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Sample records for adapted fish chionodraco

  1. Anion and sulfonamide inhibition studies of an α-carbonic anhydrase from the Antarctic hemoglobinless fish Chionodraco hamatus.

    Cincinelli, Alessandra; Martellini, Tania; Vullo, Daniela; Supuran, Claudiu T

    2015-12-01

    An α-carbonic anhydrase (CA, EC 4.2.1.1) has been purified from the Antarctic hemoglobinless fish Chionodraco hamatus (icefish). The new enzyme, denominated ChaCA, has a good catalytic activity for the physiologic CO2 hydration to bicarbonate reaction, similar to that of the low activity human isoform hCA I, with a kcat of 5.3×10(5) s(-1), and a kcat/Km of 3.7×10(7) M(-1) s(-1). The enzyme was inhibited in the submillimolar range by most inorganic anions (cyanate, thiocyanate, cyanide, bicarbonate, halides), whereas sulfamide, sulfamate, phenylboronic/phenylarsonic acids were micromolar inhibitors, with KIs in the range of 9-77 μM. Many clinically used drugs, such as acetazolamide, methazolamide, dorzolamide, brinzolamide, topiramate and benzolamide were low nanomolar inhibitors, with KIs in the range of 39.1-77.6 nM. As the physiology of CO2/bicarbonate transport or the Root effect in this Antarctic fish are poorly understood at this moment, such inhibition data may give a more detailed insight in the role that CAs play in these phenomena, by the use of inhibitors described here as physiologic tools. PMID:26525863

  2. Laser microdissection-based analysis of the Y sex chromosome of the Antarctic fish Chionodraco hamatus (Notothenioidei, Channichthyidae

    Ennio Cocca

    2015-02-01

    Full Text Available Microdissection, DOP-PCR amplification and microcloning were used to study the large Y chromosome of Chionodraco hamatus, an Antarctic fish belonging to the Notothenioidei, the dominant component of the Southern Ocean fauna. The species has evolved a multiple sex chromosome system with digametic males showing an X1YX2 karyotype and females an X1X1X2X2 karyotype. Fluorescence in situ hybridization, performed with a painting probe made from microdissected Y chromosomes, allowed a deeper insight on the chromosomal rearrangement, which underpinned the fusion event that generated the Y. Then, we used a DNA library established by microdissection and microcloning of the whole Y chromosome of Ch. hamatus for searching sex-linked sequences. One clone provided preliminary information on the presence on the Y chromosome of the CHD1 gene homologue, which is sex-linked in birds but in no other vertebrates. Several clones from the Y-chromosome mini-library contained microsatellites and transposable elements, one of which mapped to the q arm putative fusion region of the Y chromosome. The findings confirm that interspersed repetitive sequences might have fostered chromosome rearrangements and the emergence of the Y chromosome in Ch. hamatus. Detection of the CHD1 gene in the Y sex-determining region could be a classical example of convergent evolution in action.

  3. Morphological and biochemical analyses of otoliths of the ice-fish Chionodraco hamatus confirm a common origin with red-blooded species.

    Motta, Chiara Maria; Avallone, Bice; Balassone, Giuseppina; Balsamo, Giuseppe; Fascio, Umberto; Simoniello, Palma; Tammaro, Stefania; Marmo, Francesco

    2009-01-01

    The morphology and composition of the three otoliths of the Antarctic ice-fish Chionodraco hamatus were studied by scanning electron microscopy and X-ray diffraction. The composition of the sagitta, lapillus and asteriscus protein matrices was also analysed by sodium dodecyl sulphate-polyacrylamide gel electrophoresis, western blots and confocal laser scanning microscopy to reveal the presence of and to localize the calcium-binding proteins calmodulin, calbindin and S-100. Morphological results indicated that the otoliths in this ice-fish were similar to those of Trematomus bernacchii, a red-blooded Antarctic species [B. Avallone et al. (2003) J. Submicrosc. Cytol. Pathol. 35, 69-76], but rather different from those of other teleosts. These two Antarctic species possessed a completely vateritic asteriscus, whereas their sagitta and lapillus were made mostly of aragonite. Parallel analysis of protein patterns in C. hamatus and T. bernacchii revealed that the sagitta significantly differed from the lapillus and asteriscus in both species. The sagitta did not contain the S-100 protein and showed calmodulin and calbindin located in discontinuous or incremental zones, respectively. These results demonstrate that the otoliths of C. hamatus and T. bernacchii share more resemblances than differences and support the idea of a common origin of these species. PMID:19166478

  4. Homeowiscous adaptation in fish

    Flipiak, Anna; Gondko, Roman; Gabryelak, Teresa

    1997-01-01

    Homeowiscous adaptation is a common phenomenon observed in poikilotherms which remain active at different temperatures. It is usually caused by changes in fatty acids pool in cellular membranes, what enable to maintain the physical structure of their membranes within tolerable limits. The increased unsaturaition of membrane lipids has as its basis some changes in activity of the appropriate enzymes. Fluctuations in fluidity of membrame lipids activate transcription of the genes...

  5. Population structure and adaptation in fishes

    Limborg, Morten

    Marine fishes represent a valuable resource for the global economy and food consumption. Accordingly, many species experience high levels of exploitation necessitating effective management plans. However, long term sustainability may be jeopardized from insufficient knowledge about intra-specific......Marine fishes represent a valuable resource for the global economy and food consumption. Accordingly, many species experience high levels of exploitation necessitating effective management plans. However, long term sustainability may be jeopardized from insufficient knowledge about intra......-specific population structure and adaptive divergence. The large population sizes and high migration rates common to most marine fishes impede the differentiating effect of genetic drift, having led to expectations of no population structure and that the occurrence of local adaptation should be rare in these species...... glacial time scales and more recent colonisation of new habitats. Further, strong genetic divergence at several regional scales demonstrated limited connectivity among sea-going and local fjord populations along the Norwegian coast as well as indications for the potential of locally adapted populations in...

  6. Adaptive myelination from fish to man.

    Baraban, Marion; Mensch, Sigrid; Lyons, David A

    2016-06-15

    Myelinated axons with nodes of Ranvier are an evolutionary elaboration common to essentially all jawed vertebrates. Myelin made by Schwann cells in our peripheral nervous system and oligodendrocytes in our central nervous system has been long known to facilitate rapid energy efficient nerve impulse propagation. However, it is now also clear, particularly in the central nervous system, that myelin is not a simple static insulator but that it is dynamically regulated throughout development and life. New myelin sheaths can be made by newly differentiating oligodendrocytes, and mature myelin sheaths can be stimulated to grow again in the adult. Furthermore, numerous studies in models from fish to man indicate that neuronal activity can affect distinct stages of oligodendrocyte development and the process of myelination itself. This begs questions as to how these effects of activity are mediated at a cellular and molecular level and whether activity-driven adaptive myelination is a feature common to all myelinated axons, or indeed all oligodendrocytes, or is specific to cells or circuits with particular functions. Here we review the recent literature on this topic, elaborate on the key outstanding questions in the field, and look forward to future studies that incorporate investigations in systems from fish to man that will provide further insight into this fundamental aspect of nervous system plasticity. This article is part of a Special Issue entitled SI: Myelin Evolution. PMID:26498877

  7. Exploring novel hormones essential for seawater adaptation in teleost fish.

    Takei, Yoshio

    2008-05-15

    Marine fish are dehydrated in hyperosmotic seawater (SW), but maintain water balance by drinking surrounding SW if they are capable of excreting the excess ions, particularly Na(+) and Cl(-), absorbed with water by the intestine. An integrative approach is essential for understanding the mechanisms for SW adaptation, in which hormones play pivotal roles. Comparative genomic analyses have shown that hormones that have Na(+)-extruding and vasodepressor properties are greatly diversified in teleost fish. Physiological studies at molecular to organismal levels have revealed that these diversified hormones are much more potent and efficacious in teleost fish than in mammals and are important for survival in SW and for maintenance of low arterial pressure in a gravity-free aquatic environment. This is typified by the natriuretic peptide (NP) family, which is diversified into seven members (ANP, BNP, VNP and CNP1, 2, 3 and 4) and exerts potent hyponatremic and vasodepressor actions in marine fish. Another example is the guanylin family, which consists of three paralogs (guanylin, uroguanylin and renoguanylin), and stimulates Cl(-) secretion into the intestinal lumen and activates the absorptive-type Na-K-2Cl cotransporter by local luminocrine actions. The most recent addition is the adrenomedullin (AM) family, which has five members (AM1, 2, 3, 4 and 5), with AM2 and AM5 showing the most potent or efficacious vasodepressor and osmoregulatory effects among known hormones in teleost fish. Accumulating evidence strongly indicates that members of these diversified hormone families play essential roles in SW adaptation in teleost fish. In this short review, the author has attempted to propose a novel approach for identification of new hormones that are important for SW adaptation using comparative genomic and functional studies. The author has also suggested potential hormone families that are diversified in teleost fish and appear to be involved in SW adaptation through their

  8. The genomic substrate for adaptive radiation in African cichlid fish

    Brawand, David; Russell, Pamela

    2014-01-01

    Cichlid fishes are famous for large, diverse and replicated adaptive radiations in the Great Lakes of East Africa. To understand the molecular mechanisms underlying cichlid phenotypic diversity, we sequenced the genomes and transcriptomes of five lineages of African cichlids: the Nile tilapia (Oreochromis niloticus), an ancestral lineage with low diversity; and four members of the East African lineage: Neolamprologus brichardi/pulcher (older radiation, Lake Tanganyika), Metriaclima zebra (rec...

  9. Changes in adaptive capacity of Kenyan fishing communities

    Cinner, Joshua E.; Huchery, Cindy; Hicks, Christina C.; Daw, Tim M.; Marshall, Nadine; Wamukota, Andrew; Allison, Edward H.

    2015-09-01

    Coastal communities are particularly at risk from the impacts of a changing climate. Building the capacity of coastal communities to cope with and recover from a changing environment is a critical means to reducing their vulnerability. Yet, few studies have quantitatively examined adaptive capacity in such communities. Here, we build on an emerging body of research examining adaptive capacity in natural resource-dependent communities in two important ways. We examine how nine indicators of adaptive capacity vary: among segments of Kenyan fishing communities; and over time. Socially disaggregated analyses found that the young, those who had migrated, and those who do not participate in decision-making seemed least prepared for adapting to change in these resource-dependent communities. These results highlight the most vulnerable segments of society when it comes to preparing for and adapting to change in resource-dependent communities. Comparisons through time showed that aspects of adaptive capacity seemed to have increased between 2008 and 2012 owing to higher observed community infrastructure and perceived availability of credit.

  10. 77 FR 2996 - National Fish, Wildlife, and Plants Climate Adaptation Strategy

    2012-01-20

    ... the Strategy in a May 24, 2011, notice of intent in the Federal Register (76 FR 30193). After we... Fish and Wildlife Service National Fish, Wildlife, and Plants Climate Adaptation Strategy AGENCY: Fish..., Wildlife, and Plants Climate Adaptation Strategy (Strategy). The purpose of the Strategy will be to...

  11. Mudskipper genomes provide insights into the terrestrial adaptation of amphibious fishes

    You, Xinxin; Bian, Chao; Zan, Qijie; Xu, Xun; Liu, Xin; Chen, Jieming; Wang, Jintu; Qiu, Ying; Li, Wujiao; Zhang, Xinhui; Sun, Ying; Chen, Shixi; Hong, Wanshu; Li, Yuxiang; Cheng, Shifeng; Fan, Guangyi; Shi, Chengcheng; Liang, Jie; Tom Tang, Y; Yang, Chengye; Ruan, Zhiqiang; Bai, Jie; Peng, Chao; Mu, Qian; Lu, Jun; Fan, Mingjun; Yang, Shuang; Huang, Zhiyong; Jiang, Xuanting; Fang, Xiaodong; Zhang, Guojie; Zhang, Yong; Polgar, Gianluca; Yu, Hui; Li, Jia; Liu, Zhongjian; Zhang, Guoqiang; Ravi, Vydianathan; Coon, Steven L; Wang, Jian; Yang, Huanming; Venkatesh, Byrappa; Wang, Jun; Shi, Qiong

    2014-01-01

    Mudskippers are amphibious fishes that have developed morphological and physiological adaptations to match their unique lifestyles. Here we perform whole-genome sequencing of four representative mudskippers to elucidate the molecular mechanisms underlying these adaptations. We discover an expansi...

  12. Fisheries-induced neutral and adaptive evolution in exploited fish populations and consequences for their adaptive potential

    Marty, Lise; Dieckmann, Ulf; Ernande, Bruno

    2015-01-01

    Fishing may induce neutral and adaptive evolution affecting life-history traits, and molecular evidence has shown that neutral genetic diversity has declined in some exploited populations. Here, we theoretically study the interplay between neutral and adaptive evolution caused by fishing. An...... individual-based eco-genetic model is devised that includes neutral and functional loci in a realistic ecological setting. In line with theoretical expectations, we find that fishing induces evolution towards slow growth, early maturation at small size and higher reproductive investment. We show, first, that...

  13. Adaptation to coastal hazards: the livelihood struggles of a fishing community in Kerala, India.

    Santha, Sunil D

    2015-01-01

    This case study examines the coastal hazard adaptation strategies of a fishing community in a village in Kerala, India. It shows that formal adaptation strategies are highly techno-centric, costly, and do not take into account the vulnerabilities of the fishing community. Instead, they have contributed to ecological, livelihood, and knowledge uncertainties. The adaptation strategies of the fishing community are a response to these uncertainties. However, they may not lead to the fishing community's recovery from its vulnerability contexts. This case study is primarily qualitative in nature. Data were collected through in-depth interviews. Insights reveal that when actors with diverse values, interests, knowledge, and power evolve or design their respective adaptation strategies, the resulting interface often aggravates existing uncertainties associated with hazards. Furthermore, the study demonstrates that local discourses on coastal hazards are livelihood-centric and socially constructed within the struggle of the fishing community to access resources and to acquire the right to development. PMID:25230704

  14. Selection for adaptation to dietary shifts: towards sustainable breeding of carnivorous fish.

    Richard Le Boucher

    Full Text Available Genetic adaptation to dietary environments is a key process in the evolution of natural populations and is of great interest in animal breeding. In fish farming, the use of fish meal and fish oil has been widely challenged, leading to the rapidly increasing use of plant-based products in feed. However, high substitution rates impair fish health and growth in carnivorous species. We demonstrated that survival rate, mean body weight and biomass can be improved in rainbow trout (Oncorhynchus mykiss after a single generation of selection for the ability to adapt to a totally plant-based diet (15.1%, 35.3% and 54.4%, respectively. Individual variability in the ability to adapt to major diet changes can be effectively used to promote fish welfare and a more sustainable aquaculture.

  15. Adapting to environmental and market change: Insights from Fish Producer Organizations in Portugal

    V. Karadzic; P. Antunes; J. Grin

    2014-01-01

    To ensure the best market conditions for their fish, vessel owners are incentivized to create Fish Producer Organizations (PO), with obvious market advantages for fishers. However, the management of POs is not an easy task. This paper aims to understand how adaptation to environmental and market cha

  16. Distribution of Fish in the Upper Citarum River: an Adaptive Response to Physico-Chemical Properties

    SUNARDI; KEUKEU KANIAWATI; TEGUH HUSODO; DESAK MADE MALINI; ANNISA JOVIANI ASTARI

    2012-01-01

    Distribution of fish in river is controlled by physico-chemical properties of the water which is affected by land-use complexity and intensity of human intervention. A study on fish distribution was carried out in the upper Citarum River to map the effects of physio-chemical properties on habitat use. A survey was conducted to collect fish and to measure the water quality both on dry and rainy season. The result showed that distribution of the fish, in general, represented their adaptive resp...

  17. The adaptation of biological membranes to temperature and pressure: fish from the deep and cold.

    Cossins, A R; Macdonald, A G

    1989-02-01

    The homeostatic regulation of bilayer order is a property of functional importance. Arguably, it is best studied in those organisms which experience and must overcome disturbances in bilayer order which may be imposed by variations in temperature of hydrostatic pressure. This article reviews our recent work on the adaptations of order in brain membranes of those fish which acclimate to seasonal changes in temperature or which have evolved in extreme thermal or abyssal habitats. The effects of temperature and pressure upon hydrocarbon order and phase state are reviewed to indicate the magnitude of the disturbances experienced by animals in their environments over the seasonal or evolutionary timescale. Acclimation of fish to altered temperature leads to a partial correction of order, while comparison of fish from extreme cold environments with those from temperate or tropical waters reveals a more complete adaptation. Fish from the deep sea also display adaptations of bilayer order which largely overcome the ordering effects of pressure. PMID:2651424

  18. Ecology and Evolution of Adaptive Morphological Variation in Fish Populations

    Svanbäck, Richard

    2004-01-01

    The work in this thesis deals with the ecology and evolution of adaptive individual variation. Ecologists have long used niche theory to describe the ecology of a species as a whole, treating conspecific individuals as ecological equivalent. During recent years, research about individual variation in diet and morphology has gained interest in adaptive radiations and ecological speciation. Such variation among individual niche use may have important conservation implications as well as ecologi...

  19. Adaptive capacity of fishing communities at marine protected areas: a case study from the Colombian Pacific.

    Moreno-Sánchez, Rocío del Pilar; Maldonado, Jorge Higinio

    2013-12-01

    Departing from a theoretical methodology, we estimate empirically an index of adaptive capacity (IAC) of a fishing community to the establishment of marine protected areas (MPAs). We carried out household surveys, designed to obtain information for indicators and sub-indicators, and calculated the IAC. Moreover, we performed a sensitivity analysis to check for robustness of the results. Our findings show that, despite being located between two MPAs, the fishing community of Bazán in the Colombian Pacific is highly vulnerable and that the socioeconomic dimension of the IAC constitutes the most binding dimension for building adaptive capacity. Bazán is characterized by extreme poverty, high dependence on resources, and lack of basic public infrastructure. Notwithstanding, social capital and local awareness about ecological conditions may act as enhancers of adaptive capacity. The establishment of MPAs should consider the development of strategies to confer adaptive capacity to local communities highly dependent on resource extraction. PMID:24213997

  20. Stress physiology in fish : central regulation and organismal adaptions

    Metz, Juriaan Rogier

    2006-01-01

    The main goal of this thesis was to investigate the central regulation of the stress 428042response and consequent organismal adaptations in the common carp, Cyprinus carpio. In chapter 2 the control by CRH of ACTH release from the pituitary PD is investigated. It further describes the immunohistoch

  1. The Adaptive Radiation of Cichlid Fish in Lake Tanganyika: A Morphological Perspective

    Tetsumi Takahashi

    2011-01-01

    Full Text Available Lake Tanganyika is the oldest of the Great Ancient Lakes in the East Africa. This lake harbours about 250 species of cichlid fish, which are highly diverse in terms of morphology, behaviour, and ecology. Lake Tanganyika's cichlid diversity has evolved through explosive speciation and is treated as a textbook example of adaptive radiation, the rapid differentiation of a single ancestor into an array of species that differ in traits used to exploit their environments and resources. To elucidate the processes and mechanisms underlying the rapid speciation and adaptive radiation of Lake Tanganyika's cichlid species assemblage it is important to integrate evidence from several lines of research. Great efforts have been, are, and certainly will be taken to solve the mystery of how so many cichlid species evolved in so little time. In the present review, we summarize morphological studies that relate to the adaptive radiation of Lake Tanganyika's cichlids and highlight their importance for understanding the process of adaptive radiation.

  2. Lake morphometry and resource polymorphism determine niche segregation between cool- and cold-water-adapted fish.

    Hayden, Brian; Harrod, Chris; Kahilaineni, Kimmo K

    2014-02-01

    Climate change is increasing ambient temperatures in Arctic and subarctic regions, facilitating latitudinal range expansions of freshwater fishes adapted to warmer water temperatures. The relative roles of resource availability and interspecific interactions between resident and invading species in determining the outcomes of such expansions has not been adequately evaluated. Ecological interactions between a cool-water adapted fish, the perch (Perca fluviatilis), and the cold-water adapted European whitefish (Coregonus lavaretus), were studied in both shallow and deep lakes with fish communities dominated by (1) monomorphic whitefish, (2) monomorphic whitefish and perch, and (3) polymorphic whitefish and perch. A combination of stomach content, stable-isotope, and invertebrate prey availability data were used to identify resource use and niche overlap among perch, the trophic generalist large sparsely rakered (LSR) whitefish morph, and the pelagic specialist densely rakered (DR) whitefish morph in 10 subarctic lakes at the contemporary distribution limit of perch in northern Scandinavia. Perch utilized its putative preferred littoral niche in all lakes. LSR whitefish utilized both littoral and pelagic resources in monomorphic whitefish-dominated lakes. When found in sympatry with perch, LSR whitefish exclusively utilized pelagic prey in deep lakes, but displayed niche overlap with perch in shallow littoral lakes. DR whitefish was a specialist zooplanktivore, relegating LSR whitefish from pelagic habitats, leading to an increase in niche overlap between LSR whitefish and perch in deep lakes. Our results highlight how resource availability (lake depth and fish community) governs ecological interactions between native and invading species, leading to different outcomes even at the same latitudes. These findings suggest that lake morphometry and fish community structure data should be included in bioclimate envelope-based models of species distribution shifts

  3. The Adaptive Radiation of Cichlid Fish in Lake Tanganyika: A Morphological Perspective

    Tetsumi Takahashi; Stephan Koblmüller

    2011-01-01

    Lake Tanganyika is the oldest of the Great Ancient Lakes in the East Africa. This lake harbours about 250 species of cichlid fish, which are highly diverse in terms of morphology, behaviour, and ecology. Lake Tanganyika's cichlid diversity has evolved through explosive speciation and is treated as a textbook example of adaptive radiation, the rapid differentiation of a single ancestor into an array of species that differ in traits used to exploit their environments and resources. To elucidate...

  4. Aspects of the Evolution and Adaptive Significance of Regional Endothermy in Fishes

    Sepulveda, Chugey J.A.

    2005-01-01

    This dissertation addressed questions related to the selective advantages of regional endothermy and its independent evolution among several fish groups. The chapters integrate laboratory and field physiological measurements to provide a better understanding ofthe evolution of regional endothermy and its importance as an adaptation to the pelagic environment. Studies on the swimming energetics of the eastern Pacific bonito (Sarda chiliensis) revealed that the bonito had a similar cost of tran...

  5. Evolution of genomic structural variation and genomic architecture in the adaptive radiations of African cichlid fishes

    Shaohua eFan

    2014-06-01

    Full Text Available African cichlid fishes are an ideal system for studying explosive rates of speciation and the origin of diversity in adaptive radiation. Within the last few million years, more than 2000 species have evolved in the Great Lakes of East Africa, the largest adaptive radiation in vertebrates. These young species show spectacular diversity in their coloration, morphology and behavior. However, little is known about the genomic basis of this astonishing diversity. Recently, five African cichlid genomes were sequenced, including that of the Nile tilapia (Oreochromis niloticus, a basal and only relatively moderately diversified lineage, and the genomes of four representative endemic species of the adaptive radiations, Neolamprologus brichardi, Astatotilapia burtoni, Metriaclima zebra, and Pundamila nyererei. Using the tilapia genome as the reference genome, we generated a high-resolution genomic variation map, consisting of single nucleotide polymorphisms (SNPs, short insertions and deletions (indels, inversions and deletions. In total, around 18.8, 17.7, 17.0 and 17.0 million SNPs, 2.3, 2.2, 1.4 and 1.9 million indels, 262, 306, 162, and 154 inversions, and 3509, 2705, 2710 and 2634 deletions were inferred to have evolved in the N. brichardi, A. burtoni, P. nyererei and M. zebra respectively. Many of these variations affected the annotated gene regions in the genome. Different patterns of genetic variation were detected during the adaptive radiation of African cichlid fishes. For SNPs, the highest rate of evolution was detected in the common ancestor of N. brichardi, A. burtoni, P. nyererei and M. zebra. However, for the evolution of inversions and deletions, we found that the rates at the terminal taxa are substantially higher than the rates at the ancestral lineages. The high-resolution map provides an ideal opportunity to understand the genomic bases of the adaptive radiation of African cichlid fishes.

  6. The Adaptation of Fishing Instruments by a Farmers' Community in the Thung Kula Area, in North Eastern Thailand

    Worawan Ubonlert

    2009-01-01

    Full Text Available Problem statement: In a historical study of the ancient communities in the area of Thung Kula, it was revealed that there are important resources including rice, fish, salt and iron. Salt is used in making fermented fish (known locally as Pla Daek, a culinary culture which has been prevalent in the ethnic groups of Laos and Khmer. The availability of rice and fish in Thung Kula has continued to this day. Thung Kula farmers have extended their fishing sources from the government-owned places to their own fields or ponds. Approach: They use fishing instruments that had been developed out of folk wisdom in combination with the new technology in order to increase the fishing yields adequate for their own consumption and for commerce. The present research aimed to study the adaptation of fishing instruments of the farmers at Ban Ta Yuak, Thung Luang sub-district, Suwannaphum district, Roi-Et province. The studied area was Thung Kula in the North East of Thailand. The research method was qualitative. Data were collected from relevant documents and from field studies with 25 informants. Structured and unstructured interviews were conducted with local tradesmen, consumers, fishing-instrument shop owners. Results: The results were presented descriptively below. The adaptation of fishing instruments of Ban Ta Yuak farmers began with the increased population, the changing ecological systems as a result of the government’s construction of reservoirs, canals, public ponds and the market-oriented economy which had attracted the local fishing markets across the Thung Kula area. Ban Ta Yuak farmers have then adapted their fishing instruments to fit the available kinds of fish and the ecological systems of the local water sources. With assistance from the government, the farmers have their own fishing ponds. It was found that prior to the application of the national economic and social plan of 1962 these farmers created simple fishing instruments such as Sai (a

  7. Testing the stages model in the adaptive radiation of cichlid fishes in East African Lake Tanganyika.

    Muschick, Moritz; Nosil, Patrik; Roesti, Marius; Dittmann, Marie Theres; Harmon, Luke; Salzburger, Walter

    2014-11-22

    Adaptive radiation (AR) is a key process in the origin of organismal diversity. However, the evolution of trait disparity in connection with ecological specialization is still poorly understood. Available models for vertebrate ARs predict that diversification occurs in the form of temporal stages driven by different selective forces. Here, we investigate the AR of cichlid fishes in East African Lake Tanganyika and use macroevolutionary model fitting to evaluate whether diversification happened in temporal stages. Six trait complexes, for which we also provide evidence of their adaptiveness, are analysed with comparative methods: body shape, pharyngeal jaw shape, gill raker traits, gut length, brain weight and body coloration. Overall, we do not find strong evidence for the 'stages model' of AR. However, our results suggest that trophic traits diversify earlier than traits implicated in macrohabitat adaptation and that sexual communication traits (i.e. coloration) diversify late in the radiation. PMID:25274371

  8. Adaptive phenotypic plasticity in the Midas cichlid fish pharyngeal jaw and its relevance in adaptive radiation

    Salzburger Walter

    2011-04-01

    Full Text Available Abstract Background Phenotypic evolution and its role in the diversification of organisms is a central topic in evolutionary biology. A neglected factor during the modern evolutionary synthesis, adaptive phenotypic plasticity, more recently attracted the attention of many evolutionary biologists and is now recognized as an important ingredient in both population persistence and diversification. The traits and directions in which an ancestral source population displays phenotypic plasticity might partly determine the trajectories in morphospace, which are accessible for an adaptive radiation, starting from the colonization of a novel environment. In the case of repeated colonizations of similar environments from the same source population this "flexible stem" hypothesis predicts similar phenotypes to arise in repeated subsequent radiations. The Midas Cichlid (Amphilophus spp. in Nicaragua has radiated in parallel in several crater-lakes seeded by populations originating from the Nicaraguan Great Lakes. Here, we tested phenotypic plasticity in the pharyngeal jaw of Midas Cichlids. The pharyngeal jaw apparatus of cichlids, a second set of jaws functionally decoupled from the oral ones, is known to mediate ecological specialization and often differs strongly between sister-species. Results We performed a common garden experiment raising three groups of Midas cichlids on food differing in hardness and calcium content. Analyzing the lower pharyngeal jaw-bones we find significant differences between diet groups qualitatively resembling the differences found between specialized species. Observed differences in pharyngeal jaw expression between groups were attributable to the diet's mechanical resistance, whereas surplus calcium in the diet was not found to be of importance. Conclusions The pharyngeal jaw apparatus of Midas Cichlids can be expressed plastically if stimulated mechanically during feeding. Since this trait is commonly differentiated - among

  9. Detection of Anthropogenic Particles in Fish Stomachs: An Isolation Method Adapted to Identification by Raman Spectroscopy.

    Collard, France; Gilbert, Bernard; Eppe, Gauthier; Parmentier, Eric; Das, Krishna

    2015-10-01

    Microplastic particles (MP) contaminate oceans and affect marine organisms in several ways. Ingestion combined with food intake is generally reported. However, data interpretation often is circumvented by the difficulty to separate MP from bulk samples. Visual examination often is used as one or the only step to sort these particles. However, color, size, and shape are insufficient and often unreliable criteria. We present an extraction method based on hypochlorite digestion and isolation of MP from the membrane by sonication. The protocol is especially well adapted to a subsequent analysis by Raman spectroscopy. The method avoids fluorescence problems, allowing better identification of anthropogenic particles (AP) from stomach contents of fish by Raman spectroscopy. It was developed with commercial samples of microplastics and cotton along with stomach contents from three different Clupeiformes fishes: Clupea harengus, Sardina pilchardus, and Engraulis encrasicolus. The optimized digestion and isolation protocol showed no visible impact on microplastics and cotton particles while the Raman spectroscopic spectrum allowed the precise identification of microplastics and textile fibers. Thirty-five particles were isolated from nine fish stomach contents. Raman analysis has confirmed 11 microplastics and 13 fibers mainly made of cellulose or lignin. Some particles were not completely identified but contained artificial dyes. The novel approach developed in this manuscript should help to assess the presence, quantity, and composition of AP in planktivorous fish stomachs. PMID:26289815

  10. Evolutionary force in confamiliar marine vertebrates of different temperature realms: adaptive trends in zoarcid fish transcriptomes

    Windisch Heidrun Sigrid

    2012-10-01

    Full Text Available Abstract Background Studies of temperature-induced adaptation on the basis of genomic sequence data were mainly done in extremophiles. Although the general hypothesis of an increased molecular flexibility in the cold is widely accepted, the results of thermal adaptation are still difficult to detect at proteomic down to the genomic sequence level. Approaches towards a more detailed picture emerge with the advent of new sequencing technologies. Only small changes in primary protein structure have been shown to modify kinetic and thermal properties of enzymes, but likewise for interspecies comparisons a high genetic identity is still essential to specify common principles. The present study uses comprehensive transcriptomic sequence information to uncover general patterns of thermal adaptation on the RNA as well as protein primary structure. Results By comparing orthologous sequences of two closely related zoarcid fish inhabiting different latitudinal zones (Antarctica: Pachycara brachycephalum, temperate zone: Zoarces viviparus we were able to detect significant differences in the codon usage. In the cold-adapted species a lower GC content in the wobble position prevailed for preserved amino acids. We were able to estimate 40-60% coverage of the functions represented within the two compared zoarcid cDNA-libraries on the basis of a reference genome of the phylogenetically closely related fish Gasterosteus aculeatus. A distinct pattern of amino acid substitutions could be identified for the non-synonymous codon exchanges, with a remarkable surplus of serine and reduction of glutamic acid and asparagine for the Antarctic species. Conclusion Based on the differences between orthologous sequences from confamiliar species, distinguished mainly by the temperature regimes of their habitats, we hypothesize that temperature leaves a signature on the composition of biological macromolecules (RNA, proteins with implications for the transcription and

  11. Population genomics of local adaptation versus speciation in coral reef fishes (Hypoplectrus spp, Serranidae).

    Picq, Sophie; McMillan, W Owen; Puebla, Oscar

    2016-04-01

    Are the population genomic patterns underlying local adaptation and the early stages of speciation similar? Addressing this question requires a system in which (i) local adaptation and the early stages of speciation can be clearly identified and distinguished, (ii) the amount of genetic divergence driven by the two processes is similar, and (iii) comparisons can be repeated both taxonomically (for local adaptation) and geographically (for speciation). Here, we report just such a situation in the hamlets (Hypoplectrus spp), brightly colored reef fishes from the wider Caribbean. Close to 100,000 SNPs genotyped in 126 individuals from three sympatric species sampled in three repeated populations provide genome-wide levels of divergence that are comparable among allopatric populations (F st estimate = 0.0042) and sympatric species (F st estimate = 0.0038). Population genetic, clustering, and phylogenetic analyses reveal very similar patterns for local adaptation and speciation, with a large fraction of the genome undifferentiated (F st estimate ≈ 0), a very small proportion of F st outlier loci (0.05-0.07%), and remarkably few repeated outliers (1-3). Nevertheless, different loci appear to be involved in the two processes in Hypoplectrus, with only 7% of the most differentiated SNPs and outliers shared between populations and species comparisons. In particular, a tropomyosin (Tpm4) and a previously identified hox (HoxCa) locus emerge as candidate loci (repeated outliers) for local adaptation and speciation, respectively. We conclude that marine populations may be locally adapted notwithstanding shallow levels of genetic divergence, and that from a population genomic perspective, this process does not appear to differ fundamentally from the early stages of speciation. PMID:27099711

  12. Neurovestibular adaptation in the utricular otolith in fish to hypergravity exposure and re-adaptation to 1G

    Boyle, R.; Popova, Ye.; Varelas, J.; Mofrad, A.

    The inner ear utricular organ senses the sum of inertial force due to head translation and head tilt relative to the gravitational vertical. A change in gravitational force has a profound effect on how an organism maintains equilibrium, and the neural response might involve the peripheral otolith receptors, the brain or both. If the influence of G leads to adaptation and subsequent re-adaptation processes in otolith function upon return to 1G, then this raises fundamental questions: does the transfer from 1G to 3G impart the opposite effects on changes of synaptic structure and gravitational sensitivity seen following G exposure? Do the effects accompanying transfer from the 3G to the 1G conditions resemble in part (as an analog) the transfer from 1G to the G? The use of well-controlled hyper-G experiments allows us to address these questions. Adult fish were placed in groups and exposed to 3G for 1, 2, 3, 4, 5, 8, 16, 24, and 32 days. Re-adaptation to 1G was studied in 3G exposure (4-and 16-day) following 1-8 day of recovery. Typically ∼60 afferents are well characterized in each fish. Directional sensitivity of each afferent defined as the vector with the magnitude measured in unit gain (imp/s/g) is determined. It allows us to consider the diagram of directional sensitivity of the whole macula. For quantitative estimates of the change of afferent sensitivity in hyper-G experiments two functions have been introduced: probability function (maximum sensitivity of each afferent is plotted as a percentage of population sensitivity whose values is less than the individual sensitivity) and the frequency function (or probability density function-PDF) of the population of afferents on the gain. These functions enable us to extract additional information about the details of evolution of gain-afferent distribution. Results to date show a biphasic pattern in reaction to 3G exposures: an initial sensitivity up-regulation (3-and 4-day) followed by a significant decrease

  13. The interaction of sexually and naturally selected traits in the adaptive radiations of cichlid fishes.

    Salzburger, Walter

    2009-01-01

    The question of how genetic variation translates into organismal diversity has puzzled biologists for decades. Despite recent advances in evolutionary and developmental genetics, the mechanisms that underlie adaptation, diversification and evolutionary innovation remain largely unknown. The exceptionally diverse species flocks of cichlid fishes are textbook examples of adaptive radiation and explosive speciation and emerge as powerful model systems to study the genetic basis of animal diversification. East Africa's hundreds of endemic cichlid species are akin to a natural mutagenesis screen and differ greatly not only in ecologically relevant (hence naturally selected) characters such as mouth morphology and body shape, but also in sexually selected traits such as coloration. One of the most fascinating aspects of cichlid evolution is the frequent occurrence of evolutionary parallelisms, which has led to the question whether selection alone is sufficient to produce these parallel morphologies, or whether a developmental or genetic bias has influenced the direction of diversification. Here, I review fitness-relevant traits that could be responsible for the cichlids' evolutionary success and assess whether these were shaped by sexual or natural selection. I then focus on the interaction and the relative importance of sexual vs. natural selection in cichlid evolution. Finally, I discuss what is currently known about the genes underlying the morphogenesis of adaptively relevant traits and highlight the importance of the forthcoming cichlid genomes in the quest of the genetic basis of diversification in this group. PMID:18992003

  14. Whole genome sequencing of turbot (Scophthalmus maximus; Pleuronectiformes): a fish adapted to demersal life

    Figueras, Antonio; Robledo, Diego; Corvelo, André; Hermida, Miguel; Pereiro, Patricia; Rubiolo, Juan A.; Gómez-Garrido, Jèssica; Carreté, Laia; Bello, Xabier; Gut, Marta; Gut, Ivo Glynne; Marcet-Houben, Marina; Forn-Cuní, Gabriel; Galán, Beatriz; García, José Luis; Abal-Fabeiro, José Luis; Pardo, Belen G.; Taboada, Xoana; Fernández, Carlos; Vlasova, Anna; Hermoso-Pulido, Antonio; Guigó, Roderic; Álvarez-Dios, José Antonio; Gómez-Tato, Antonio; Viñas, Ana; Maside, Xulio; Gabaldón, Toni; Novoa, Beatriz; Bouza, Carmen; Alioto, Tyler; Martínez, Paulino

    2016-01-01

    The turbot is a flatfish (Pleuronectiformes) with increasing commercial value, which has prompted active genomic research aimed at more efficient selection. Here we present the sequence and annotation of the turbot genome, which represents a milestone for both boosting breeding programmes and ascertaining the origin and diversification of flatfish. We compare the turbot genome with model fish genomes to investigate teleost chromosome evolution. We observe a conserved macrosyntenic pattern within Percomorpha and identify large syntenic blocks within the turbot genome related to the teleost genome duplication. We identify gene family expansions and positive selection of genes associated with vision and metabolism of membrane lipids, which suggests adaptation to demersal lifestyle and to cold temperatures, respectively. Our data indicate a quick evolution and diversification of flatfish to adapt to benthic life and provide clues for understanding their controversial origin. Moreover, we investigate the genomic architecture of growth, sex determination and disease resistance, key traits for understanding local adaptation and boosting turbot production, by mapping candidate genes and previously reported quantitative trait loci. The genomic architecture of these productive traits has allowed the identification of candidate genes and enriched pathways that may represent useful information for future marker-assisted selection in turbot. PMID:26951068

  15. Can air-breathing fish be adapted to higher than present temperatures?

    Bayley, Mark; Damsgaard, Christian; Thomsen, Mikkel;

    Air-breathing in fish is thought to have evolved in environments at lower than present oxygen levels and higher than present temperatures raising the question of whether extant species are adapted to recent temperature regimes or living at sub-optimal temperatures. The air-breathing Pangasionodon...... hypophthalmus inhabits the Mekong river system covering two climate zones during its life cycle and migrating more than 2000 km from hatching in northern Laos to its adult life in the southern delta region. It is a facultative air-breather with well-developed gills and air-breathing organ and an unusual...... circulatory bauplan. Here we examine the question of its optimal temperature through aspects of its cardio respiratory physiology including temperature effects on blood oxygen binding, ventilation and blood gasses, stereological measures of cardiorespiratory system, metabolic rate and growth. Comparing...

  16. Comprehensive Transcriptome Analysis of Six Catfish Species from an Altitude Gradient Reveals Adaptive Evolution in Tibetan Fishes

    Xiuhui Ma

    2016-01-01

    Full Text Available Glyptosternoid fishes (Siluriformes, one of the three broad fish lineages (the two other are schizothoracines and Triplophysa, have a limited distribution in the rivers in the Tibetan Plateau and peripheral regions. To investigate the genetic mechanisms underlying adaptation to the Tibetan Plateau in several fish species from gradient altitudes, a total of 20,659,183–37,166,756 sequence reads from six species of catfish were generated by Illumina sequencing, resulting in six assemblies. Analysis of the 1,656 orthologs among the six assembled catfish unigene sets provided consistent evidence for genome-wide accelerated evolution in the three glyptosternoid lineages living at high altitudes. A large number of genes refer to functional categories related to hypoxia and energy metabolism exhibited rapid evolution in the glyptosternoid lineages relative to yellowhead catfish living in plains areas. Genes showing signatures of rapid evolution and positive selection in the glyptosternoid lineages were also enriched in functions associated with energy metabolism and hypoxia. Our analyses provide novel insights into highland adaptation in fishes and can serve as a foundation for future studies aiming to identify candidate genes underlying the genetic basis of adaptation in Tibetan fishes.

  17. Adaption of egg and larvae sampling techniques for lake sturgeon and broadcast spawning fishes in a deep river

    Roseman, Edward F.; Kennedy, Gregory W.; Craig, Jaquelyn; Boase, James; Soper, Karen

    2011-01-01

    In this report we describe how we adapted two techniques for sampling lake sturgeon (Acipenser fulvescens) and other fish early life history stages to meet our research needs in the Detroit River, a deep, flowing Great Lakes connecting channel. First, we developed a buoy-less method for sampling fish eggs and spawning activity using egg mats deployed on the river bottom. The buoy-less method allowed us to fish gear in areas frequented by boaters and recreational anglers, thus eliminating surface obstructions that interfered with recreational and boating activities. The buoy-less method also reduced gear loss due to drift when masses of floating aquatic vegetation would accumulate on buoys and lines, increasing the drag on the gear and pulling it downstream. Second, we adapted a D-frame drift net system formerly employed in shallow streams to assess larval lake sturgeon dispersal for use in the deeper (>8 m) Detroit River using an anchor and buoy system.

  18. The network structure of adaptive governance - A single case study of a fish management area

    Annica Charlotte Sandström

    2009-09-01

    Full Text Available The challenge of establishing adaptive management systems is a widely discussed topic in the literature on natural resource management. Adaptive management essentially focuses on achieving a governance process that is both sensitive to and has the capacity to continuously react to changes within the ecosystem being managed. The adoption of a network approach that perceives governance structures as social networks, searching for the kind of network features promoting this important feature, has been requested by researchers in the field. In particular, the possibilities associated with the application of a formal network approach, using the tools and concepts of social network analysis (SNA, have been identified as having significant potential for advancing this branch of research. This paper aims to address the relation between network structure and adaptability using an empirical approach. With the point of departure in a previously generated theoretical framework as well as related hypotheses, this paper presents a case study of a governance process within a fish management area in Sweden. The hypotheses state that, although higher levels of network density and centralisation promote the rule-forming process, the level of network heterogeneity is important for the existence and spread of ecological knowledge among the actors involved. According to the empirical results, restricted by the single-case study design, this assumption is still a well-working hypothesis. However, in order to advance our knowledge concerning these issues and test the validity of the hypotheses, more empirical work using a similar approach in multiple case study designs is needed.

  19. Osmoregulatory adaptations of freshwater air-breathing snakehead fish (Channa striata) after exposure to brackish water.

    Nakkrasae, La-iad; Wisetdee, Khanitha; Charoenphandhu, Narattaphol

    2015-07-01

    NaCl-rich rock salt dissolved in natural water source leads to salinity fluctuation that profoundly affects freshwater ecosystem and aquatic fauna. The snakehead (Channa striata) can live in saline water, but the osmoregulatory mechanisms underlying this ability remain unclear. Herein, we found that exposure to salinities ≥ 10‰ NaCl markedly elevated plasma cortisol and glucose levels, and caused muscle dehydration. In a study of time-dependent response after being transferred from fresh water (0‰ NaCl, FW) to salt-dissolved brackish water (10‰ NaCl, SW), FW-SW, cortisol increased rapidly along with elevations of plasma glucose and lactate. Interestingly, plasma cortisol returned to baseline after prolonged exposure, followed by a second peak that probably enhanced the branchial Na(+)/K(+)-ATPase activity. Under SW-FW condition, Na(+)/K(+)-ATPase activity was not altered as compared to SW-adapted fish. In conclusion, salinity change, especially FW-SW, induced a stress response and hence cortisol release in C. striata, which might increase plasma glucose and lactate to energize the branchial Na(+)/K(+)-ATPase. PMID:25899744

  20. Fishing

    姜群山

    2002-01-01

    @@ Last Saturday my cousin (表兄) came to my home. We were very happy to see each other. We decided that the next day we went to fish. We got up very early that day. When we left home,the moon could still be seen in the sky.

  1. Adaptive responses to osmotic stress in kidney-derived cell lines from Scatophagus argus, a euryhaline fish.

    Gui, Lang; Zhang, Peipei; Liang, Xuemei; Su, Maoliang; Wu, Di; Zhang, Junbin

    2016-06-01

    The euryhaline fish, the spotted scat (Scatophagus argus), is exceptional for its ability to tolerate rapid fluctuations in salinity. To better understand fish osmoregulation and enable more precise analyses of specific features of adaptive responses to the osmotic stress in fish, a S. argus kidney-derived cell line (SK) was developed and subcultured for more than 70 passages. The cells were mostly fibroblast-like, with a normal diploid karyotype (2n=48). A low-osmolarity-adapted SK cell line (SK-la) was induced by growth in a hypotonic solution (150 mOsm). Effects of different osmotic stresses (150, 300 and 450 mOsm) on cell growth, cell morphology, cell volume changes and cell damage in SK, SK-la and CIK (a kidney-derived cell line from freshwater grass carp) cells were studied. These were compared by use of microscopic observation, flow cytometry and a Na-K-ATPase (NKA) assay. SK cells became smaller and grew rapidly in response to hypotonic stress (150 mOsm), and exhibited no visible morphological changes in response to hypertonic stress (450 mOsm). SK-la grew well by moderate hypertonicity (300 mOsm) but depressed in severe hypertonicity (450 mOsm), the number of unhealthy SK-la cells rose as osmolarity increased. In contrast, CIK cells became unhealthy with anisotonic challenge. The NKA activities of SK and CIK cells were assayed after exposure to anisotonic conditions, and rapid decreases were detected immediately except SK cells which were not affected in hypotonicity. Unlike in SK and CIK, an increase following a down-regulation of NKA activity was observed in SK-la cells upon moderate hypertonic stress. These results suggested that SK and SK-la cells had stronger osmoregulatory capacity than CIK cells, and provided new insights on the osmosensing and osmotic adaption in euryhaline fish kidney. PMID:26911257

  2. Multi-metal contamination with uranium trend impact on aquatic environment and consequences for fish immune system and adaptive responses

    Le Guernic, A.; Gagnaire, B. [IRSN/PRP-ENV/SERIS/LECO (France); Sanchez, W. [Institut national de l' environnement industriel et des risques - INERIS (France); Betoulle, S. [Champagne Ardenne University (France)

    2014-07-01

    Human activities have conducted to an increase of concentrations of various metals in aquatic ecosystems, including uranium. Its extraction and use have been rapidly magnified because of its role in the nuclear fuel cycle. These activities have led to high concentrations of uranium in the aquatic environment and thus a potential risk to exposed organisms, including fish. Consequences can be observed through metabolic and physiological responses, called biomarkers. Some biomarkers are interesting in order to evaluate the effects of metal contamination, among other immunotoxicity markers, antioxidant defenses and genotoxicity. The aims of this study are: i) to investigate the effects of a multi-metal contamination on a fish, the three-spined stickleback, Gasterosteus aculeatus, and ii) to observe the adaptive capacity of fish due to a combination of stress (chemical stress and biological stress). To meet the first objective, six water bodies (ponds and lakes) located in two departments (Cantal and Haute-Vienne, France) were chosen according to their proximity to old uranium mines and to their levels of metal contamination related to chemical processes appeared during extraction. 240 three-spined sticklebacks were caged for 28 days in the six selected sites. A battery of biomarkers was measured in fish sampled after 14 and 28 of caging. The results for the Haute-Vienne department showed that caged fish in the pond with the highest uranium concentration (20 μg.L{sup -1}) presented the most DNA damage after 14 days of caging. Leukocyte phagocytosis (marker of immunotoxicity) of caged fish in this pond was lower at 14 days and greater at 28 days compared to other ponds without uranium. The multi-metal contamination negatively affected other parameters such as the condition index, oxidative activity, viability of lysosomal membrane and leukocytes distribution. In order to study the response of fish to a combined stress (chemical + biological) (objective ii), a second

  3. Multi-metal contamination with uranium trend impact on aquatic environment and consequences for fish immune system and adaptive responses

    Human activities have conducted to an increase of concentrations of various metals in aquatic ecosystems, including uranium. Its extraction and use have been rapidly magnified because of its role in the nuclear fuel cycle. These activities have led to high concentrations of uranium in the aquatic environment and thus a potential risk to exposed organisms, including fish. Consequences can be observed through metabolic and physiological responses, called biomarkers. Some biomarkers are interesting in order to evaluate the effects of metal contamination, among other immunotoxicity markers, antioxidant defenses and genotoxicity. The aims of this study are: i) to investigate the effects of a multi-metal contamination on a fish, the three-spined stickleback, Gasterosteus aculeatus, and ii) to observe the adaptive capacity of fish due to a combination of stress (chemical stress and biological stress). To meet the first objective, six water bodies (ponds and lakes) located in two departments (Cantal and Haute-Vienne, France) were chosen according to their proximity to old uranium mines and to their levels of metal contamination related to chemical processes appeared during extraction. 240 three-spined sticklebacks were caged for 28 days in the six selected sites. A battery of biomarkers was measured in fish sampled after 14 and 28 of caging. The results for the Haute-Vienne department showed that caged fish in the pond with the highest uranium concentration (20 μg.L-1) presented the most DNA damage after 14 days of caging. Leukocyte phagocytosis (marker of immunotoxicity) of caged fish in this pond was lower at 14 days and greater at 28 days compared to other ponds without uranium. The multi-metal contamination negatively affected other parameters such as the condition index, oxidative activity, viability of lysosomal membrane and leukocytes distribution. In order to study the response of fish to a combined stress (chemical + biological) (objective ii), a second

  4. Unique evolutionary trajectories in repeated adaptation to hydrogen sulphide-toxic habitats of a neotropical fish (Poecilia mexicana).

    Pfenninger, Markus; Patel, Simit; Arias-Rodriguez, Lenin; Feldmeyer, Barbara; Riesch, Rüdiger; Plath, Martin

    2015-11-01

    Replicated ecological gradients are prime systems to study processes of molecular evolution underlying ecological divergence. Here, we investigated the repeated adaptation of the neotropical fish Poecilia mexicana to habitats containing toxic hydrogen sulphide (H2 S) and compared two population pairs of sulphide-adapted and ancestral fish by sequencing population pools of >200 individuals (Pool-Seq). We inferred the evolutionary processes shaping divergence and tested the hypothesis of increase of parallelism from SNPs to molecular pathways. Coalescence analyses showed that the divergence occurred in the face of substantial bidirectional gene flow. Population divergence involved many short, widely dispersed regions across the genome. Analyses of allele frequency spectra suggest that differentiation at most loci was driven by divergent selection, followed by a selection-mediated reduction of gene flow. Reconstructing allelic state changes suggested that selection acted mainly upon de novo mutations in the sulphide-adapted populations. Using a corrected Jaccard index to quantify parallel evolution, we found a negligible proportion of statistically significant parallel evolution of Jcorr  = 0.0032 at the level of SNPs, divergent genome regions (Jcorr  = 0.0061) and genes therein (Jcorr  = 0.0091). At the level of metabolic pathways, the overlap was Jcorr  = 0.2545, indicating increasing parallelism with increasing level of biological integration. The majority of pathways contained positively selected genes in both sulphide populations. Hence, adaptation to sulphidic habitats necessitated adjustments throughout the genome. The largely unique evolutionary trajectories may be explained by a high proportion of de novo mutations driving the divergence. Our findings favour Gould's view that evolution is often the unrepeatable result of stochastic events with highly contingent effects. PMID:26405850

  5. [Adaptive increase of serotonergic system activity in tissues of half-migratory and migratory fish at increased water salinity].

    2013-01-01

    The article deals with studies of the serotoninergic system activity in different tissues of half-migratory fish--the Caspian roach (Rutilus rutilus caspicus) and carpbream (Abramis brama orientalis)--and migratory fish--shemaya (Chalcalburnus chalcoides) caught in fresh and brackish waters, as well as in the common carp (Cyprinus carpio L.) tissues under effect of brackish water in model experiments. Using indirect solid-phase ELISA-test, the serotoninergic system activity was evaluated by measuring in the tissues of the studied fish the serotonin-modulated anticonsolidation protein (SMAP) which is in linear relationship with serotonin level. There was found a significant elevation of the SMAP levels in the brain of the Caspian roach, carpbream, shemaya, and the common carp under effect of increased water sainity. The revealed increase of the SMAP content in brains of the Caspian roach, carpbream, shemaya, and the common carp under action of increased water salinity reflects the corresponding elevated activity of the serotoninergic system and indicates involvement of adaptive readjustments in the animals' body. PMID:25509051

  6. Science questions for implementing climate refugia for cold-water fish as an adaptation strateby

    Managing climate refugia has been proposed as a potential adaptation strategy that may be useful for protecting the biotic integrity of watersheds under a changing climate. Paleo-ecological evidence suggests that refugia allowed species to persist through prior periods of climate...

  7. Evolution of opercle shape in cichlid fishes from Lake Tanganyika - adaptive trait interactions in extant and extinct species flocks.

    Wilson, Laura A B; Colombo, Marco; Sánchez-Villagra, Marcelo R; Salzburger, Walter

    2015-01-01

    Phenotype-environment correlations and the evolution of trait interactions in adaptive radiations have been widely studied to gain insight into the dynamics underpinning rapid species diversification. In this study we explore the phenotype-environment correlation and evolution of operculum shape in cichlid fishes using an outline-based geometric morphometric approach combined with stable isotope indicators of macrohabitat and trophic niche. We then apply our method to a sample of extinct saurichthyid fishes, a highly diverse and near globally distributed group of actinopterygians occurring throughout the Triassic, to assess the utility of extant data to inform our understanding of ecomorphological evolution in extinct species flocks. A series of comparative methods were used to analyze shape data for 54 extant species of cichlids (N = 416), and 6 extinct species of saurichthyids (N = 44). Results provide evidence for a relationship between operculum shape and feeding ecology, a concentration in shape evolution towards present along with evidence for convergence in form, and significant correlation between the major axes of shape change and measures of gut length and body elongation. The operculum is one of few features that can be compared in extant and extinct groups, enabling reconstruction of phenotype-environment interactions and modes of evolutionary diversification in deep time. PMID:26584885

  8. Information as Adaptation to a Changing Climate: Managing the Intersection of Forests, Fish, Fire, and Water Resources on Public Lands

    Luce, C.; Morgan, P.; Dwire, K. A.; Isaak, D.; Holden, Z. A.; Rieman, B.

    2013-12-01

    Climate change is altering the wildlands of the west, principally through changes in the water cycle. In many places there is and will be less water than there once was, and such water as there is will runoff from mountain snowpacks earlier each year. A drier climate in the western U.S. will promote a greater role of fire and other mortality events for many forests. Consequently, how managers prepare for and respond to events such as fire, or large scale insect outbreaks is becoming more important as the climate changes. Sometimes, these events punctuate gradual changes to ecosystems, and sometimes they generate stepwise changes in ecosystems, making it clear that climate vulnerability assessments should account for disturbance in their calculus. We describe a framework of how fire and climate change work together to affect forest and fish communities. Learning how to adapt will come from testing, probing, and pushing that framework to discover the most robust strategies to increased disturbance risks. The western U.S. defies generalizations, and much learning must necessarily be local in implication. We argue that successful adaptation does not simply constitute setting forest and stream communities on the appropriate path, rather it requires teaching wildland resource managers how to learn quickly and respond insightfully as the events associated climate change unfold.

  9. Introgressive Hybridization and the Evolution of Lake-Adapted Catostomid Fishes.

    Dowling, Thomas E; Markle, Douglas F; Tranah, Greg J; Carson, Evan W; Wagman, David W; May, Bernard P

    2016-01-01

    Hybridization has been identified as a significant factor in the evolution of plants as groups of interbreeding species retain their phenotypic integrity despite gene exchange among forms. Recent studies have identified similar interactions in animals; however, the role of hybridization in the evolution of animals has been contested. Here we examine patterns of gene flow among four species of catostomid fishes from the Klamath and Rogue rivers using molecular and morphological traits. Catostomus rimiculus from the Rogue and Klamath basins represent a monophyletic group for nuclear and morphological traits; however, the Klamath form shares mtDNA lineages with other Klamath Basin species (C. snyderi, Chasmistes brevirostris, Deltistes luxatus). Within other Klamath Basin taxa, D. luxatus was largely fixed for alternate nuclear alleles relative to C. rimiculus, while Ch. brevirostris and C. snyderi exhibited a mixture of these alleles. Deltistes luxatus was the only Klamath Basin species that exhibited consistent covariation of nuclear and mitochondrial traits and was the primary source of mismatched mtDNA in Ch. brevirostris and C. snyderi, suggesting asymmetrical introgression into the latter species. In Upper Klamath Lake, D. luxatus spawning was more likely to overlap spatially and temporally with C. snyderi and Ch. brevirostris than either of those two with each other. The latter two species could not be distinguished with any molecular markers but were morphologically diagnosable in Upper Klamath Lake, where they were largely spatially and temporally segregated during spawning. We examine parallel evolution and syngameon hypotheses and conclude that observed patterns are most easily explained by introgressive hybridization among Klamath Basin catostomids. PMID:26959681

  10. Adaptive response to starvation in the fish pathogen Flavobacterium columnare: cell viability and ultrastructural changes

    Arias Covadonga R

    2012-11-01

    encountering nutrients. Challenge experiments shown that starved cells were avirulent for a fish host model. Conclusions Specific morphological and ultrastructural changes allowed F. columnare cells to remain viable under adverse conditions. Those changes were reversed by the addition of nutrients. This bacterium can survive in water without nutrients for extended periods of time although long-term starvation appears to decrease cell fitness and resulted in loss of virulence.

  11. H2S exposure elicits differential expression of candidate genes in fish adapted to sulfidic and non-sulfidic environments.

    Tobler, Michael; Henpita, Chathurika; Bassett, Brandon; Kelley, Joanna L; Shaw, Jennifer H

    2014-09-01

    Disentangling the effects of plasticity, genetic variation, and their interactions on organismal responses to environmental stressors is a key objective in ecological physiology. We quantified the expression of five candidate genes in response to hydrogen sulfide (H2S) exposure in fish (Poecilia mexicana, Poeciliidae) from a naturally sulfide-rich environment as well as an ancestral, non-sulfidic population to test for constitutive and environmentally dependent population differences in gene expression patterns. Common garden raised individuals that had never encountered environmental H2S during their lifetime were subjected to short or long term H2S exposure treatments or respective non-sulfidic controls. The expression of genes involved in responses to H2S toxicity (cytochrome c oxidase, vascular endothelial growth factor, and cytochrome P450-2J6), H2S detoxification (sulfide:quinone oxidoreductase), and endogenous H2S production (cystathionine γ lyase) was determined in both gill and liver tissues by real time PCR. The results indicated complex changes in expression patterns that--depending on the gene--not only differed between organs and populations, but also on the type of H2S exposure. Populations differences, both constitutive and H2S exposure dependent (i.e., plastic), in gene expression were particularly evident for sulfide:quinone oxidoreductase, vascular endothelial growth factor, and to a lesser degree for cytochrome P450-2J6. Our study uncovered putatively adaptive modifications in gene regulation that parallel previously documented adaptive changes in phenotypic traits. PMID:24813672

  12. Leap of faith: voluntary emersion behaviour and physiological adaptations to aerial exposure in a non-aestivating freshwater fish in response to aquatic hypoxia.

    Urbina, Mauricio A; Forster, Malcolm E; Glover, Chris N

    2011-05-01

    Lowland stream fauna in areas of intensive agriculture are increasingly under threat from anthropogenic activities leading to eutrophication and subsequent hypoxia. Survival of hypoxic episodes depends upon a combination of behavioural and physiological adaptations. Responses of inanga (Galaxias maculatus: Galaxiidae) to aquatic hypoxia were investigated in the laboratory. Contrary to expectation inanga did not display behaviour that might reduce energy expenditure during oxygen limitation, with swimming activity slightly, but significantly elevated relative to normoxia. Instead, as dissolved oxygen concentrations decreased, the fish moved higher in the water column, increased their swimming speed and exhibited aquatic surface respiration. Physiological changes such as enhanced opercular frequency were also noted. As hypoxia deepened inanga started to leap out of the water, emersing themselves on a floating platform. Once emersed, fish exhibited an enhanced oxygen consumption rate compared to hypoxic fish. Thus inanga appear better adapted to escape hypoxia (a behavioural adaptation) rather than tolerate it (physiological adaptation). The emersion strategy used for inanga in response to severe hypoxia is in agreement with their ability to take up more oxygen from the air than from hypoxic water and therefore may justify the potentially increased risks of desiccation and predation associated with leaving the water. PMID:21316378

  13. Explaining bathymetric diversity patterns in marine benthic invertebrates and demersal fishes: physiological contributions to adaptation of life at depth.

    Brown, Alastair; Thatje, Sven

    2014-05-01

    Bathymetric biodiversity patterns of marine benthic invertebrates and demersal fishes have been identified in the extant fauna of the deep continental margins. Depth zonation is widespread and evident through a transition between shelf and slope fauna from the shelf break to 1000 m, and a transition between slope and abyssal fauna from 2000 to 3000 m; these transitions are characterised by high species turnover. A unimodal pattern of diversity with depth peaks between 1000 and 3000 m, despite the relatively low area represented by these depths. Zonation is thought to result from the colonisation of the deep sea by shallow-water organisms following multiple mass extinction events throughout the Phanerozoic. The effects of low temperature and high pressure act across hierarchical levels of biological organisation and appear sufficient to limit the distributions of such shallow-water species. Hydrostatic pressures of bathyal depths have consistently been identified experimentally as the maximum tolerated by shallow-water and upper bathyal benthic invertebrates at in situ temperatures, and adaptation appears required for passage to deeper water in both benthic invertebrates and demersal fishes. Together, this suggests that a hyperbaric and thermal physiological bottleneck at bathyal depths contributes to bathymetric zonation. The peak of the unimodal diversity-depth pattern typically occurs at these depths even though the area represented by these depths is relatively low. Although it is recognised that, over long evolutionary time scales, shallow-water diversity patterns are driven by speciation, little consideration has been given to the potential implications for species distribution patterns with depth. Molecular and morphological evidence indicates that cool bathyal waters are the primary site of adaptive radiation in the deep sea, and we hypothesise that bathymetric variation in speciation rates could drive the unimodal diversity-depth pattern over time. Thermal

  14. Adapt

    Bargatze, L. F.

    2015-12-01

    Active Data Archive Product Tracking (ADAPT) is a collection of software routines that permits one to generate XML metadata files to describe and register data products in support of the NASA Heliophysics Virtual Observatory VxO effort. ADAPT is also a philosophy. The ADAPT concept is to use any and all available metadata associated with scientific data to produce XML metadata descriptions in a consistent, uniform, and organized fashion to provide blanket access to the full complement of data stored on a targeted data server. In this poster, we present an application of ADAPT to describe all of the data products that are stored by using the Common Data File (CDF) format served out by the CDAWEB and SPDF data servers hosted at the NASA Goddard Space Flight Center. These data servers are the primary repositories for NASA Heliophysics data. For this purpose, the ADAPT routines have been used to generate data resource descriptions by using an XML schema named Space Physics Archive, Search, and Extract (SPASE). SPASE is the designated standard for documenting Heliophysics data products, as adopted by the Heliophysics Data and Model Consortium. The set of SPASE XML resource descriptions produced by ADAPT includes high-level descriptions of numerical data products, display data products, or catalogs and also includes low-level "Granule" descriptions. A SPASE Granule is effectively a universal access metadata resource; a Granule associates an individual data file (e.g. a CDF file) with a "parent" high-level data resource description, assigns a resource identifier to the file, and lists the corresponding assess URL(s). The CDAWEB and SPDF file systems were queried to provide the input required by the ADAPT software to create an initial set of SPASE metadata resource descriptions. Then, the CDAWEB and SPDF data repositories were queried subsequently on a nightly basis and the CDF file lists were checked for any changes such as the occurrence of new, modified, or deleted

  15. From good to eat to good to watch: whale watching, adaptation and change in Icelandic fishing communities

    Einarsson, Níels

    2009-01-01

    Arctic and North Atlantic fishing communities may seem unlikely candidates for a viable whale-watching industry, because of the prevalent traditional consumptive attitudes towards marine mammals and their uses. The topic of this paper is the introduction of an internationally growing industry of whale watching in a fishing village in north-east Iceland, and how local inhabitants reconcile opposing views on whales, whaling and the new cetacean tourism. The paper also discusses the conflict bet...

  16. Hot spots in cold adaptation: Localized increases in conformational flexibility in lactate dehydrogenase A4 orthologs of Antarctic notothenioid fishes

    Fields, Peter A.; Somero, George N.

    1998-01-01

    To elucidate mechanisms of enzymatic adaptation to extreme cold, we determined kinetic properties, thermal stabilities, and deduced amino acid sequences of lactate dehydrogenase A4 (A4-LDH) from nine Antarctic (−1.86 to 1°C) and three South American (4 to 10°C) notothenioid teleosts. Higher Michaelis–Menten constants (Km) and catalytic rate constants (kcat) distinguish orthologs of Antarctic from those of South American species, but no relationship exists between adaptation temperature and th...

  17. Individual Behavioral Adaptability to Diminished G-Forces and Calcium Uptake of Inner ear Otoliths in Fish. A Sounding Rocket Experiment (TX 48)

    Knie, Miriam; Shcherbakov, Denis; Hilbig, Reinhard

    2013-02-01

    In the course of the TEXUS 45 experiment we were able to show that the time-course of a habituation to diminished gravity depends on the respective G-level HQM (high quality microgravity, 10-4g) vs. LQM (low quality microgravity, 10-2g) and on the symmetric morphology of the gravity sensing components of the inner ear. An individually different regulation of inner ear otolith calcification plays a role in this process. With this study, the results of the TEXUS 45 flight were validated for another g-level (9x10-4g). In the course of the behavioural investigations we were able to show that most fish could adapt to these μg condition. Fish experiencing permanently 9x10-4g during the whole flight exhibit less kinetotic movements and from this we conclude, that they might use this minimal g-force for orientation. Furthermore these behavioural data were correlated with the morphology of otoliths (Lapilli and Sagittae).

  18. Adaptative features of ectothermic enzymes. III--Studies on phosphoglucose isomerase (PGI) from five species of tropical fishes of the superorder Ostariophysi.

    Coppes de Achaval, Z; Schwantes, M L; Schwantes, A R; De Luca, P H; Val, A L

    1982-01-01

    1. The electrokinetic and thermostability properties of phosphoglucose isomerase (PGI) in five species of tropical fish (Ostariophysi)-Leporinus friderici, L. silverstrii, Schizodon nasuttus, Hypostomus sp and Pimelodus maculatus--have been studied in order to study the adaptative nature of protein heterogeneity found in ectotherms. 2. Unlike most diploid fishes, the PGI of these species seemed to be encoded by three, four or five loci. 3. The subunits encoded by these loci occurred at different levels in the different tissues and organs analyzed. 4. Genetic variants at the three PGI loci were detected in two species of the family Anostomidae (L. friderici and S. nasuttus). In the family Pimelodidae, P. Maculatus showed a genetic variant as the Pgi-1 locus. 5. The product of these loci could be separated in three PGI regions based on their electrophoretic mobility, tissue distribution and thermostability properties. 6. The more anodal region (including isozymes and allozymes) was more thermolabile then the less anodal one, which is predominant in a single tissue-skeletal muscle. PMID:7116811

  19. Science to support adaptive habitat management: Overton Bottoms North Unit, Big Muddy National Fish and Wildlife Refuge, Missouri [Volumes 1-6

    Jacobson, Robert B.

    2006-01-01

    Extensive efforts are underway along the Lower Missouri River to rehabilitate ecosystem functions in the channel and flood plain. Considerable uncertainty inevitably accompanies ecosystem restoration efforts, indicating the benefits of an adaptive management approach in which management actions are treated as experiments, and results provide information to feed back into the management process. The Overton Bottoms North Unit of the Big Muddy National Fish and Wildlife Refuge is a part of the Missouri River Fish and Wildlife Habitat Mitigation Project. The dominant management action at the Overton Bottoms North Unit has been excavation of a side-channel chute to increase hydrologic connectivity and to enhance shallow, slow current-velocity habitat. The side-channel chute also promises to increase hydrologic gradients, and may serve to alter patterns of wetland inundation and vegetation community growth in undesired ways. The U.S. Geological Survey's Central Region Integrated Studies Program (CRISP) undertook interdisciplinary research at the Overton Bottoms North Unit in 2003 to address key areas of scientific uncertainty that were highly relevant to ongoing adaptive management of the site, and to the design of similar rehabilitation projects on the Lower Missouri River. This volume presents chapters documenting the surficial geologic, topographic, surface-water, and ground-water framework of the Overton Bottoms North Unit. Retrospective analysis of vegetation community trends over the last 10 years is used to evaluate vegetation responses to reconnection of the Overton Bottoms North Unit to the river channel. Quasi-experimental analysis of cottonwood growth rate variation along hydrologic gradients is used to evaluate sensitivity of terrestrial vegetation to development of aquatic habitats. The integrated, landscape-specific understanding derived from these studies illustrates the value of scientific information in design and management of rehabilitation projects.

  20. Locally adapted fish populations maintain small-scale genetic differentiation despite perturbation by a catastrophic flood event

    Plath Martin

    2010-08-01

    Full Text Available Abstract Background Local adaptation to divergent environmental conditions can promote population genetic differentiation even in the absence of geographic barriers and hence, lead to speciation. Perturbations by catastrophic events, however, can distort such parapatric ecological speciation processes. Here, we asked whether an exceptionally strong flood led to homogenization of gene pools among locally adapted populations of the Atlantic molly (Poecilia mexicana, Poeciliidae in the Cueva del Azufre system in southern Mexico, where two strong environmental selection factors (darkness within caves and/or presence of toxic H2S in sulfidic springs drive the diversification of P. mexicana. Nine nuclear microsatellites as well as heritable female life history traits (both as a proxy for quantitative genetics and for trait divergence were used as markers to compare genetic differentiation, genetic diversity, and especially population mixing (immigration and emigration before and after the flood. Results Habitat type (i.e., non-sulfidic surface, sulfidic surface, or sulfidic cave, but not geographic distance was the major predictor of genetic differentiation. Before and after the flood, each habitat type harbored a genetically distinct population. Only a weak signal of individual dislocation among ecologically divergent habitat types was uncovered (with the exception of slightly increased dislocation from the Cueva del Azufre into the sulfidic creek, El Azufre. By contrast, several lines of evidence are indicative of increased flood-induced dislocation within the same habitat type, e.g., between different cave chambers of the Cueva del Azufre. Conclusions The virtual absence of individual dislocation among ecologically different habitat types indicates strong natural selection against migrants. Thus, our current study exemplifies that ecological speciation in this and other systems, in which extreme environmental factors drive speciation, may be little

  1. Allozyme genotypic indicators of adaptive responses in contaminant-exposed populations: Consistency among fish species and contaminants

    Enzyme genotypic frequency shifts, or unique patterns have been suggested as useful indicators of long-term adaptive responses in contaminant-exposed populations. These genetic responses are also biologically relevant as they can result in loss of alleles and adaptive capacity. Enzyme genotypic data from several exposures were compared to determine whether genotype at specific enzyme loci, and at multiple loci, are consistently related to differential survival during toxicant exposure. Results of mosquitofish (Gambusia holbrooki) laboratory exposures to mercury and arsenic, genetic characterization of mosquitofish from a coal ash settling basin, and several acute and chronic exposures of fathead minnows (Pimephales promelas) to fluoranthene in the presence of UV light were compared. In mosquitofish exposures (laboratory and field) genotype at glucosephosphate isomerase (Gpi) loci were consistently related to time to death or apparent shifts in enzyme genotypic frequencies in field-exposed populations (P 2 comparisons). In addition, genotype-mortality relationships were consistent among laboratory mercury and arsenic exposures when multiple-locus genotypes were considered. When isocitrate dehydrogenase (Idh), Gpi, and malate dehydrogenase (Mdh) loci were combined the resulting multiple locus genotype was related to time to death (P 2 comparisons). Enzyme genotype at the Gpi locus was significantly related to time of mortality or enzyme frequency differences in 7 of 10 comparisons (P 2 comparisons)

  2. Behavioural adaptations of rheophilic fish radio-tracked in a river highly fragmented by hydroelectric plants. Outcomes of a partial reopening of their migration routes.

    Ovidio, Michaël; Dierckx, Arnaud; Benitez, Jean-Philippe; Philippart, Jean-Claude; Orban, Patrice

    2012-01-01

    Using water resources for hydroelectricity production influences and limits the quality and quantity of habitat available for use by fishes and influences fish mobility. In the Amblève (River Meuse basin, Belgium), the major part of the river is fragmented by hydroelectric power plants that largely prevent the biological movements of the fish population. In 2007, in the hydroelectric site of Lorcé, a modern pool-type fish pass was constructed, re-establishing the upstream movements of fish af...

  3. Persistent organochlorines in high-Antarctic fish; Persistente chlororganische Verbindungen in hochantarktischen Fischen

    Zimmermann, S.

    1997-11-01

    24 chlorinated hydrocarbons from different classes (PCB, HCH, DDT, Chlordane, Hexachlorobenzene and Octachlorostyrene) were analyzed in four species of high-Antarctic fish (Aethotaxis mitopteryx, Pleuragramma antarcticum, Trematomus lepidorhinus, and Chinodraco myersi). The concentrations were in the order of 1 {mu}g/kg wet weight or 10 {mu}g/kg lipid weight, respectively. Highest concentrations were measured for HCB in all species. The species showed different distribution patterns for the organochlorines studied. Compared with concentrations in fish from other regions the organochlorine levels measured in Antarctic fish are rather low. It is unlikely that the burden of organochlorines will cause any toxic effects in high-Antarctic fish yet. Nevertheless, with regard to the sensitive Antarctic ecosystem, even small concentrations carry a high risk of harm for Antarctic life. Environmental pollution in Antarctica should be observed with a monitoring program using standardized methods. For this purpose, the fish species studied are very useful as bioindicators for organochlorine contamination. (orig.) [Deutsch] 24 persistente Chlorkohlenwasserstoffe verschiedener Schadstoffgruppen (PCB, HCH, DDT, Chlordan, Hexachlorbenzol und Octachlorstyrol) wurden in vier hochantarktischen Fischarten (Aethotaxis mitopteryx, Pleuragramma antarcticum, Trematomus lepidorhinus und Chionodraco myersi). Die Konzentrationen der nachgewiesenen Schadstoffe im Ganzfisch liegen jeweils in der Groessenordnung von 1 {mu}g/kg Feuchtgewicht bzw. 10 {mu}g/kg Lipidgewicht mit erheblichen Schwankungen je nach Schadstoff und Art. Die Spezies zeigen artspezifische Schadstoffverteilungsmuster. Die Konzentrationen sind gegenueber denen in Fischen aus Gebieten mit staerkerem zivilisatorischem Einfluss eher niedrig. Die Fremstoffbelastungen der hochantarktischen Fische fuehren wahrscheinlich noch nicht zu messbaren toxischen Effekten bei den Fischen. Dennoch geht von den Schadstoffen in Hinblick auf das

  4. Fish Allergy

    ... Story" 5 Things to Know About Zika & Pregnancy Fish Allergy KidsHealth > For Parents > Fish Allergy Print A ... From Home en español Alergia al pescado About Fish Allergy A fish allergy is not exactly the ...

  5. Parasitic infection by larval helminths in Antarctic fishes: pathological changes and impact on the host body condition index

    Santoro, Mario; Mattiucci, Simonetta; Work, Thierry; Cimmaruta, Roberta; Nardi, Valentina; Cipriani, Paolo; Bellisario, Bruno; Nascetti, Giuseppe

    2013-01-01

    We examined pathological changes and relationship between body condition index (BCI) and parasitic infection in 5 species of fish, including 42 icefish Chionodraco hamatus (Channichtyidae), 2 dragonfish Cygnodraco mawsoni (Bathydraconidae), 30 emerald rock cod Trematomus bernacchii, 46 striped rock cod T. hansoni and 9 dusty rock cod T. newnesi (Nototheniidae) from the Ross Sea, Antarctica. All parasites were identified by a combination of morphology and mtDNA cytochrome-oxidase-2 sequence (mtDNA cox2) analysis, except Contracaecum osculatum s.l., for which only the latter was used. Five larval taxa were associated with pathological changes including 2 sibling species (D and E) of the C. osculatum species complex and 3 cestodes including plerocercoids of a diphyllobothridean, and 2 tetraphyllidean forms including cercoids with monolocular and bilocular bothridia. The most heavily infected hosts were C. hamatus and C. mawsoni, with C. hamatus most often infected by C. osculatum sp. D and sp. E and diphyllobothrideans, while C. mawsoni was most often infected with tetraphyllidean forms. Histologically, all fish showed varying severity of chronic inflammation associated with larval forms of helminths. Diphyllobothrideans and C. osculatum spp. were located in gastric muscularis or liver and were associated with necrosis and mild to marked fibrosis. Moderate multifocal rectal mucosal chronic inflammation was associated with attached tetraphyllidean scolices. C. hamatus showed a strong negative correlation between BCI and parasite burden.

  6. Fish hemoglobins

    P.C. de Souza

    2007-06-01

    Full Text Available Vertebrate hemoglobin, contained in erythrocytes, is a globular protein with a quaternary structure composed of 4 globin chains (2 alpha and 2 beta and a prosthetic group named heme bound to each one. Having myoglobin as an ancestor, hemoglobin acquired the capacity to respond to chemical stimuli that modulate its function according to tissue requirements for oxygen. Fish are generally submitted to spatial and temporal O2 variations and have developed anatomical, physiological and biochemical strategies to adapt to the changing environmental gas availability. Structurally, most fish hemoglobins are tetrameric; however, those from some species such as lamprey and hagfish dissociate, being monomeric when oxygenated and oligomeric when deoxygenated. Fish blood frequently possesses several hemoglobins; the primary origin of this finding lies in the polymorphism that occurs in the globin loci, an aspect that may occasionally confer advantages to its carriers or even be a harmless evolutionary remnant. On the other hand, the functional properties exhibit different behaviors, ranging from a total absence of responses to allosteric regulation to drastic ones, such as the Root effect.

  7. Testing for adaptive evolution of the female reproductive protein ZPC in mammals, birds and fishes reveals problems with the M7-M8 likelihood ratio test

    Berlin Sofia; Smith Nick GC

    2005-01-01

    Abstract Background Adaptive evolution appears to be a common feature of reproductive proteins across a very wide range of organisms. A promising way of addressing the evolutionary forces responsible for this general phenomenon is to test for adaptive evolution in the same gene but among groups of species, which differ in their reproductive biology. One can then test evolutionary hypotheses by asking whether the variation in adaptive evolution is consistent with the variation in reproductive ...

  8. Age estimates for an adaptive lake fish radiation, its mitochondrial introgression, and an unexpected sister group: Sailfin silversides of the Malili Lakes system in Sulawesi

    Stelbrink, Björn; Stöger, Isabella; Hadiaty, Renny K; Schliewen, Ulrich K.; Herder, Fabian

    2014-01-01

    Background The Malili Lakes system in central Sulawesi (Indonesia) is a hotspot of freshwater biodiversity in the Wallacea, characterized by endemic species flocks like the sailfin silversides (Teleostei: Atherinomorpha: Telmatherinidae) radiation. Phylogenetic reconstructions of these freshwater fishes have previously revealed two Lake Matano Telmatherina lineages (sharpfins and roundfins) forming an ancient monophyletic group, which is however masked by introgressive hybridization of sharpf...

  9. MASS FISHING BY CORMORANTS PHALACROCORAX-CARBO-SINENSIS AT LAKE IJSSELMEER, THE NETHERLANDS - A RECENT AND SUCCESSFUL ADAPTATION TO A TURBID ENVIRONMENT

    VANEERDEN, MR; VOSLAMBER, B

    1995-01-01

    The habit of mass fishing by Cormorants at lake IJsselmeer, The Netherlands, is a recent phenomenon. During the first half of the 1970s the birds changed behaviour probably as a result of the deteriorating under water visibility in the lake (3-4 m water depth). The behavioural switch coincided with

  10. Why do fish school?

    Matz LARSSON

    2012-02-01

    Full Text Available Synchronized movements (schooling emit complex and overlapping sound and pressure curves that might confuse the inner ear and lateral line organ (LLO of a predator. Moreover, prey-fish moving close to each other may blur the electro-sensory perception of predators. The aim of this review is to explore mechanisms associated with synchronous swimming that may have contributed to increased adaptation and as a consequence may have influenced the evolution of schooling. The evolutionary development of the inner ear and the LLO increased the capacity to detect potential prey, possibly leading to an increased potential for cannibalism in the shoal, but also helped small fish to avoid joining larger fish, resulting in size homogeneity and, accordingly, an increased capacity for moving in synchrony. Water-movements and incidental sound produced as by-product of locomotion (ISOL may provide fish with potentially useful information during swimming, such as neighbour body-size, speed, and location. When many fish move close to one another ISOL will be energetic and complex. Quiet intervals will be few. Fish moving in synchrony will have the capacity to discontinue movements simultaneously, providing relatively quiet intervals to allow the reception of potentially critical environmental signals. Besides, synchronized movements may facilitate auditory grouping of ISOL. Turning preference bias, well-functioning sense organs, good health, and skillful motor performance might be important to achieving an appropriate distance to school neighbors and aid the individual fish in reducing time spent in the comparatively less safe school periphery. Turning preferences in ancestral fish shoals might have helped fish to maintain groups and stay in formation, reinforcing aforementioned predator confusion mechanisms, which possibly played a role in the lateralization of the vertebrate brain [Current Zoology 58 (1: 116–128, 2012].

  11. Why do fish school?

    Matz LARSSON

    2012-01-01

    Synchronized movements (schooling) emit complex and overlapping sound and pressure curves that might confuse the inner ear and lateral line organ (LLO) of a predator.Moreover,prey-fish moving close to each other may blur the electro-sensory perception of predators.The aim of this review is to explore mechanisms associated with synchronous swimming that may have contributed to increased adaptation and as a consequence may have influenced the evolution of schooling.The evolutionary development of the inner ear and the LLO increased the capacity to detect potential prey,possibly leading to an increased potential for cannibalism in the shoal,but also helped small fish to avoid joining larger fish,resulting in size homogeneity and,accordingly,an increased capacity for moving in synchrony.Water-movements and incidental sound produced as by-product of locomotion (ISOL) may provide fish with potentially useful information during swimming,such as neighbour body-size,speed,and location.When many fish move close to one another ISOL will be energetic and complex.Quiet intervals will be few.Fish moving in synchrony will have the capacity to discontinue movements simultaneously,providing relatively quiet intervals to allow the reception of potentially critical environmental signals.Besides,synchronized movements may facilitate auditory grouping of ISOL.Turning preference bias,well-functioning sense organs,good health,and skillful motor performance might be important to achieving an appropriate distance to school neighbors und aid the individual fish in reducing time spent in the comparatively less safe school periphery.Turning preferences in ancestral fish shoals might have helped fish to maintain groups and stay in formarion,reinforcing aforementioned predator confusion mechanisms,which possibly played a role in the lateralization of the vertebrate brain [Current Zoology 58 (1):116-128,2012].

  12. Why do fish school?

    Larsson, Matz

    2012-01-01

    Synchronized movements (schooling) emit complex and overlapping sound and pressure curves that might confuse the inner ear and lateral line organ (LLO) of a predator. Moreover, prey-fish moving close to each other may blur the electro-sensory perception of predators. The aim of this review is to explore mechanisms associated with synchronous swimming that may have contributed to increased adaptation and as a consequence may have influenced the evolution of schooling. The evolutionary developm...

  13. Fish health and fish quality

    Ingerslev, Hans-Christian

    Aquaculture is an expanding worldwide industry producing an increasing amount of fish every year. The quality of the fish meat is dependent upon many biological and non-biological factors. Infectious diseases are known to cause bleedings and damage of the muscle tissue that may lead to scarring...... are poorly described in fish. The present work in this thesis focused on: 1) examination of potential changes in the quality regarding texture of the muscle tissue in rainbow trout (Oncorhynchus mykiss) after previous infection with the bacterial pathogens Yersinia ruckeri and Vibrio anguillarum; 2...... of these studies showed that previous infections by Yersinia ruckeri and Vibrio anguillarum gave rise to subsequent changes regarding textural quality parameters in fresh fish meat, while no differences were seen for cold-smoked meat from the same fish. The texture in previous infected fish was less flaky and less...

  14. Competing risks and the development of adaptive management plans for water resources: Field reconnaissance investigation of risks to fishes and other aquatic biota exposed to endocrine disrupting chemicals (edcs) in lake mead, Nevada USA

    Linder, G.; Little, E.E.

    2009-01-01

    The analysis and characterization of competing risks for water resources rely on a wide spectrum of tools to evaluate hazards and risks associated with their management. For example, waters of the lower Colorado River stored in reservoirs such as Lake Mead present a wide range of competing risks related to water quantity and water quality. These risks are often interdependent and complicated by competing uses of source waters for sustaining biological resources and for supporting a range of agricultural, municipal, recreational, and industrial uses. USGS is currently conducting a series of interdisciplinary case-studies on water quality of Lake Mead and its source waters. In this case-study we examine selected constituents potentially entering the Lake Mead system, particularly endocrine disrupting chemicals (EDCs). Worldwide, a number of environmental EDCs have been identified that affect reproduction, development, and adaptive behaviors in a wide range of organisms. Many EDCs are minimally affected by current treatment technologies and occur in treated sewage effluents. Several EDCs have been detected in Lake Mead, and several substances have been identified that are of concern because of potential impacts to the aquatic biota, including the sport fishery of Lake Mead and endangered razorback suckers (Xyrauchen texanus) that occur in the Colorado River system. For example, altered biomarkers relevant to reproduction and thyroid function in fishes have been observed and may be predictive of impaired metabolism and development. Few studies, however, have addressed whether such EDC-induced responses observed in the field have an ecologically significant effect on the reproductive success of fishes. To identify potential linkages between EDCs and species of management concern, the risk analysis and characterization in this reconnaissance study focused on effects (and attendant uncertainties) that might be expressed by exposed populations. In addition, risk reduction

  15. Fish parasites

    This book contains 22 chapters on some of the most important parasitic diseases in wild and farmed fish. International experts give updated reviews and provide solutions to the problems......This book contains 22 chapters on some of the most important parasitic diseases in wild and farmed fish. International experts give updated reviews and provide solutions to the problems...

  16. Texture Fish

    Stone, Julie

    2007-01-01

    In an effort to provide an opportunity for her first graders to explore texture through an engaging subject, the author developed a three-part lesson that features fish in a mixed-media artwork: (1) Exploring Textured Paint; (2) Creating the Fish; and (3) Role Playing. In this lesson, students effectively explore texture through painting, drawing,…

  17. Parsing parallel evolution: ecological divergence and differential gene expression in the adaptive radiations of thick-lipped Midas cichlid fishes from Nicaragua.

    Manousaki, Tereza; Hull, Pincelli M; Kusche, Henrik; Machado-Schiaffino, Gonzalo; Franchini, Paolo; Harrod, Chris; Elmer, Kathryn R; Meyer, Axel

    2013-02-01

    The study of parallel evolution facilitates the discovery of common rules of diversification. Here, we examine the repeated evolution of thick lips in Midas cichlid fishes (the Amphilophus citrinellus species complex)-from two Great Lakes and two crater lakes in Nicaragua-to assess whether similar changes in ecology, phenotypic trophic traits and gene expression accompany parallel trait evolution. Using next-generation sequencing technology, we characterize transcriptome-wide differential gene expression in the lips of wild-caught sympatric thick- and thin-lipped cichlids from all four instances of repeated thick-lip evolution. Six genes (apolipoprotein D, myelin-associated glycoprotein precursor, four-and-a-half LIM domain protein 2, calpain-9, GTPase IMAP family member 8-like and one hypothetical protein) are significantly underexpressed in the thick-lipped morph across all four lakes. However, other aspects of lips' gene expression in sympatric morphs differ in a lake-specific pattern, including the magnitude of differentially expressed genes (97-510). Generally, fewer genes are differentially expressed among morphs in the younger crater lakes than in those from the older Great Lakes. Body shape, lower pharyngeal jaw size and shape, and stable isotopes (δ(13)C and δ(15)N) differ between all sympatric morphs, with the greatest differentiation in the Great Lake Nicaragua. Some ecological traits evolve in parallel (those related to foraging ecology; e.g. lip size, body and head shape) but others, somewhat surprisingly, do not (those related to diet and food processing; e.g. jaw size and shape, stable isotopes). Taken together, this case of parallelism among thick- and thin-lipped cichlids shows a mosaic pattern of parallel and nonparallel evolution. PMID:23057963

  18. Impact of Sea Level Rise on Mangrove Ecosystem and its Dependent Fishing Communities in the Coastal Regions of Cauvery Delta: A Message for Policy Planners to Frame Suitable Antcipatory Adaptation Strategies

    Amsad Ibrahim Khan, S. K.; Ramachandran, A.; Kandasamy, P.; Selvam, V.; Shanmugam, P.

    2014-12-01

    Coastal adaptation to sea-level rise (SLR) in the deltaic region is a multidimensional and complex process requiring informed decisions based on predicted impact and vulnerability assessment of SLR. Elevation plays a key role in determining the impact and vulnerability of coastal land areas to inundation from SLR. Highly accurate mapping of the elevation of the landscape is essential to identify low-lying coastal deltaic regions with valuable ecosystem like mangroves and its dependent human communities that are potentially at risk of inundation. It is difficult for policy planners and decision makers to identify suitable adaptation strategies without having information on the predicted impact and degree of vulnerability of coastal systems to SLR. Importantly, modeling and mapping will provide valuable input to climate change adaptation planning (NOAA 2010). Unfortunately, the comprehensive range of information that is typically required is seldom available and rarely in the possession of decision makers responsible for management of the deltaic and coastal zone (O'Regan, 1996). The present study seeks to provide insights on predicted impact of climate change induced SLR on mangrove ecosystem and its dependent human communities of Pichavaram mangroves, located at the Vellar-Coleroon estuarine region on the banks of Cauvery delta, Tamil Nadu, India. Based on real-time on-ground elevation measurement by DGPS (Differential Global Positioning System) survey and by using GIS portals, the study has identified about 597 ha of mangroves (one third of total mangrove regions) and about 9 fishing hamlets with 12,000 and more of human population that directly depends on this mangrove ecosystem for their livelihood are under threat of inundation to the predicted impact of 0.5m SLR. The present study is intended to showcase a method by providing reliable scientific information on predicted impact of SLR on mangroves and its dependent human communities to policy planner for

  19. Adaptive Management of Invasive Forest Plants - Forest Invasives Adaptive Mangement (FIAM)

    US Fish and Wildlife Service, Department of the Interior — This project provides guidance for conducting adaptive management of invasive species including inventories, prioritization, and treatment effectiveness monitoring...

  20. Age estimates for an adaptive lake fish radiation, its mitochondrial introgression, and an unexpected sister group: Sailfin silversides of the Malili Lakes system in Sulawesi

    2014-01-01

    Background The Malili Lakes system in central Sulawesi (Indonesia) is a hotspot of freshwater biodiversity in the Wallacea, characterized by endemic species flocks like the sailfin silversides (Teleostei: Atherinomorpha: Telmatherinidae) radiation. Phylogenetic reconstructions of these freshwater fishes have previously revealed two Lake Matano Telmatherina lineages (sharpfins and roundfins) forming an ancient monophyletic group, which is however masked by introgressive hybridization of sharpfins with riverine populations. The present study uses mitochondrial data, newly included taxa, and different external calibration points, to estimate the age of speciation and hybridization processes, and to test for phylogeographic relationships between Kalyptatherina from ancient islands off New Guinea, Marosatherina from SW Sulawesi, and the Malili Lakes flock. Results Contrary to previous expectations, Kalyptatherina is the closest relative to the Malili Lakes Telmatherinidae, and Marosatherina is the sister to this clade. Palaeogeographic reconstructions of Sulawesi suggest that the closer relationship of the Malili Lakes radiation to Kalyptatherina might be explained by a 'terrane-rafting’ scenario, while proto-Marosatherina might have colonized Sulawesi by marine dispersal. The most plausible analysis conducted here implies an age of c. 1.9 My for the onset of divergence between the two major clades endemic to Lake Matano. Diversification within both lineages is apparently considerably more recent (c. 1.0 My); stream haplotypes present in the sharpfins are of even more recent origin (c. 0.4 My). Conclusions Sulawesi’s Telmatherinidae have most likely originated in the Sahul Shelf area, have possibly reached the island by both, marine dispersal and island/terrane-rafting, and have colonized the Malili Lakes system from rivers. Estimates for the split between the epibenthic sharpfins and the predominantly pelagic to benthopelagic roundfins in Lake Matano widely

  1. One Fish, Two Fish, Redfish, You Fish!

    White, Katherine; Timmons, Maryellen; Medders, Paul

    2011-01-01

    The recreational fishing activity presented in this article provides a hands-on, problem-based experience for students; it unites biology, math, economics, environmental policy, and population dynamics concepts. In addition, the activity allows students to shape environmental policy in a realistic setting and evaluate their peers' work. By…

  2. The Genome of the Self-Fertilizing Mangrove Rivulus Fish, Kryptolebias marmoratus: A Model for Studying Phenotypic Plasticity and Adaptations to Extreme Environments

    Kelley, Joanna L.; Yee, Muh-Ching; Brown, Anthony P.; Richardson, Rhea R.; Tatarenkov, Andrey; Lee, Clarence C.; Harkins, Timothy T.; Bustamante, Carlos D.; Earley, Ryan L.

    2016-01-01

    The mangrove rivulus (Kryptolebias marmoratus) is one of two preferentially self-fertilizing hermaphroditic vertebrates. This mode of reproduction makes mangrove rivulus an important model for evolutionary and biomedical studies because long periods of self-fertilization result in naturally homozygous genotypes that can produce isogenic lineages without significant limitations associated with inbreeding depression. Over 400 isogenic lineages currently held in laboratories across the globe show considerable among-lineage variation in physiology, behavior, and life history traits that is maintained under common garden conditions. Temperature mediates the development of primary males and also sex change between hermaphrodites and secondary males, which makes the system ideal for the study of sex determination and sexual plasticity. Mangrove rivulus also exhibit remarkable adaptations to living in extreme environments, and the system has great promise to shed light on the evolution of terrestrial locomotion, aerial respiration, and broad tolerances to hypoxia, salinity, temperature, and environmental pollutants. Genome assembly of the mangrove rivulus allows the study of genes and gene families associated with the traits described above. Here we present a de novo assembled reference genome for the mangrove rivulus, with an approximately 900 Mb genome, including 27,328 annotated, predicted, protein-coding genes. Moreover, we are able to place more than 50% of the assembled genome onto a recently published linkage map. The genome provides an important addition to the linkage map and transcriptomic tools recently developed for this species that together provide critical resources for epigenetic, transcriptomic, and proteomic analyses. Moreover, the genome will serve as the foundation for addressing key questions in behavior, physiology, toxicology, and evolutionary biology. PMID:27324916

  3. Breeding resource specialization and speciation in fishes

    Reichard, Martin; Kitamura, J.; Smith, C.

    Berlin: Leibnitz-Institute of Freshwater Ecology and Inland Fisheries, 2009. s. 69. [International Conference on Evolutionary Ecology of Fishes Diversification, Adaptation and Speciation. 23.11.2009-25.11.2009, Berlin] R&D Projects: GA AV ČR KJB600930802 Institutional research plan: CEZ:AV0Z60930519 Keywords : fish reproduction Subject RIV: EH - Ecology, Behaviour

  4. Designer Fish.

    Hall, William R., Jr.

    1990-01-01

    Described is an activity in which students are asked to design a fish that would survive in a natural system. A project to computerize the activity is discussed. The development of this artificial intelligence software is detailed. (CW)

  5. Hawaii ESI: FISH (Fish Polygons)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for reef, marine, estuarine, and native stream fish species in coastal Hawaii. Vector polygons in this...

  6. Virginia ESI: FISH (Fish Polygons)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for marine, estuarine, anadromous, and brackishwater fish species in Virginia. Vector polygons in this...

  7. Alabama ESI: FISH (Fish Polygons)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for marine, estuarine, and freshwater fish species in Alabama. Vector polygons in this data set represent...

  8. Maryland ESI: FISH (Fish Polygons)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for marine, estuarine, anadromous, and freshwater fish species in Maryland. Vector polygons in this data...

  9. Louisiana ESI: FISH (Fish Polygons)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for freshwater (inland) fish species in coastal Louisiana. Vector polygons represent water-bodies and...

  10. Fishing amplifies forage fish population collapses

    Essington, Timothy E.; Moriarty, Pamela E.; Froehlich, Halley E.; Hodgson, Emma E.; Koehn, Laura E.; Oken, Kiva L.; Siple, Margaret C.; Stawitz, Christine C.

    2015-01-01

    Forage fish provide substantial benefits to both humans and ocean food webs, but these benefits may be in conflict unless there are effective policies governing human activities, such as fishing. Collapses of forage fish induce widespread ecological effects on dependent predators, but attributing collapses to fishing has been difficult because of natural fluctuations of these stocks. We implicate fishing in forage fish stock collapses by showing that high fishing rates are maintained when sto...

  11. Fish Facts

    ... fish because they worry about mercury in seafood. Mercury is a metal that, at high levels, can harm the brain of your unborn baby even before he or she is conceived. Yet many types of seafood have little or no mercury at all. So your risk of mercury exposure ...

  12. Climate adaptation strategy for natural resources released

    Showstack, Randy

    2013-04-01

    The National Fish, Wildlife, and Plants Climate Adaptation Strategy, released on 26 March by the Obama administration, calls for a series of measures to help public and private decision makers better address the effects of climate change on living natural resources. The measures include conserving habitat to support healthy fish, wildlife, and plant populations and ecosystem functions; managing species and habitats to protect ecosystem functions and provide sustainable commercial, subsistence, recreational, and cultural use; increasing knowledge and information about effects on and responses of fish, wildlife, and plants; and reducing nonclimate stressors to help fish, wildlife, plants, and ecosystems adapt.

  13. The Fishing Cat

    孙雅飞; 乐伟国

    2008-01-01

    @@ 一、故事内容 A cat goes fishing every day. He wants to eat fish, but he can't catch any fish. One day, he goes to the river as usual. Suddenly, a fish comes out. He catches the fish and putsthe fish in the basket. He's very happy, but he forgest to put the lid on the basket.

  14. Microbiological spoilage of fish and fish products

    Gram, Lone; Huss, Hans Henrik

    1996-01-01

    Spoilage of fresh and lightly preserved fish products is caused by microbial action. This paper reviews the current knowledge in terms of the microbiology of fish and fish products with particular emphasis on identification of specific spoilage bacteria and the qualitative and quantitative...... biochemical indicators of spoilage. Shewanzella putrefaciens and Pseudomonas spp. are the specific spoilage bacteria of iced fresh fish regardless of the origin of the fish. Modified atmosphere stored marine fish from temperate waters are spoiled by the CO2 resistant Photobacterium phosphoreum whereas Gram......- positive bacteria are likely spoilers of CO2 packed fish from fresh or tropical waters. Fish products with high salt contents may spoil due to growth of halophilic bacteria (salted fish) or growth of anaerobic bacteria and yeasts (barrel salted fish). Whilst the spoilage of fresh and highly salted fish...

  15. Threatened fishes of the world: Clarias dussumieri dussumieri (Valenciennes, 1840) (Clariidae)

    Padmakumar, K.G.; Bindu, L.; Basheer, V.S.; Gopalakrishnan, A.

    in ponds, streams and shallow derelict wetlands. They have biological and physiological adaptations to low oxygen conditions. They are predatory and feed on small fishes, insects and detritus. Reproduction: In nature, the fish has a single spawning season...

  16. Fish Tales

    McLerran, L.

    2010-07-06

    This talk is about fishing and the friendships that have resulted in its pursuit. It is also about theoretical physics, and the relationship of imagination and fantasy to the establishment of ideas about nature. Fishermen, like theoretical physicists, are well known for their inventive imaginations. Perhaps neither are as clever as sailors, who conceived of the mermaid. If one doubts the power of this fantasy, one should remember the ghosts of the many sailors who drowned pursuing these young nymphs. An extraordinary painting by J. Waterhouse is shown as Fig. 1. The enchantment of a mermaid must reflect an extraordinary excess of imagination on the part of the sailor, perhaps together with an impractical turn of mind. A consummated relationship with a mermaid is after all, by its very nature a fantasy incapable of realization. To a theoretical physicist, she is symbolic of many ideas we develop. There are many truths known to fisherman in which one might also find parallels to the goals of scientists: (1) A fish is the only animal that keeps growing after its death; (2) Nothing makes a fish bigger than almost being caught; (3) ''...of all the liars among mankind, the fisherman is the most trustworthy.'' (William Sherwood Fox, in Silken Lines and Silver Hooks); and (4) Men and fish are alike. They both get into trouble when they open their mouths. These quotes may be interpreted as reflecting skepticism regarding the honesty of fisherman, and probably do not reflect adequate admiration for a creative imagination. Is it fair to criticize a person for believing a falsehood that he or she sincerely believes to be true? The fisherman simultaneously invents the lie, and believes in it himself. The parallel with theoretical physics is perhaps only approximate, although we physicists may invent stories that we come to believe, on some rare occasions our ideas actually correspond to a more or less true descriptions of nature. These minor philosophical

  17. Fish Tales

    This talk is about fishing and the friendships that have resulted in its pursuit. It is also about theoretical physics, and the relationship of imagination and fantasy to the establishment of ideas about nature. Fishermen, like theoretical physicists, are well known for their inventive imaginations. Perhaps neither are as clever as sailors, who conceived of the mermaid. If one doubts the power of this fantasy, one should remember the ghosts of the many sailors who drowned pursuing these young nymphs. An extraordinary painting by J. Waterhouse is shown as Fig. 1. The enchantment of a mermaid must reflect an extraordinary excess of imagination on the part of the sailor, perhaps together with an impractical turn of mind. A consummated relationship with a mermaid is after all, by its very nature a fantasy incapable of realization. To a theoretical physicist, she is symbolic of many ideas we develop. There are many truths known to fisherman in which one might also find parallels to the goals of scientists: (1) A fish is the only animal that keeps growing after its death; (2) Nothing makes a fish bigger than almost being caught; (3) ''...of all the liars among mankind, the fisherman is the most trustworthy.'' (William Sherwood Fox, in Silken Lines and Silver Hooks); and (4) Men and fish are alike. They both get into trouble when they open their mouths. These quotes may be interpreted as reflecting skepticism regarding the honesty of fisherman, and probably do not reflect adequate admiration for a creative imagination. Is it fair to criticize a person for believing a falsehood that he or she sincerely believes to be true? The fisherman simultaneously invents the lie, and believes in it himself. The parallel with theoretical physics is perhaps only approximate, although we physicists may invent stories that we come to believe, on some rare occasions our ideas actually correspond to a more or less true descriptions of nature. These minor philosophical differences are not

  18. Turnbull - Palouse Prairie Restoration Adaptive Management

    US Fish and Wildlife Service, Department of the Interior — This project will continue and improve upon an adaptive management project funded under a large Volunteers and Weeds Grant received in 2008 to identify the best...

  19. Cardiac Remodelling in Thermally Acclimated Fish

    Fenna, Andrew

    2013-01-01

    Fish are subject to a variety of long and short term environmental and physical insults during their life; however they manage to adapt, ensuring physiological processes remain effective, enabling the animal to thrive in a wide range of conditions. One major environmental fluctuation that can occur rapidly or over a long period of time is temperature. Teleost fish, such as the rainbow trout (Oncorhynchus mykiss) are ectothermic, meaning their body temperature is regulated by environmental tem...

  20. Does Masking Matter? Shipping Noise and Fish Vocalizations.

    Neenan, Sarah T V; Piper, Rayner; White, Paul R; Kemp, Paul; Leighton, Timothy G; Shaw, Peter J

    2016-01-01

    Shipping creates large near-field background noises at levels similar to or higher than fish vocalizations and in the same critical bandwidths. This noise has the potential to "mask" biologically important signals and prevent fish from hearing them; any interference with the detection and recognition of sounds may impact fish survival. The Lombard effect, whereby vocalizations are altered to reduce or exclude masking effects, is an adaptation that has been observed in mammals and birds. Research is needed to establish whether the Lombard effect occurs in fish to gain a better understanding of the implications of noise pollution on fish populations. PMID:26611028

  1. Fishing amplifies forage fish population collapses

    Essington, Timothy E.; Moriarty, Pamela E.; Froehlich, Halley E.; Hodgson, Emma E.; Koehn, Laura E.; Oken, Kiva L.; Siple, Margaret C.; Stawitz, Christine C.

    2015-01-01

    Forage fish support the largest fisheries in the world but also play key roles in marine food webs by transferring energy from plankton to upper trophic-level predators, such as large fish, seabirds, and marine mammals. Fishing can, thereby, have far reaching consequences on marine food webs unless safeguards are in place to avoid depleting forage fish to dangerously low levels, where dependent predators are most vulnerable. However, disentangling the contributions of fishing vs. natural processes on population dynamics has been difficult because of the sensitivity of these stocks to environmental conditions. Here, we overcome this difficulty by collating population time series for forage fish populations that account for nearly two-thirds of global catch of forage fish to identify the fingerprint of fisheries on their population dynamics. Forage fish population collapses shared a set of common and unique characteristics: high fishing pressure for several years before collapse, a sharp drop in natural population productivity, and a lagged response to reduce fishing pressure. Lagged response to natural productivity declines can sharply amplify the magnitude of naturally occurring population fluctuations. Finally, we show that the magnitude and frequency of collapses are greater than expected from natural productivity characteristics and therefore, likely attributed to fishing. The durations of collapses, however, were not different from those expected based on natural productivity shifts. A risk-based management scheme that reduces fishing when populations become scarce would protect forage fish and their predators from collapse with little effect on long-term average catches. PMID:25848018

  2. Sport Fishing Regulations

    US Fish and Wildlife Service, Department of the Interior — The regulations for sport fishing on St. Vincent National Wildlife Refuge are outlined in this document. Fishing is only permitted from sunrise to sunset, and only...

  3. Got a Sick Fish?

    ... Welfare Veterinary Careers Public Health Got a sick fish? Fish with disease can show a variety of signs. If you notice your pet fish having any unusual disease signs, contact your veterinarian ...

  4. Fish tapeworm infection

    Fish tapeworm infection is an intestinal infection with the tapeworm parasite found in fish. ... The fish tapeworm ( Diphyllobothrium latum ) is the largest parasite that infects humans. Humans become infected when they eat raw ...

  5. Environmentally induced physiological responses that determine fish survival and distribution: a review

    Odunze, F.C.

    2005-01-01

    Limitation to an aqueous habitat is the most fundamental physiological constraint imposed upon fish, phrases such as 'like a fish of water', convey our acceptance of the general unsuitability of fish for terrestrial existence. The constraints that restrict fish to an aquatic habitat relate to respiration, acid-base regulation, nitrogenous excretion, water balance and ionic regulation. A fish not adapted for an amphibious lifestyle when removed from water, becomes hypoxic and hypercapnic and s...

  6. Fish Manoeuvres and Morphology

    Singh, Kiran; Pedley, Timothy

    2008-11-01

    The extraordinary manoeuvrability observed in many fish is attributed to their inherent flexibility, which might be enhanced by the use of appendages like fins. The aim of this work is to understand the role of morphological adaptations, such as body shape and deployment of median fins, on manoeuvrability and internal body dynamics. The 3d vortex lattice numerical method was employed to analyse the hydrodynamics for arbitrary body planforms of infinitesimal thickness. The internal structure of the body due to the combined skeletal system and soft tissue, is represented as an active Euler-Bernoulli beam, in which the time-dependent bending moment distribution is calculated from body inertia and the hydrodynamic pressure difference across the body. C-turns are the manoeuvre of choice for this work and the response for three different species of fish are examined. Angelfish(Pterophyllum eimekei), pike (Esox sp) and tuna (Thunnus albacares) were chosen for their differences in body profile, median fin use and manoeuvrability. Net direction change and bending moment response to prescribed backbone flexure are calculated and used to interpret the influence of body profile on manoeuvrability and muscle work done. Internal stresses may be computed from anatomical data on muscle fibre distribution and recruitment. To the future, it is intended to extend this work to other typical manoeuvres, such as fast starts for which muscle activation patterns have been measured quite widely.

  7. Consumer beliefs regarding farmed versus wild fish.

    Claret, Anna; Guerrero, Luis; Ginés, Rafael; Grau, Amàlia; Hernández, M Dolores; Aguirre, Enaitz; Peleteiro, José Benito; Fernández-Pato, Carlos; Rodríguez-Rodríguez, Carmen

    2014-08-01

    Aquaculture is a food-producing activity, alternative to traditional extractive fishing, which still acts as a reference for most consumers. The main objective of the present paper was to study which consumer beliefs, regarding farmed versus wild fish, hinder the potential development of the aquaculture sector. To achieve this purpose the study was organized into two complementary steps: a qualitative approach (focus groups) aimed at assessing consumer perception about wild and farmed fish and to identify the salient beliefs that differentiate them; and a quantitative approach (survey by means of a questionnaire) to validate the results obtained in the focus group discussions over a representative sample of participants (n = 919). Results showed that participants perceive clear differences between farmed and wild fish. Although no significant differences between both kinds of fish were detected on safety, in general farmed fish was perceived to be less affected by marine pollution, heavy metals and parasites. In the contrary, wild fish was considered to have healthier feeding, to contain fewer antibiotics and to be fresher, healthier, less handled and more natural. Beliefs related to quality were in favour of wild fish, while those related to availability and price were in favour of farmed fish. Significant differences were observed in the perception of both kinds of fish depending on the consumers' objective knowledge about fish, on the level of education, age and gender and on the three segments of consumers identified: "Traditional/Conservative", "Connoisseur", "Open to aquaculture". The results provided could play an important role when planning and designing efficient marketing strategies for promoting farmed fish by adapting the information provided to the perception of each segment of consumers identified by the present study. PMID:24709486

  8. Insight on how fishing bats discern prey and adjust their mechanic and sensorial features during the attack sequence

    Ostaizka Aizpurua; Antton Alberdi; Joxerra Aihartza; Inazio Garin

    2015-01-01

    Several insectivorous bats have included fish in their diet, yet little is known about the processes underlying this trophic shift. We performed three field experiments with wild fishing bats to address how they manage to discern fish from insects and adapt their hunting technique to capture fish. We show that bats react only to targets protruding above the water and discern fish from insects based on prey disappearance patterns. Stationary fish trigger short and shallow dips and a terminal e...

  9. Fish welfare: Fish capacity to experience pain

    Vučinić Marijana

    2009-01-01

    Full Text Available Teleost fish possess similar nociceptive processing systems to those found in terrestrial vertebrates. It means that they react to potential painful stimuli in a similar manner as mammals and birds. However, the welfare of fish has been the focus of less research than that of higher vertebrates. Humans may affect the welfare of fish through fisheries, aquaculture and a number of other activities. There is scientific evidence to support the assumption that fish have the capacity to experience pain because they possess functional nociceptors, endogenous opioids and opioid receptors, brain structures involved in pain processing and pathways leading from nociceptors to higher brain structures. Also, it is well documented that some anaesthetics and analgesics may reduce nociceptive responses in fish. Behavioural indicators in fish such as lip-rubbing and rocking behaviours are the best proof that fish react to potential painful stimuli. This paper is an overview of some scientific evidence on fish capacity to experience pain.

  10. Fish for Feed vs Fish for Food

    Allan, Geoff L.

    2004-01-01

    Aquaculture is the fastest-growing food producing industry sector in the world. Demand for feed ingredients, particularly for preferred protein sources such as fishmeal, fish oil and ‘trash fish’, has also increased, raising questions about sustainability and uses of fish for aquaculture feeds or directly as human food. Approximately 30 million metric tonnes (MMT) of fish from capture fisheries are used each year to produce fishmeal and fish oil. The species used are not usually consumed dire...

  11. No Fishing Now,More Fish Later

    2011-01-01

    Fishing ban for ecological purposes starts on the Pearl River Since April1,a two-month ban on fishing has been imposed on the Pearl River valley in south China.It is the first fishing ban in this area with the purpose of preserving biodiversity in China’s third longest

  12. Fishing Fish Stem Cells and Nuclear Transplants

    Yunhan Hong

    2011-01-01

    Fish has been the subject of various research fields, ranging from ecology, evolution, physiology and toxicology to aquaculture. In the past decades fish has attracted considerable attention for functional genomics, cancer biology and developmental genetics, in particular nuclear transfer for understanding of cytoplasmic-nuclear relationship. This special issue reports on recent progress made in fish stem cells and nuclear transfer.

  13. Adaptive Lighting

    Petersen, Kjell Yngve; Søndergaard, Karin; Kongshaug, Jesper

    2015-01-01

    Adaptive LightingAdaptive lighting is based on a partial automation of the possibilities to adjust the colour tone and brightness levels of light in order to adapt to people’s needs and desires. IT support is key to the technical developments that afford adaptive control systems. The possibilities offered by adaptive lighting control are created by the ways that the system components, the network and data flow can be coordinated through software so that the dynamic variations are controlled i...

  14. Plastic fish

    Antonella Del Rosso

    2015-01-01

    In terms of weight, the plastic pollution in the world’s oceans is estimated to be around 300,000 tonnes. This plastic comes from both land-based and ocean-based sources. A lecture at CERN by chemist Wolfgang Trettnak addressed this issue and highlighted the role of art in raising people’s awareness.   Artwork by Wolfgang Trettnak. Packaging materials, consumer goods (shoes, kids’ toys, etc.), leftovers from fishing and aquaculture activities… our oceans and beaches are full of plastic litter. Most of the debris from beaches is plastic bottles. “PET bottles have high durability and stability,” explains Wolfgang Trettnak, a chemist by education and artist from Austria, who gave a lecture on this topic organised by the Staff Association at CERN on 26 May. “PET degrades very slowly and the estimated lifetime of a bottle is 450 years.” In addition to the beach litter accumulated from human use, rivers bring several ki...

  15. Overview of fish immune system and infectious diseases

    A brief overview of the fish immune system and the emerging or re-emerging bacterial, viral, parasitic and fungal diseases considered to currently have a negative impact on aquaculture is presented. The fish immune system has evolved with both innate (natural resistance) and adaptive (acquired) immu...

  16. Seasonal variability of morphospaces in a subtropical fish assemblage

    Carolina Correia Siliprandi; Antoni Lombarte

    2015-01-01

    Morphological characters of fishes are essential to evaluate the functional structure of assemblages, being morphological differences indicative of distinct ecological and adaptive strategies. The ecomorphology using morphospaces analyzes the structure of a fish assemblage through the values of intervals between homologous points positioned in anatomical structures of organisms phylogenetically related. These intervals can be quantified by morphogeometric and multivariate analyses. Seasonally...

  17. Power stations and fish

    Some of the interactions of the CEGB's activities with aquatic life are outlined, and current research is highlighted. Fish impingement and entrainment, their significance, and the possible benefits of reducing fish ingress are discussed. The effect on fish of thermal discharges and the use of heated effluents for fish culture are considered. (author)

  18. Meet the surrogate fish

    This article gives details of the US Department of Energy's innovative research into the development of a sensor system that will work as a surrogate fish to provide information to aid the design of fish-friendly turbines for hydroelectric power plants. The selection of the dams for the testing of sensor fish, the release and recovery of the sensor fish, the recording of the physical forces exerted on fish as they pass through the turbines, and use of the information gathered to build more sensor fish are discussed. Fish investigations conducted at the Pacific Northwest National Laboratory are briefly described. (UK)

  19. Three Kinds of Fish

    Høst, Jeppe Engset

    2012-01-01

    There are three kinds of fish. Fish you were given, fish you bought and fish you lease. This might sound a bit odd, but it is nevertheless the basis for the activities of Danish commercial fishers since the introduction of transferable fishing concessions (TFCs) in 2007. In the current 2012 reform...... of market based systems are wild speculation, concentration and monopolization of fishing access and subsequent leasing with fishing communities and new entrants very likely being worse off (see for example the chapter “From fishing rights to financial derivatives” is this volume or Olson 2011; Sumaila 2010...... will examine five Danish fishing operations and discuss how they have reacted in different ways to the newly introduced system of transferable fishing concessions. By introducing TFCs as a solution to fleet overcapacity, the EU Commission will also be introducing a system where buying, selling and leasing...

  20. Fish barriers

    In addition to literature reviews laboratory experiments with both strobe light and different kinds of sound stimuli were carried out. In the experiments silver eel, brown trout, arctic char and salmon smolts were tested. The experiments showed that in darkness silver eel avoided strobe light with intensities between 0.4 and 8.7 lux with 80-90% avoidance in 8.7 lux. The avoidance reactions decreased when background light was raised to 9 lux. Brown trout did not show as strong avoidance reactions possibly due to aggressive behaviour between different individuals of brown trout. The avoidance reaction was however more pronounced in dim background lift with an intensity of 5 lux than in darkness. The experiments also showed that the avoidance reactions started within a few seconds after exposure to strobe light. The frequencies 6.0 and 15 Hz were more effective as triggers of avoidance reactions than were the frequencies 2.1 and 160 Hz. Arctic char did not show any avoidance reactions to strobe light. It was actually attracted to strobe light with the frequency 160 Hz in total darkness and indifferent in dim background light 10 lux. Experiments in running water also showed that salmon smolts could be diverted from an area exposed to strobe light with the frequency 15.0 Hz. The effect was more pronounced in darkness than in dim background light and also more pronounced when water current was 20 cm/s than when it was 40 or 60 cm/s. Experiments to test the avoidance reactions to sound was also performed. The evaluation of these results where however complicated by the fact that the fishes swam rapidly to and fro in the experimental chamber and thus by pure chance very frequently were close to the sound generator

  1. Adaptive skills

    Staša Stropnik; Jana Kodrič

    2013-01-01

    Adaptive skills are defined as a collection of conceptual, social and practical skills that are learned by people in order to function in their everyday lives. They include an individual's ability to adapt to and manage her or his surroundings to effectively function and meet social or community expectations. Good adaptive skills promote individual's independence in different environments, whereas poorly developed adaptive skills are connected to individual's dependency and with g...

  2. Adaptive Lighting

    Petersen, Kjell Yngve; Søndergaard, Karin; Kongshaug, Jesper

    2015-01-01

    Adaptive Lighting Adaptive lighting is based on a partial automation of the possibilities to adjust the colour tone and brightness levels of light in order to adapt to people’s needs and desires. IT support is key to the technical developments that afford adaptive control systems. The possibilities...... offered by adaptive lighting control are created by the ways that the system components, the network and data flow can be coordinated through software so that the dynamic variations are controlled in ways that meaningfully adapt according to people’s situations and design intentions. This book discusses...... distributed differently into an architectural body. We also examine what might occur when light is dynamic and able to change colour, intensity and direction, and when it is adaptive and can be brought into interaction with its surroundings. In short, what happens to an architectural space when artificial...

  3. Fish Surgery: Presurgical Preparation and Common Surgical Procedures.

    Sladky, Kurt K; Clarke, Elsburgh O

    2016-01-01

    Fish surgical procedures are commonplace in aquaria, zoos, laboratory facilities, and pet clinical practice. To incorporate fish surgery into a clinical setting, an understanding of anatomic differences between mammals and fish, bath anesthetics, and recirculating anesthesia techniques must be developed; a system or different size systems to accommodate anesthesia and surgery of particular species of concern at an institution or practice constructed; and familiar mammalian surgical principles applied with some adaptations. Common surgical procedures in fish include coeliotomy for intracoelomic mass removal, reproductive procedures, gastrointestinal foreign body removal, radiotransmitter placement, and integumentary mass excision. PMID:26611924

  4. Compatibility Determination : Recreational Fishing

    US Fish and Wildlife Service, Department of the Interior — It is determined in this document that recreational fishing of bass and brim on St. Vincent National Wildlife Refuge is consistent with Refuge Objectives. The...

  5. Umatilla - Rough Fish Eradication

    US Fish and Wildlife Service, Department of the Interior — In order to enhance environmental conditions in the McCormack Slough on Umatilla NWR, the population of rough fish, including common carp (Cyprinus carpio) and...

  6. Poisoning - fish and shellfish

    Fish poisoning; Dinoflagellate poisoning; Seafood contamination; Paralytic shellfish poisoning; Ciguatera poisoning ... algae and algae-like organisms called dinoflagellates. Small fish that eat the algae become contaminated. If larger ...

  7. Scorpion fish sting

    ... page: //medlineplus.gov/ency/article/002849.htm Scorpion fish sting To use the sharing features on this page, please enable JavaScript. Scorpion fish are members of the family Scorpaenidae, which includes ...

  8. Alaskan sport fishing waters

    US Fish and Wildlife Service, Department of the Interior — As a guide to newcomers and visitors, fishery biologists have compiled a list of some of the well-known fishing waters in Alaska. The list is merely a starting...

  9. Adaptive Lighting

    Petersen, Kjell Yngve; Søndergaard, Karin; Kongshaug, Jesper

    2015-01-01

    Adaptive Lighting Adaptive lighting is based on a partial automation of the possibilities to adjust the colour tone and brightness levels of light in order to adapt to people’s needs and desires. IT support is key to the technical developments that afford adaptive control systems. The possibilities...... offered by adaptive lighting control are created by the ways that the system components, the network and data flow can be coordinated through software so that the dynamic variations are controlled in ways that meaningfully adapt according to people’s situations and design intentions. This book discusses...... the investigations of lighting scenarios carried out in two test installations: White Cube and White Box. The test installations are discussed as large-scale experiential instruments. In these test installations we examine what could potentially occur when light using LED technology is integrated and...

  10. 49 CFR 173.218 - Fish meal or fish scrap.

    2010-10-01

    ... 49 Transportation 2 2010-10-01 2010-10-01 false Fish meal or fish scrap. 173.218 Section 173.218... Fish meal or fish scrap. (a) Except as provided in Column (7) of the HMT in § 172.101 of this subchapter, fish meal or fish scrap, containing at least 6%, but not more than 12% water, is authorized...

  11. Fish Health Management

    For commercial success, a recirculating aquaculture operation must maintain fish at densities far greater than normally found in nature. At the same time, the producer must maintain an environment that supports good fish health. This chapter discusses various aspects of fish health management, inclu...

  12. Ciguatera fish poisoning

    J. Crump; McLay, C.; Chambers, S.

    1999-01-01

    Ciguatera fish poisoning is one of a variety of non-bacterial forms of human seafood poisoning. Consuming large predatory fish from tropical reef ecosystems may be hazardous. We describe a case that is typical of the disease, and illustrates the persistence of neurological symptoms that occur in some patients.


Keywords: ciguatera fish poisoning; ichthyosarcotoxaemia; poisoning; biotoxins

  13. Adaptive skills

    Staša Stropnik

    2013-02-01

    Full Text Available Adaptive skills are defined as a collection of conceptual, social and practical skills that are learned by people in order to function in their everyday lives. They include an individual's ability to adapt to and manage her or his surroundings to effectively function and meet social or community expectations. Good adaptive skills promote individual's independence in different environments, whereas poorly developed adaptive skills are connected to individual's dependency and with greater need for control and help with everyday tasks. Assessment of adaptive skills is often connected to assessment of intellectual disability, due to the reason that the diagnosis of intellectual disability includes lower levels of achievements on standardized tests of intellectual abilities as well as important deficits in adaptive skills. Assessment of adaptive behavior is a part of standard assessment battery with children and adults with different problems, disorders or disabilities that affect their everyday functioning. This contribution also presents psychometric tools most regularly used for assessment of adaptive skills and characteristics of adaptive skills with individual clinical groups.

  14. ADAPT Dataset

    National Aeronautics and Space Administration — Advanced Diagnostics and Prognostics Testbed (ADAPT) Project Lead: Scott Poll Subject Fault diagnosis in electrical power systems Description The Advanced...

  15. Do Fish Resist?

    Dinesh Joseph Wadiwel

    2016-03-01

    Full Text Available There have been a number of scientific studies on the question of whether fish feel pain. Some have suggested that some fish indeed do feel pain and that this has significant welfare implications (2003. Others have argued that fish do not have the brain development necessary to feel pain. In terms of number of animals killed, the slaughter of sea animals for human consumption significantly exceeds that of any land animals that we use for food, and sea animal slaughter practices frequently lack any basic welfare protections. If fish can be shown to feel pain—or more importantly, if humans can agree that fish feel pain—then this would place a significant question mark over many contemporary fishing practices.  This article substitutes the question 'Do Fish Feel Pain?' with an alternative: 'Do Fish Resist?' It explores the conceptual problems of understanding fish resistance, and the politics of epistemology that surrounds and seeks to develop a conceptual framework for understanding fish resistance to human capture by exploring the development of fishing technologies - the hook, the net and contemporary aquaculture.

  16. Augmented fish health monitoring

    The Bonneville Power Administration (BPA) initiated the Augmented Fish Health Monitoring project in 1986. This project was a five year interagency project involving fish rearing agencies in the Columbia Basin. Historically, all agencies involved with fish health in the Columbia Basin were conducting various levels of fish health monitoring, pathogen screening and collection. The goals of this project were; to identify, develop and implement a standardized level of fish health methodologies, develop a common data collection and reporting format in the area of artificial production, evaluate and monitor water quality, improve communications between agencies and provide annual evaluation of fish health information for production of healthier smolts. This completion report will contain a project evaluation, review of the goals of the project, evaluation of the specific fish health analyses, an overview of highlights of the project and concluding remarks. 8 refs., 1 fig., 4 tabs

  17. Transcriptomics and comparative analysis of three antarctic notothenioid fishes.

    Seung Chul Shin

    Full Text Available For the past 10 to 13 million years, Antarctic notothenioid fish have undergone extraordinary periods of evolution and have adapted to a cold and highly oxygenated Antarctic marine environment. While these species are considered an attractive model with which to study physiology and evolutionary adaptation, they are poorly characterized at the molecular level, and sequence information is lacking. The transcriptomes of the Antarctic fishes Notothenia coriiceps, Chaenocephalus aceratus, and Pleuragramma antarcticum were obtained by 454 FLX Titanium sequencing of a normalized cDNA library. More than 1,900,000 reads were assembled in a total of 71,539 contigs. Overall, 40% of the contigs were annotated based on similarity to known protein or nucleotide sequences, and more than 50% of the predicted transcripts were validated as full-length or putative full-length cDNAs. These three Antarctic fishes shared 663 genes expressed in the brain and 1,557 genes expressed in the liver. In addition, these cold-adapted fish expressed more Ub-conjugated proteins compared to temperate fish; Ub-conjugated proteins are involved in maintaining proteins in their native state in the cold and thermally stable Antarctic environments. Our transcriptome analysis of Antarctic notothenioid fish provides an archive for future studies in molecular mechanisms of fundamental genetic questions, and can be used in evolution studies comparing other fish.

  18. Adaptive Management of Renewable Resources

    Walters, C. J.

    1986-01-01

    The author challenges the traditional approach to dealing with uncertainty in the management of such renewable resources as fish and wildlife. He argues that scientific understanding will come from the experience of management as an ongoing, adaptive, and experimental process, rather than through basic research or the development of ecological theory. The opening chapters review approaches to formulating management objectives as well as models for understanding how policy choices affect ...

  19. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.

    Pasquier, Jeremy; Cabau, Cédric; Nguyen, Thaovi; Jouanno, Elodie; Severac, Dany; Braasch, Ingo; Journot, Laurent; Pontarotti, Pierre; Klopp, Christophe; Postlethwait, John H; Guiguen, Yann; Bobe, Julien

    2016-01-01

    With more than 30,000 species, ray-finned fish represent approximately half of vertebrates. The evolution of ray-finned fish was impacted by several whole genome duplication (WGD) events including a teleost-specific WGD event (TGD) that occurred at the root of the teleost lineage about 350 million years ago (Mya) and more recent WGD events in salmonids, carps, suckers and others. In plants and animals, WGD events are associated with adaptive radiations and evolutionary innovations. WGD-spurred innovation may be especially relevant in the case of teleost fish, which colonized a wide diversity of habitats on earth, including many extreme environments. Fish biodiversity, the use of fish models for human medicine and ecological studies, and the importance of fish in human nutrition, fuel an important need for the characterization of gene expression repertoires and corresponding evolutionary histories of ray-finned fish genes. To this aim, we performed transcriptome analyses and developed the PhyloFish database to provide (i) de novo assembled gene repertoires in 23 different ray-finned fish species including two holosteans (i.e. a group that diverged from teleosts before TGD) and 21 teleosts (including six salmonids), and (ii) gene expression levels in ten different tissues and organs (and embryos for many) in the same species. This resource was generated using a common deep RNA sequencing protocol to obtain the most exhaustive gene repertoire possible in each species that allows between-species comparisons to study the evolution of gene expression in different lineages. The PhyloFish database described here can be accessed and searched using RNAbrowse, a simple and efficient solution to give access to RNA-seq de novo assembled transcripts. PMID:27189481

  20. American Samoa ESI: FISH (Fish Polygons)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains sensitive biological resource data for reef, pelagic, benthic, and estuarine fish species in American Samoa. Vector polygons in this data set...

  1. Southeast Alaska ESI: FISH (Fish Polygons)

    National Oceanic and Atmospheric Administration, Department of Commerce — This data set contains biological resource data for estuarine, benthic, and pelagic fish in Southeast Alaska. Vector polygons in this data set represent locations...

  2. Fish elevator and method of elevating fish

    Truebe, Jonathan; Drooker, Michael S.

    1984-01-01

    A means and method for transporting fish from a lower body of water to a higher body of water. The means comprises a tubular lock with a gated entrance below the level of the lower body of water through which fish may enter the lock and a discharge passage above the level of the upper body of water. The fish raising means in the lock is a crowder pulled upward by a surface float as water from the upper body of water gravitationally flows into the closed lock filling it to the level of the upper body. Water is then pumped into the lock to raise the level to the discharge passage. The crowder is then caused to float upward the remaining distance through the water to the level of the discharge passage by the introduction of air into a pocket on the underside of the crowder. The fish are then automatically discharged from the lock into the discharge passage by the out of water position of the crowder. The movement of the fish into the discharge passage is aided by the continuous overflow of water still being pumped into the lock. A pipe may be connected to the discharge passage to deliver the fish to a selected location in the upper body of water.

  3. Vaccination in Fish

    Chettri, Jiwan Kumar

    vaccines have reduced the need for usage of antibiotics with more than 99 % since the 1980s. Fish can be vaccinated by three different administration routes: injection, immersion and oral vaccination. Injection vaccination (intraperitoneal injection of vaccine) is the most time consuming and labor...... intensive method, which however, provides the best protection of the fish. Immersion vaccination is used for immunization of a high number of small fish is cost-efficient and fast (30 sec immersion into vaccine). Oral vaccination (vaccine in feed) is the least efficient. As in higher vertebrates fish...... respond to vaccination by increasing the specific antibody titer and by activating the cellular responses. My talk will cover vaccination methods in fish, immune responses and some adverse effect of oil-adjuvanted vaccines in fish with reference to our work in rainbow trout, Oncorhynchus mykiss....

  4. Ambiguous Adaptation

    Møller Larsen, Marcus; Lyngsie, Jacob

    We investigate why some exchange relationships terminate prematurely. We argue that investments in informal governance structures induce premature termination in relationships already governed by formal contracts. The formalized adaptive behavior of formal governance structures and the flexible and...... reciprocal adaptation of informal governance structure create ambiguity in situations of contingencies, which, subsequently, increases the likelihood of premature relationship termination. Using a large sample of exchange relationships in the global service provider industry, we find support for a hypothesis...

  5. Strategic Adaptation

    Andersen, Torben Juul

    2015-01-01

    This article provides an overview of theoretical contributions that have influenced the discourse around strategic adaptation including contingency perspectives, strategic fit reasoning, decision structure, information processing, corporate entrepreneurship, and strategy process. The related...... concepts of strategic renewal, dynamic managerial capabilities, dynamic capabilities, and strategic response capabilities are discussed and contextualized against strategic responsiveness. The insights derived from this article are used to outline the contours of a dynamic process of strategic adaptation...

  6. Temperature effects on vaccine induced immunity to viruses in fish

    Lorenzen, Niels; Lorenzen, Ellen; Rasmussen, Jesper Skou; Christensen, Mikkel Black; Einer-Jensen, Katja; Veselý, T.; Poroková, D.

    Abstract In poikilothemic vertebrates such as teleost fishes, temperature affects all physiological processes including host-pathogen interactions like immune response and propagation of infection. Whether an infection with a pathogenic virus in fish results in development of clinical disease often...... depends on the balance between virus multiplication and anti viral immune reactions in the host. Water temperature is one of the most important factors influencing the balance between the fish and its environment. Usually, an optimal immune response of a particular fish species is obtained at its normal...... summer temperature whereas low temperatures may be immunosuppressive. Although innate and adaptive immune response mechanisms should be considered as integrated parts of the immunedefence, low temperatures appears to affect (inhibit) adaptive mechanisms more than innate mechanisms. This might represent a...

  7. A Study of Ecological Conducts under Cultural Adaption: A Case Study of Construction of Fish Ponds in Huanggang Dong Community of Guizhou%文化适应下的生态行为研究——以贵州黄岗侗族社区的鱼塘建构为例

    彭书佳

    2012-01-01

    in the process of cultural adaptation, any kind of culture has the functions of creating and maintaining. To one nation, regardless of its size, it has its own living space on the surface of the earth. Meanwhile, the natural features of this unique living space constitute this nation's natural hving environment. For Dong people in Huanggang, which is an area not suitable for an artificial habitat change, after a long period of exploration, through man - made means of changing the fiver courses and digging fish ponds, it helped to reserve resources from the fish ponds. At the same time, it has fully verified Dong people's ecological wisdom when dealing with the relationship properly between resources and environment.%在文化适应的过程中,任何一种文化都具有其创造性与保持性。对一个民族来说,它在地球表面上必有其自己的生存发展空间,这片特有空间的自然特性就构成了该民族的自然生存环境。黄岗侗族人民在一个地表崎岖不平、人为改变生存环境困难的地区,经过长期的探索,通过人工手段改变河道、挖掘鱼塘,并使得建构的鱼塘得到了精心的维护,这其间充分验证了侗族人民正确协调资源与环境之间关系的生态智慧。

  8. Fish protein hydrolysates

    Mackie, I.M.

    1982-01-01

    Proteolytic enzymes now available in commercial quantities can be used to liquefy the fish and fish waste presently considered suitable for conversion to fish meal. The products obtained are readily dispersed or dissolved in water and have a high nutritional value. They have been satisfactorily used as substitutes for milk proteins in milk replacers for young animals. Further research is necessary on means of controlling the degree of hydrolysis to give protein preparations with acceptable functional properties as human food supplements. (Refs. 21).

  9. Fish and wildlife surveillance

    This section of the 1994 Hanford Site Environmental Report summarizes the monitoring of radioactive contaminants in fish and wildlife species that inhabit the Colombia River and Hanford Site. Wildlife have access to areas of the Site containing radioactive contamination, and fish can be exposed to contamination in spring water entering the river along the shoreline. Therefore, samples are collected at various locations annually, generally during the hunting or fishing season, for selected species

  10. Fish and wildlife surveillance

    Poston, T.M.

    1995-06-01

    This section of the 1994 Hanford Site Environmental Report summarizes the monitoring of radioactive contaminants in fish and wildlife species that inhabit the Colombia River and Hanford Site. Wildlife have access to areas of the Site containing radioactive contamination, and fish can be exposed to contamination in spring water entering the river along the shoreline. Therefore, samples are collected at various locations annually, generally during the hunting or fishing season, for selected species.

  11. Social learning in fish producers' organizations: how fishers perceive their membership experience and what they learn from it

    V Karadzic; J. Grin; P. Antunes; M Banovic

    2014-01-01

    Fish producers' organizations (POs) bring together fishers or fish farmers on a voluntary basis so as to ensure the best market conditions for their fish. How fishers perceive and understand their membership Experience is crucial to their capacity to learn from each other and adapt when interacting

  12. Intelligent Fish Freshness Assessment

    Deena Benjamin

    2008-04-01

    Full Text Available Fish species identification and automated fish freshness assessment play important roles in fishery industry applications. This paper describes a method based on support vector machines (SVMs to improve the performance of fish identification systems. The result is used for the assessment of fish freshness using artificial neural network (ANN. Identification of the fish species involves processing of the images of fish. The most efficient features were extracted and combined with the down-sampled version of the images to create a 1D input vector. Max-Win algorithm applied to the SVM-based classifiers has enhanced the reliability of sorting to 96.46%. The realisation of Cyranose 320 Electronic nose (E-nose, in order to evaluate the fish freshness in real-time, is experimented. Intelligent processing of the sensor patterns involves the use of a dedicated ANN for each species under study. The best estimation of freshness was provided by the most sensitive sensors. Data was collected from four selected species of fishes over a period of ten days. It was concluded that the performance can be increased using individual trained ANN for each specie. The proposed system has been successful in identifying the number of days after catching the fish with an accuracy of up to 91%.

  13. Of Fish and Micrornas

    Bela-Ong, Dennis; Schyth, Brian Dall; Lorenzen, Niels

    Fish is an important small vertebrate multidisciplinary model for investigating various aspects of reproduction, development, disease (immunology, toxicology, carcinogenesis), and aging. It is also an important model for comparative and evolutionary studies because it represents the lower...... to the mechanisms of control of gene expression, impacting a broad range of biological processes. Thus far, >25, 000 miRNA sequences have been identified in 193 species, including fish. In fish, the interest on miRNAs started with the analysis of their expression and function during embryonic development. In our...... selection markers to identify disease-resistant fish....

  14. Is adaptation. Truly an adaptation? Is adaptation. Truly an adaptation?

    Thais Flores Nogueira Diniz

    2008-04-01

    Full Text Available The article begins by historicizing film adaptation from the arrival of cinema, pointing out the many theoretical approaches under which the process has been seen: from the concept of “the same story told in a different medium” to a comprehensible definition such as “the process through which works can be transformed, forming an intersection of textual surfaces, quotations, conflations and inversions of other texts”. To illustrate this new concept, the article discusses Spike Jonze’s film Adaptation. according to James Naremore’s proposal which considers the study of adaptation as part of a general theory of repetition, joined with the study of recycling, remaking, and every form of retelling. The film deals with the attempt by the scriptwriter Charles Kaufman, cast by Nicholas Cage, to adapt/translate a non-fictional book to the cinema, but ends up with a kind of film which is by no means what it intended to be: a film of action in the model of Hollywood productions. During the process of creation, Charles and his twin brother, Donald, undergo a series of adventures involving some real persons from the world of film, the author and the protagonist of the book, all of them turning into fictional characters in the film. In the film, adaptation then signifies something different from itstraditional meaning. The article begins by historicizing film adaptation from the arrival of cinema, pointing out the many theoretical approaches under which the process has been seen: from the concept of “the same story told in a different medium” to a comprehensible definition such as “the process through which works can be transformed, forming an intersection of textual surfaces, quotations, conflations and inversions of other texts”. To illustrate this new concept, the article discusses Spike Jonze’s film Adaptation. according to James Naremore’s proposal which considers the study of adaptation as part of a general theory of repetition

  15. Artificial Fish School Algorithm Applied in a Combinatorial Optimization Problem

    Yun Cai

    2010-01-01

    An improved artificial fish swarm algorithm (AFSA) for solving a combinatorial optimization problem—a berth allocation problem (BAP), which was formulated. Its objective is to minimize the turnaround time of vessels at container terminals so as to improve operation efficiency customer satisfaction. An adaptive artificial fish swarm algorithm was proposed to solve it. Firstly, the basic principle and the algorithm design of the AFSA were introduced. Then, for a test case, computational experim...

  16. La pisciculture des Pangasiidae = Fish farming of Pangasiids

    Lazard, J.; Cacot, P.; Slembrouck, Jacques; Legendre, Marc

    2009-01-01

    For the last 15 years South East Asian fish farming of Pangasiids has shown dramatic growth and expansion. A main contributor in this field, Vietnam is the perfect example of a country having displayed a dynamics combining technical improvement derived from development oriented research, adaptability of culture systems and targeting of international markets. In Indonesia, following the example of Vietnam, fish farming of pangas catfish is developing too since a few years for both domestic and...

  17. Coping styles in farmed fish: consequences for aquaculture

    Castanheira, Maria Filipa; Conceição, Luís E.C.; Millot, Sandie; Rey, Stephanie; Bégout , Marie-Laure; Damsgård, Børge; Kristiansen, Tove; Höglund, Erik; Øverli, Øyvind; Martins, Catarina I. M.

    2015-01-01

    Individual differences in physiological and behavioural responses to stressors are increasingly recognised as adaptive variation and thus raw material for evolution and fish farming improvements including selective breeding. Such individual variation has been evolutionarily conserved and is present in all vertebrate taxa including fish. In farmed animals, the interest in consistent trait associations, that is coping styles, has increased dramatically over the last years because many studies h...

  18. Essential Fish Habitat (EFH) Areas Protected From Fishing

    National Oceanic and Atmospheric Administration, Department of Commerce — Designated Essential Fish Habitat (EFH) areas where fishing or the use of fishing gears has been restricted or modified in order to minimize the adverse effects of...

  19. Fish silage as feed ingredient for fish and livestock

    Rurangwa, E.; Vuuren, van, T.; Poelman, M.

    2014-01-01

    The present report analyses through a literature review the potential of fish silage to valorise fish processing by-products into economically relevant protein sources for fish and livestock feed production in East Africa.

  20. Copepods and fishes in the Brazilian Amazon

    Thatcher, Vernon E.

    1998-06-01

    The Amazon basin comprises the largest river ecosystem in the world (7 million km 2) with annual high and low water peaks and a constant temperature near 29°C. Some 2000 fish species and 40 species of free-living copepods are known to occur in Amazonia. The free-living forms serve as food for most larval fishes and some adults, but they also transmit several parasites including representatives of the nematode family Camallanidae. About three dozen species of parasitic copepods have been described from the Brazilian Amazon. Females of Amazonian parasitic copepods are found on skin, gill filaments, gill rakers or within the nasal fossae. Parasitic copepods are found on fishes that are from a few millimeters long up to those over 2 m in length and they are usually quite host specific. All have body pigmentation in different patterns and colors (frequently blues, such as cerulean, cobalt, spectrum, smalt or campanula). It is suggested that the coloration serves to attract specific host fish. Copepods have evolved adaptations for attachment and feeding, especially in the second antennae and endopods. Examples of progenesis, phoresis and commensalism are shown. Some species produce pathology such as a tourniquet effect, hyperplasia, blood loss and anemia, and can kill fishes by limiting their respiration.

  1. RNA FISH, DNA FISH and Chromosome Painting of Chicken Oocytes.

    Guioli, Silvana; Lovell-Badge, Robin

    2016-01-01

    Fluorescence in situ hybridization (FISH) is a molecular cytogenetic technique. It identifies the location of DNA loci and RNAs, including nascent RNAs in the process of being transcribed, within individual cells. Great advances in fluorescent dye technology and technique sensitivity, combined with developments in light microscopy and imaging software have made it widely accessible and have expanded the range of applications in basic research as well as in diagnostics. Being able to perform RNA hybridization, DNA hybridization, and protein immunofluorescence consecutively on the same sample is an invaluable tool to study RNA expression in relation to their gene loci and to map RNA and DNA in relation to nuclear or cellular structures. This has contributed to enormous progress in understanding basal mechanisms of male and female meiosis in different animal model systems. In this chapter we describe in detail the protocols for FISH based techniques applied to study gene expression dynamics and nuclear architecture of chicken oocytes during meiotic prophase I. These techniques can be easily performed in any molecular and cell biology laboratory and be adapted to different systems and to different phases of gametogenesis. PMID:27557582

  2. Fish Vaccines in Aquaculture

    Vaccination is a proven, cost-effective method to prevent infectious diseases in animals. Current fish vaccines can be categorized as killed fish vaccines or modified live vaccines. The major advantage of live vaccine is their ability to stimulate both cell-mediated and humoral immune responses for ...

  3. Stress in Fish

    Stress in fish involves a condition disruptive of physiological homeostasis that occurs in response to unfavorable external influences and is capable of adversely affecting fish. Any stimulus that provokes stress responses is known as a stressor, disrupting a stable condition and causing a response....

  4. Robot Global Path Planning Based on Improved Artificial Fish-Swarm Algorithm

    Jiansheng Peng

    2013-02-01

    Full Text Available In This study, a new artificial fish-swarm optimization, to improve the foraging behavior of artificial fish swarm algorithm is closer to reality in order to let the fish foraging behavior, increase a look at the link (search ambient, after examining environment, artificial fish can get more status information of the surrounding environment. Artificial fish screened from the information obtained optimal state for the best direction of movement. Will improve the foraging behavior of artificial fish-swarm algorithm applied to robot global path planning, including the robot to bypass the analog obstacles selected three ways: go obstructions outside, go inside the obstacles, both away obstructions and went outside obstacles Thing achieve robot shortest path planning. Via the MATLAB software emulation test: the improved foraging behavior of artificial fish-swarm algorithm to improve the rapid convergence of the algorithm and stability, improve fish swarm algorithm to the adaptability of the robot global path planning.

  5. Biannual Fish Survey, Spring 1993

    US Fish and Wildlife Service, Department of the Interior — The biannual fish survey was initiated in 1989 to monitor population trends of federally endangered fish species at Ash Meadows National Wildlife Refuge. Item 421...

  6. Minutes of Fish Barrier Workshop

    US Fish and Wildlife Service, Department of the Interior — Minutes of Fish Barrier Workshop held 27 May 2009 at DOC Waikato Area Office. Lists attendees and highlights topics to be covered in Fish Barrier Workshop.

  7. Adaptive test

    Kjeldsen, Lars Peter; Eriksen, Mette Rose

    2010-01-01

    Artikelen er en evaluering af de adaptive tests, som blev indført i folkeskolen. Artiklen sætter særligt fokus på evaluering i folkeskolen, herunder bidrager den med vejledning til evaluering, evalueringsværktøjer og fagspecifkt evalueringsmateriale.......Artikelen er en evaluering af de adaptive tests, som blev indført i folkeskolen. Artiklen sætter særligt fokus på evaluering i folkeskolen, herunder bidrager den med vejledning til evaluering, evalueringsværktøjer og fagspecifkt evalueringsmateriale....

  8. All Fish for China?

    Villasante, Sebastián; Rodríguez-González, David; Antelo, Manel; Rivero-Rodríguez, Susana; de Santiago, José A.; Macho, Gonzalo

    2013-01-01

    In this paper we examine the effect of Gross Domestic Product (GDP) on the level of fish intake in China in comparison with the rest of the world. We also analyse the origin and destination of China’s seafood products in order to understand the main patterns during the last decades. The results show that in the 1961–2011 period the rate of growth of the GDP in China doubled that of other developing regions, while the daily fish intake of China increased fourfold, making China the largest fish...

  9. Commercial production of fish meal from fish waste

    Eyo, A.A.

    1987-01-01

    The importance of fish meal production as a means of reducing fish waste currently being experienced in the fisheries subsector is discussed. Cost estimate for Nigeria establishing a fish meal manufacturing plant and suggestions on rational execution of the project are presented. If properly located and well managed, the project will serve to convert fish waste to cash in the industrial fishery

  10. Defining, assessing and promoting the welfare of farmed fish.

    Huntingford, F A; Kadri, S

    2014-04-01

    As currently practised, the culture of fish for food potentially raises concerns about the welfare of farmed fish, and this is a topic that has received considerable attention. As vertebrates, fish share a number of features with the birds and mammals that are more commonly farmed, so many welfare principles derived from consideration of these groups may also be applied to fish. However, fish have a long, separate evolutionary history and are also adapted to a very different, aquatic environment. For these reasons, they have a number of special features that are relevant to how welfare is defined, assessed and promoted and these are discussed. The various methods that are available to researchers for identifying and assessing good and bad welfare in fish are considered, including assessment of physical health and physiological, behavioural and genomic status. The subset of practical welfare indicators that can be used on working farms is also reviewed. Various aspects of intensive aquaculture that can potentially compromise fish welfare are outlined, as are some strategies available for mitigating such adverse effects. Finally, the paper ends by looking briefly to the future, identifying likely changes in aquaculture practices and how these might affect the welfare of farmed fish. PMID:25000796

  11. Reproductive behavior in the annual fish Austrolebias reicherti Loureiro & García 2004 (Cyprinodontiformes: Rivulidae)

    Daniel García; Marcelo Loureiro; Bettina Tassino

    2008-01-01

    Annual fishes inhabit temporary ponds that dry out seasonally and the adaptations to survive this extreme condition include high metabolic rates and an elaborate courtship behavior which ends in the deposition of drought-resistant eggs, capable of going through diapause stages in the substrate. The pronounced sexual dimorphism that these fishes show suggests that sexual selection could play a key role in the differentiation, speciation and evolution of this diverse group of fishes. However, t...

  12. Sex and sexual ornamentation associated with survival of the cyprinid fish, Rutilus rutilus, under disease stress

    Taskinen, Jouni; Sundberg, Lotta-Riina; KORTET, Raine

    2013-01-01

    By conveying information of disease resistance, sexual signals may be used as cues for adaptive mate choice. Here we report observations on survival of laboratory-maintained, wild-collected, sexually mature, ready-to-spawn cyprinid fish, Rutilus rutilus (roach), under accidental epidemic attributed to Flavobacterium psychrophilum, diagnosed using species-specific PCR. The fish were maintained in a single tank. During the 27 days observation period, both the proportion of fish surviving the in...

  13. The early stress responses in fish larvae.

    Pederzoli, Aurora; Mola, Lucrezia

    2016-05-01

    During the life cycle of fish the larval stages are the most interesting and variable. Teleost larvae undergo a daily increase in adaptability and many organs differentiate and become active. These processes are concerted and require an early neuro-immune-endocrine integration. In larvae communication among the nervous, endocrine and immune systems utilizes several known signal molecule families which could be different from those of the adult fish. The immune-neuroendocrine system was studied in several fish species, among which in particular the sea bass (Dicentrarchus labrax), that is a species of great commercial interest, very important in aquaculture and thus highly studied. Indeed the immune system of this species is the best known among marine teleosts. In this review the data on main signal molecules of stress carried out on larvae of fish are considered and discussed. For sea bass active roles in the early immunological responses of some well-known molecules involved in the stress, such as ACTH, nitric oxide, CRF, HSP-70 and cortisol have been proposed. These molecules and/or their receptors are biologically active mainly in the gut before complete differentiation of gut-associated lymphoid tissue (GALT), probably acting in an autocrine/paracrine way. An intriguing idea emerges from all results of these researches; the molecules involved in stress responses, expressed in the adult cells of the hypothalamic-pituitary axis, during the larval life of fish are present in several other localizations, where they perform probably the same role. It may be hypothesized that the functions performed by hypothalamic-pituitary system are particularly important for the survival of the larva and therefore they comprises several other localizations of body. Indeed the larval stages of fish are very crucial phases that include many physiological changes and several possible stress both internal and environmental. PMID:26968620

  14. Evolution and consequences of endothermy in fishes.

    Dickson, Kathryn A; Graham, Jeffrey B

    2004-01-01

    Regional endothermy, the conservation of metabolic heat by vascular countercurrent heat exchangers to elevate the temperature of the slow-twitch locomotor muscle, eyes and brain, or viscera, has evolved independently among several fish lineages, including lamnid sharks, billfishes, and tunas. All are large, active, pelagic species with high energy demands that undertake long-distance migrations and move vertically within the water column, thereby encountering a range of water temperatures. After summarizing the occurrence of endothermy among fishes, the evidence for two hypothesized advantages of endothermy in fishes, thermal niche expansion and enhancement of aerobic swimming performance, is analyzed using phylogenetic comparisons between endothermic fishes and their ectothermic relatives. Thermal niche expansion is supported by mapping endothermic characters onto phylogenies and by combining information about the thermal niche of extant species, the fossil record, and paleoceanographic conditions during the time that endothermic fishes radiated. However, it is difficult to show that endothermy was required for niche expansion, and adaptations other than endothermy are necessary for repeated diving below the thermocline. Although the convergent evolution of the ability to elevate slow-twitch, oxidative locomotor muscle temperatures suggests a selective advantage for that trait, comparisons of tunas and their ectothermic sister species (mackerels and bonitos) provide no direct support of the hypothesis that endothermy results in increased aerobic swimming speeds, slow-oxidative muscle power, or energetic efficiency. Endothermy is associated with higher standard metabolic rates, which may result from high aerobic capacities required by these high-performance fishes to conduct many aerobic activities simultaneously. A high standard metabolic rate indicates that the benefits of endothermy may be offset by significant energetic costs. PMID:15674772

  15. Adaptation Laboratory

    Huq, Saleemul

    2011-11-15

    Efforts to help the world's poor will face crises in coming decades as climate change radically alters conditions. Action Research for Community Adapation in Bangladesh (ARCAB) is an action-research programme on responding to climate change impacts through community-based adaptation. Set in Bangladesh at 20 sites that are vulnerable to floods, droughts, cyclones and sea level rise, ARCAB will follow impacts and adaptation as they evolve over half a century or more. National and international 'research partners', collaborating with ten NGO 'action partners' with global reach, seek knowledge and solutions applicable worldwide. After a year setting up ARCAB, we share lessons on the programme's design and move into our first research cycle.

  16. Adaptive ethnography

    Berth, Mette

    2005-01-01

    This paper focuses on the use of an adaptive ethnography when studying such phenomena as young people's use of mobile media in a learning perspective. Mobile media such as PDAs and mobile phones have a number of affordances which make them potential tools for learning. However, before we begin to...... design and develop educational materials for mobile media platforms we must first understand everyday use and behaviour with a medium such as a mobile phone. The paper outlines the research design for a PhD project on mobile learning which focuses on mobile phones as a way to bridge the gap between...... formal and informal learning contexts. The paper also proposes several adaptive methodological techniques for studying young people's interaction with mobiles....

  17. Hedonic "adaptation"

    Paul Rozin

    2008-02-01

    Full Text Available People live in a world in which they are surrounded by potential disgust elicitors such as ``used'' chairs, air, silverware, and money as well as excretory activities. People function in this world by ignoring most of these, by active avoidance, reframing, or adaptation. The issue is particularly striking for professions, such as morticians, surgeons, or sanitation workers, in which there is frequent contact with major disgust elicitors. In this study, we study the ``adaptation'' process to dead bodies as disgust elicitors, by measuring specific types of disgust sensitivity in medical students before and after they have spent a few months dissecting a cadaver. Using the Disgust Scale, we find a significant reduction in disgust responses to death and body envelope violation elicitors, but no significant change in any other specific type of disgust. There is a clear reduction in discomfort at touching a cold dead body, but not in touching a human body which is still warm after death.

  18. Adaptable positioner

    This paper describes the circuits and programs in assembly language, developed to control the two DC motors that give mobility to a mechanical arm with two degrees of freedom. As a whole, the system is based in a adaptable regulator designed around a 8 bit microprocessor that, starting from a mode of regulation based in the successive approximation method, evolve to another mode through which, only one approximation is sufficient to get the right position of each motor. (Author) 22 fig. 6 ref

  19. Adaptive positioner

    This paper describes the circuits and programs in assembly language, developed to control the two DC motors that give mobility to a mechanical arm with two degrees of freedom. As a whole, the system is based in a adaptable regulator designed around a 8 bit microprocessor that, starting from a mode of regulation based in the successive approximation method, evolve to another mode through which, only one approximation is sufficient to get the right position of each motor. (Author) 6 refs

  20. Adaptive noise

    Viney, Mark; Reece, Sarah E.

    2013-01-01

    In biology, noise implies error and disorder and is therefore something which organisms may seek to minimize and mitigate against. We argue that such noise can be adaptive. Recent studies have shown that gene expression can be noisy, noise can be genetically controlled, genes and gene networks vary in how noisy they are and noise generates phenotypic differences among genetically identical cells. Such phenotypic differences can have fitness benefits, suggesting that evolution can shape noise ...

  1. Fishing Community Profiles

    National Oceanic and Atmospheric Administration, Department of Commerce — To enable fisheries managers to comply with National Standard 8 (NS8), NMFS social scientists around the nation are preparing fishing community profiles that...

  2. SIS - Fish Assessment

    National Oceanic and Atmospheric Administration, Department of Commerce — The Fish Assessment data set within the Species Information System (SIS) constraints information related to fishery stock assessments, including assessment...

  3. Poisoning - fish and shellfish

    In Ciguatera poisoning, the poisonous ingredient is ciguatoxin. This is a poison made in small amounts by certain algae and algae-like organisms called dinoflagellates. Small fish that eat the algae ...

  4. Fish germ cells

    2010-01-01

    Fish, like many other animals, have two major cell lineages, namely the germline and soma. The germ-soma separation is one of the earliest events of embryonic development. Germ cells can be specifically labeled and isolated for culture and transplan-tation, providing tools for reproduction of endangered species in close relatives, such as surrogate production of trout in salmon. Haploid cell cultures, such as medaka haploid embryonic stem cells have recently been obtained, which are capable of mimicking sperm to produce fertile offspring, upon nuclear being directly transferred into normal eggs. Such fish originated from a mosaic oocyte that had a haploid meiotic nucleus and a transplanted haploid mitotic cell culture nucleus. The first semi-cloned fish is Holly. Here we review the current status and future directions of understanding and manipulating fish germ cells in basic research and reproductive technology.

  5. Logy Bay Fishing Settlement

    S H Parsons and Sons

    2003-01-01

    202 x 151 mm. Showing the small inlet with moored rowing boats and rough wooden shacks built on the cliffside. Lying about seven miles from St. John's, Logy Bay was used as a summertime fishing station.

  6. Where is the rudder of a fish?: the mechanism of swimming and control of self-propelled fish school

    Wu, Chuijie; Wang, Liang

    2010-03-01

    Numerical simulation and control of self-propelled swimming of two- and three-dimensional biomimetic fish school in a viscous flow are investigated. With a parallel computational fluid dynamics package for the two- and three-dimensional moving boundary problem, which combines the adaptive multi-grid finite volume method and the methods of immersed boundary and volume of fluid, it is found that due to the interactions of vortices in the wakes, without proper control, a fish school swim with a given flapping rule can not keep the fixed shape of a queue. In order to understand the secret of fish swimming, a new feedback control strategy of fish motion is proposed for the first time, i.e., the locomotion speed is adjusted by the flapping frequency of the caudal, and the direction of swimming is controlled by the swinging of the head of a fish. Results show that with this feedback control strategy, a fish school can keep the good order of a queue in cruising, turning or swimming around circles. This new control strategy, which separates the speed control and direction control, is important in the construction of biomimetic robot fish, with which it greatly simplifies the control devices of a biomimetic robot fish.

  7. Fish Stem Cell Cultures

    Ni Hong, Zhendong Li, Yunhan Hong

    2011-01-01

    Stem cells have the potential for self-renewal and differentiation. First stem cell cultures were derived 30 years ago from early developing mouse embryos. These are pluripotent embryonic stem (ES) cells. Efforts towards ES cell derivation have been attempted in other mammalian and non-mammalian species. Work with stem cell culture in fish started 20 years ago. Laboratory fish species, in particular zebrafish and medaka, have been the focus of research towards stem cell cultures. Medaka is th...

  8. Welfare in farmed fish

    Damsgård, Børge; Juell, Jon-Erik; Braastad, Bjarne Olai

    2006-01-01

    The interest of fish welfare is increasing, both in Norway and internationally, leading to an increasing need for scientific knowledge about basic and applied questions related to how farmed fish are produced. The strategic institute programme (SIP) ”Welfare in farmed fish” was financed by the Research Council of Norway, for the five years period from 1 January 2001 to 31 December 2005. The core partners in the SIP were the Norwegian Institute of Fisheries and Aquaculture Research (Fiskerifor...

  9. Improved fish smoking: Ghana

    2001-01-01

    Fish is an important source of food and income to many people in the developing world. In Africa, some 5 percent of the population, about 35 million people, depend wholly or partly on the fisheries sector, mostly artisanal fisheries, for their livelihood. Various traditional methods are employed to preserve and process fish for consumption and storage. These include smoking, drying, salting, frying and fermenting and various combinations of these. In Ghana, smoking is the mo...

  10. Local adaptation in brown trout early life-history traits: implications for climate change adaptability

    Jensen, L.F.; Hansen, Michael Møller; Pertoldi, C.;

    2008-01-01

    adapt. Temperature-related adaptability in traits related to phenology and early life history are expected to be particularly important in salmonid fishes. We focused on the latter and investigated whether four populations of brown trout (Salmo trutta) are locally adapted in early life-history traits......) for two traits, indicating local adaptation. A temperature effect was observed for three traits. However, this effect varied among populations due to locally adapted reaction norms, corresponding to the temperature regimes experienced by the populations in their native environments. Additive genetic...... variance and heritable variation in phenotypic plasticity suggest that although increasing temperatures are likely to affect some populations negatively, they may have the potential to adapt to changing temperature regimes.  ...

  11. Heart synchronization for SPIM microscopy of living zebra fish

    Taylor, J. M.; Saunter, C. D.; Chaudhry, B.; Henderson, D. J.; Love, G. D.; Girkin, J. M.

    2011-03-01

    We describe work on producing a selective plane illumination microscope for cardiac imaging in zebra fish embryos. The system has a novel synchronization system for imaging oscillating structures (e.g. the heart) and will have adaptive optics for image optimization.

  12. Early life of inshore fishes in Greenland

    Swalethorp, Rasmus

    reported from numerous fjords in Norway, Canada and Greenland, very little is known about their early life history and the physical-biological mechanisms impacting their survival in such inshore areas. To better understand the processes of importance to the early life success of fish, I carried out a...... from the area was limited. Later, the seasonal breakup of ice in a connecting river resulted in an increased freshwater outflow, then enhancing the dispersal of the older larvae. Throughout the study, marked spatial and temporal differences in the zooplankton community composition were observed. The...... conditions may result in a strong recruitment, which again might be the background of the relatively high cod spawning stock biomass found in Kapisigdlit. Since different species of fish may vary in their spawning strategies and adaptations to physical and biological conditions, the larval assemblages in...

  13. Sanitation, fish handling and artisanal fish processing within fishing communities: socio-cultural influences

    Odongkara, K.O.; Kyangwa, I.

    2005-01-01

    postive transformation of the fisheries sector in Uganda has of recent been scatted by failure to mountain fish quality and safety,akey prerequiste for retaining and gaining fish markets. The social cultural study established the extent to which social cutural practices had affected the levels and the use of sanitation facilities,fish handling facilities and artisanal fish processing techniques and the factors that influenced these practices in the fishing communities of lake victoria. ...

  14. When a Fish is a Fish: The Economic Impacts of Escaped Farmed Fish

    Yajie Liu; Jon Olaf Olaussen; Anders Skonhoft

    2011-01-01

    The escape of cultured fish from a marine aquaculture facility is a type of biological invasion that may lead to a variety of potential ecological and economic effects on native fish. This paper develops a general invasive species impact model to capture explicitly both the ecological and economic effects of invasive species, especially escaped farmed fish, on native stocks and harvests. First, the possible effects of escaped farmed fish on the growth and stock size of a native fish are exami...

  15. Cowlitz Falls fish passage

    The upper Cowlitz was once home to native salmon and steelhead. But the combined impacts of overharvest, farming, logging and road building hammered fish runs. And in the 1960s, a pair of hydroelectric dams blocked the migration path of ocean-returning and ocean-going fish. The lower Cowlitz still supports hatchery runs of chinook, coho and steelhead. But some 200 river miles in the upper river basin--much of it prime spawning and rearing habitat--have been virtually cut off from the ocean for over 26 years. Now the idea is to trap-and-haul salmon and steelhead both ways and bypass previously impassable obstacles in the path of anadromous fish. The plan can be summarized, for the sake of explanation, in three steps: (1) trap and haul adult fish--collect ocean-returning adult fish at the lowermost Cowlitz dam, and truck them upstream; (2) reseed--release the ripe adults above the uppermost dam, and let them spawn naturally, at the same time, supplement these runs with hatchery born fry that are reared and imprinted in ponds and net pens in the watershed; (3) trap and haul smolts--collection the new generation of young fish as they arrive at the uppermost Cowlitz dam, truck them past the three dams, and release them to continue their downstream migration to the sea. The critical part of any fish-collection system is the method of fish attraction. Scientists have to find the best combination of attraction system and screens that will guide young fish to the right spot, away from the turbine intakes. In the spring of 1994 a test was made of a prototype system of baffles and slots on the upriver face of the Cowlitz Falls Dam. The prototype worked at 90% efficiency in early tests, and it worked without the kind of expensive screening devices that have been installed on other dams. Now that the success of the attraction system has been verified, Harza engineers and consultants will design and build the appropriate collection part of the system

  16. Freshwater and fish

    Severe radioactive contamination of the freshwater environment could have serious consequences for both drinking water and fish. Most of the Nordic countries have an abundance of freshwater lakes and rivers. Finland alone has about 56,000 lakes, each with a surface area of 1 hectare or more. Nearly 10% of Finland's surface is covered with lakes and rivers. In Sweden, about 9% of the surface area is freshwater, in Norway about 5%, and in Denmark only about 2%. Freshwater plays a minor role in Iceland, but even there numerous rivers discharge from the volcanic soils to the Ocean. Cs-137 and 90Sr are likely to be the most important radionuclides with respect to long term radioactive contamination of freshwater. If radioactive deposition occurs in the absence of snow and ice radionuclides will contaminate the surface water directly and may rapidly enter the aquatic food chain. Fish which eat contaminated plankton become contaminated almost immediately. Deposition during summer increases the transfer for radionuclides to fish since fish metabolism is faster during the warm season. During the cold period, fish metabolism is slow and thus uptake and excretion of radiocaesium are also slow. (EG)

  17. Fish robotics and hydrodynamics

    Lauder, George

    2010-11-01

    Studying the fluid dynamics of locomotion in freely-swimming fishes is challenging due to difficulties in controlling fish behavior. To provide better control over fish-like propulsive systems we have constructed a variety of fish-like robotic test platforms that range from highly biomimetic models of fins, to simple physical models of body movements during aquatic locomotion. First, we have constructed a series of biorobotic models of fish pectoral fins with 5 fin rays that allow detailed study of fin motion, forces, and fluid dynamics associated with fin-based locomotion. We find that by tuning fin ray stiffness and the imposed motion program we can produce thrust both on the fin outstroke and instroke. Second, we are using a robotic flapping foil system to study the self-propulsion of flexible plastic foils of varying stiffness, length, and trailing edge shape as a means of investigating the fluid dynamic effect of simple changes in the properties of undulating bodies moving through water. We find unexpected non-linear stiffness-dependent effects of changing foil length on self-propelled speed, and as well as significant effects of trailing edge shape on foil swimming speed.

  18. Fish mucous cocoons: the 'mosquito nets' of the sea.

    Grutter, Alexandra S; Rumney, Jennifer G; Sinclair-Taylor, Tane; Waldie, Peter; Franklin, Craig E

    2011-04-23

    Mucus performs numerous protective functions in vertebrates, and in fishes may defend them against harmful organisms, although often the evidence is contradictory. The function of the mucous cocoons that many parrotfishes and wrasses sleep in, while long used as a classical example of antipredator behaviour, remains unresolved. Ectoparasitic gnathiid isopods (Gnathiidae), which feed on the blood of fish, are removed by cleaner fish during the day; however, it is unclear how parrotfish and wrasse avoid gnathiid attacks at night. To test the novel hypothesis that mucous cocoons protect against gnathiids, we exposed the coral reef parrotfish Chlorurus sordidus (Scaridae) with and without cocoons to gnathiids overnight and measured the energetic content of cocoons. Fish without mucous cocoons were attacked more by gnathiids than fish with cocoons. The energetic content of mucous cocoons was estimated as 2.5 per cent of the fish's daily energy budget fish. Therefore, mucous cocoons protected against attacks by gnathiids, acting like mosquito nets in humans, a function of cocoons and an efficient physiological adaptation for preventing parasite infestation that is not used by any other animal. PMID:21084337

  19. Does functional redundancy stabilize fish communities?

    Rice, Jake; Daan, Niels; Gislason, Henrik;

    2013-01-01

    in abundance or biomass could be accounted for by the Law of Large Numbers, providing no evidence that specific ecological processes or co-adaptations are necessary to produce this effect. This implies that successful conservation policies to maintain the resilience of a marine fish community could be based...... groups or maximum length of species (Lmax) groups with larger numbers of species had lower coefficients of variation in abundance and biomass over time than did groupings with fewer species. Results supported this hypothesis. However, the stabilizing effect of numbers of species in a group on variation...

  20. The welfare of fish.

    Iwama, George K

    2007-05-01

    Our interactions with fish cover a wide range of activities including enjoying them as pets to consuming them as food. I propose that we confine the consideration of the welfare of fish to their physiology, and not join the discussion on whether fish can feel pain and suffering, as humans. A significant proportion of the papers on animal welfare center on whether non-human animals can feel pain, and suffer as humans. This is a question that never can be answered unequivocally. The premise of the present paper is that we have an ethical responsibility to respect the life and wellbeing of all organisms. Thus, we should concentrate on the behavioural, physiological, and cellular indicators of their well-being and attempt to minimize a state of stress in the animals that we have in our care or influence. PMID:17578254

  1. Fish Hematology and Associated Disorders.

    Grant, Krystan R

    2015-09-01

    Fish health is a growing concern as pets, education, and aquaculture evolves. For the veterinary staff, fish handling, diagnostics, medicine, and surgery may require specialized training and equipment in comparison with terrestrial and arboreal animals, simply because of their aquatic nature and diversity. Fish hematology is one diagnostic tool that may not require additional equipment, may be inexpensive, and provide useful information in guiding treatment options. Challenges involving hematology may include handling and restraint, venipuncture, evaluation, and interpretation. In this article, strategies for these challenges are discussed for teleost (bony fish) and elasmobranch (cartilaginous fish) fish types. PMID:26297413

  2. Fish Hatchery Management in Nigeria

    J.A. Akankali

    2011-04-01

    Full Text Available Fish hatchery management is efficient tool in intensive fish culture. The vital requirements of fish hatchery, hatchery construction, concrete tank construction, nursery, rearing and production ponds, fish seed hatchery, hormone in fish spawning, hypophysation, compounds used for induced breeding, hormone administration, spawning and rearing, steps in artificial propagation, hatchery management, nursery management are basic elements in effective hatchery management. The article reviews these vital elements to re-awaken fish farmers, Fisheries students private and public sectors in the formulation of fisheries policies.

  3. Fish Stem Cell Cultures

    Ni Hong, Zhendong Li, Yunhan Hong

    2011-01-01

    Full Text Available Stem cells have the potential for self-renewal and differentiation. First stem cell cultures were derived 30 years ago from early developing mouse embryos. These are pluripotent embryonic stem (ES cells. Efforts towards ES cell derivation have been attempted in other mammalian and non-mammalian species. Work with stem cell culture in fish started 20 years ago. Laboratory fish species, in particular zebrafish and medaka, have been the focus of research towards stem cell cultures. Medaka is the second organism that generated ES cells and the first that gave rise to a spermatogonial stem cell line capable of test-tube sperm production. Most recently, the first haploid stem cells capable of producing whole animals have also been generated from medaka. ES-like cells have been reported also in zebrafish and several marine species. Attempts for germline transmission of ES cell cultures and gene targeting have been reported in zebrafish. Recent years have witnessed the progress in markers and procedures for ES cell characterization. These include the identification of fish homologs/paralogs of mammalian pluripotency genes and parameters for optimal chimera formation. In addition, fish germ cell cultures and transplantation have attracted considerable interest for germline transmission and surrogate production. Haploid ES cell nuclear transfer has proven in medaka the feasibility of semi-cloning as a novel assisted reproductive technology. In this special issue on “Fish Stem Cells and Nuclear Transfer”, we will focus our review on medaka to illustrate the current status and perspective of fish stem cells in research and application. We will also mention semi-cloning as a new development to conventional nuclear transfer.

  4. Jurassic fishes of Gondwana

    Adriana López-Arbarello

    2008-12-01

    Full Text Available The Jurassic is an important period for understanding the origin of modern fish faunas, since it saw the first radiation - and in some cases the origin - of most modern groups. In chondrichthyans, neoselachian sharks and rays diversified during this time. In actinopterygians, the neopterygians, and among them the teleosts, experienced an important radiation, which led to the appearance of several of the modern teleosts groups. In the sarcopterygians, dipnoans and actinistians approached their current forms. However, the Jurassic fossil record of fishes is strongly biased towards the Northern Hemisphere. The only notable Early Jurassic fish fauna from Gondwana is that of the Kota Formation of India. For the Middle Jurassic, the most important Gondwanan fish faunas are those of the Aalenian-Bathonian Stanleyville Beds of the Democratic Republic of Congo, in which a distinct freshwater and a marine fauna are found. In the Late Jurassic, the Gondwanan record is slightly better, with important marine faunas being known from the Oxfordian Quebrada del Profeta in Chile and the Tithonian Vaca Muerta Formation of Argentina. Freshwater faunas have been described from the Tithonian Talbragar Beds of eastern Australia and the Tithonian Cañadón Calcáreo Formation of Argentina. The taxonomic composition of the known marine actinopterygian faunas of Gondwana is in general agreement with faunas of the Northern Hemisphere. However, the Jurassic fish record from Gondwana is highly incomplete both stratigraphically and geographically, and most faunas are in need of revision, further hampering an interpretation of Jurassic fish evolution in the Southern Hemisphere.

  5. Fish remains and humankind

    Andrew K G Jones

    1997-08-01

    Full Text Available The four papers in this issue represent a trawl of the reports presented to the Fourth meeting of the International Council for Archaeozoology (ICAZ Fish Remains Working Group, which met at the University of York in 1987. The conference discussed material from many parts of the world - from Australasia to the north-west coast of America - and many eras, ranging in date from the early Pleistocene to the 1980s. It demonstrated both the variety of work being carried out and the growing interest in ancient fish remains. Internet Archaeology plans to publish other batches of papers from this conference. These reports will demonstrate the effort being made to distinguish between assemblages of fish remains which have been deposited by people and those which occur in ancient deposits as a result of the action of other agents. To investigate this area, experiments with modern material and observations of naturally occurring fish bone assemblages are supplemented with detailed analysis of ancient and modern fish remains. The papers published here illustrate the breadth of research into osteology, biogeography, documentary research, and the practicalities of recovering fish remains. Read, digest and enjoy them! Using the Internet for publishing research papers is not only ecologically sound (saving paper, etc. it disseminates scholarship to anyone anywhere on the planet with access to what is gradually becoming necessary technology in the late 20th century. Hopefully, future groups of papers will include video and audio material recorded at the conference, and so enable those who could not attend to gain further insights into the meeting and the scholarship underpinning this area of research.

  6. Adaptive management

    Rist, Lucy; Campbell, Bruce Morgan; Frost, Peter

    2013-01-01

    in scientific articles, policy documents and management plans, but both understanding and application of the concept is mixed. This paper reviews recent literature from conservation and natural resource management journals to assess diversity in how the term is used, highlight ambiguities and consider how......Adaptive management (AM) emerged in the literature in the mid-1970s in response both to a realization of the extent of uncertainty involved in management, and a frustration with attempts to use modelling to integrate knowledge and make predictions. The term has since become increasingly widely used...... the concept might be further assessed. AM is currently being used to describe many different management contexts, scales and locations. Few authors define the term explicitly or describe how it offers a means to improve management outcomes in their specific management context. Many do not adhere to the idea...

  7. In Place of Fishing

    Ounanian, Kristen

    2016-01-01

    the imposition of transferable catch shares, this research takes a holistic approach to studying coastal communities. This study focuses on instances of transition from a greater presence of the fishing industry to new configurations of fisheries, maritime sectors, and tourism. Situated in places in......, affecting certain segments of the community more severely than others. In addition, the transition to tourism dependence holds a somewhat precarious future for coastal communities in temperate areas. In some cases, heritage and community identity remain strongly connected to the surviving fishing industry...

  8. Fish in Ecotoxicological Studies

    Vesela Yancheva

    2015-06-01

    Full Text Available Water contamination (heavy metals, pesticides, POPs, etc. is a serious environmental issue which has been raising lots of attention in the last decades because it can destroy aquatic ecosystems and hence, reduce biodiversity. In the field of ecotoxicology it is of main interest to investigate what the effects of organic and inorganic toxicants on different biological organization (cell, tissue, organism, population are. Thus, many authors use different test organisms and particularly, fish. In the current study we aimed to present collected data from the last years which describe why fish is an appropriate species in terms of ecotoxicological research.

  9. Fish and Bird

    毛秀波

    2010-01-01

    人物:B——Bird L——Little Fish M——Mother Fish N——Narracor(旁白)道具:角色头饰 N:一条生活在河里的Little Fish对天空充满了好奇,一心想飞到天空去看看。此时,Little Fish正依偎在Mother Fish身边,好奇地望着天空。

  10. Fish consumption and track to a fish feed formulation

    Cai-Juan, Soong; Ramli, Razamin; Rahman, Rosshairy Abdul

    2015-12-01

    Strategically located in the equator, Malaysia is blessed with plenty of fish supply. The high demand in fish consumption has helped the development in the fishery industry and provided numerous jobs in the secondary sector, contributing significantly to the nation's income. A survey was conducted to understand the trend of current demands for fish for the purpose of designing a feed formulation, which is still limited in this area of study. Results showed that grouper fish in restaurants commanded a very high price compared to other species of fish. Tiger grouper gained the highest demand in most restaurants, while giant grouper had the highest price in restaurants. Due to the demand and challenges to culture this type of fish, a framework for fish feed formulation is proposed. The formulation framework when materialized could be an alternative to the use of trash fish as the feed for grouper.

  11. Fish Commoditization: Sustainability Strategies to Protect Living Fish

    Lam, Mimi E.; Pitcher, Tony J.

    2012-01-01

    The impacts of early fishing on aquatic ecosystems were minimal, as primitive technologies were used to harvest fish primarily for food. As fishing technology grew more sophisticated and human populations dispersed and expanded, local economies transitioned from subsistence to barter and trade. Expanded trade networks and mercantilization led to…

  12. Fish and fish oil in health promotion and disease prevention

    Fish is an important dietary component due to its contribution of valuable nutrients. In addition to the high quality protein and micronutrients provided, fish is the primary source of long-chain omega-3 fatty acids which are found in oils of ‘fatty’ cold water fish. Biomedical evidence supports th...

  13. Anadromous fish inventory: Summary volume

    US Fish and Wildlife Service, Department of the Interior — Summary volume, with discussion, on anadromous fish inventories, species lists, histories of fisheries, habitat, key spawning and rearing areas, runsescapements,...

  14. Temperature - Live Hauling of Fish

    National Oceanic and Atmospheric Administration, Department of Commerce — In certain markets, live fish can be sold for substantially higher prices than fresh dressed fish. A significant live-haul industry has developed in the U.S. and...

  15. KLA - Live Hauling of Fish

    National Oceanic and Atmospheric Administration, Department of Commerce — In certain markets, live fish can be sold for substantially higher prices than fresh dressed fish. A significant live-haul industry has developed in the U.S. and...

  16. Lemongrass-Fried Fish

    1998-01-01

    Ingredients: 500 grams grass carp, several stalks of lemongrass, 5 leaves of lettuce. Condiments: 10 grams sweet sauce (made from fermented flour, scallion powder and ginger root powder); yolk of one egg, cooking wine, salt, pepper and MSG (optional). Method: 1. Cut the fish into pieces. Mash

  17. Yet Another Fish Tale?

    Lalasz, Robert

    2008-01-01

    Last month the "Rocky Mountain News" reported that a survey by an emeritus professor at University of Colorado Boulder found that only 23 of 825 faculty members on the campus were registered Republicans. But on his "New York Times" blog, Stanley Fish brushed off the survey's significance from a familiarly Fishian stance. A faculty's political…

  18. Access and Fishing Activities

    Høst, Jeppe Engset

    In this chapter, I look at the implications of transferable quotas on the organization of production; that is, how fishing activities are structured around access to the individual and transferable quotas and how, in turn, the quotas structure the production. Therefore, this chapter will give a d...

  19. Fish-induced keriorrhea.

    Ling, Ka Ho; Nichols, Peter D; But, Paul Pui-Hay

    2009-01-01

    Many deep-sea fishes store large amounts of wax esters in their body for buoyancy control. Some of them are frequently caught as by-catch of tuna and other fishes. The most noteworthy ones include escolar and oilfish. The accumulation of the indigestible wax esters in the rectum through consumption of these fish engenders discharges or leakage per rectum as orange or brownish green oil, but without noticeable loss of water. This physiological response is called keriorrhea, which is variously described as "oily diarrhea," "oily orange diarrhea," or "orange oily leakage" by the mass media and bloggers on the internet. Outbreaks of keriorrhea have been repeatedly reported across continents. Additional symptoms including nausea, vomiting, abdominal cramps, and diarrhea were complained by the victims. They are probably due to anxiety or panic when suffering from keriorrhea. Escolar and oilfish are banned from import and sale in Italy, Japan, and South Korea. Rapid detection of the two fishes is imperative to ensure proper labeling and safeguarding of the public before and after any keriorrhea outbreak. PMID:19595384

  20. Fish and chips

    Delvenne, Philippe; Deprez, Manuel; Bisig, Bettina; JAMAR, Mauricette; Boniver, Jacques; Bours, Vincent; Herens, Christian

    2010-01-01

    Academic hospital laboratories should offer patients the possibility to have the most accurate diagnosis by the development of new analyses, such as molecular biology tests including FISH (Fluorescent In Situ Hybridization) and chips (microarrays,...). The purpose of this article is to describe the principles and the potential applications of these techniques.

  1. Fish 'n' TRIMs

    Du Pasquier, Louis

    2009-01-01

    A novel diversified multigene family of tripartite-motif (TRIM) intracellular receptors with putative antiviral activity has been identified in teleost fish and published in BMC Biology. The history of these receptors involves ancient linkage to paralogs of the major histocompatibility complex, and the family has invertebrate precursors.

  2. Fishing effort and the impact of fishing gears and fishing methods on fishes and fisheries of Kyoga basin lakes

    Kamanyi, J.R.

    2001-01-01

    Lake Kyoga at the time of Worthington Survey (Worthington, 1929) was fished by only natives around it. The fishing gears consisted of locally made basket traps, hooks and seine nets made out of papyrus. Fishing was mainly during the dry season as in wet season, the fishers would revert to crop growing. During 1937 to 1950s Oreochromis variabilis, oreochromis esculentus (Ngege) and Protopterus aethiopicus (Mamba) were the most important commercial fish species and contributed over 95% to the t...

  3. FEED FORMULATION AND FEEDING TECHNOLOGY FOR FISHES

    Govind Pandey

    2013-01-01

    Most fish farmers and ornamental fish hobbyists buy the bulk of their feed from commercial manufacturers. However, small quantities of specialized feeds are often needed for experimental purposes, feeding difficult-to maintain aquarium fishes, larval or small juvenile fishes, brood fish conditioning, or administering medication to sick fish. Small ornamental fish farms with an assortment of fish require small amounts of various diets with particular ingredients. It is not cost effective for c...

  4. [FY 2014 progress report]: Native Prairie Adaptive Management Database Archive and Competing Model Linkage

    US Fish and Wildlife Service, Department of the Interior — This progress report for the Native Prairie Adaptive Management Database Archive and Competing Model Linkage project covers activities during FY2014. The overall...

  5. Fishing Farmers or Farming Fishers? Fishing Typology of Inland Small-Scale Fishing Households and Fisheries Management in Singkarak Lake, West Sumatra, Indonesia

    Yuerlita; Perret, Sylvain Roger; Shivakoti, Ganesh P.

    2013-07-01

    Technical and socio-economic characteristics are known to determine different types of fishers and their livelihood strategies. Faced with declining fish and water resources, small-scale fisheries engage into transformations in livelihood and fishing practices. The paper is an attempt to understand these changes and their socio-economic patterns, in the case of Singkarak Lake in West Sumatra, Indonesia. Based upon the hypothesis that riparian communities have diverse, complex yet structured and dynamic livelihood systems, the paper's main objective is to study, document and model the actual diversity in livelihood, practices and performance of inland small-scale fisheries along the Singkarak Lake, to picture how households are adapted to the situation, and propose an updated, workable model (typology) of those for policy. Principal component analysis and cluster analysis were used to develop a typology of fishing households. The results show that small-scale fishers can be classified into different types characterized by distinct livelihood strategies. Three household types are identified, namely "farming fishers" households (type I, 30 %), "fishing farmers" households (type II, 30 %), and "mainly fishers" households (type III, 40 %). There are significant differences among these groups in the number of boats owned, annual fishing income, agriculture income and farming experience. Type I consists of farming fishers, well equipped, with high fishing costs and income, yet with the lowest return on fishing assets. They are also landowners with farming income, showing the lowest return on land capital. Type II includes poor fishing farmers, landowners with higher farming income; they show the highest return on land asset. They have less fishing equipment, costs and income. Type III (mainly fishers) consists of poorer, younger fishers, with highest return on fishing assets and on fishing costs. They have little land, low farming income, and diversified livelihood

  6. Fishing farmers or farming fishers? Fishing typology of inland small-scale fishing households and fisheries management in singkarak lake, west sumatra, indonesia.

    Yuerlita; Perret, Sylvain Roger; Shivakoti, Ganesh P

    2013-07-01

    Technical and socio-economic characteristics are known to determine different types of fishers and their livelihood strategies. Faced with declining fish and water resources, small-scale fisheries engage into transformations in livelihood and fishing practices. The paper is an attempt to understand these changes and their socio-economic patterns, in the case of Singkarak Lake in West Sumatra, Indonesia. Based upon the hypothesis that riparian communities have diverse, complex yet structured and dynamic livelihood systems, the paper's main objective is to study, document and model the actual diversity in livelihood, practices and performance of inland small-scale fisheries along the Singkarak Lake, to picture how households are adapted to the situation, and propose an updated, workable model (typology) of those for policy. Principal component analysis and cluster analysis were used to develop a typology of fishing households. The results show that small-scale fishers can be classified into different types characterized by distinct livelihood strategies. Three household types are identified, namely "farming fishers" households (type I, 30 %), "fishing farmers" households (type II, 30 %), and "mainly fishers" households (type III, 40 %). There are significant differences among these groups in the number of boats owned, annual fishing income, agriculture income and farming experience. Type I consists of farming fishers, well equipped, with high fishing costs and income, yet with the lowest return on fishing assets. They are also landowners with farming income, showing the lowest return on land capital. Type II includes poor fishing farmers, landowners with higher farming income; they show the highest return on land asset. They have less fishing equipment, costs and income. Type III (mainly fishers) consists of poorer, younger fishers, with highest return on fishing assets and on fishing costs. They have little land, low farming income, and diversified livelihood

  7. Spawning ascent durations of pelagic spawning reef fishes

    Caroline A. HABRUN; Gorka SANCHO

    2012-01-01

    Predation risks have been hypothesized to influence spawning behaviors of coral reef fishes that broadcast gametes pelagically.The duration of spawning ascents of 13 species were measured from video footage at a single spawning site for multiple coral reef fishes to investigate if this behavior was influenced by varying risks of predation.Fishes that spawned in pairs had ascents of longer duration than group-spawning species.Duration of spawning ascents did not vary between fishes spawning at daytime and dusk,nor between group-spawning species with specific anti-predatory morphological adaptations.These results indicate that risk of predation may not significantly influence the duration of spawning ascents of pair spawning reef fishes at our study site,while group-spawning behaviors are influenced by predation.Avoidance of egg predation by benthic organisms and female mate choice are more likely to influence the pelagic spawning behaviors of all fishes observed [Current Zoology 58 ( 1 ):95-102,2012].

  8. A marsupial robotic fish team: Design, motion and cooperation

    2010-01-01

    A bio-inspired marsupial robotic fish system composed of heterogeneous robotic fish is proposed in this paper. A miniature robotic fish, as the daughter robotic fish, can adapt to some narrow space, while the mother robotic fish, with a cabin to transport the daughter, possesses a powerful movement ability to improve the mobility and endurance of the team. The structures for mimicking bio-motion and the method for fishlike-motion are presented. A typical task of daughter-mother following is given to show the cooperation of the team. A motion model of free swimming is built based on the Lagrangian function, and the coupled dynamic and kinematic functions are calculated based on the relation between the generalized force and fluid force. Then, a neural network is trained through the data generated from this model to get a predictive yaw controller, which can control the orientation by a different offset of each link. The daughter robotic fish adopts a dynamic light source tracking approach to follow the mother, and a heterogeneous communication-based finite state machine is presented for task modeling. Experiments are carried out to verify the system.

  9. Some experiments on commercial pond fish culture in the tidal mangrove area of Niger delta of Nigeria

    Uyeh, W.W.

    1987-01-01

    A pilot fish culture project was initiated by Shell Petroleum Development Company of Nigeria Limited in 1981 with specific aims and objectives. Site selection, survey, pond construction method and fish production with regards to experiences gathered and gained, problems and solutions so far obtained are discussed. Trials of freshwater fish species to check their adaptability to brackishwater ponds were carried out and the promising results of the growth rate of these species when compared wit...

  10. Selective breeding to improve welfare in farmed fish: Modification of the stress response in rainbow trout (Oncorhynchus mykiss)

    Pottinger, Tom G.

    2009-01-01

    Intensive rearing of fish presents the challenge of minimising production cost without compromising the health and well-being of the stock. Most farmed fish species, (with the exception of carp) are just a few generations removed from the wild-type and consequently many relatively benign aspects of the aquaculture environment are perceived as stressors by fish. Although the neuroendocrine stress response is a key element of an animals adaptive repertoire, inappropriate activation of the respo...

  11. Consumers’ attitude towards fish meat

    Francesca Conte

    2014-09-01

    Full Text Available The overall aim of this paper is to show the factors that may affect consumers’ attitude towards farmed fish products. Consumers ask new products on the basis of different quality attributes: stability, safety, composition, better health effects, environment protection, etc. Different and controversial opinions on farmed and wild fish are also explored by literature review. The authors pay attention also to fish welfare as an emerging issue and effective information about fish products as a factor exerting a positive influence on consumers’ decision of purchase. Some relevant legislative notes on the paper’s topics are also cited. The qualitative aspects of aquaculture fish and the consumers’ demand and choice need further studies, according to some factors, such as the changing consumers’ attitudes towards fish products, the different fish quality perception and the development in the aquaculture systems.

  12. Who cares about fish welfare?

    Ellingsen, Kristian; Grimsrud, Kristine; Nielsen, Hanne Marie;

    2015-01-01

    Purpose – The purpose of this paper is threefold: first, to assess how concerned Norwegians are about fish welfare; second, to investigate Norwegians’ willingness to pay for salmon filet made from welfare-assured farmed fish with high levels of welfare; and third, to examine Norwegian opinions...... about the appropriate way to pay for better welfare standards in fish production. Design/methodology/approach – On the basis of two focus group sessions, a survey questionnaire was developed and distributed to a representative sample of 2,147 Norwegian households via e-mail. Findings – Results showed...... that the Norwegian public is concerned about fish welfare and is willing to pay a price premium for products made from welfare-assured fish. Norwegian consumers do not, however, want to be the only ones paying for fish welfare, as the main responsibility for fish welfare lies with producers and the Government...

  13. Use Case Design for AdaptIVe

    Wolter, Stefan; Kelsch, Johann

    2014-01-01

    AdaptIVe is a large scale European project on vehicle automation and the pertaining human-machine interaction. The use case design process is a crucial part of the system design process and a part of the human-vehicle integration subproject. This paper explains the methodology for describing use cases in AdaptIVe. They are primarily based on sequence diagrams with main and alternative flows.

  14. Efficiency of Fish Propulsion

    Maertens, A P; Yue, D K P

    2014-01-01

    It is shown that the system efficiency of a self-propelled flexible body is ill-defined unless one considers the concept of quasi-propulsive efficiency, defined as the ratio of the power needed to tow a body in rigid-straight condition over the power it needs for self-propulsion, both measured for the same speed. Through examples we show that the quasi-propulsive efficiency is the only rational non-dimensional metric of the propulsive fitness of fish and fish-like mechanisms. Using two-dimensional viscous simulations and the concept of quasi-propulsive efficiency, we discuss the efficiency two-dimensional undulating foils. We show that low efficiencies, due to adverse body-propulsor hydrodynamic interactions, cannot be accounted for by the increase in friction drag.

  15. Herpesviruses that Infect Fish

    Moshe Kotler

    2011-11-01

    Full Text Available Herpesviruses are host specific pathogens that are widespread among vertebrates. Genome sequence data demonstrate that most herpesviruses of fish and amphibians are grouped together (family Alloherpesviridae and are distantly related to herpesviruses of reptiles, birds and mammals (family Herpesviridae. Yet, many of the biological processes of members of the order Herpesvirales are similar. Among the conserved characteristics are the virion structure, replication process, the ability to establish long term latency and the manipulation of the host immune response. Many of the similar processes may be due to convergent evolution. This overview of identified herpesviruses of fish discusses the diseases that alloherpesviruses cause, the biology of these viruses and the host-pathogen interactions. Much of our knowledge on the biology of Alloherpesvirdae is derived from research with two species: Ictalurid herpesvirus 1 (channel catfish virus and Cyprinid herpesvirus 3 (koi herpesvirus.

  16. Analysis of the erythropoietin of a Tibetan Plateau schizothoracine fish (Gymnocypris dobula) reveals enhanced cytoprotection function in hypoxic environments

    Xu, Qianghua; Zhang, Chi; Zhang, Dongsheng; Jiang, Huapeng; Peng, Sihua; Yang LIU; Zhao, Kai; Wang, Congcong; Chen, Liangbiao

    2016-01-01

    Background Erythropoietin (EPO) is a glycoprotein hormone that plays a principal regulatory role in erythropoiesis and initiates cell homeostatic responses to environmental challenges. The Qinghai-Tibet Plateau is a natural laboratory for hypoxia adaptation. Gymnocypris dobula is a highly specialized plateau schizothoracine fish that is restricted to > 4500 m high-altitude freshwater rivers and ponds in the Qinghai-Tibet Plateau. The role of EPO in the adaptation of schizothoracine fish to hy...

  17. The fish egg microbiome

    Liu, Y

    2016-01-01

    Y. Liu Prof. dr. F. Govers (promotor); Prof. dr. J.M. Raaijmakers (promotor); Dr. I. de Bruijn (co-promotor); Wageningen University, 13 June 2016, 170 pp. The fish egg microbiome: diversity and activity against the oomycete pathogen Saprolegnia Emerging oomycete pathogens increasingly threaten biodiversity and food security. This thesis describes the study of the microbiome of Atlantic salmon (Salmo salar L.) eggs and analyses of the effects of infections by the oomycete pathogen Saprolegnia ...

  18. Fish in Ecotoxicological Studies

    Vesela Yancheva; Iliana Velcheva; Stela Stoyanova; Elenka Georgieva

    2015-01-01

    Water contamination (heavy metals, pesticides, POPs, etc.) is a serious environmental issue which has been raising lots of attention in the last decades because it can destroy aquatic ecosystems and hence, reduce biodiversity. In the field of ecotoxicology it is of main interest to investigate what the effects of organic and inorganic toxicants on different biological organization (cell, tissue, organism, population) are. Thus, many authors use different test organisms and particularly, fish....

  19. Beyond biodiversity: fish metagenomes.

    Alba Ardura

    Full Text Available Biodiversity and intra-specific genetic diversity are interrelated and determine the potential of a community to survive and evolve. Both are considered together in Prokaryote communities treated as metagenomes or ensembles of functional variants beyond species limits.Many factors alter biodiversity in higher Eukaryote communities, and human exploitation can be one of the most important for some groups of plants and animals. For example, fisheries can modify both biodiversity and genetic diversity (intra specific. Intra-specific diversity can be drastically altered by overfishing. Intense fishing pressure on one stock may imply extinction of some genetic variants and subsequent loss of intra-specific diversity. The objective of this study was to apply a metagenome approach to fish communities and explore its value for rapid evaluation of biodiversity and genetic diversity at community level. Here we have applied the metagenome approach employing the barcoding target gene coi as a model sequence in catch from four very different fish assemblages exploited by fisheries: freshwater communities from the Amazon River and northern Spanish rivers, and marine communities from the Cantabric and Mediterranean seas.Treating all sequences obtained from each regional catch as a biological unit (exploited community we found that metagenomic diversity indices of the Amazonian catch sample here examined were lower than expected. Reduced diversity could be explained, at least partially, by overexploitation of the fish community that had been independently estimated by other methods.We propose using a metagenome approach for estimating diversity in Eukaryote communities and early evaluating genetic variation losses at multi-species level.

  20. Oral vaccination of fish

    Embregts, Carmen W.E.; Forlenza, Maria

    2016-01-01

    The limited number of oral vaccines currently approved for use in humans and veterinary species clearly illustrates that development of efficacious and safe oral vaccines has been a challenge not only for fish immunologists. The insufficient efficacy of oral vaccines is partly due to antigen breakdown in the harsh gastric environment, but also to the high tolerogenic gut environment and to inadequate vaccine design. In this review we discuss current approaches used to develop oral vaccines fo...

  1. Herpesviruses that Infect Fish

    Moshe Kotler; Larry Hanson; Arnon Dishon

    2011-01-01

    Herpesviruses are host specific pathogens that are widespread among vertebrates. Genome sequence data demonstrate that most herpesviruses of fish and amphibians are grouped together (family Alloherpesviridae) and are distantly related to herpesviruses of reptiles, birds and mammals (family Herpesviridae). Yet, many of the biological processes of members of the order Herpesvirales are similar. Among the conserved characteristics are the virion structure, replication process, the ability to est...

  2. Adaptively robust filtering with classified adaptive factors

    CUI Xianqiang; YANG Yuanxi

    2006-01-01

    The key problems in applying the adaptively robust filtering to navigation are to establish an equivalent weight matrix for the measurements and a suitable adaptive factor for balancing the contributions of the measurements and the predicted state information to the state parameter estimates. In this paper, an adaptively robust filtering with classified adaptive factors was proposed, based on the principles of the adaptively robust filtering and bi-factor robust estimation for correlated observations. According to the constant velocity model of Kalman filtering, the state parameter vector was divided into two groups, namely position and velocity. The estimator of the adaptively robust filtering with classified adaptive factors was derived, and the calculation expressions of the classified adaptive factors were presented. Test results show that the adaptively robust filtering with classified adaptive factors is not only robust in controlling the measurement outliers and the kinematic state disturbing but also reasonable in balancing the contributions of the predicted position and velocity, respectively, and its filtering accuracy is superior to the adaptively robust filter with single adaptive factor based on the discrepancy of the predicted position or the predicted velocity.

  3. Investigating global change and fish biology with fish otolith radiocarbon

    Kalish, John M.

    1994-06-01

    Fish otoliths, calcium carbonate gravity and auditory receptors in the membranous labyrinths of teleost fish, can provide radiocarbon data that are valuable to a wide range of disciplines. For example, the first pre- and post-bomb time series of radiocarbon levels from northern or southern hemisphere temperate oceans was obtained by carrying out accelerator mass spectrometry analyses on selected regions of fish otoliths. These data can provide powerful constraints on both carbon cycle models and ocean general circulation models. Because fish otoliths can serve as a proxy of radiocarbon in seawater dissolved inorganic carbon in all oceans and at most depths, there is considerable scope for further investigations of otolith radiocarbon in relation to both oceanography and global change. In addition to applications relevant to global change, fish otoliths are also valuable sources of information on the age, growth, and ecology of fishes, with age being among the most important parameters in population modelling and fisheries management. Use of the bomb radiocarbon chronometer to validate fish age determination methods offers considerable advantages over traditional forms of age validation and promises to become a standard tool in fish biology and fisheries management. Radiocarbon data from otoliths can also provide valuable information on the ecology of fishes and has already provided surprising information relevant to the ecology of some deep-sea fishes.

  4. Rapid local adaptation mediates zooplankton community assembly in experimental mesocosms.

    Pantel, Jelena H; Duvivier, Cathy; Meester, Luc De

    2015-10-01

    Adaptive evolution can occur over similar timescales as ecological processes such as community assembly, but its particular effects on community assembly and structure and their magnitude are poorly understood. In experimental evolution trials, Daphnia magna were exposed to varying environments (presence and absence of fish and artificial macrophytes) for 2 months. Then, in a common gardening experiment, we compared zooplankton community composition when either experimentally adapted or D. magna from the original population were present. Local adaptation of D. magna significantly altered zooplankton community composition, leading to a suppression of abundances for some zooplankton taxa and facilitation for others. The effect size of D. magna adaptation was similar to that of adding fish or macrophytes to mesocosms, two important drivers of zooplankton community structure. Our results suggest that substantial amounts of variation in community composition in natural systems may be unexplained if evolutionary dynamics are ignored. PMID:26251339

  5. MRI of fish

    Recently, rats and mice are popular and useful as an experimental model for MRI. However, MRI for fishes has been unknown. This study aimed to investigate the usefulness of living fishes as a new experimental model for MRI. MR images were collected with a spin-echo pulse sequence (SE) or echo-planar imaging pulse sequence (EPI) using 2T MR imaging system for animal. Carp, which was able to be alive for a long time in the air, was examined. Enhancement study was examined by use of Gd-DOTMA (gadolinium hydrogen alpha, alpha', alpha'', alpha'''-tetramethyl-1,4,7,10-tetraazacyclododecane-1,4,7,10-tetraacetate). On both SE and EPI images, the internal components of the head and chest in carp were clearly recognized. On the T1-weighted image acquisition time of MRI with sufficient resolution was short (in about one minute) in comparison with that of rat. The head in carp was well enhanced by administration of Gd-DOTMA on the T1-weighted image. In addition, the time course of contrast enhancement effect of images was observed after administration of Gd-DOTMA. The authors concluded that fishes, such as a carp, can be readily imaged on MRI, and could be potential in the future investigation of contrast enhancement effect and relaxation effect as a living body phantom for MRI. (author)

  6. [Lactobacilli of freshwater fishes].

    Kvasnikov, E I; Kovalenko, N K; Materinskaia, L G

    1977-01-01

    Normal microflora in the intestinal tract of fishes inhabiting fresh-water reservoirs includes lactic bacteria. The number of the bacteria depends on the animal species, the composition of food, the age, and the season. The highest number of these microorganisms (hundreds of millions per gram of the intestinal content) is found in carps. Enterococci are most often encountered in fishes inhabiting ponds: Streptococcus faecalis Andrewes a. Horder, Str. faecium Orla-Jensen, Str. bovis Orla-Jensen. Lactobacilli are more typical of fishes in water reserviors: Lactobacillus plantarum (Orla-Jensen) Bergey et al., L. casei (Orla-Jensen) Hansen a. Lessel, L. casei var. casei, L. casei var. rhamnosus, L. Casei var. alactosus, L. leichmannii (Henneberg) Bergey et al., L. acidophillus (Moro) Hansen a. Mocquot, L. Fermenti Beijerinck, L. cellobiosus Rogosa et al., L. Buchneri (Henneberg) Bergey et al. The content of lactic bacteria varies in water reservoirs; their highest content is found in ooze (tens of thousands per gram). PMID:909475

  7. Fish Synucleins: An Update

    Mattia Toni

    2015-10-01

    Full Text Available Synucleins (syns are a family of proteins involved in several human neurodegenerative diseases and tumors. Since the first syn discovery in the brain of the electric ray Torpedo californica, members of the same family have been identified in all vertebrates and comparative studies have indicated that syn proteins are evolutionary conserved. No counterparts of syns were found in invertebrates suggesting that they are vertebrate-specific proteins. Molecular studies showed that the number of syn members varies among vertebrates. Three genes encode for α-, β- and γ-syn in mammals and birds. However, a variable number of syn genes and encoded proteins is expressed or predicted in fish depending on the species. Among biologically verified sequences, four syn genes were identified in fugu, encoding for α, β and two γ (γ1 and γ2 isoforms, whereas only three genes are expressed in zebrafish, which lacks α-syn gene. The list of “non verified” sequences is much longer and is often found in sequence databases. In this review we provide an overview of published papers and known syn sequences in agnathans and fish that are likely to impact future studies in this field. Indeed, fish models may play a key role in elucidating some of the molecular mechanisms involved in physiological and pathological functions of syn proteins.

  8. Fish larvae at fronts: Horizontal and vertical distributions of gadoid fish larvae across a frontal zone at the Norwegian Trench

    Munk, Peter

    2014-09-01

    The reproduction and early life history of many fish species are linked to the physical and biological characteristics of fronts. In order to ascertain linkages between frontal physics and fish larvae, we investigated distributional differences among gadoid fish larvae comparing these to both horizontal and vertical variability in hydrography and abundances of potential copepod prey The investigation was carried out at a frontal zone along the Norwegian Trench in the northern North Sea, and was based on a series of cross-bathymetric sampling transects. Tows with a large ring net and an opening-closing net were used for describing fish larval horizontal and vertical distributions, while a submersible pump was used for describing vertical distributions of copepods. Hydrographic profiles and current velocity measurements were used to outline variability in temperature, salinity and current structure. Measurements demonstrated a distinct bottom front at the southern slope of the Trench with deepening isopycnals and high chlorphyll a concentrations. Abundances of both gadoid fish larvae and copepods peaked in vicinity of the front around mid-depth, and findings points to an inter-connection between the vertical and horizontal distributions of each species. However, the three-dimensional pattern of distribution differed significantly among species of larvae and species of copepods. The study underlines the complexity of bio-physical interrelationships in the frontal zone, and indicates that the zone encompasses specific ecological niches to which each species of fish larvae is adapted.

  9. Adaptive Fuzzy-Lyapunov Controller Using Biologically Inspired Swarm Intelligence

    Alejandro Carrasco Elizalde; Peter Goldsmith

    2008-01-01

    The collective behaviour of swarms produces smarter actions than those achieved by a single individual. Colonies of ants, flocks of birds and fish schools are examples of swarms interacting with their environment to achieve a common goal. This cooperative biological intelligence is the inspiration for an adaptive fuzzy controller developed in this paper. Swarm intelligence is used to adjust the parameters of the membership functions used in the adaptive fuzzy controller. The rules of the cont...

  10. Adaptive Image Denoising by Mixture Adaptation.

    Luo, Enming; Chan, Stanley H; Nguyen, Truong Q

    2016-10-01

    We propose an adaptive learning procedure to learn patch-based image priors for image denoising. The new algorithm, called the expectation-maximization (EM) adaptation, takes a generic prior learned from a generic external database and adapts it to the noisy image to generate a specific prior. Different from existing methods that combine internal and external statistics in ad hoc ways, the proposed algorithm is rigorously derived from a Bayesian hyper-prior perspective. There are two contributions of this paper. First, we provide full derivation of the EM adaptation algorithm and demonstrate methods to improve the computational complexity. Second, in the absence of the latent clean image, we show how EM adaptation can be modified based on pre-filtering. The experimental results show that the proposed adaptation algorithm yields consistently better denoising results than the one without adaptation and is superior to several state-of-the-art algorithms. PMID:27416593