrient biomasses with the aim of agronomic and environmental benefits.

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Rimena R Domingues

Full Text Available Biochar production and use are part of the modern agenda to recycle wastes, and to retain nutrients, pollutants, and heavy metals in the soil and to offset some greenhouse gas emissions. Biochars from wood (eucalyptus sawdust, pine bark, sugarcane bagasse, and substances rich in nutrients (coffee husk, chicken manure produced at 350, 450 and 750°C were characterized to identify agronomic and environmental benefits, which may enhance soil quality. Biochars derived from wood and sugarcane have greater potential for improving C storage in tropical soils due to a higher aromatic character, high C concentration, low H/C ratio, and FTIR spectra features as compared to nutrient-rich biochars. The high ash content associated with alkaline chemical species such as KHCO3 and CaCO3, verified by XRD analysis, made chicken manure and coffee husk biochars potential liming agents for remediating acidic soils. High Ca and K contents in chicken manure and coffee husk biomass can significantly replace conventional sources of K (mostly imported in Brazil and Ca, suggesting a high agronomic value for these biochars. High-ash biochars, such as chicken manure and coffee husk, produced at low-temperatures (350 and 450°C exhibited high CEC values, which can be considered as a potential applicable material to increase nutrient retention in soil. Therefore, the agronomic value of the biochars in this study is predominantly regulated by the nutrient richness of the biomass, but an increase in pyrolysis temperature to 750°C can strongly decrease the adsorptive capacities of chicken manure and coffee husk biochars. A diagram of the agronomic potential and environmental benefits is presented, along with some guidelines to relate biochar properties with potential agronomic and environmental uses. Based on biochar properties, research needs are identified and directions for future trials are delineated.

Applications of nuclear techniques in agronomy as a contribution to the integral formation of agronomical engineers

International Nuclear Information System (INIS)

Núñez Meireles, Mónica; Hernández Martínez, Asiel; Charbonet Martell, Miguel Enrique

2016-01-01

Nowadays, nuclear research applied to agriculture and food is a reality, and is being supported by institutions like the International Atomic Energy Agency and the United Nations Food and Agriculture Organization. Stable and radioactive isotopes are used in different ways in agricultural research mainly in the determination of required conditions to optimize efficiency in the use of fertilizers and water, the development of high yield agricultural and horticultural varieties, reduction of diseases due to contaminated food, and soil erosion studies among others. Accordingly to the study carried out, there is not much knowledge about nuclear phenomena applied to agronomy. Nevertheless there is a positive criterion about the introduction of these topics in Agronomical Engineers education, by mean of implementing an optional subject, aimed at explaining different spheres of action of nuclear techniques in Agriculture. Consequently, it would be possible achieving the linkage of agronomical engineers with the nuclear techniques, though respecting at the same time the professional model of this career. Moreover, it is also proposed to include laboratory practices in the curriculum of this career, using nuclear techniques and showing their proper linkage with Agronomy. (author)

Callous-unemotional traits and brain structure: Sex-specific effects in anterior insula of typically-developing youths

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Nora Maria Raschle

2018-01-01

General scientific summary: This study suggests that callous-unemotional traits have a neuroanatomical correlate within typically developing boys, but not girls. Bilateral anterior insula volume explains up to 19% of the variance in callous-unemotional traits in boys.

Development of iron and zinc enriched mungbean (Vigna radiata L.) cultivars with agronomic traits in consideration

OpenAIRE

Singh, R.

2013-01-01

Malnutrition in India, particularly among women, children and adolescents is an emergency that needs immediate attention in this fast growing and developing country. Micronutrient deficiencies are threatening public health in India more and more. Deficiencies of micronutrients drastically affect growth, metabolism and reproductive phase in humans as it does in plants and animals. Cereal and pulse based Indian diets are qualitatively deficient in micronutrients such as iron, calcium, vitamin ...

Traits to Ecosystems: The Ecological Sustainability Challenge When Developing Future Energy Crops

International Nuclear Information System (INIS)

Weih, Martin; Hoeber, Stefanie; Beyer, Friderike; Fransson, Petra

2014-01-01

Today, we are undertaking great efforts to improve biomass production and quality traits of energy crops. Major motivation for developing those crops is based on environmental and ecological sustainability considerations, which however often are de-coupled from the trait-based crop improvement programs. It is now time to develop appropriate methods to link crop traits to production system characteristics set by the plant and the biotic communities influencing it; and to the ecosystem processes affecting ecological sustainability. The relevant ecosystem processes involve the net productivity in terms of biomass and energy yields, the depletion of energy-demanding resources (e.g., nitrogen, N), the carbon dynamics in soil and atmosphere, and the resilience and temporal stability of the production system. In a case study, we compared aspects of N use efficiency in various varieties of an annual (spring wheat) and perennial (Salix) energy crop grown under two nutrient regimes in Sweden. For example, we found considerable variation among crops, varieties, and nutrient regimes in the energy yield per plant-internal N (megajoule per gram per year), which would result in different N resource depletion per unit energy produced.

Traits to Ecosystems: The Ecological Sustainability Challenge When Developing Future Energy Crops

Energy Technology Data Exchange (ETDEWEB)

Weih, Martin, E-mail: martin.weih@slu.se; Hoeber, Stefanie; Beyer, Friderike [Department of Crop Production Ecology, Swedish University of Agricultural Sciences, Uppsala (Sweden); Fransson, Petra [Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Uppsala (Sweden)

2014-05-22

Today, we are undertaking great efforts to improve biomass production and quality traits of energy crops. Major motivation for developing those crops is based on environmental and ecological sustainability considerations, which however often are de-coupled from the trait-based crop improvement programs. It is now time to develop appropriate methods to link crop traits to production system characteristics set by the plant and the biotic communities influencing it; and to the ecosystem processes affecting ecological sustainability. The relevant ecosystem processes involve the net productivity in terms of biomass and energy yields, the depletion of energy-demanding resources (e.g., nitrogen, N), the carbon dynamics in soil and atmosphere, and the resilience and temporal stability of the production system. In a case study, we compared aspects of N use efficiency in various varieties of an annual (spring wheat) and perennial (Salix) energy crop grown under two nutrient regimes in Sweden. For example, we found considerable variation among crops, varieties, and nutrient regimes in the energy yield per plant-internal N (megajoule per gram per year), which would result in different N resource depletion per unit energy produced.

Novel gene expression tools for rice biotechnology

Science.gov (United States)

Biotechnology is an effective and important method of improving both quality and agronomic traits in rice. We are developing novel molecular tools for genetic engineering, with a focus on developing novel transgene expression control elements (i.e. promoters) for rice. A suite of monocot grass promo...

Mutagenic effects on indica rice carried by satellite

International Nuclear Information System (INIS)

Wu Dezhi; Liu Yongzhu; Guo Tao; Zhang Jianguo; Chen Zhiqiang; Wang Hui

2010-01-01

Dried seeds of four indica rice varieties were carried into space by satellite Shijia No.8, the mutagenic effects of space condition on the seeds vigor and agronomic traits in the SP 1 generation, and on the agronomic traits, amylose conent and bacterial resistance in the SP 2 generation were studied. The results showed that the space condition slightly damaged rice seeds, with the physiological damage rate of germination rate, bud length, plant height and seed-setting rate in the SP 1 ranged from 0 to 26.9%. Different varieties responded differently to the space conditions, and the order from strong to weak was Gui 99, Hanghui 7, R998, Jinhang 138. Compared with the control, no trait showed segregation in the SP 1 generation. Some traits appeared larger segregation in the SP 2 generation, and the mutants of plant height, number of tillers, weight of grain, amylose content and bacterial blight resistance were isolated in the SP 2 generation, and these mutation traits could be inherited the SP 3 generation. Space conditions not only produced mutants of rice agronomic traits, but also produced mutants of rice quality and disease resistance. (authors)

Identification and Characterization of Quantitative Trait Loci for Shattering in Japonica Rice Landrace Jiucaiqing from Taihu Lake Valley, China

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Jinping Cheng

2016-11-01

Full Text Available Easy shattering reduces yield from grain loss during rice ( L. harvest. We characterized a nonshattering rice landrace Jiucaiqing from Taihu Lake valley in China. The breaking tensile strength (BTS; grams force, gf of the grain pedicel was measured using a digital force gauge to evaluate the degree of shattering at 0, 7, 14, 21, 28, and 35 d after heading (DAH. The BTS of Jiucaiqing did not significantly decrease with increasing DAH, maintaining a level of 152.2 to 195.9 gf, while that of IR26 decreased greatly during 0 to 14 DAH and finally stabilized at ∼100 gf. Then the chromosome segment substitution lines (CSSLs and near isogenic lines (NILs of Jiucaiqing in IR26 background were developed for quantitative trait loci (QTL mapping. Four putative QTL (, , , and for shattering were detected, and the was confirmed on chromosome 1. We further mapped to a 98.4-kb region, which contains 14 genes. Os01g62920 was considered to be a strong candidate for , which colocated with . Further quantitative real-time polymerase chain reaction (PCR analyses confirmed that the QTL can significantly decrease the expression of shattering related genes (, , , , and especially at the middle development stage at 10 and 15 cm panicle length, which causes rice shattering decrease. The elite allele and the NIL with desirable agronomic traits identified in this study could be useful for rice breeding.

Variations and Transmission of QTL Alleles for Yield and Fiber Qualities in Upland Cotton Cultivars Developed in China

Science.gov (United States)

Zhang, Tianzhen; Qian, Neng; Zhu, Xiefei; Chen, Hong; Wang, Sen; Mei, Hongxian; Zhang, Yuanming

2013-01-01

Cotton is the world’s leading cash crop, and genetic improvement of fiber yield and quality is the primary objective of cotton breeding program. In this study, we used various approaches to identify QTLs related to fiber yield and quality. Firstly, we constructed a four-way cross (4WC) mapping population with four base core cultivars, Stoneville 2B, Foster 6, Deltapine 15 and Zhongmiansuo No.7 (CRI 7), as parents in Chinese cotton breeding history and identified 83 QTLs for 11 agronomic and fiber quality traits. Secondly, association mapping of agronomical and fiber quality traits was based on 121 simple sequence repeat (SSR) markers using a general linear model (GLM). For this, 81 Gossypium hirsutum L. accessions including the four core parents and their derived cultivars were grown in seven diverse environments. Using these approaches, we successfully identified 180 QTLs significantly associated with agronomic and fiber quality traits. Among them were 66 QTLs that were identified via linkage disequilibrium (LD) and 4WC family-based linkage (FBL) mapping and by previously published family-based linkage (FBL) mapping in modern Chinese cotton cultivars. Twenty eight and 44 consistent QTLs were identified by 4WC and LD mapping, and by FBL and LD mapping methods, respectively. Furthermore, transmission and variation of QTL-alleles mapped by LD association in the three breeding periods revealed that some could be detected in almost all Chinese cotton cultivars, suggesting their stable transmission and some identified only in the four base cultivars and not in the modern cultivars, suggesting they were missed in conventional breeding. These results will be useful to conduct genomics-assisted breeding effectively using these existing and novel QTL alleles to improve yield and fiber qualities in cotton. PMID:23468939

Identification of heterotic loci associated with yield-related traits in Chinese common wild rice (Oryza rufipogon Griff.).

Science.gov (United States)

Luo, Xiaojin; Wu, Shuang; Tian, Feng; Xin, Xiaoyun; Zha, Xiaojun; Dong, Xianxin; Fu, Yongcai; Wang, Xiangkun; Yang, Jinshui; Sun, Chuanqing

2011-07-01

Many rice breeding programs have currently reached yield plateaus as a result of limited genetic variability in parental strains. Dongxiang common wild rice (Oryza rufipogon Griff.) is the progenitor of cultivated rice (Oryza sativa L.) and serves as an important gene pool for the genetic improvement of rice cultivars. In this study, heterotic loci (HLs) associated with six yield-related traits were identified in wild and cultivated rice and investigated using a set of 265 introgression lines (ILs) of O. rufipogon Griff. in the background of the Indica high-yielding cultivar Guichao 2 (O. sativa L.). Forty-two HLs were detected by a single point analysis of mid-parent heterosis values from test cross F(1) offspring, and 30 (71.5%) of these HLs showed significantly positive effects, consistent with the superiority shown by the F(1) test cross population in the six yield-related traits under study. Genetic mapping of hsp11, a locus responsible for the number of spikelets per panicle, confirmed the utility of these HLs. The results indicate that favorable HLs capable of improving agronomic traits are available. The identification of HLs between wild rice and cultivated rice could lead to a new strategy for the application of heterosis in rice breeding. Copyright © 2011. Published by Elsevier Ireland Ltd.

Sensitive period for developing a robust trait of appetitive aggression

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Anke eKöbach

2015-10-01

Full Text Available Violent behaviour can be intrinsically rewarding; especially combatants fighting in current civil wars present with elevated traits of appetitive aggression. The majority of these fighters were recruited as children or adolescents. In the present study we test whether there is a developmental period where combatants are sensitive for developing a robust trait of appetitive aggression.We investigated 95 combatants in their demobilization process that were recruited at different ages in the Kivu regions of the eastern Democratic Republic of Congo. Using random forest with conditional inference trees, we identified recruitment at the ages from 16 and 17 years as being predictive of the level of appetitive aggression; the number of lifetime, perpetrated acts was the most important predictor. We conclude that high levels of appetitive aggression develop in ex-combatants, especially in those recruited during their middle to late teenage, which is a developmental period marked by a natural inclination to exercise physical force. Consequently, ex-combatants may remain vulnerable for aggressive behaviour patterns and re-recruitment unless they are provided alternative strategies for dealing with their aggression.

PASSIOMA: Exploring Expressed Sequence Tags during Flower Development in Passiflora spp.

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Lucas Cutri

2012-01-01

Full Text Available The genus Passiflora provides a remarkable example of floral complexity and diversity. The extreme variation of Passiflora flower morphologies allowed a wide range of interactions with pollinators to evolve. We used the analysis of expressed sequence tags (ESTs as an approach for the characterization of genes expressed during Passiflora reproductive development. Analyzing the Passiflora floral EST database (named PASSIOMA, we found sequences showing significant sequence similarity to genes known to be involved in reproductive development such as MADS-box genes. Some of these sequences were studied using RT-PCR and in situ hybridization confirming their expression during Passiflora flower development. The detection of these novel sequences can contribute to the development of EST-based markers for important agronomic traits as well as to the establishment of genomic tools to study the naturally occurring floral diversity among Passiflora species.

Digester effluent’s agronomic and odor emission potential: A swine case study

Science.gov (United States)

This on-farm study looked at the full-scale treatment effects of anaerobic digestion on the composition of manure effluent from an agronomic and air quality perspective. The goal was to improve our understanding of the role that anaerobic digestion may play in managing manure as a fertilizer and in...

Agronomic, morphogenic and structural characteristics of Marandu grass in silvopastoral systems composed of babassu palm and grass monoculture

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Rosane Cláudia Rodrigues

2016-09-01

Full Text Available This study evaluated the agronomic, morphogenic and structural characteristics of palisadegrass (Urochloa brizantha in silvopastoral systems (SSP’s composed of babassu palms (Attalea speciosa and grass monoculture in the Pre-Amazon region of the state of Maranhão, Brazil. The study followed a completely randomized design, with the arrangement in split plots with six replicates for the evaluation of agronomic characteristics and 30 repetitions for the morphogenic and structural characteristics. The plots were divided into pasture environments with different palm densities (monoculture, 80, 131, 160 palms.ha-¹, and the subplots were divided into the different seasons (rainy and dry. Total forage production was affected (P 0.05 by pastoral system during the rainy season, but in the dry period, higher responses were obtained in SSPs. Overall, SSPs with 80 palms.ha-¹ favored the agronomic characteristics of pastures. Morphogenic and structural characteristics were favored by increasing palm densities. Leaf senescence and duration were not affected by the system.

Main biological characters of series of mutant waxy rices developed from irradiation-induced mutation

International Nuclear Information System (INIS)

Huang Ronghua; Zhang Shubiao; Zhang Qingqi; Yang Rencui; Lin Jinhu

2008-01-01

The main biological characters of the waxy male sterile lines, maintainer lines, restorer lines and waxy hybrids which had been developed by radiation-induced mutation were studied, and the grain quality of the waxy hybrids were analyzed as well. Sesults indicated that the mutant waxy rice had the same growth duration, similar agronomic characters, panicle and spikelet traits as parent. The waxy male-sterile line had the same pollen sterility characteristic as its parent male-sterile line. The waxy hybrid rice retained the yield potential as original hybrid rice, and the grain quality of the waxy hybrids was similar to the conventional waxy rice Ejinnuo 6. (authors)

Agronomic performance of rape seed (brassica napus L.) mutant lines under drought conditions

International Nuclear Information System (INIS)

Shah, S.A.; Ali, I.; Shah, S.J.A.; Rehman, K.; Rashid, A.

1995-01-01

Oil seed forms of Brassica napus are not well adapted to drought and the warner environments of Pakistan. Induced mutations were, therefore, utilized for improving drought tolerance efficiency of two napus cultivars. Induction of genetic variability, selection of desirable mutants and stabilization of mutants in acceptable agronomic background were carried out during 1988-1991. Fourteen promising mutants each of cv. Pak-cheen and Tower were evaluated for different agronomic characters in separate yield trials, under extremely drought conditions. The results demonstrated that yield potential of some mutants was very high and 9 mutants of cv. Pak-cheen and 8 mutants of cv. Tower significantly (P<0.05) out yield the local commercial cultivar. Eleven mutants in both the trials matured significantly earlier than the check. Nevertheless, more extensive testing of the drought tolerant lines under diversified environs of the country will help confirm these findings. (author)

Temperature-dependent development and reproductive traits of Tetranychus macfarlanei (Acari: Tetranychidae)

DEFF Research Database (Denmark)

Ullah, Mohammad Shaef; Haque, Md. Ahsanul; Nachman, Gösta

2012-01-01

Development and reproductive traits of Tetranychus macfarlanei Baker & Pritchard (Acari: Tetranychidae) were investigated on kidney bean, Phaseolus vulgaris L., at eleven constant temperatures. Tetranychus macfarlanei was able to develop and complete its life cycle at temperatures ranging from 17...

Within-trait heterogeneity in age group differences in personality domains and facets: implications for the development and coherence of personality traits.

Science.gov (United States)

Mõttus, René; Realo, Anu; Allik, Jüri; Esko, Tõnu; Metspalu, Andres; Johnson, Wendy

2015-01-01

The study investigated differences in the Five-Factor Model (FFM) domains and facets across adulthood. The main questions were whether personality scales reflected coherent units of trait development and thereby coherent personality traits more generally. These questions were addressed by testing if the components of the trait scales (items for facet scales and facets for domain scales) showed consistent age group differences. For this, measurement invariance (MI) framework was used. In a sample of 2,711 Estonians who had completed the NEO Personality Inventory 3 (NEO PI-3), more than half of the facet scales and one domain scale did not meet the criterion for weak MI (factor loading equality) across 12 age groups spanning ages from 18 to 91 years. Furthermore, none of the facet and domain scales met the criterion for strong MI (intercept equality), suggesting that items of the same facets and facets of the same domains varied in age group differences. When items were residualized for their respective facets, 46% of them had significant (p < 0.0002) residual age-correlations. When facets were residualized for their domain scores, a majority had significant (p < 0.002) residual age-correlations. For each domain, a series of latent factors were specified using random quarters of their items: scores of such latent factors varied notably (within domains) in correlations with age. We argue that manifestations of aetiologically coherent traits should show similar age group differences. Given this, the FFM domains and facets as embodied in the NEO PI-3 do not reflect aetiologically coherent traits.

Influence of agronomic variables on the macronutrient and micronutrient contents and thermal behavior of mate tea leaves (Ilex paraguariensis).

Science.gov (United States)

Jacques, Rosângela A; Arruda, Eduardo J; de Oliveira, Lincoln C S; de Oliveira, Ana P; Dariva, Cláudio; de Oliveira, J Vladimir; Caramão, Elina B

2007-09-05

The influence of agronomic variables (light intensity, age of leaves, and fertilization type) on the content of macronutrients and micronutrients (potassium, calcium, sodium, magnesium, manganese, iron, zinc, and copper) of tea leaves was assessed by acid digestion, followed by flame atomic absorption spectrometry (FAAS). The thermal behavior of mate tea leaves (Ilex paraguariensis) was also studied in this work. Samples of mate (Ilex paraguariensis) were collected in an experiment conducted under agronomic control at Erva-Mate Barão Commerce and Industry LTD (Brazil). The results showed that the mineral content in mate is affected by the agronomic variables investigated. In general, the content of mineral compounds analyzed is higher for younger leaves and for plants cultivated in shadow. Thermal analysis of samples indicated a similar behavior, with three typical steps of decomposition: loss of water, degradation of low-molecular weight compounds, and degradation of residual materials.

Agronomic Biofortification of Amaranthus dubius with Macro Nutrients and Vitamin A

Science.gov (United States)

Mala, R.; Celsia, A. S. Ruby; Mahalakshmi, R.; Rajeswari, S.

2017-08-01

Agronomic biofortification of Amaranthus dubius with carbohydrates, proteins and Vitamin A using Spirulina platensis is reported in the present preliminary study. S. platensis was applied basally to field and its influence on germination, concentration of proteins, carbohydrates, chlorophyll, carotenoids and antioxidant activity of leaves were assessed in CO1 variety of A. dubius. Biofortification of the nutrients were evaluated on 5th and 20th day. Germination was optimum at 0.005 % of S. platensis as a fertilizer and the agronomic fortifying agent. Germination in control was 82 % and 95 % in 0.005 % of S. platensis fortification. The concentration of total chlorophyll in control and biofortified leaf on 20th day were 85.6 mg/g and 325 mg/g of dried leaf. The concentration of proteins was 71.93 mg/g and 450 mg/g on 20th day in control and fortified leaves. S. platensis applied field produced leaves fortified with 1.27 % of vitamin A aldehyde. Antioxidant activity of control leaf was 34.85 % and it was significantly increased in fortified leaves to 87 %. Thus the study confirms the fortification of leaf with proteins, carbohydrates and vitamin A.

Applied Genetics and Genomics in Alfalfa Breeding

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E. Charles Brummer

2012-03-01

Full Text Available Alfalfa (Medicago sativa L., a perennial and outcrossing species, is a widely planted forage legume for hay, pasture and silage throughout the world. Currently, alfalfa breeding relies on recurrent phenotypic selection, but alternatives incorporating molecular marker assisted breeding could enhance genetic gain per unit time and per unit cost, and accelerate alfalfa improvement. Many major quantitative trait loci (QTL related to agronomic traits have been identified by family-based QTL mapping, but in relatively large genomic regions. Candidate genes elucidated from model species have helped to identify some potential causal loci in alfalfa mapping and breeding population for specific traits. Recently, high throughput sequencing technologies, coupled with advanced bioinformatics tools, have been used to identify large numbers of single nucleotide polymorphisms (SNP in alfalfa, which are being developed into markers. These markers will facilitate fine mapping of quantitative traits and genome wide association mapping of agronomic traits and further advanced breeding strategies for alfalfa, such as marker-assisted selection and genomic selection. Based on ideas from the literature, we suggest several ways to improve selection in alfalfa including (1 diversity selection and paternity testing, (2 introgression of QTL and (3 genomic selection.

Evaluating agronomic effectiveness of phosphate rocks using nuclear and related techniques: Results from an FAO/IAEA co-ordinated research project

Energy Technology Data Exchange (ETDEWEB)

Zapata, F [International Atomic Energy Agency, Vienna (Austria)

2000-06-01

An FAO/IAEA Co-ordinated Research Project, 'The use of nuclear and related techniques for evaluating the agronomic effectiveness of phosphatic fertilisers, in particular rock phosphates', was in operation during the period 1993-98. The research network comprised twenty-three scientists, of whom seventeen were in developing countries, with six in industrialized nations. Conventional and {sup 32}P-isotope techniques were utilized to assess the bioavailability of P in soils amended with phosphate rock (PR) and water-soluble fertilisers, and to evaluate the agronomic effectiveness of PR products. No single chemical extraction method was found to be suitable for all soils and fertilisers. The Pi strip method showed promising results, but more testing is needed with tropical acid soils. The {sup 32}P-phosphate-exchange kinetics method allowed a complete characterization of P dynamics, and provided basic information for estimating the kinetic pools of soil P. The agronomic effectiveness (AE) of PRs depends on their solubility (reactivity), which is related to the degree of carbonate substitution for phosphate in the apatite structure. Rock phosphates of low reactivity were unsuitable for direct application to annual crops. Research in Venezuela, China, Cuba, Brazil, and Thailand demonstrated that AE can be increased by partial acidulation, or by mixing with organic materials or a water-soluble source. The AE can be enhanced also through inoculation with mycorrhizal fungi and rhizobacteria. The AE, which depends on species, is particularly high in crops such as canola and lupin that exude organic acids from the roots. Agronomic effectiveness of PR is higher on soils with low pH, low available P, low exchangeable Ca, high cation exchange capacity and high organic-matter content. The {sup 32}P-techniques are powerful tools for studying the factors that affect AE. Information from field trials was used to create a database for validating a model for providing recommendations

Development of EST-SSR markers in flowering Chinese cabbage (Brassica campestris L. ssp. chinensis var. utilis Tsen et Lee) based on de novo transcriptomeic assemblies

Science.gov (United States)

Flowering Chinese cabbage is one of the most important vegetable crops in southern China. Genetic improvement of various agronomic traits in this crop is underway to meet high market demand in the region, but the progress is hampered by limited number of molecular markers available in this crop. Thi...

Towards a unified model for leaf trait and trait-environment relationships

Science.gov (United States)

Wang, H.; Harrison, S. P.; Prentice, I. C.; Peng, C.; Yang, Y.

2016-12-01

A widely accepted core set of leaf traits describes key aspects of plant function including the coupling among carbon, nitrogen and water cycles at the leaf, plant and ecosystem scales. Our current research focuses on two questions: (1) what dimensions of correlated variation among traits apply across all vascular plants irrespective of environment; (2) how, and to what extent, can variations in community mean values of leaf traits be predicted along environmental gradients? Based on a large quantitative trait data set covering the major environmental gradients across China, we are tackling these questions via two complementary approaches: multivariate analysis of trait-trait, trait-site, and trait-environment relationships, and the development of conceptual models and testable hypotheses for the dependencies of each trait on other traits and/or specific environmental predictors. Preliminary multivariate analyses suggest the existence of at least two independent axes of variation in leaf traits, and show robust relationships between trait syndromes and growing-season climate variables. A minimal conceptual model then considers nitrogen per unit leaf area (Narea) as a function of leaf mass per unit area (LMA) and carboxylation capacity (Vcmax); LMA as a function of irradiance, temperature and water and/or nutrient stress; Vcmax as a function of irradiance, temperature and the long-term ci:ca ratio (indexed by δ13C); and the ci:ca ratio as a function of vapour pressure deficit, temperature and atmospheric pressure. Each of these dependencies has support from observations, pointing the way towards a comprehensive set of equations to predict community-mean values of core traits in next-generation terrestrial ecosystem models.

Exploring potential of pearl millet germplasm association panel for association mapping of drought tolerance traits.

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Deepmala Sehgal

Full Text Available A pearl millet inbred germplasm association panel (PMiGAP comprising 250 inbred lines, representative of cultivated germplasm from Africa and Asia, elite improved open-pollinated cultivars, hybrid parental inbreds and inbred mapping population parents, was recently established. This study presents the first report of genetic diversity in PMiGAP and its exploitation for association mapping of drought tolerance traits. For diversity and genetic structure analysis, PMiGAP was genotyped with 37 SSR and CISP markers representing all seven linkage groups. For association analysis, it was phenotyped for yield and yield components and morpho-physiological traits under both well-watered and drought conditions, and genotyped with SNPs and InDels from seventeen genes underlying a major validated drought tolerance (DT QTL. The average gene diversity in PMiGAP was 0.54. The STRUCTURE analysis revealed six subpopulations within PMiGAP. Significant associations were obtained for 22 SNPs and 3 InDels from 13 genes under different treatments. Seven SNPs associations from 5 genes were common under irrigated and one of the drought stress treatments. Most significantly, an important SNP in putative acetyl CoA carboxylase gene showed constitutive association with grain yield, grain harvest index and panicle yield under all treatments. An InDel in putative chlorophyll a/b binding protein gene was significantly associated with both stay-green and grain yield traits under drought stress. This can be used as a functional marker for selecting high yielding genotypes with 'stay green' phenotype under drought stress. The present study identified useful marker-trait associations of important agronomics traits under irrigated and drought stress conditions with genes underlying a major validated DT-QTL in pearl millet. Results suggest that PMiGAP is a useful panel for association mapping. Expression patterns of genes also shed light on some physiological mechanisms underlying

Continuing the Conversation: Development of the U.S. NRC's Definition of Safety Culture and its Traits

International Nuclear Information System (INIS)

Barnes, Valerie; Koves, Ken

2012-01-01

Val Barnes gave a presentation on behalf of the US NRC and INPO. She summarised the work done by the US NRC to develop the US NRC Policy on Safety Culture. Stakeholder representatives were involved in panel sessions to develop a common definition of safety culture and define the traits of a positive safety culture. A survey-based validation study of the eight traits identified through the panel sessions was then conducted across the 63 US nuclear sites by INPO. The INPO study also examined the correlations between the safety culture traits and safety performance. Strong correlations were found for some factors (for example, the number of unplanned scrams correlated strongly with perceptions on management responsibility). The results of the survey supported the inclusion of an additional safety culture trait (questioning attitude) resulting in the following nine traits: - Leadership Safety Values and Actions. - Problem Identification and Resolution. - Personal Accountability. - Work Process. - Continuous Learning. - Environment for Raising Concerns. - Effective Safety Communication. - Respectful Work Environment. - Questioning Attitude. The US NRC has also issued a safety culture policy statement which provides the following definition: 'Nuclear safety culture is the core values and behaviors resulting from a collective commitment by leaders and individuals to emphasize safety over competing goals to ensure protection of people and the environment'. The US NRC and its regulated communities are now working on implementing the policy statement. It was concluded that the work carried out to develop the safety culture policy statement has helped to develop a common language and understanding amongst stakeholders

Theoretical Analysis of Occupational Development Aspects from the Viewpoint of the Personality's Constant Individual Traits Concept

Science.gov (United States)

Wilsz, Jolanta

2015-01-01

The concept of personality's constant individual traits and its significance, as well as implications for problems connected with choosing an occupation have been presented in the paper. Selected theories of occupational development have been analyzed from the concept viewpoint and certain traits of occupational personality presented by authors of…

Incomplete dominance of deleterious alleles contributes substantially to trait variation and heterosis in maize.

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Jinliang Yang

2017-09-01

Full Text Available Deleterious alleles have long been proposed to play an important role in patterning phenotypic variation and are central to commonly held ideas explaining the hybrid vigor observed in the offspring of a cross between two inbred parents. We test these ideas using evolutionary measures of sequence conservation to ask whether incorporating information about putatively deleterious alleles can inform genomic selection (GS models and improve phenotypic prediction. We measured a number of agronomic traits in both the inbred parents and hybrids of an elite maize partial diallel population and re-sequenced the parents of the population. Inbred elite maize lines vary for more than 350,000 putatively deleterious sites, but show a lower burden of such sites than a comparable set of traditional landraces. Our modeling reveals widespread evidence for incomplete dominance at these loci, and supports theoretical models that more damaging variants are usually more recessive. We identify haplotype blocks using an identity-by-decent (IBD analysis and perform genomic prediction analyses in which we weigh blocks on the basis of complementation for segregating putatively deleterious variants. Cross-validation results show that incorporating sequence conservation in genomic selection improves prediction accuracy for grain yield and other fitness-related traits as well as heterosis for those traits. Our results provide empirical support for an important role for incomplete dominance of deleterious alleles in explaining heterosis and demonstrate the utility of incorporating functional annotation in phenotypic prediction and plant breeding.

Incomplete dominance of deleterious alleles contributes substantially to trait variation and heterosis in maize.

Science.gov (United States)

Yang, Jinliang; Mezmouk, Sofiane; Baumgarten, Andy; Buckler, Edward S; Guill, Katherine E; McMullen, Michael D; Mumm, Rita H; Ross-Ibarra, Jeffrey

2017-09-01

Deleterious alleles have long been proposed to play an important role in patterning phenotypic variation and are central to commonly held ideas explaining the hybrid vigor observed in the offspring of a cross between two inbred parents. We test these ideas using evolutionary measures of sequence conservation to ask whether incorporating information about putatively deleterious alleles can inform genomic selection (GS) models and improve phenotypic prediction. We measured a number of agronomic traits in both the inbred parents and hybrids of an elite maize partial diallel population and re-sequenced the parents of the population. Inbred elite maize lines vary for more than 350,000 putatively deleterious sites, but show a lower burden of such sites than a comparable set of traditional landraces. Our modeling reveals widespread evidence for incomplete dominance at these loci, and supports theoretical models that more damaging variants are usually more recessive. We identify haplotype blocks using an identity-by-decent (IBD) analysis and perform genomic prediction analyses in which we weigh blocks on the basis of complementation for segregating putatively deleterious variants. Cross-validation results show that incorporating sequence conservation in genomic selection improves prediction accuracy for grain yield and other fitness-related traits as well as heterosis for those traits. Our results provide empirical support for an important role for incomplete dominance of deleterious alleles in explaining heterosis and demonstrate the utility of incorporating functional annotation in phenotypic prediction and plant breeding.

Land and agronomic potential for biofuel production in Southern Africa

OpenAIRE

von Maltitz, Graham; van der Merwe, Marna

2017-01-01

The Southern African region, from a purely biophysical perspective, has huge potential for biofuel production, especially in Mozambique and Zambia. Although many of the soils are sandy and acidic, with careful management and correct fertilization, they should be highly productive. We suggest that sugarcane is the crop most easily mobilized for biofuel. A number of other crops, such as sweet sorghum, cassava, and tropical sugar beet, have good potential but will need further agronomic and proc...

GENETIC DIVERSITY OF WINTER BREAD WHEAT (Triticum aestivum L. ssp. vulgare

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Sonja Petrović

2011-06-01

Full Text Available Diversity was analyzed based on agronomic and morphologic traits and molecular data. The main objectives of this study were: 1. to estimate genetic diversity of wheat germplasm using agronomic and morphologic traits and molecular markers, 2. to investigate the existence of genetic erosion within tested wheat germplasm, 3. to explore potential utilization of combination of agronomic, morphologic and molecular markers in plant breeding. Forty winter bread wheat varieties were used originating from Croatia, Austria, France, Italy and Russia. Field trial was conducted during two vegetation years (2007/2008, 2008/2009 in three replications according to randomized block design. Ten traits were included in agronomic and morphologic analysis. Composition of high molecular weight glutenin subunits (HMW GS was evaluated for 16 varieties, whereas literature data are used for the rest. Starch composition analysis was based on amylose and amylopectin isolation, their quantity and ratio. For the SSR analysis 26 microsatellite primers were used, and for the AFLP analysis four primer combinations. Statistical analysis was performed using SAS Software 9.1.3, NTSYS ver.2.2., Arlequin ver2.0. and Powermarker ver.3.25. Analyzed varieties displayed highly significant differences (p<0,001 for all agronomic traits and for amylose/amylopectin ratio. High variability of HMW GS was found among varieties. Estimation of genetic diversity based on morphologic and molecular data were used to construct dendograms. AMOVA was used to evaluate variability based on molecular data. Genetic diversity was estimated among and within morphologic and molecular data. SSR and AFLP markers showed efficient discrimination power between highly related genotypes. Significant correlation was found out between two molecular methods which showed more accurate estimate of genetic diversity than by agronomic and morphologic data.

Wheat multiple synthetic derivatives: a new source for heat stress tolerance adaptive traits

Science.gov (United States)

Elbashir, Awad Ahmed Elawad; Gorafi, Yasir Serag Alnor; Tahir, Izzat Sidahmed Ali; Kim, June-Sik; Tsujimoto, Hisashi

2017-01-01

Heat stress is detrimental to wheat (Triticum aestivum L.) productivity. In this study, we aimed to select heat-tolerant plants from a multiple synthetic derivatives (MSD) population and evaluate their agronomic and physiological traits. We selected six tolerant plants from the population with the background of the cultivar ‘Norin 61’ (N61) and established six MNH (MSD population of N61 selected as heat stress-tolerant) lines. We grew these lines with N61 in the field and growth chamber. In the field, we used optimum and late sowings to ensure plant exposure to heat. In the growth chamber, in addition to N61, we used the heat-tolerant cultivars ‘Gelenson’ and ‘Bacanora’. We confirmed that MNH2 and MNH5 lines acquired heat tolerance. These lines had higher photosynthesis and stomata conductance and exhibited no reduction in grain yield and biomass under heat stress compared to N61. We noticed that N61 had relatively good adaptability to heat stress. Our results indicate that the MSD population includes the diversity of Aegilops tauschii and is a promising resource to uncover useful quantitative traits derived from this wild species. Selected lines could be useful for heat stress tolerance breeding. PMID:28744178

Effects of Silicon Fertilization on Agronomic Traits, Yield and Quality of Soybean%硅肥对大豆农艺性状、产量及品质的影响

Institute of Scientific and Technical Information of China (English)

牟英辉; 陈志梁; 程艳波; 年海; 李秀平

2012-01-01

An experiment was carried out in the field to study the effects of Silicon fertilizations on SPAD, leaf area index (LAI) , agronomic traits, yield and qualities of soybean Huaxia No. 3 (Glycine max L. ). The results showed that Silicon could increase soybean LAI,plant height,total pod number, the number of valid pods, 100-seed weight,and decrease invalid pods, plant lodging rate. However,there was no significant difference in leaf SPAD. Compared with CK,the Silicon fertilization increased soybean yield by 11. 97%-32. 56% and soybean protein content by 1. 07%-2. 04% ,but significantly decreased oil content by 1. 68% -3. 61%. The results suggested that Silicon fertilizations with proper quantity can effectively enhance soybean production.%以华夏3号大豆为材料,在大田条件下控制硅肥的施用量,研究硅肥对大豆的叶绿素含量(SPAD值)、叶面积指数(LAI)、农艺性状、产量及品质的影响.结果表明,硅肥能增加大豆叶面积指数(LA1)、株高、总荚数、有效荚数、百粒重,减少无效荚数,降低植株的倒伏率；对大豆倒3叶SPAD值无显著性影响.同时,与对照相比,施用硅肥处理大豆产量显著增加11.97％～32.56％,蛋白质含量增加1.07％ ～2.04％,油分含量显著降低1.68％ ～3.61％.施用硅肥对大豆生产具有很好的促进作用,但在使用过程中要注意用量.

The Mediator Effect of Career Development between Personality Traits and Organizational Commitment: The Example of Sport Communication Technology Talents

Science.gov (United States)

Lo, Hung-Jen; Lin, Chun-Hung; Tung-Hsing, Lin; Tu, Peng-Fei

2014-01-01

This paper explored the relationships among career development, personality trait, and organizational commitment and examines whether career development mediates the relationship between personality trait and organizational commitment. The sample was 275 sport communication technology talents in Taiwan. The instrument included the Personality…

Understanding Arsenic Dynamics in Agronomic Systems to Predict and Prevent Uptake by Crop Plants

Science.gov (United States)

This review is on arsenic in agronomic systems, and covers processes that influence the entry of arsenic into the human food supply. The scope is from sources of arsenic (natural and anthropogenic) in soils, biogeochemical and rhizosphere processes that control arsenic speciatio...

Modifying agricultural crops for improved nutrition.

Science.gov (United States)

McGloughlin, Martina Newell

2010-11-30

The first generation of biotechnology products commercialized were crops focusing largely on input agronomic traits whose value was often opaque to consumers. The coming generations of crop plants can be grouped into four broad areas each presenting what, on the surface, may appear as unique challenges and opportunities. The present and future focus is on continuing improvement of agronomic traits such as yield and abiotic stress resistance in addition to the biotic stress tolerance of the present generation; crop plants as biomass feedstocks for biofuels and "bio-synthetics"; value-added output traits such as improved nutrition and food functionality; and plants as production factories for therapeutics and industrial products. From a consumer perspective, the focus on value-added traits, especially improved nutrition, is undoubtedly one of the areas of greatest interest. From a basic nutrition perspective, there is a clear dichotomy in demonstrated need between different regions and socioeconomic groups, the starkest being inappropriate consumption in the developed world and under-nourishment in Less Developed Countries (LDCs). Dramatic increases in the occurrence of obesity and related ailments in affluent regions are in sharp contrast to chronic malnutrition in many LDCs. Both problems require a modified food supply, and the tools of biotechnology have a part to play. Developing plants with improved traits involves overcoming a variety of technical, regulatory and indeed perception hurdles inherent in perceived and real challenges of complex traits modifications. Continuing improvements in molecular and genomic technologies are contributing to the acceleration of product development to produce plants with the appropriate quality traits for the different regions and needs. Crops with improved traits in the pipeline, the evolving technologies and the opportunities and challenges that lie ahead are covered. Copyright © 2010. Published by Elsevier B.V.

Novel genetic diversity of the alien D-genome synthetic hexaploid wheat (2n=6x=42, Aabbdd) germplasm for various phenology traits

International Nuclear Information System (INIS)

Masood, R.M.; Bibi, K.; Jamil, M.

2016-01-01

The current study evaluates genetic penetrance and expressivity of an alien genome introgression in a set of 117 primary synthetic hexaploid wheat (SHW) accessions. These SHW have originated from durum wheat /accessions with three sets of durum wheat cultivars ALTAR 84, D67.2 and CERCETA as the female and diverse Ae. tauschii accessions as the pollen parents. Diversity of the 12 important traits (Growth habit, pigmentation, chlorophyll content, leaf area index, crop digital ground cover, awn size, awn length, and several seed digital imaging parameters)revealed significant variation for the respective traits, leading to the conclusion that Ae. tauschii accessions have tremendous diversity than the durum controls. Further, the value deviations within each attribute had a range of being lower or higher than their durum wheat female parents and these observations allowed us to use the variations as selective sieves and narrow down the desirable SHW that would be advantageous to exploit for wheat breeding and cultivar improvement programs. Selections were made and a group of 41SHW accessions were identified that will after an intermediate DNA diversity evaluation form a crisper final set for user friendly utilization. The range of selections shows multiple trait advantages for exploitation in both irrigated and rain-fed conditions. This pivotal study sets the foundation to better define the D genome SHW for efficient utilization in future research investigations. Our results have implications in widening the genetic base of hexaploid bread wheat and may facilitate the development of agronomically desirable wheat cultivars. (author)

Agronomic traits and chemical composition of single hybrids of sweet corn Caracteres agronômicos e composição química de híbridos simples de milho doce

Directory of Open Access Journals (Sweden)

Angela Kwiatkowski

2011-12-01

Full Text Available In Brazil, the greengrocery market of sweet corn has been expanding along the country. In contrast, there have been few agri-industries canning sweet corn (Zea mays because of the lack of cultivars with agronomic characteristics proper to industrial purposes. The purpose of this study was to evaluate the general combining ability (GCA of seven inbred lines of sweet corn, and the specific combining ability (SCA of their hybrid combinations based on their agronomic traits, and the chemical composition of the grain. In the growing season 2006/2007, twenty-one single hybrids were evaluated in the Iguatemi Research Station, Maringá County, Northwestern Paraná, in Brazil using a complete randomized block design with four replications. Data were subjected to the analysis of variance and the genotypes were clustered by the Scott-Knott test. We estimated the GCA and SCA effects using the Griffing's method IV with the fixed model for plant height (PH, height of ear (EH, dehusked ears yield (DEY, reducing (RS and total sugars (TS, starch (ST, proteins (PTN, ether extract (EE and fibers (FB. The inbred line L4, which was originated from the 'Doce de Cuba', had the best GCA for crop yield and grain quality and therefore should be used in the next hybrid combinations. The hybrids L4xL5 and L3xL7 were the most promising with regard to crop yield and grain quality.No Brasil, poucas indústrias envazam o milho doce (Zea mays por causa da falta de cultivares para o processamento industrial. Em compensação, o mercado de milho verde doce aumentou. O objetivo deste estudo foi avaliar a capacidade geral de combinação (CGC de sete linhagens de milho doce e da capacidade específica de combinação (CEC das combinações híbridas, com base em características agronômicas e composição química dos grãos. Os vinte e um híbridos simples foram avaliados em blocos casualizados, com quatro repetições, durante o ano agrícola 2006/2007, no distrito de Iguatemi

Genome-wide association study and genetic diversity analysis on nitrogen use efficiency in a Central European winter wheat (Triticum aestivum L. collection.

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István Monostori

Full Text Available To satisfy future demands, the increase of wheat (Triticum aestivum L. yield is inevitable. Simultaneously, maintaining high crop productivity and efficient use of nutrients, especially nitrogen use efficiency (NUE, are essential for sustainable agriculture. NUE and its components are inherently complex and highly influenced by environmental factors, nitrogen management practices and genotypic variation. Therefore, a better understanding of their genetic basis and regulation is fundamental. To investigate NUE-related traits and their genetic and environmental regulation, field trials were evaluated in a Central European wheat collection of 93 cultivars at two nitrogen input levels across three seasons. This elite germplasm collection was genotyped on DArTseq® genotypic platform to identify loci affecting N-related complex agronomic traits. To conduct robust genome-wide association mapping, the genetic diversity, population structure and linkage disequilibrium were examined. Population structure was investigated by various methods and two subpopulations were identified. Their separation is based on the breeding history of the cultivars, while analysis of linkage disequilibrium suggested that selective pressures had acted on genomic regions bearing loci with remarkable agronomic importance. Besides NUE, genetic basis for variation in agronomic traits indirectly affecting NUE and its components, moreover genetic loci underlying response to nitrogen fertilisation were also determined. Altogether, 183 marker-trait associations (MTA were identified spreading over almost the entire genome. We found that most of the MTAs were environmental-dependent. The present study identified several associated markers in those genomic regions where previous reports had found genes or quantitative trait loci influencing the same traits, while most of the MTAs revealed new genomic regions. Our data provides an overview of the allele composition of bread wheat

Using scale and feather traits for module construction provides a functional approach to chicken epidermal development.

Science.gov (United States)

Bao, Weier; Greenwold, Matthew J; Sawyer, Roger H

2017-11-01

Gene co-expression network analysis has been a research method widely used in systematically exploring gene function and interaction. Using the Weighted Gene Co-expression Network Analysis (WGCNA) approach to construct a gene co-expression network using data from a customized 44K microarray transcriptome of chicken epidermal embryogenesis, we have identified two distinct modules that are highly correlated with scale or feather development traits. Signaling pathways related to feather development were enriched in the traditional KEGG pathway analysis and functional terms relating specifically to embryonic epidermal development were also enriched in the Gene Ontology analysis. Significant enrichment annotations were discovered from customized enrichment tools such as Modular Single-Set Enrichment Test (MSET) and Medical Subject Headings (MeSH). Hub genes in both trait-correlated modules showed strong specific functional enrichment toward epidermal development. Also, regulatory elements, such as transcription factors and miRNAs, were targeted in the significant enrichment result. This work highlights the advantage of this methodology for functional prediction of genes not previously associated with scale- and feather trait-related modules.

Unravelling molecular responses to moderate dehydration in harvested fruit of sweet orange (Citrus sinensis L. Osbeck) using a fruit-specific ABA-deficient mutant

OpenAIRE

Romero, Paco; Rodrigo, María J.; Alférez, Fernando; Ballester, Ana-Rosa; González-Candelas, Luis; Zacarías, Lorenzo; Lafuente, María T.

2012-01-01

Water stress affects many agronomic traits that may be regulated by the phytohormone abscisic acid (ABA). Within these traits, loss of fruit quality becomes important in many citrus cultivars that develop peel damage in response to dehydration. To study peel dehydration transcriptional responsiveness in harvested citrus fruit and the putative role of ABA in this process, this study performed a comparative large-scale transcriptional analysis of water-stressed fruits of the wild-type Navelate ...

Lessons From Paired Data From exPVP Maize Lines in Agronomic Field Trials and RGB And Hyperspectral Time-Series Imaging In Controlled Environments

Science.gov (United States)

Schnable, J. C.; Pandey, P.; Ge, Y.; Xu, Y.; Qiu, Y.; Liang, Z.

2017-12-01

Maize Zea mays ssp. mays is one of three crops, along with rice and wheat, responsible for more than 1/2 of all calories consumed around the world. Increasing the yield and stress tolerance of these crops is essential to meet the growing need for food. The cost and speed of plant phenotyping is currently the largest constraint on plant breeding efforts. Datasets linking new types of high throughput phenotyping data collected from plants to the performance of the same genotypes under agronomic conditions across a wide range of environments are essential for developing new statistical approaches and computer vision based tools. A set of maize inbreds and hybrids - primarily recently off patent lines - were phenotyped using a high throughput platform at University of Nebraska-Lincoln. These lines have been previously subjected to high density genotyping, and scored for a core set of 13 phenotypes in field trials across 13 North American states in 2014, 2015, 2016, and 2017. Correlations between image-based measurements and manual measurements demonstrated the feasibility of quantifying variation in plant architecture using image data. However, we demonstrate that naive approaches to measuring traits such as biomass where are developed without integrating genotypic information can introduce nonrandom measurement errors which are confounded with variation between plant accessions. Analysis of hyperspectral image data demonstrated unique signatures from stem tissue which were not identified using aerial imagry. Integrating heritable phenotypes from high-throughput phenotyping data with field data from different environments can reveal previously unknown factors influencing yield plasticity.

PATHOLOGICAL AND MOLECULAR GENETIC STUDIES ON SOME SOYBEAN MUTANTS INDUCED BY GAMMA RAYS IN RELATION TO CHARCOAL ROT DISEASE

International Nuclear Information System (INIS)

ASHRY, N.A.; EL-DEMERDASH, H.M.; ABD EL-RAHMAN, S.S.

2008-01-01

The Egyptian soybean cultivar Giza-22 was used to induce resistant mutants for charcoal rot disease using gamma rays. Sixteen mutants and their parental cultivar were evaluated in M3 generation for their agronomic traits and for resistance to charcoal rot disease. Four mutants showed superiority in their agronomic traits as compared with their parental cultivar. Three mutants were significantly resistant to the disease than their parental cultivar (Giza-22). These three resistant mutants showed non-significant improvement in their agronomic traits as compared with Giza-22 cultivar. DNA extractions from the three resistant mutants and their parent were used to test the differences on the molecular level. Seven random amplified polymorphic DNA (RAPD) primers were used to detect RAPD markers related to charcoal rot resistance in soybean, and to differentiate these mutants. Six RAPD-primers showed molecular markers associated with resistance to charcoal rot in soybean, where five RAPD-primers could differentiate each of the three mutants from each other and from their parental cultivar

Development and Characterization of Somatic Hybrids of Ulva reticulata Forsskål (× Monostroma oxyspermum (Kutz.Doty

Directory of Open Access Journals (Sweden)

Vishal eGupta

2015-01-01

Full Text Available Ulvophycean species with diverse trait characteristics provide an opportunity to create novel allelic recombinant variants. The present study reports the development of seaweed variants with improved agronomic traits through protoplast fusion between Monostroma oxyspermum (Kutz. Doty and Ulva reticulata Forsskål. A total of 12 putative hybrids were screened based on the variations in morphology and total DNA content over the fusion partners. DNA-fingerprinting by inter simple sequence repeat (ISSR and amplified fragment length polymorphism (AFLP analysis confirmed genomic introgression in the hybrids. The DNA fingerprint revealed sharing of parental alleles in regenerated hybrids and a few alleles that were unique to hybrids. The epigenetic variations in hybrids estimated in terms of DNA methylation polymorphism also revealed sharing of methylation loci with both the fusion partners. The functional trait analysis for growth showed a hybrid with heterotic trait (DGR%= 36.7±1.55% over the fusion partners U. reticulata (33.2±2.6% and M. oxyspermum (17.8±1.77%, while others were superior to the mid-parental value (25.2±2.2% (p<0.05. The fatty acid (FA analysis of hybrids showed notable variations over fusion partners. Most hybrids showed increased polyunsaturated FAs (PUFAs compared to saturated FAs (SFAs and mainly includes the nutritionally important linoleic acid, α-linolenic acid, oleic acid, stearidonic acid, and docosahexaenoic acid. The other differences observed include superior cellulose content and antioxidative potential in hybrids over fusion partners. The hybrid varieties with superior traits developed in this study unequivocally demonstrate the significance of protoplast fusion technique in developing improved varients of macroalgae.

Development and Characterization of Somatic Hybrids of Ulva reticulata Forsskål (×) Monostroma oxyspermum (Kutz.)Doty

Science.gov (United States)

Gupta, Vishal; Kumari, Puja; Reddy, CRK

2015-01-01

Ulvophycean species with diverse trait characteristics provide an opportunity to create novel allelic recombinant variants. The present study reports the development of seaweed variants with improved agronomic traits through protoplast fusion between Monostroma oxyspermum (Kutz.) Doty and Ulva reticulata Forsskål. A total of 12 putative hybrids were screened based on the variations in morphology and total DNA content over the fusion partners. DNA-fingerprinting by inter simple sequence repeat (ISSR) and amplified fragment length polymorphism (AFLP) analysis confirmed genomic introgression in the hybrids. The DNA fingerprint revealed sharing of parental alleles in regenerated hybrids and a few alleles that were unique to hybrids. The epigenetic variations in hybrids estimated in terms of DNA methylation polymorphism also revealed sharing of methylation loci with both the fusion partners. The functional trait analysis for growth showed a hybrid with heterotic trait (DGR% = 36.7 ± 1.55%) over the fusion partners U. reticulata (33.2 ± 2.6%) and M. oxyspermum (17.8 ± 1.77%), while others were superior to the mid-parental value (25.2 ± 2.2%) (p < 0.05). The fatty acid (FA) analysis of hybrids showed notable variations over fusion partners. Most hybrids showed increased polyunsaturated FAs (PUFAs) compared to saturated FAs (SFAs) and mainly includes the nutritionally important linoleic acid, α-linolenic acid, oleic acid, stearidonic acid, and docosahexaenoic acid. The other differences observed include superior cellulose content and antioxidative potential in hybrids over fusion partners. The hybrid varieties with superior traits developed in this study unequivocally demonstrate the significance of protoplast fusion technique in developing improved varients of macroalgae. PMID:25688248

GlobAl Distribution of GEnetic Traits (GADGET) web server: polygenic trait scores worldwide.

Science.gov (United States)

Chande, Aroon T; Wang, Lu; Rishishwar, Lavanya; Conley, Andrew B; Norris, Emily T; Valderrama-Aguirre, Augusto; Jordan, I King

2018-05-18

Human populations from around the world show striking phenotypic variation across a wide variety of traits. Genome-wide association studies (GWAS) are used to uncover genetic variants that influence the expression of heritable human traits; accordingly, population-specific distributions of GWAS-implicated variants may shed light on the genetic basis of human phenotypic diversity. With this in mind, we developed the GlobAl Distribution of GEnetic Traits web server (GADGET http://gadget.biosci.gatech.edu). The GADGET web server provides users with a dynamic visual platform for exploring the relationship between worldwide genetic diversity and the genetic architecture underlying numerous human phenotypes. GADGET integrates trait-implicated single nucleotide polymorphisms (SNPs) from GWAS, with population genetic data from the 1000 Genomes Project, to calculate genome-wide polygenic trait scores (PTS) for 818 phenotypes in 2504 individual genomes. Population-specific distributions of PTS are shown for 26 human populations across 5 continental population groups, with traits ordered based on the extent of variation observed among populations. Users of GADGET can also upload custom trait SNP sets to visualize global PTS distributions for their own traits of interest.

Personality Traits in Huntington's Disease

DEFF Research Database (Denmark)

Larsen, Ida Unmack; Mortensen, Erik Lykke; Vinther-Jensen, Tua

2016-01-01

Huntington's disease (HD) is associated with risk for developing psychiatric symptoms. Vulnerability or resilience to psychiatric symptoms may be associated with personality traits. This exploratory study, aimed to investigate personality traits in a large cohort of HD carriers and at risk gene......-expansion negative individuals (HD non-carriers), exploring whether carrying the HD gene or growing up in an HD family influences personality traits. Forty-seven HD carriers, Thirty-nine HD non-carriers, and 121 healthy controls answered the Danish version of the revised NEO personality inventory. Comparisons...... symptoms. Our findings suggest that, there is no direct effect of the HD gene on personality traits, but that personality assessment may be relevant to use when identifying individuals from HD families who are vulnerable to develop psychiatric symptoms....

Agronomic and molecular evaluation of induced mutant rice (oryza sativa l.) lines in Egypt

International Nuclear Information System (INIS)

Sshehzad, T.; Allah, A.; Aallah, E.A.; Ammar, M.H.; Abdelkhalik, A.H.

2011-01-01

The present study was conducted at the farm of the Rice Research and Training Center, Sakha, Kafr El-Sheikh, Egypt, during 2000-2007 rice sowing seasons. Five rice varieties viz., Giza 171, Giza 175, Giza 176, Giza 181 and GZ 1368 were the most widely grown Japonica and Indica types in Egypt during the last period, possesses at that time many positive agronomic characteristics including wide adaptability, high yield potential, tolerance to stresses and good eating quality. But with the passage of time it has lost its vigor. In Rice Research Program, Egypt, dry seeds of the above mentioned varieties were treated with different doses of gamma rays (100, 200, 300, 400, and 500 Gy) for raising M1 generation. M1 plants were established by transplanting in the year 2000 season. One hundred independent lines have been advanced to M5 generation enabling evaluation of quantitative traits by replicated trials and promising lines were selected and tested in multi-location trials as M6, M7 and M8 generations. Morphological variations at vegetative and reproductive stages including plant type and various physiological characters were observed in the five populations. The mutant lines characteristics consisted of better resistance to lodging, blast disease, high yield potential, as well as early maturity. Results from yield trials and molecular assessments indicated that the mutants differed genetically from their parents. So, these mutants could be used as a donor parents in rice breeding program and some of them can be recommended as new rice varieties suitable for rice belt in Egypt. (author)

Development of TGMS lines with improved floral traits through mutation breeding in rice

International Nuclear Information System (INIS)

Thiyagarajan, K.; Abirami, S.; Robin, S.; Manonmani, S.; Jambhulkar, S.J.

2006-01-01

Mutation breeding is now accepted as an useful means of adding valuable attributes to a variety. Plant breeders have used this tool for the improvement of some cultivated crop varieties. The current investigation is aimed to develop mutants with respect to temperature sensitivity and good floral traits for use in two line breeding. The putative Thermosensitive Genic Male Sterile lines viz,, TS 6 and CBTS 0282 were subjected to induce mutagenesis with gamma rays (300 and 350 Gy) and EMS (0.5 and 0.6%) for developing new TGMS lines with desirable floral traits. The seeds treated with gamma ray and EMS were raised in M1 generation and seeds collected from this population were raised in M2 generation as plant to progeny rows for screening the best TGMS lines with desirable floral traits. In the M2 generation a total of 469 progeny rows of CBTS 0282 and 854 progeny rows of TS 6 were raised. A population of 128, 975 plants in CBTS 0282 and 1,28,100 plants in TS 6 were raised. In M2 generation 361 sterile, uniform stable individual plants with good stigma exertion percentage and wide angle of glume opening were selected and stubble planted at HREC, Gudalur, a low temperature region. At HREC, again the same screening process was carried out and 13 stubbles with excellent stigma exertion percentage were selected and their progenies were raised in M3 generation along with control and check IR 58025 A. A total of 63 sterile and stable M3 plants with good stigma exertion percentage wider angle of glume opening excelling over the check and control were identified and raised in M4 generation along with control and check IR 58025 A. In the M4 generation a total of 16 progeny rows were found to be uniform and homozygous with good floral traits. These lines can be utilized for developing new two line hybrids

Trait Perception Accuracy and Acquaintance Within Groups: Tracking Accuracy Development.

Science.gov (United States)

Brown, Jill A; Bernieri, Frank

2017-05-01

Previous work on trait perception has evaluated accuracy at discrete stages of relationships (e.g., strangers, best friends). A relatively limited body of literature has investigated changes in accuracy as acquaintance within a dyad or group increases. Small groups of initially unacquainted individuals spent more than 30 hr participating in a wide range of activities designed to represent common interpersonal contexts (e.g., eating, traveling). We calculated how accurately each participant judged others in their group on the big five traits across three distinct points within the acquaintance process: zero acquaintance, after a getting-to-know-you conversation, and after 10 weeks of interaction and activity. Judgments of all five traits exhibited accuracy above chance levels after 10 weeks. An examination of the trait rating stability revealed that much of the revision in judgments occurred not over the course of the 10-week relationship as suspected, but between zero acquaintance and the getting-to-know-you conversation.

Detection of duplicates among repatriated Nordic spring barley (Hordeum vulgare L. s.l.) accessions using agronomic and morphological descriptors and microsatellite markers

DEFF Research Database (Denmark)

Lund, Birgitte; Ortiz, Rodomiro; von Bothmer, Roland

2013-01-01

on agronomic and morphological discriminators to detect genetic heterogeneity, although with reduced sensitivity compared with microsatellite markers. These results also suggest that grouping ensuing from either approach could reflect distinct patterns of diversity (due to different mutation rates...... their use with results from previous research with microsatellite markers. These accessions were initially grouped into 36 potential duplicates according to passport data but further analysis with microsatellites reduce them to 22 genetically homogeneous groups. The analysis with 26 agronomic...... and morphological descriptors of putative Nordic spring barley accessions from nine gene banks was compared with a previous study with microsatellites. Each agronomic and morphological descriptor was weighed relative to its genetic determination with the aim of reducing the effect of environmental errors on genetic...

Characteristic, inheritance and breeding application of rice mutants with greenable albino leaf

International Nuclear Information System (INIS)

Fang Xiantao; Ma Hongli; Zhao Fuyuan; Zhang Qingqi; Zhang Shubiao

2009-01-01

Inheritance and main agronomic traits of photo-thermo-sensitive genic male sterile line with green-revertible albino leaf were investigated. The results indicated that the mutants might be divided into three types: albino regreening type (W2, W3, W4 and W10), albino to kelly type (W9) and abino-regreening-albino-regreening type (W1 and W7). Genetic study indicated that green-revertible albino leaf color trait of the mutants as controlled by a single recessive gene. These mutants had similar agronomic traits and fertility characteristics to the corresponding male sterile line 'Peiai 64S'. The hybrids of these mutants had similar characteristics with original-hybrids in plant type, developing of tillers and plant height. The yield components of the mutant hybrids were different depending on different mutants. The yield potential of hybrids of W1, W2 and W3 were similar to the original-hybrid. The results also indicated that W1, W2 and W3 had breeding application value. (authors)

Sequential Path Analysis for Determination of Relationship Between Yield and Yield Components in Bread Wheat (Triticum aestivum.L.

Directory of Open Access Journals (Sweden)

Mohtasham MOHAMMADI

2014-03-01

Full Text Available An experiment was conducted to evaluate 295 wheat genotypes in Alpha-Lattice design with two replications. The arithmetic mean and standard deviation of grain yield was 2706 and 950 (kg/ha,respectively. The results of correlation coefficients indicated that grain yield had significant and positive association with plant height, spike length, early growth vigor and agronomic score. Whereas there were negative correlation coefficients between grain yield and days to physiological maturity and canopy temperature before and during anthesis. Path analysis indicated agronomic score and plant height had high positive direct effects on grain yield, while canopy temperature before and during anthesis, and days to maturity, wes another trait having negative direct effect on grain yield. The results of sequential path analysis showed the traits that accounted as a criteria variable for high grain yield were agronomic score, plant height, canopy temperature, spike length, chlorophyll content and early growth vigor, which were determined as first, second and third order variables and had strong effects on grain yield via one or more paths. More important, as canopy temperature, agronomic score and early growth vigor can be evaluated quickly and easily, these traits may be used for evaluation of large populations.

Microsatellites and agronomic traits for assessing genetic ...

African Journals Online (AJOL)

GRACE

2006-05-16

May 16, 2006 ... genetic relationships among 18 New Rice for Africa. (NERICA) varieties .... but two other modifications were later included as described in the discussion ..... markers and their application in wheat breeding: a review. Plant.

Agronomic-productive characteristics of two genotype of stevia rebaudiana in Central Italy

OpenAIRE

Laura Andolfi; Mario Macchia; Lucia Ceccarini

2006-01-01

Stevia rebaudiana Bertoni produces a variety of high-potency low calorie sweeteners in its’ leaf tissue. The aim of this work was to evaluate the productive potential of two different Stevia rebaudiana genotypes and the characteristics of the production of the plant obtained through different cultivation methods, in central Italy. For several years (1992-2000) agronomic trials on Stevia rebaudiana cultivated in the littoral area near Pisa (Italy) carried out. In 1992 two different g...

Trait-based model development to support breeding programs. A case study for salt tolerance and rice.

Science.gov (United States)

Paleari, Livia; Movedi, Ermes; Confalonieri, Roberto

2017-06-28

Eco-physiological models are increasingly used to analyze G × E × M interactions to support breeding programs via the design of ideotypes for specific contexts. However, available crop models are only partly suitable for this purpose, since they often lack clear relationships between parameters and traits breeders are working on. Taking salt stress tolerance and rice as a case study, we propose a paradigm shift towards the building of ideotyping-specific models explicitly around traits involved in breeding programs. Salt tolerance is a complex trait relying on different physiological processes that can be alternatively selected to improve the overall crop tolerance. We developed a new model explicitly accounting for these traits and we evaluated its performance using data from growth chamber experiments (e.g., R 2 ranged from 0.74 to 0.94 for the biomass of different plant organs). Using the model, we were able to show how an increase in the overall tolerance can derive from completely different physiological mechanisms according to soil/water salinity dynamics. The study demonstrated that a trait-based approach can increase the usefulness of mathematical models for supporting breeding programs.

Evaluation of pea varieties based on correlation of quantitative traits and indices

Directory of Open Access Journals (Sweden)

О. І. Присяжнюк

2016-12-01

Full Text Available Purpose. To evaluate pea plants productivity and determine the degree of correlation among the main agronomic characters in pea varieties. Methods. Structural and statistical analysis. Results. Evaluation of pea samples in terms of indices of plant productivity elements level based on correlation analysis and single-factor indices appliance provided insight into the ratio of one trait share per unit of another one. It was defined that some correlations among the elements of productivity was not only moderate and weak, but they also changed their sign that could be the evidence of growth conditions influence on structural relationships bet­ween some traits and, consequently, redistribution of their contributions to the formation of variety productivity. Positive and very close relationship of many traits was revealed, particularly between plant height and the height of the plant up to the first bean, the number of nodes and the number of sterile nodes (r = 0,95–0,97. Methodological aspects of the variety model creation were considered, that may be useful not only in pea breeding but also for improving the techno­logy of its cultivation. Conclusions. Correlation relationships were established between the number of beans and the number of fruiting nodes and the number of carpophores containing 2 beans (r = 0,86–0,88, seed mass and plant mass (r = 0,81, the number of seeds per plant and plant mass and seed mass per plant (r = 0,78–0,81, the number of certified seeds and the number of seeds per plant (r = 0,84, the average number of beans per fertile node and the number of carpophores containing 2 beans (r = 0,74 that makes it possible to use them in assessing the productivity of plants.

Towards a reference plant trait ontology for modeling knowledge of plant traits and phenotypes

Science.gov (United States)

Ontology engineering and knowledge modeling for the plant sciences is expected to contribute to the understanding of the basis of plant traits that determine phenotypic expression in a given environment. Several crop- or clade-specific plant trait ontologies have been developed to describe plant tr...

Structural and Temporal Variation in Genetic Diversity of European Spring Two-Row Barley Cultivars and Association Mapping of Quantitative Traits

Directory of Open Access Journals (Sweden)

Alessandro Tondelli

2013-07-01

Full Text Available Two hundred sixteen barley ( L. cultivars were selected to represent the diversity and history of European spring two-row barley breeding and to search for alleles controlling agronomic traits by association genetics. The germplasm was genotyped with 7864 gene-based single nucleotide polymorphism markers and corresponding field trial trait data relating to growth and straw strength were obtained at multiple European sites. Analysis of the marker data by statistical population genetics approaches revealed two important trends in the genetic diversity of European two-row spring barley, namely, i directional selection for approximately 14% of total genetic variation of the population in the last approximately 50 yr and ii highly uneven genomic distribution of genetic diversity. Association analysis of the phenotypic and genotypic data identified multiple loci affecting the traits investigated, some of which co-map with selected regions. Collectively, these data show that the genetic makeup of European two-row spring barley is evolving under breeder selection, with signs of extinction of diversity in some genomic regions, suggesting that “breeding the best with the best” is leading towards fixation of some breeder targets. Nevertheless, modern germplasm also retains many regions of high diversity, suggesting that site-specific genetic approaches for allele identification and crop improvement such as association genetics are likely to be successful.

A highly concentrated diet increases biogas production and the agronomic value of young bull's manure.

Science.gov (United States)

Mendonça Costa, Mônica Sarolli Silva de; Lucas, Jorge de; Mendonça Costa, Luiz Antonio de; Orrico, Ana Carolina Amorim

2016-02-01

The increasing demand for animal protein has driven significant changes in cattle breeding systems, mainly in feedlots, with the use of young bulls fed on diets richer in concentrate (C) than in forage (F). These changes are likely to affect animal manure, demanding re-evaluation of the biogas production per kg of TS and VS added, as well as of its agronomic value as a biofertilizer, after anaerobic digestion. Here, we determined the biogas production and agronomic value (i.e., the macronutrient concentration in the final biofertilizer) of the manure of young bulls fed on diets with more (80% C+20% F; 'HighC' diet) or less (65% C+35% F; 'LowC' diet) concentrate, evaluating the effects of temperature (25, 35, and 40°C) and the use of an inoculum, during anaerobic digestion. A total of 24 benchtop reactors were used, operating in a semi-continuous system, with a 40-day hydraulic retention time (HRT). The manure from animals given the HighC diet had the greatest potential for biogas production, when digested with the use of an inoculum and at 35 or 40°C (0.6326 and 0.6207m(3)biogas/kg volatile solids, or VS, respectively). We observed the highest levels of the macronutrients N, P, and K in the biofertilizer from the manure of animals given HighC. Our results show that the manure of young bulls achieves its highest potential for biogas production and agronomic value when animals are fed diets richer in concentrate, and that biogas production increases if digestion is performed at higher temperatures, and with the use of an inoculum. Copyright © 2015 Elsevier Ltd. All rights reserved.

Fear inhibition in high trait anxiety.

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Merel Kindt

Full Text Available Trait anxiety is recognized as an individual risk factor for the development of anxiety disorders but the neurobiological mechanisms remain unknown. Here we test whether trait anxiety is associated with impaired fear inhibition utilizing the AX+/BX- conditional discrimination procedure that allows for the independent evaluation of startle fear potentiation and inhibition of fear. Sixty undergraduate students participated in the study--High Trait Anxious: n = 28 and Low Trait Anxious: n = 32. We replicated earlier findings that a transfer of conditioned inhibition for startle responses requires contingency awareness. However, contrary to the fear inhibition hypothesis, our data suggest that high trait anxious individuals show a normal fear inhibition of conditioned startle responding. Only at the cognitive level the high trait anxious individuals showed evidence for impaired inhibitory learning of the threat cue. Together with other findings where impaired fear inhibition was only observed in those PTSD patients who were either high on hyperarousal symptoms or with current anxiety symptoms, we question whether impaired fear inhibition is a biomarker for the development of anxiety disorders.

Development of new iraqi wheat varieties induced by gamma rays

International Nuclear Information System (INIS)

Ibrahim, I.F.; Al-Janabi, K.K.; Al-Maaroof, E.M.; Al-Aubaidi, M.O.; Mahmoud, A.H.; Al-Janabi, A.A.

1991-01-01

The aim of the present investigation is to study agronomic traits of three wheat mutants induced by gamma rays and compared with their origin 'Saber Beg' during M 8 - M 11 generations. These mutants showed a moderate resistance to leaf rust and lodging, while the origin was susceptible. Also, these mutants surpassed their origin in seed weight of 100 spikes, weight of 1000 kernels and protein yield per unit area. Chemical and physical analyses of mutant flours indicated that it could be used for bread making successfully.2 fig.,4 tab

The Development and Preliminary Validation of a Brief Questionnaire of Psychopathic Personality Traits

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Sonja Etzler

2017-09-01

Full Text Available The measurement of psychopathic personality traits via self-report has become an important tool in legal psychology. One prominent instrument is the Psychopathic Personality Inventory (PPI; Lilienfeld and Andrews, 1996, a well-validated questionnaire that is widely applied in many countries. In Germany, it is the only questionnaire assessing psychopathic traits that is available from a publisher with a manual edited for easy administration. Nevertheless, the PPI shows certain shortcomings: the high number of 154 items makes it less economic, it was developed on a non-representative undergraduate sample, and studies revealed an inconsistent factor structure. To overcome these points, a new questionnaire, the Questionnaire of Psychopathic Personality Traits [German: Fragebogen Psychopathischer Persönlichkeitseigenschaften (FPP] was developed. The sample consists of n = 132 civilians (56% female and n = 173 inmates of German correctional facilities (30% female. The FPP comprises 30 items, whose wording was short and adequate for inmates. It shows satisfying psychometric properties regarding factorial structure, item properties, and reliability. Partial invariance regarding both subsamples allows for interpretation of latent means. Results supported validity such as associations with self-reported crime, and inmates’ misconduct. The factorial structure was cross-validated on a second sample of N = 517 participants (71% female from an online study. The FPP is useful in large-scale research studies as well as for clinical settings, e.g., for treatment planning in correctional facilities.

Genetic Loci Governing Grain Yield and Root Development under Variable Rice Cultivation Conditions

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Margaret Catolos

2017-10-01

Full Text Available Drought is the major abiotic stress to rice grain yield under unpredictable changing climatic scenarios. The widely grown, high yielding but drought susceptible rice varieties need to be improved by unraveling the genomic regions controlling traits enhancing drought tolerance. The present study was conducted with the aim to identify quantitative trait loci (QTLs for grain yield and root development traits under irrigated non-stress and reproductive-stage drought stress in both lowland and upland situations. A mapping population consisting of 480 lines derived from a cross between Dular (drought-tolerant and IR64-21 (drought susceptible was used. QTL analysis revealed three major consistent-effect QTLs for grain yield (qDTY1.1, qDTY1.3, and qDTY8.1 under non-stress and reproductive-stage drought stress conditions, and 2 QTLs for root traits (qRT9.1 for root-growth angle and qRT5.1 for multiple root traits, i.e., seedling-stage root length, root dry weight and crown root number. The genetic locus qDTY1.1 was identified as hotspot for grain yield and yield-related agronomic and root traits. The study identified significant positive correlations among numbers of crown roots and mesocotyl length at the seedling stage and root length and root dry weight at depth at later stages with grain yield and yield-related traits. Under reproductive stage drought stress, the grain yield advantage of the lines with QTLs ranged from 24.1 to 108.9% under upland and 3.0–22.7% under lowland conditions over the lines without QTLs. The lines with QTL combinations qDTY1.3+qDTY8.1 showed the highest mean grain yield advantage followed by lines having qDTY1.1+qDTY8.1 and qDTY1.1+qDTY8.1+qDTY1.3, across upland/lowland reproductive-stage drought stress. The identified QTLs for root traits, mesocotyl length, grain yield and yield-related traits can be immediately deployed in marker-assisted breeding to develop drought tolerant high yielding rice varieties.

Agronomic aspects of strip intercropping lettuce with alyssum for biological control of aphids

OpenAIRE

Brennan, Eric B.

2013-01-01

Organic lettuce growers in California typically use insectary strips of alyssum (Lobularia maritima (L.) Desv.) to attract hoverflies (Syrphidae) that provide biological control of aphids. A two year study with transplanted organic romaine lettuce in Salinas, California investigated agronomic aspects of lettuce monoculture and lettuce-alyssum strip intercropping on beds in replacement intercropping treatments where alyssum transplants replaced 2 to 8% of the lettuce transplants, and in additi...

Agronomic and environmental studies of potato (Solanum tuberosum L.) and analysis of its value chain in Zimbabwe

NARCIS (Netherlands)

Svubure, O.

2015-01-01

Keywords: Irish potato, food security, stakeholder analysis, sustainability indicators, Cool Farm Tool-Potato, yield gap, resource use efficiency, LINTUL-POTATO model, Zimbabwe.

Oniward Svubure (2015). Agronomic and environmental studies of potato (Solanum