WorldWideScience

Sample records for accessible phenotypic space

  1. Phenotype accessibility and noise in random threshold gene regulatory networks.

    Pinho, Ricardo; Garcia, Victor; Feldman, Marcus W

    2014-01-01

    Evolution requires phenotypic variation in a population of organisms for selection to function. Gene regulatory processes involved in organismal development affect the phenotypic diversity of organisms. Since only a fraction of all possible phenotypes are predicted to be accessed by the end of development, organisms may evolve strategies to use environmental cues and noise-like fluctuations to produce additional phenotypic diversity, and hence to enhance the speed of adaptation. We used a generic model of organismal development --gene regulatory networks-- to investigate how different levels of noise on gene expression states (i.e. phenotypes) may affect access to new, unique phenotypes, thereby affecting phenotypic diversity. We studied additional strategies that organisms might adopt to attain larger phenotypic diversity: either by augmenting their genome or the number of gene expression states. This was done for different types of gene regulatory networks that allow for distinct levels of regulatory influence on gene expression or are more likely to give rise to stable phenotypes. We found that if gene expression is binary, increasing noise levels generally decreases phenotype accessibility for all network types studied. If more gene expression states are considered, noise can moderately enhance the speed of discovery if three or four gene expression states are allowed, and if there are enough distinct regulatory networks in the population. These results were independent of the network types analyzed, and were robust to different implementations of noise. Hence, for noise to increase the number of accessible phenotypes in gene regulatory networks, very specific conditions need to be satisfied. If the number of distinct regulatory networks involved in organismal development is large enough, and the acquisition of more genes or fine tuning of their expression states proves costly to the organism, noise can be useful in allowing access to more unique phenotypes

  2. Fast Access to Space Tourism

    Favata', P.; Martineau, N.

    2002-01-01

    creating a revolutionary space-orbiting habitat dedicated to tourism. Up to now, such proposals have focused on two approaches. The first accounts for financial and technological constraints on space flight and living, and sacrifices creativity for practicality. The second is more utopic in nature and proposes projects, which are imaginative but unfeasible in the near future. This proposal is innovative because it considers the current obstacles to space tourism and utilizes existing technologies and infrastructures, but also includes the forethinking of futuristic commercial projects. Project Objectives: NASA claims that commercialization of space activities is so difficult that it will require decades more funding of so-called space-technology development. The benefits of this project show that this is not true. First, safety has been addressed because this proposal utilizes already space tested and assured technologies. Second, the project demonstrates potential for significant economic profit within the near future. Because we are using the least expensive technology available, we have limited start up costs. We forecast up to forty flights per year, with a potential capacity of eighty tourists. The design objectives focus on the proposal of a new approach to space tourism. These include: the expansion of the living space in the interiors, innovative and creative interior design, increased concern for the physiological and psychological comfort of tourists, and attention to entertainment possibilities. Project Content: The efficiency of the launch and configuration phase is one of the strengths of the proposed project. We propose the use of the Zenith 2 launcher, a large two-stage vehicle developed in the Soviet Union in the early 1980s, for the configuration of the orbiting platform. Following the Russian outfitting philosophy, once in orbit, the platform is already functional. The interior design is based on advanced lightweight inflatable technologies which

  3. Access to Space Interactive Design Web Site

    Leon, John; Cutlip, William; Hametz, Mark

    2000-01-01

    The Access To Space (ATS) Group at NASA's Goddard Space Flight Center (GSFC) supports the science and technology community at GSFC by facilitating frequent and affordable opportunities for access to space. Through partnerships established with access mode suppliers, the ATS Group has developed an interactive Mission Design web site. The ATS web site provides both the information and the tools necessary to assist mission planners in selecting and planning their ride to space. This includes the evaluation of single payloads vs. ride-sharing opportunities to reduce the cost of access to space. Features of this site include the following: (1) Mission Database. Our mission database contains a listing of missions ranging from proposed missions to manifested. Missions can be entered by our user community through data input tools. Data is then accessed by users through various search engines: orbit parameters, ride-share opportunities, spacecraft parameters, other mission notes, launch vehicle, and contact information. (2) Launch Vehicle Toolboxes. The launch vehicle toolboxes provide the user a full range of information on vehicle classes and individual configurations. Topics include: general information, environments, performance, payload interface, available volume, and launch sites.

  4. Global Trends in Space Access and Utilization

    Rahman, Shamim A.; Keim, Nicholas S.; Zeender, Peter E.

    2010-01-01

    In the not-so-distant past, space access and air/space technology superiority were within the purview of the U.S. and former Soviet Union's respective space agencies, both vying for global leadership in space exploitation. In more recent years, with the emergence of the European Space Agency (ESA) member countries and Asian countries joining the family of space-faring nations, it is truer now more than ever that space access and utilization has become a truly global enterprise. In fact, according to the Space Report 2007, this enterprise is a $251-billion economy. It is possible to gauge the vitality of worldwide efforts from open sources in today's transparent, media-based society. In particular, print and web broadcasters regularly report and catalog global space activities for defense and civil purposes. For the purposes of this paper, a representative catalog of missions is used to illustrate the nature of the emerging "globalization." This paper highlights global trends in terms of not only the providers of space access, but also the end-users for the various recently accomplished missions. With well over 50 launches per year, in recent years, the launch-log reveals a surprising percentage of "cooperative or co-dependent missions" where different agencies, countries, and/or commercial entities are so engaged presumably to the benefit of all who participate. Statistics are cited and used to show that recently over d0% of the 50-plus missions involved multiple nations working collectively to deliver payloads to orbit. Observers, space policy professionals, and space agency leaders have eloquently proposed that it might require the combined resources and talents of multiple nations to advance human exploration goals beyond low earth orbit. This paper does not intend to offer new information with respect to whether international collaboration is necessary but to observe that, in continuing to monitor global trends, the results seem to support the thesis that a

  5. Population structured by a space variable and a phenotypical trait

    Mirrahimi, Sepideh; Raoul, Gael

    2011-01-01

    We consider populations structured by a phenotypic trait and a space variable, in a non-homogeneous environment. In the case of sex- ual populations, we are able to derive models close to existing mod- els in theoretical biology, from a structured population model. We then analyze the dynamics of the population using a simplified model, where the population either propagates through the whole space or it survives but remains confined in a limited range. For asexual pop- ulations, we show that...

  6. Cargo Assured Access to International Space Station

    Smith, David A.

    2004-01-01

    Boeing's Cargo Assured Access logistics delivery system will provide a means to transport cargo to/from the International Space Station, Low Earth Orbit and the moon using Expendable Launch Vehicles. For Space Station, this capability will reduce cargo resupply backlog during nominal operations (e.g., supplement Shuttle, Progress, ATV and HTV) and augment cargo resupply capability during contingency operations (e.g., Shuttle delay and/or unavailability of International Partner launch or transfer vehicles). This capability can also provide an autonomous means to deliver cargo to lunar orbit, a lunar orbit refueling and work platform, and a contingency crew safe haven in support of NASA's new Exploration Initiative.

  7. Stratospheric Balloon Platforms for Near Space Access

    Dewey, R. G.

    2012-12-01

    For over five decades, high altitude aerospace balloon platforms have provided a unique vantage point for space and geophysical research by exposing scientific instrument packages and experiments to space-like conditions above 99% of Earth's atmosphere. Reaching altitudes in excess of 30 km for durations ranging from hours to weeks, high altitude balloons offer longer flight durations than both traditional sounding rockets and emerging suborbital reusable launch vehicles. For instruments and experiments requiring access to high altitudes, engineered balloon systems provide a timely, responsive, flexible, and cost-effective vehicle for reaching near space conditions. Moreover, high altitude balloon platforms serve as an early means of testing and validating hardware bound for suborbital or orbital space without imposing space vehicle qualifications and certification requirements on hardware in development. From float altitudes above 30 km visible obscuration of the sky is greatly reduced and telescopes and other sensors function in an orbit-like environment, but in 1g. Down-facing sensors can take long-exposure atmospheric measurements and images of Earth's surface from oblique and nadir perspectives. Payload support subsystems such as telemetry equipment and command, control, and communication (C3) interfaces can also be tested and operationally verified in this space-analog environment. For scientific payloads requiring over-flight of specific areas of interests, such as an active volcano or forest region, advanced mission planning software allows flight trajectories to be accurately modeled. Using both line-of-sight and satellite-based communication systems, payloads can be tracked and controlled throughout the entire mission duration. Under NASA's Flight Opportunities Program, NSC can provide a range of high altitude flight options to support space and geophysical research: High Altitude Shuttle System (HASS) - A balloon-borne semi-autonomous glider carries

  8. On the accessibility of adaptive phenotypes of a bacterial metabolic network.

    Wilfred Ndifon

    2009-08-01

    Full Text Available The mechanisms by which adaptive phenotypes spread within an evolving population after their emergence are understood fairly well. Much less is known about the factors that influence the evolutionary accessibility of such phenotypes, a pre-requisite for their emergence in a population. Here, we investigate the influence of environmental quality on the accessibility of adaptive phenotypes of Escherichia coli's central metabolic network. We used an established flux-balance model of metabolism as the basis for a genotype-phenotype map (GPM. We quantified the effects of seven qualitatively different environments (corresponding to both carbohydrate and gluconeogenic metabolic substrates on the structure of this GPM. We found that the GPM has a more rugged structure in qualitatively poorer environments, suggesting that adaptive phenotypes could be intrinsically less accessible in such environments. Nevertheless, on average approximately 74% of the genotype can be altered by neutral drift, in the environment where the GPM is most rugged; this could allow evolving populations to circumvent such ruggedness. Furthermore, we found that the normalized mutual information (NMI of genotype differences relative to phenotype differences, which measures the GPM's capacity to transmit information about phenotype differences, is positively correlated with (simulation-based estimates of the accessibility of adaptive phenotypes in different environments. These results are consistent with the predictions of a simple analytic theory that makes explicit the relationship between the NMI and the speed of adaptation. The results suggest an intuitive information-theoretic principle for evolutionary adaptation; adaptation could be faster in environments where the GPM has a greater capacity to transmit information about phenotype differences. More generally, our results provide insight into fundamental environment-specific differences in the accessibility of adaptive

  9. Population structured by a space variable and a phenotypical trait

    Mirrahimi, Sepideh

    2011-01-01

    We consider populations structured by a phenotypic trait and a space variable, in a non-homogeneous environment. In the case of sex- ual populations, we are able to derive models close to existing mod- els in theoretical biology, from a structured population model. We then analyze the dynamics of the population using a simplified model, where the population either propagates through the whole space or it survives but remains confined in a limited range. For asexual pop- ulations, we show that the dynamics are simpler. In this case, the population cannot remain confined in a limited range, i.e. the popu- lation, if it does not get extinct, propagates through the whole space.

  10. Shaping Space: The Possible and the Attainable in RNA Genotype-Phenotype Mapping

    Fontana, W; P. Schuster

    1998-01-01

    Understanding which phenotypes are accessible from which genotypes is fundamental for understanding the evolutionary process. This notion of accessibility can be used to define a relation of nearness among phenotypes, independently of their similarity. Because of neutrality, phenotypes denote equivalence classes of genotypes. The definition of neighborhood relations among phenotypes relies, therefore, on the statistics of neighborhood relations among equivalence classes of genotypes in genot...

  11. Ares Launch Vehicles Overview: Space Access Society

    Cook, Steve

    2007-01-01

    America is returning to the Moon in preparation for the first human footprint on Mars, guided by the U.S. Vision for Space Exploration. This presentation will discuss NASA's mission, the reasons for returning to the Moon and going to Mars, and how NASA will accomplish that mission in ways that promote leadership in space and economic expansion on the new frontier. The primary goals of the Vision for Space Exploration are to finish the International Space Station, retire the Space Shuttle, and build the new spacecraft needed to return people to the Moon and go to Mars. The Vision commits NASA and the nation to an agenda of exploration that also includes robotic exploration and technology development, while building on lessons learned over 50 years of hard-won experience. NASA is building on common hardware, shared knowledge, and unique experience derived from the Apollo Saturn, Space Shuttle, and contemporary commercial launch vehicle programs. The journeys to the Moon and Mars will require a variety of vehicles, including the Ares I Crew Launch Vehicle, which transports the Orion Crew Exploration Vehicle, and the Ares V Cargo Launch Vehicle, which transports the Lunar Surface Access Module. The architecture for the lunar missions will use one launch to ferry the crew into orbit, where it will rendezvous with the Lunar Module in the Earth Departure Stage, which will then propel the combination into lunar orbit. The imperative to explore space with the combination of astronauts and robots will be the impetus for inventions such as solar power and water and waste recycling. This next chapter in NASA's history promises to write the next chapter in American history, as well. It will require this nation to provide the talent to develop tools, machines, materials, processes, technologies, and capabilities that can benefit nearly all aspects of life on Earth. Roles and responsibilities are shared between a nationwide Government and industry team. The Exploration Launch

  12. 46 CFR 111.01-7 - Accessibility and spacing.

    2010-10-01

    ... 46 Shipping 4 2010-10-01 2010-10-01 false Accessibility and spacing. 111.01-7 Section 111.01-7...-GENERAL REQUIREMENTS General § 111.01-7 Accessibility and spacing. (a) The design and arrangement of electric apparatus must afford accessibility to each part as needed to facilitate proper...

  13. Transforming community access to space science models

    MacNeice, Peter; Hesse, Michael; Kuznetsova, Maria; Maddox, Marlo; Rastaetter, Lutz; Berrios, David; Pulkkinen, Antti

    2012-04-01

    Researching and forecasting the ever changing space environment (often referred to as space weather) and its influence on humans and their activities are model-intensive disciplines. This is true because the physical processes involved are complex, but, in contrast to terrestrial weather, the supporting observations are typically sparse. Models play a vital role in establishing a physically meaningful context for interpreting limited observations, testing theory, and producing both nowcasts and forecasts. For example, with accurate forecasting of hazardous space weather conditions, spacecraft operators can place sensitive systems in safe modes, and power utilities can protect critical network components from damage caused by large currents induced in transmission lines by geomagnetic storms.

  14. TUBSAT, Low Cost Access to Space Technology

    Renner, U.; Lobke-Ossenbeck, B.; P. Butz

    1993-01-01

    TUBSAT is a low cost platform for space technology experiments. Although its size is modest (micro-satellite class), it provides remarkable volume and space to the experiment. TUBSAT-A has been launched already and is not attitude controlled. TUBSAT-B and consecutive models will be provided with high accuracy (arc sec) attitude control to any desired direction via star sensor plus 3 reaction wheels. The launch of TUBSAT-B is presently scheduled for October 1993.

  15. Molecular complementarity between simple, universal molecules and ions limited phenotype space in the precursors of cells

    Norris, Vic; Reusch, Rosetta N.; IGARASHI, KAZUEI; Root-Bernstein, Robert

    2014-01-01

    Background Fundamental problems faced by the protocells and their modern descendants include how to go from one phenotypic state to another; escape from a basin of attraction in the space of phenotypes; reconcile conflicting growth and survival strategies (and thereby live on ‘the scales of equilibria’); and create a coherent, reproducible phenotype from a multitude of constituents. Presentation of the hypothesis The solutions to these problems are likely to be found with the organic and inor...

  16. GOES-R Space Weather Data: Ensuring Access and Usability

    Tilton, M.; Rowland, W. F.; Wilkinson, D. C.; Denig, W. F.; Darnel, J.; Kress, B. T.; Loto'aniu, P. T. M.; Machol, J. L.; Redmon, R. J.; Rodriguez, J. V.

    2015-12-01

    The upcoming Geostationary Operational Environmental Satellite series, GOES-R, will provide critical space weather data. These data are used to prevent communication outages, mitigate the damage solar weather causes to satellites and power grids, and reduce astronaut radiation exposure. The space weather instruments aboard GOES-R will deliver an operational dataset of unprecedented breadth. However, NOAA's National Centers for Environmental Information (NCEI)—the organization that provides access to archived GOES-R data—has faced several challenges in delivering this information to customers in usable form. For instance, the GOES-R ground system was contracted to develop higher-level products for terrestrial data but not space weather data. Variations in GOES-R data file formats and archive locations have also threatened to create an inconsistent user experience. This presentation will examine the ways in which NCEI is making GOES-R space weather data more accessible and actionable for customers. These efforts include NCEI's development of high-level data products to meet the requirements of NOAA's Space Weather Prediction Center—a role NCEI has not previously played. In addition, NCEI is creating a demonstration system to show how these products can be produced in real-time. The organization is also examining customer usage of the GOES-NOP data access system and using these access patterns to drive decisions about the GOES-R user interface.

  17. Advanced Cosmic-Ray Composition Experiment for Space Station (ACCESS): ACCESS Accommodation Study Report

    Wilson, Thomas L. (Editor); Wefel, John P. (Editor)

    1999-01-01

    In 1994 NASA Administrator selected the first high-energy particle physics experiment for the Space Station, the Alpha Magnetic Spectrometer (AMS), to place a magnetic spectrometer in Earth orbit and search for cosmic antimatter. A natural consequence of this decision was that NASA would begin to explore cost-effective ways through which the design and implementation of AMS might benefit other promising payload experiments. The first such experiment to come forward was Advanced Cosmic-Ray Composition Experiment for Space Station (ACCESS) in 1996. It was proposed as a new mission concept in space physics to attach a cosmic-ray experiment of weight, volume, and geometry similar to the AMS on the International Space Station (ISS), and replace the latter as its successor when the AMS is returned to Earth. This was to be an extension of NASA's suborbital balloon program, with balloon payloads serving as the precursor flights and heritage for ACCESS. The balloon programs have always been a cost-effective NASA resource since the particle physics instrumentation for balloon and space applications are directly related. The next step was to expand the process, pooling together expertise from various NASA centers and universities while opening up definition of the ACCESS science goals to the international community through the standard practice of peer review. This process is still ongoing, and the accommodation study presented here will discuss the baseline definition of ACCESS as we understand it today.

  18. Response to comment on "Evolutionary trade-offs, Pareto optimality, and the geometry of phenotype space".

    Shoval, Oren; Sheftel, Hila; Shinar, Guy; Hart, Yuval; Ramote, Omer; Mayo, Avi; Dekel, Erez; Kavanagh, Kathryn; Alon, Uri

    2013-02-15

    Edelaar raises concerns about the way we tested our theory. Our mathematical theorem predicts that despite the high dimensionality of trait space, trade-offs between tasks leads to phenotypes in low-dimensional regions in trait space, such as lines and triangles. We address Edelaar's questions with statistical tests that eliminate pseudoreplication concerns, finding that our predictions remain convincingly supported. PMID:23413339

  19. Integrated Ground Operations Demonstration for Responsive Space Access

    Johnson, Robert G.; Notardonato, William U.

    2014-01-01

    The NASA Advanced Exploration Systems (AES) program has a three year project to develop and demonstrate technologies to fundamentally change the way ground servicing activities support future access to space architectures. The AES Integrated Ground Operation Demonstration Units (IGODU) project has created two test beds for investigating and maturing two key elements of spaceport processing activities. The first is the GODU Integrated Refrigeration and Storage test bed that is demonstrating zero-loss storage of liquid hydrogen propellants and studying the storage and transfer of densified propellants. The second activity is the GODU Autonomous Control test bed that is implementing health management technologies and autonomous control capability of the propellant loading process to reduce the standing army of experts historically needed to ensure safe propellant loading operations. This presentation will give an overview of the activities at the Kennedy Space Center on these two test beds and its potential impact on future access to space programs.

  20. Space Division Multiple Access with a Sum Feedback Rate Constraint

    Huang, Kaibin; Heath, Jr, Robert W.; Andrews, Jeffrey G.

    2006-01-01

    On a multi-antenna broadcast channel, simultaneous transmission to multiple users by joint beamforming and scheduling is capable of achieving high throughput, which grows double logarithmically with the number of users. The sum rate for channel state information (CSI) feedback, however, increases linearly with the number of users, reducing the effective uplink capacity. To address this problem, a novel space division multiple access (SDMA) design is proposed, where the sum feedback rate is up...

  1. Advanced Cosmic Ray Composition Experiment for Space Station (ACCESS)

    Wilson, Thomas L.; Wefel, John P.

    1999-01-01

    In 1994 the first high-energy particle physics experiment for the Space Station, the Alpha Magnetic Spectrometer (AMS), was selected by NASA's Administrator as a joint collaboration with the U.S. Department of Energy (DOE). The AMS program was chartered to place a magnetic spectrometer in Earth orbit and search for cosmic antimatter. A natural consequence of this decision was that NASA would begin to explore cost-effective ways through which the design and implementation of AMS might benefit other promising payload experiments which were evolving from the Office of Space Science. The first such experiment to come forward was ACCESS in 1996. It was proposed as a new mission concept in space physics to place a cosmic-ray experiment of weight, volume, and geometry similar to the AMS on the ISS, and replace the latter as its successor when the AMS is returned to Earth. This was to be an extension of NASA's sub-orbital balloon program, with balloon payloads serving as the precursor flights and heritage for ACCESS. The balloon programs have always been a cost-effective NASA resource since the particle physics instrumentation for balloon and space applications are directly related. The next step was to expand the process, pooling together expertise from various NASA centers and universities while opening up definition of the ACCESS science goals to the international community through the standard practice of peer-review. This process is still on-going and the Accommodation Study presented here will discuss the baseline definition of ACCESS as we understand it today. Further detail on the history, scope, and background of the study is provided in Appendix A.

  2. Phenotypic and metabolic responses to drought and salinity of four contrasting lentil accessions.

    Muscolo, A; Junker, A; Klukas, C; Weigelt-Fischer, K; Riewe, D; Altmann, T

    2015-09-01

    Drought and salinity are among the major abiotic stresses which, often inter-relatedly, adversely affect plant growth and productivity. Plant stress responses depend on the type of stress, on its intensity, on the species, and also on the genotype. Different accessions of a species may have evolved different mechanisms to cope with stress and to complete their life cycles. This study is focused on lentil, an important Mediterranean legume with high quality protein for the human diet. The effects of salinity and drought on germination and early growth of Castelluccio di Norcia (CAST), Pantelleria (PAN), Ustica (UST), and Eston (EST) accessions were evaluated to identify metabolic and phenotypic traits related to drought and/or salinity stress tolerance. The results showed a relationship between imposed stresses and performance of the cultivars. According to germination frequencies, the accession ranking was as follows: NaCl resistant > susceptible, PAN > UST > CAST > EST; polyethylene glycol (PEG) resistant > susceptible, CAST > UST > EST > PAN. Seedling tolerance rankings were: NaCl resistant > susceptible, CAST ≈ UST > PAN ≈ EST; PEG resistant > susceptible, CAST > EST ≈ UST > PAN. Changes in the metabolite profiles, mainly quantitative rather than qualitative, were observed in the same cultivar in respect to the treatments, and among the cultivars under the same treatment. Metabolic differences in the stress tolerance of the different genotypes were related to a reduction in the levels of tricarboxylic acid (TCA) cycle intermediates. The relevant differences, between the most NaCl-tolerant genotype (PAN) and the most sensitive one (EST) were related to the decrease in the threonic acid level. Stress-specific metabolite indicators were also identified: ornithine and asparagine as markers of drought stress and alanine and homoserine as markers of salinity stress. PMID:25969553

  3. Emergent properties of gene evolution: Species as attractors in phenotypic space

    Reuveni, Eli; Giuliani, Alessandro

    2012-02-01

    The question how the observed discrete character of the phenotype emerges from a continuous genetic distance metrics is the core argument of two contrasted evolutionary theories: punctuated equilibrium (stable evolution scattered with saltations in the phenotype) and phyletic gradualism (smooth and linear evolution of the phenotype). Identifying phenotypic saltation on the molecular levels is critical to support the first model of evolution. We have used DNA sequences of ∼1300 genes from 6 isolated populations of the budding yeast Saccharomyces cerevisiae. We demonstrate that while the equivalent measure of the genetic distance show a continuum between lineage distance with no evidence of discrete states, the phenotypic space illustrates only two (discrete) possible states that can be associated with a saltation of the species phenotype. The fact that such saltation spans large fraction of the genome and follows by continuous genetic distance is a proof of the concept that the genotype-phenotype relation is not univocal and may have severe implication when looking for disease related genes and mutations. We used this finding with analogy to attractor-like dynamics and show that punctuated equilibrium could be explained in the framework of non-linear dynamics systems.

  4. Aviation or space policy: New challenges for the insurance sector to private human access to space

    van Oijhuizen Galhego Rosa, Ana Cristina

    2013-12-01

    The phenomenon of private human access to space has introduced a new set of problems in the insurance sector. Orbital and suborbital space transportation will surely be unique commercial services for this new market. Discussions are under way regarding space insurance, in order to establish whether this new market ought to be regulated by aviation or space law. Alongside new definitions, infrastructures, legal frameworks and liability insurances, the insurance sector has also been introducing a new approach. In this paper, I aim to analyse some of the possibilities of new premiums, capacities, and policies (under aviation or space insurance rules), as well as the new insurance products related to vehicles, passengers and third party liability. This paper claims that a change toward new insurance regimes is crucial, due to the current stage in development of space tourism and the urgency to adapt insurance rules to support future development in this area.

  5. Innovative Airbreathing Propulsion Concepts for Access to Space

    Whitlow, Jr., Woodrow; Blech, Richard A.; Blankson, Isaiah M.

    2001-01-01

    This paper will present technologies and concepts for novel aeropropulsion systems. These technologies will enhance the safety of operations, reduce life cycle costs, and contribute to reduced costs of air travel and access to space. One of the goals of the NASA program is to reduce the carbon-dioxide emissions of aircraft engines. Engine concepts that use highly efficient fuel cell/electric drive technologies in hydrogen-fueled engines will be presented in the proposed paper. Carbon-dioxide emissions will be eliminated by replacing hydrocarbon fuel with hydrogen, and reduce NOx emissions through better combustion process control. A revolutionary exoskeletal engine concept, in which the engine drum is rotated, will be shown. This concept has the potential to allow a propulsion system that can be used for subsonic through hypersonic flight. Dual fan concepts that have ultra-high bypass ratios, low noise, and low drag will be presented. Flow-controlled turbofans and control-configured turbofans also will be discussed. To increase efficiency, a system of microengines distributed along lifting surfaces and on the fuselage is being investigated. This concept will be presented in the paper. Small propulsion systems for affordable, safe personal transportation vehicles will be discussed. These low-oil/oilless systems use technologies that enable significant cost and weight reductions. Pulse detonation engine-based hybrid-cycle and combined-cycle propulsion systems for aviation and space access will be presented.

  6. Phenotypic, genomic, transcriptomic and proteomic changes in Bacillus cereus after a short-term space flight

    Su, Longxiang; Zhou, Lisha; Liu, Jinwen; Cen, Zhong; Wu, Chunyan; Wang, Tong; Zhou, Tao; Chang, De; Guo, Yinghua; Fang, Xiangqun; Wang, Junfeng; Li, Tianzhi; Yin, Sanjun; Dai, Wenkui; Zhou, Yuping; Zhao, Jiao; Fang, Chengxiang; Yang, Ruifu; Liu, Changting

    2014-01-01

    The environment in space could affect microorganisms by changing a variety of features, including proliferation rate, cell physiology, cell metabolism, biofilm production, virulence, and drug resistance. However, the relevant mechanisms remain unclear. To explore the effect of a space environment on Bacillus cereus, a strain of B. cereus was sent to space for 398 h by ShenZhou VIII from November 1, 2011 to November 17, 2011. A ground simulation with similar temperature conditions was simultaneously performed as a control. After the flight, the flight and control strains were further analyzed using phenotypic, genomic, transcriptomic and proteomic techniques to explore the divergence of B. cereus in a space environment. The flight strains exhibited a significantly slower growth rate, a significantly higher amikacin resistance level, and changes in metabolism relative to the ground control strain. After the space flight, three polymorphic loci were found in the flight strains LCT-BC25 and LCT-BC235. A combined transcriptome and proteome analysis was performed, and this analysis revealed that the flight strains had changes in genes/proteins relevant to metabolism. In addition, certain genes/proteins that are relevant to structural function, gene expression modification and translation, and virulence were also altered. Our study represents the first documented analysis of the phenotypic, genomic, transcriptomic, and proteomic changes that occur in B. cereus during space flight, and our results could be beneficial to the field of space microbiology.

  7. Enabling Dedicated, Affordable Space Access Through Aggressive Technology Maturation

    Jones, Jonathan; Kibbey, Tim; Lampton, Pat; Brown, Thomas

    2014-01-01

    A recent explosion in nano-sat, small-sat, and university class payloads has been driven by low cost electronics and sensors, wide component availability, as well as low cost, miniature computational capability and open source code. Increasing numbers of these very small spacecraft are being launched as secondary payloads, dramatically decreasing costs, and allowing greater access to operations and experimentation using actual space flight systems. While manifesting as a secondary payload provides inexpensive rides to orbit, these arrangements also have certain limitations. Small, secondary payloads are typically included with very limited payload accommodations, supported on a non interference basis (to the prime payload), and are delivered to orbital conditions driven by the primary launch customer. Integration of propulsion systems or other hazardous capabilities will further complicate secondary launch arrangements, and accommodation requirements. The National Aeronautics and Space Administration's Marshall Space Flight Center has begun work on the development of small, low cost launch system concepts that could provide dedicated, affordable launch alternatives to small, risk tolerant university type payloads and spacecraft. These efforts include development of small propulsion systems and highly optimized structural efficiency, utilizing modern advanced manufacturing techniques. This paper outlines the plans and accomplishments of these efforts and investigates opportunities for truly revolutionary reductions in launch and operations costs. Both evolution of existing sounding rocket systems to orbital delivery, and the development of clean sheet, optimized small launch systems are addressed. A launch vehicle at the scale and price point which allows developers to take reasonable risks with new propulsion and avionics hardware solutions does not exist today. Establishing this service provides a ride through the proverbial "valley of death" that lies between

  8. Laboratory science with space data accessing and using space-experiment data

    van Loon, Jack J W A; Zell, Martin; Beysens, Daniel

    2011-01-01

    For decades experiments conducted on space stations like MIR and the ISS have been gathering data in many fields of research in the natural sciences, medicine and engineering. The European Union-sponsored ULISSE project focused on exploring the wealth of unique experimental data provided by revealing raw and metadata from these studies via an Internet Portal. This book complements the portal. It serves as a handbook of space experiments and describes the various types of experimental infrastructure areas of research in the life and physical sciences and technology space missions that hosted scientific experiments the types and structures of the data produced and how one can access the data through ULISSE for further research. The book provides an overview of the wealth of space experiment data that can be used for additional research and will inspire academics (e.g. those looking for topics for their PhD thesis) and research departments in companies for their continued development.

  9. Cafe Variome: general-purpose software for making genotype-phenotype data discoverable in restricted or open access contexts.

    Lancaster, Owen; Beck, Tim; Atlan, David; Swertz, Morris; Thangavelu, Dhiwagaran; Veal, Colin; Dalgleish, Raymond; Brookes, Anthony J

    2015-10-01

    Biomedical data sharing is desirable, but problematic. Data "discovery" approaches-which establish the existence rather than the substance of data-precisely connect data owners with data seekers, and thereby promote data sharing. Cafe Variome (http://www.cafevariome.org) was therefore designed to provide a general-purpose, Web-based, data discovery tool that can be quickly installed by any genotype-phenotype data owner, or network of data owners, to make safe or sensitive content appropriately discoverable. Data fields or content of any type can be accommodated, from simple ID and label fields through to extensive genotype and phenotype details based on ontologies. The system provides a "shop window" in front of data, with main interfaces being a simple search box and a powerful "query-builder" that enable very elaborate queries to be formulated. After a successful search, counts of records are reported grouped by "openAccess" (data may be directly accessed), "linkedAccess" (a source link is provided), and "restrictedAccess" (facilitated data requests and subsequent provision of approved records). An administrator interface provides a wide range of options for system configuration, enabling highly customized single-site or federated networks to be established. Current uses include rare disease data discovery, patient matchmaking, and a Beacon Web service. PMID:26224250

  10. Individual-based models for adaptive diversification in high-dimensional phenotype spaces.

    Ispolatov, Iaroslav; Madhok, Vaibhav; Doebeli, Michael

    2016-02-01

    Most theories of evolutionary diversification are based on equilibrium assumptions: they are either based on optimality arguments involving static fitness landscapes, or they assume that populations first evolve to an equilibrium state before diversification occurs, as exemplified by the concept of evolutionary branching points in adaptive dynamics theory. Recent results indicate that adaptive dynamics may often not converge to equilibrium points and instead generate complicated trajectories if evolution takes place in high-dimensional phenotype spaces. Even though some analytical results on diversification in complex phenotype spaces are available, to study this problem in general we need to reconstruct individual-based models from the adaptive dynamics generating the non-equilibrium dynamics. Here we first provide a method to construct individual-based models such that they faithfully reproduce the given adaptive dynamics attractor without diversification. We then show that a propensity to diversify can be introduced by adding Gaussian competition terms that generate frequency dependence while still preserving the same adaptive dynamics. For sufficiently strong competition, the disruptive selection generated by frequency-dependence overcomes the directional evolution along the selection gradient and leads to diversification in phenotypic directions that are orthogonal to the selection gradient. PMID:26598329

  11. Developing hybrid near-space technologies for affordable access to suborbital space

    Badders, Brian David

    High power rockets and high altitude balloons are two near-space technologies that could be combined in order to provide access to the mesosphere and, eventually, suborbital space. This "rockoon" technology has been used by several large budget space programs before being abandoned in favor of even more expensive, albeit more accurate, ground launch systems. With the increased development of nano-satellites and atmospheric sensors, combined with rising interest in global atmospheric data, there is an increase in desire for affordable access to extreme altitudes that does not necessarily require the precision of ground launches. Development of hybrid near-space technologies for access to over 200k ft. on a small budget brings many challenges within engineering, systems integration, cost analysis, market analysis, and business planning. This research includes the design and simulation testing of all the systems needed for a safe and reusable launch system, the cost analysis for initial production, the development of a business plan, and the development of a marketing plan. This project has both engineering and scientific significance in that it can prove the space readiness of new technologies, raise their technology readiness levels (TRLs), expedite the development process, and also provide new data to the scientific community. It also has the ability to stimulate university involvement in the aerospace industry and help to inspire the next generation of workers in the space sector. Previous development of high altitude balloon/high power rocket hybrid systems have been undertaken by government funded military programs or large aerospace corporations with varying degrees of success. However, there has yet to be a successful flight with this type of system which provides access to the upper mesosphere in a university setting. This project will aim to design and analyze a viable system while testing the engineering process under challenging budgetary constraints. The

  12. Dynamics of sexual populations structured by a space variable and a phenotypical trait

    Mirrahimi, Sepideh

    2013-03-01

    We study sexual populations structured by a phenotypic trait and a space variable, in a non-homogeneous environment. Departing from an infinitesimal model, we perform an asymptotic limit to derive the system introduced in Kirkpatrick and Barton (1997). We then perform a further simplification to obtain a simple model. Thanks to this simpler equation, we can describe rigorously the dynamics of the population. In particular, we provide an explicit estimate of the invasion speed, or extinction speed of the species. Numerical computations show that this simple model provides a good approximation of the original infinitesimal model, and in particular describes quite well the evolution of the species\\' range. © 2013 Elsevier Inc.

  13. Phenotype and seed production among hyacinth bean (Lablab purpureus L. Sweet) accessions rescued using hydroponic techniques

    Hyacinth bean, Lablab purpureus L. (Sweet) is a legume used as a vegetable, forage, and in home gardens as an ornamental plant. Many accessions do not flower during their juvenile period in Byron, GA. Other hyacinth bean accessions produce few seed when regenerated in the field. This study was condu...

  14. Phenotypic and RAPD diversity among 80 germplasm accessions of the medicinal plant isabgol (Plantago ovata, Plantaginaceae).

    Singh, N; Lal, R K; Shasany, A K

    2009-01-01

    Plantago ovata, popularly known as isabgol, has great commercial and medicinal importance due to thin rosy white membranous seed husk. Isabgol seeds and husks have emollient, demulcent and laxative properties. We used both biometric and molecular techniques to assess the genetic variability and relatedness of 80 germplasm accessions of Plantago spp (P. ovata, P. lanceolata, and P. major) collected both from India and abroad. The range of D2 values (2.01-4890.73) indicated a very high degree of divergence among the accessions. Based on the degree of divergence, 80 accessions/genotypes were grouped into seven clusters. Thirty-six accessions were analyzed through RAPD profiling for similarity and genetic distances, using 20 random primers. Intraspecific differences in all three species were smaller [range for P. ovata (2-17%), P. lanceolata (3-15%), P. major (2-11%)] than interspecific diversity. These highly divergent lines could be used to produce superior hybrids. PMID:19876869

  15. The Accessible City: Employment Opportunities in Time and Space

    Scott, Lauren M.

    1999-01-01

    Explosive suburban employment growth, broad processes of economic restructuring, and rapid developments in transportation and telecommunications technologies have fundamentally altered the spatial and organizational composition of both where we work and where we live. How have these broad spatial processes impacted intra-metropolitan accessibility? The research presents an analytical framework for evaluating and monitoring intra-metropolitan accessibility to employment opportunities. More spe...

  16. Affordable Access to Space (AAS): Affordable Vehicle Avionics Project

    National Aeronautics and Space Administration — Affordable Vehicle Avionics (AVA) is being developed at NASA Ames Research Center and is sponsored by Space Technology Mission Directorate (STMD) Game Changing...

  17. Analysis of optimal phenotypic space using elementary modes as applied to Corynebacterium glutamicum

    Venkatesh KV

    2006-10-01

    Full Text Available Abstract Background Quantification of the metabolic network of an organism offers insights into possible ways of developing mutant strain for better productivity of an extracellular metabolite. The first step in this quantification is the enumeration of stoichiometries of all reactions occurring in a metabolic network. The structural details of the network in combination with experimentally observed accumulation rates of external metabolites can yield flux distribution at steady state. One such methodology for quantification is the use of elementary modes, which are minimal set of enzymes connecting external metabolites. Here, we have used a linear objective function subject to elementary modes as constraint to determine the fluxes in the metabolic network of Corynebacterium glutamicum. The feasible phenotypic space was evaluated at various combinations of oxygen and ammonia uptake rates. Results Quantification of the fluxes of the elementary modes in the metabolism of C. glutamicum was formulated as linear programming. The analysis demonstrated that the solution was dependent on the criteria of objective function when less than four accumulation rates of the external metabolites were considered. The analysis yielded feasible ranges of fluxes of elementary modes that satisfy the experimental accumulation rates. In C. glutamicum, the elementary modes relating to biomass synthesis through glycolysis and TCA cycle were predominantly operational in the initial growth phase. At a later time, the elementary modes contributing to lysine synthesis became active. The oxygen and ammonia uptake rates were shown to be bounded in the phenotypic space due to the stoichiometric constraint of the elementary modes. Conclusion We have demonstrated the use of elementary modes and the linear programming to quantify a metabolic network. We have used the methodology to quantify the network of C. glutamicum, which evaluates the set of operational elementary modes at

  18. Park, Beach, Open Space, or Coastline Access 2010

    U.S. Department of Health & Human Services — This table contains data on the percent of residents within ½ mile of a park, beach, open space, or coastline, for California, its regions, counties, cities/towns,...

  19. Park, Beach, Open Space, or Coastline Access 2010

    U.S. Department of Health & Human Services — This table contains data on the percent of residents within ½ mile of a park, beach, open space, or coastline, for California, its regions, counties, cities/towns,...

  20. Transformational Technologies to Expedite Space Access and Development

    Rather, John D. G.

    2010-01-01

    Throughout history the emergence of new technologies has enabled unforeseen breakthrough capabilities that rapidly transformed the world. Some global examples from the twentieth century include AC electric power, nuclear energy, and turbojet engines. At the systems level, success of both Apollo and the Space Shuttle programs depended upon taming hydrogen propulsion and developing high-temperature atmospheric reentry materials. Human space development now is stymied because of a great need for breakthrough technologies and strategies. It is believed that new capabilities exist within the present states-of-the-art of superconducting technology that can be implemented to transform the future of human space development. This paper is an overview of three other papers presented within this forum, which summarizes the principles and consequences of StarTram, showing how the resulting breakthrough advantages can lead directly to safe space tourism and massive development of the moon, Mars and the outer solar system. StarTram can implement cost-effective solar power from space, simple utilization of asteroid material to protect humans from ionizing radiation, and effective defense of the Earth from devastating cosmic impacts. Synergistically, StarTram technologies will revolutionize ground transportation on the Earth, leading to enormous reduction in energy consumption and creation of millions of jobs. High energy lasers will also be discussed because of their importance to power beaming applications.

  1. Transformational Technologies to Expedite Space Access and Development

    Throughout history the emergence of new technologies has enabled unforeseen breakthrough capabilities that rapidly transformed the world. Some global examples from the twentieth century include AC electric power, nuclear energy, and turbojet engines. At the systems level, success of both Apollo and the Space Shuttle programs depended upon taming hydrogen propulsion and developing high-temperature atmospheric reentry materials. Human space development now is stymied because of a great need for breakthrough technologies and strategies. It is believed that new capabilities exist within the present states-of-the-art of superconducting technology that can be implemented to transform the future of human space development. This paper is an overview of three other papers presented within this forum, which summarizes the principles and consequences of StarTram, showing how the resulting breakthrough advantages can lead directly to safe space tourism and massive development of the moon, Mars and the outer solar system. StarTram can implement cost-effective solar power from space, simple utilization of asteroid material to protect humans from ionizing radiation, and effective defense of the Earth from devastating cosmic impacts. Synergistically, StarTram technologies will revolutionize ground transportation on the Earth, leading to enormous reduction in energy consumption and creation of millions of jobs. High energy lasers will also be discussed because of their importance to power beaming applications.

  2. Update on NASA Space Shuttle Earth Observations Photography on the laser videodisc for rapid image access

    Lulla, Kamlesh

    1994-01-01

    There have been many significant improvements in the public access to the Space Shuttle Earth Observations Photography Database. New information is provided for the user community on the recently released videodisc of this database. Topics covered included the following: earlier attempts; our first laser videodisc in 1992; the new laser videodisc in 1994; and electronic database access.

  3. A systematic comparison of feature space effects on disease classifier performance for phenotype identification of five diseases.

    Kotfila, Christopher; Uzuner, Özlem

    2015-12-01

    Automated phenotype identification plays a critical role in cohort selection and bioinformatics data mining. Natural Language Processing (NLP)-informed classification techniques can robustly identify phenotypes in unstructured medical notes. In this paper, we systematically assess the effect of naive, lexically normalized, and semantic feature spaces on classifier performance for obesity, atherosclerotic cardiovascular disease (CAD), hyperlipidemia, hypertension, and diabetes. We train support vector machines (SVMs) using individual feature spaces as well as combinations of these feature spaces on two small training corpora (730 and 790 documents) and a combined (1520 documents) training corpus. We assess the importance of feature spaces and training data size on SVM model performance. We show that inclusion of semantically-informed features does not statistically improve performance for these models. The addition of training data has weak effects of mixed statistical significance across disease classes suggesting larger corpora are not necessary to achieve relatively high performance with these models. PMID:26241355

  4. Access over ownership – a typology of shared space

    Brinkø, Rikke; Nielsen, Susanne Balslev; Meel, Juriaan van

    Purpose – This paper aims to explore shared use of space and facilities as a concept, and present and illustrate the use of a typology to help classify and describe the different options for sharing space and facilities within buildings for optimised use of a building portfolio. Design...... actors from two cases in Denmark and an illustration case from Ireland. Findings – The typology classifies and describes four archetypes of sharing between different people, building owners and organisations, to be used when discussing, planning, establishing and evaluating new and existing shared spaces....... Research limitations/implications – The typology is the result of a first exploration of shared use of facilities and does not claim to be fully comprehensive or final. Practical implications – The typology is intended for both researchers and practitioners, and aims at increasing the understanding of...

  5. Evaluation Method for Accessibility to Hollow Space of Carbon Nanotubes

    Fan, Jing; Yudasaka, Masako; Miyawaki, Jin; Iijima, Sumio

    2004-03-01

    For application of single-wall carbon nanotubes (SWNTs) and nanohorns (SWNHs) to material-storage media, holes are opened usually by oxidation through which materials enter inside the hollow space of tubes. The holes are known to pass only molecules with diameters smaller than those of the holes, thus molecular-size selective storage of gases inside tubes becomes possible [1]. To enhance utilities of inner hollow space of carbon nanoutbes, controlled opening of holes is important. It is especially so for SWNHs, because holes with various diameters are potentially available due to the various types of defects on the tube walls. We studied the methods of hole-opening for SWNHs, and, at the same time, developed simple methods for evaluating the sizes of holes and the volumes of inner hollow-spaces. [1] Murata et al. J. Phys.Chem.

  6. Accessing Heritage Documents according to Space Criteria within Digital Libraries

    Marquesuzaà, Christophe; Etcheverry, Patrick; Sallaberry, Christian; Baziz, Mustapha

    2008-01-01

    International audience Local cultural heritage document collections are characterized by contents strongly attached to a territory and its associated land history. Our contribution aims at enhancing such a content retrieval process efficiently each time a query includes geographic criteria. We propose a unified model for a formal representation of geographic information. This geographic model allows space features to be described independently of their representation mode (text, graphics) ...

  7. Space Vision: Making Astronomy Accessible to Visually Impaired Students

    Ries, J. G.; Baguio, M. R.; Jurgens, T. D.; Pruett, K. M.

    2004-05-01

    Astronomy, with good reason, is thought of as a visual science. Spectacular images of deep space objects or other worlds of our solar system inspire public interest in Astronomy. People encounter news about the universe during their daily life. Developing concepts about celestial objects presents an extra challenge of abstraction for people with visual impairments. The Texas Space Grant Consortium with educators at the Texas School for the Blind and Visually Impaired have developed a 2 day workshop to be held in April 2004 to help students with visual impairments understand these concepts. Hands-on activities and experiments will emphasize non-visual senses. For example, students will learn about: - Constellations as historical ways of finding one's way across the sky. - The size and structure of the Solar System by building a scale model on a running track. They will also: - Plan a planetary exploration mission. - Explore wave phenomenon using heat and sound waves. In preparation for the workshop we worked with teens involved in the countywide 4-H Teens Leading with Character (TLC) program to create the tactile materials necessary for the activities. The teens attended solar system education training so they would have the skills necessary to make the tactile displays to be used during the workshop. The results and evaluation of the workshop will be presented at the meeting. Touch the Universe: A NASA Braille Book of Astronomy inspired this workshop, and it is supported by HST Grant HST-ED-90255.01-A.

  8. Access to everyday activities in public space : views of people with dementia

    Brorsson, Anna

    2013-01-01

    The general aim of this thesis was to increase knowledge about problematic situations in public space as experienced by community-dwelling people with dementia, and about how they meet these situations when doing everyday activities there. The aim also included increasing knowledge about transactions between people with dementia and public space. In Study I experiences of accessibility in public space in people with AD were illuminated, with particular focus on places, situations and ac...

  9. SINP space physics data storage and access system

    Barinova, Vera; Kalegaev, Vladimir; Parunakian, David

    In this paper we present the system for automated data retrieval and processing developed in the the Skobeltsyn Institute of Nuclear Physics. Telemetry data files containing scientific information (e.g. charged particle fluxes) are auto-matically parsed and stored in our Oracle database immediately upon arrival. Parsed telemetry files, metadata, instrument technical information and orbital parameters are also stored. Most of the data can be accessed via our public FTP server. Users can preview the data available for time intervals and channels of interest using the web interface provided. The preview plot building software has also been developed in-house. This system has been successfully used in 2009 with the following spacecraft and instru-ments: Electron-M-Pesca at Coronas-Photon (Electrons 200KeV -4 MeV+; Protons : 4 MeV -80MeV+ ;α : 5 -24 MeV/nucleon; CNO : 6 -15MeV/nucleon), DUFIK at Tatiana-2 (electrons, infrared 600nm ¡ ¡ 700nm and ultraviolet 300nm ¡ ¡ 400nm), MSGI and SKL at Meteor-M (10 spectral channels: 0,5-12,5 µm ). The data collections are available at http://smdc.sinp.msu.ru for visual preview and download.

  10. Considerations on private human access to space from an institutional point of view

    Hufenbach, Bernhard

    2013-12-01

    Private human access to space as discussed in this article addresses two market segments: suborbital flight and crew flights to Low Earth Orbit. The role of entrepreneurs, the technical complexity, the customers, the market conditions as well as the time to market in these two segments differ significantly. Space agencies take currently a very different approach towards private human access to space in both segments. Analysing the outcome of broader inter-agency deliberations on the future of human spaceflight and exploration, performed e.g. in the framework of the International Space Exploration Coordination Group, enables to derive some common general views on this topic. Various documents developed by inter-agency working groups recognise the general strategic importance for enabling private human access to space for ensuring a sustainable future of human spaceflight, although the specific definition of private human access and approaches vary. ESA has performed some reflections on this subject throughout the last 5 years. While it gained through these reflections a good understanding on the opportunities and implications resulting from the development of capabilities and markets for Private Human Access, limited concrete activities have been initiated in relation to this topic as of today.

  11. Exploring the phenotypic space of non-Saccharomyces wine yeast biodiversity.

    Rossouw, Debra; Bauer, Florian F

    2016-05-01

    Tremendous microbial diversity exists in vineyards, and the potential to harness this diversity for novel mixed or pure starter cultures for wine fermentation has received significant attention in recent years. However, most studies are limited to a small subset of strains and species. Here we present data from a systematic screen of 91 yeast isolates from South African grape must and vineyard samples for oenologically relevant traits. One focus area was finding non-Saccharomyces isolates showing both reduced ethanol yields, as well as improved aromatic characteristics. Of the 91 isolates evaluated initially, 21 showed lower ethanol yields when compared to commercial wine yeast strain controls. Collectively, the metabolic data (primary fermentation and secondary aroma compounds) highlight the enormity of the 'phenotypic space' of yeast communities in South African vineyards. The data also emphasise intraspecies variability, challenging our concept of species typicity. Of particular oenological interest was the ability of several isolates to produce high levels of terpenoid compounds. A few strains were ultimately found which showed a substantial reduction (>1.5%) in the final ethanol content of sequential fermentations, as well as unique aroma compound production profiles. Four of these strains were selected for comprehensive wine trials in both red and white grape musts, complete with microbial, chemical and sensory analyses of the red wines. This presents, for the first time, a full bench-to-bottle characterisation of non-Saccharomyces strains showing the most potential for commercial application. The findings of this study enlarge the potential range of oenological applications for non-Saccharomyces yeast, while also suggesting the potential usefulness of several yeast species that have previously not been considered for winemaking applications. PMID:26742614

  12. Hybrid fibre and free-space optical solutions in optical access networks

    Mbah, Afamefuna Maduka

    2016-01-01

    This thesis evaluates the potentials of hybrid fibre and free space optical (FSO) communications access networks in providing a possible solution to an all optical access network. In such network architectures, the FSO link can extend the system to areas where an optical fibre link is not feasible, and/or provide limited mobility for indoor coverage. The performance of hybrid fibre and FSO (HFFSO) networks based on digital pulse position modulation (DPPM), for both the indoor and outdoor envi...

  13. A suite of methods for representing activity space in a healthcare accessibility study

    Gesler Wilbert M

    2005-10-01

    Full Text Available Abstract Background "Activity space" has been used to examine how people's habitual movements interact with their environment, and can be used to examine accessibility to healthcare opportunities. Traditionally, the standard deviational ellipse (SDE, a Euclidean measure, has been used to represent activity space. We describe the construction and application of the SDE at one and two standard deviations, and three additional network-based measures of activity space using common tools in GIS: the road network buffer (RNB, the 30-minute standard travel time polygon (STT, and the relative travel time polygon (RTT. We compare the theoretical and methodological assumptions of each measure, and evaluate the measures by examining access to primary care services, using data from western North Carolina. Results Individual accessibility is defined as the availability of healthcare opportunities within that individual's activity space. Access is influenced by the shape and area of an individual's activity space, the spatial distribution of opportunities, and by the spatial structures that constrain and direct movement through space; the shape and area of the activity space is partly a product of how it is conceptualized and measured. Network-derived measures improve upon the SDE by incorporating the spatial structures (roads that channel movement. The area of the STT is primarily influenced by the location of a respondent's residence within the road network hierarchy, with residents living near primary roads having the largest activity spaces. The RNB was most descriptive of actual opportunities and can be used to examine bypassing. The area of the RTT had the strongest correlation with a healthcare destination being located inside the activity space. Conclusion The availability of geospatial technologies and data create multiple options for representing and operationalizing the construct of activity space. Each approach has its strengths and limitations

  14. Astronaut Ross Approaches Assembly Concept for Construction of Erectable Space Structure (ACCESS)

    1999-01-01

    The crew assigned to the STS-61B mission included Bryan D. O'Conner, pilot; Brewster H. Shaw, commander; Charles D. Walker, payload specialist; mission specialists Jerry L. Ross, Mary L. Cleave, and Sherwood C. Spring; and Rodolpho Neri Vela, payload specialist. Launched aboard the Space Shuttle Atlantis November 28, 1985 at 7:29:00 pm (EST), the STS-61B mission's primary payload included three communications satellites: MORELOS-B (Mexico); AUSSAT-2 (Australia); and SATCOM KU-2 (RCA Americom). Two experiments were conducted to test assembling erectable structures in space: EASE (Experimental Assembly of Structures in Extravehicular Activity), and ACCESS (Assembly Concept for Construction of Erectable Space Structure). In a joint venture between NASA/Langley Research Center in Hampton, Virginia, and the Marshall Space Flight Center (MSFC), EASE and ACCESS were developed and demonstrated at MSFC's Neutral Buoyancy Simulator (NBS). In this STS-61B onboard photo, astronaut Ross, perched on the Manipulator Foot Restraint (MFR) approaches the erected ACCESS. The primary objective of these experiments was to test the structural assembly concepts for suitability as the framework for larger space structures and to identify ways to improve the productivity of space construction.

  15. ACCESS TO PUBLIC OPEN SPACE: IS DISTRIBUTION EQUITABLE ACROSS DIFFERENT SOCIO-ECONOMIC AREAS

    Mohammad Javad Koohsari

    2011-12-01

    Full Text Available During the past decade, the role of the built environment on physical activity has been well investigated by public health, transportation and urban design scholars and it has been shown that different aspects of the built environment can influence physical activity Public open spaces (POS like parks have many health benefits and they can be important settings and destinations for having physical activity. Inequality in access to POS which may influence the amount of physical activity can be a reason for lower physical activity among deprived neighbourhoods. This paper aims to examine whether objective access to public open spaces (POS like parks is equally across the different socio-economic status (SES areas in the City of Melbourne. Objective access to POS was measured in network distance using geographic information systems (GIS and area SES was obtained using the SEIFA (Socio-Economic Indexes for Areas index. The results showed there was a significant difference in access to POS according to the SES areas. There was a significant negative correlation between the access to POS and the SES areas in which lower SES areas had poorer access to POS in comparison with the higher ones.

  16. Nanotube structures, methods of making nanotube structures, and methods of accessing intracellular space

    VanDersarl, Jules J.; Xu, Alexander M.; Melosh, Nicholas A.; Tayebi, Noureddine

    2016-02-23

    In accordance with the purpose(s) of the present disclosure, as embodied and broadly described herein, embodiments of the present disclosure, in one aspect, relate to methods of making a structure including nanotubes, a structure including nanotubes, methods of delivering a fluid to a cell, methods of removing a fluid to a cell, methods of accessing intracellular space, and the like.

  17. Making Astronomy and Space Science Accessible to the Blind and Visually Impaired

    Beck-Winchatz, B.; Hoette, V.; Grice, N.

    2003-12-01

    One of the biggest obstacles blind and visually impaired people face in science is the ubiquity of important graphical information, which is generally not made available in alternate formats accessible to them. Funded by NASA's Initiative to Develop Education through Astronomy and Space Science (IDEAS), we have recently formed a team of scientists and educators from universities, the SOFIA NASA mission, a science museum, an observatory, and schools for the blind. Our goal is to develop and test Braille/tactile space science activities that actively engage students from elementary grades through introductory college-level in space science. We will discuss effective strategies and low-cost technologies that can be used to make graphical information accessible. We will also demonstrate examples, such a thermal expansion graphics created from telescope images of the Moon and other celestial objects, a tactile planisphere, three-dimensional models of near-Earth asteroids and tactile diagrams of their orbits, and an infrared detector activity.

  18. Chemogenomics approaches for receptor deorphanization and extensions of the chemogenomics concept to phenotypic space

    Horst, E. van der; Peironcely, J.E.; Westen, G.J.P. van; Hoven, O.O. van den; Galloway, W.R.J.D.; Spring, D.R.; Wegner, J.K.; Vlijmen, H.W.T. van; Ijzerman, A.P.; Overington, J.P.; Bender, A.

    2011-01-01

    Chemogenomic approaches, which link ligand chemistry to bioactivity against targets (and, by extension, to phenotypes) are becoming more and more important due to the increasing number of bioactivity data available both in proprietary databases as well as in the public domain. In this article we rev

  19. Probing the reproducibility of leaf growth and molecular phenotypes: A comparison of three Arabidopsis accessions cultivated in ten laboratories

    Massonnet, Catherine; Vile, Denis; Fabre, Juliette; Hannah, Matthew A; Caldana, C.; Lisec, J.; Beemster, G.T.S.; Meyer, R. C.; Messerli, G.; Gronlund, J.T.; Perkovic, J.; Wigmore, E.; May, S.; Bevan, M. W.; Meyer, Christian

    2010-01-01

    A major goal of the life sciences is to understand how molecular processes control phenotypes. Because understanding biological systems relies on the work of multiple laboratories, biologists implicitly assume that organisms with the same genotype will display similar phenotypes when grown in comparable conditions. We investigated to what extent this holds true for leaf growth variables and metabolite and transcriptome profiles of three Arabidopsis (Arabidopsis thaliana) genotypes grown in 10...

  20. Comment on "Evolutionary trade-offs, Pareto optimality, and the geometry of phenotype space".

    Edelaar, Pim

    2013-02-15

    Shoval et al. (Reports, 1 June 2012, p. 1157) showed how configurations of phenotypes may identify tasks that trade off with each other, using randomizations assuming independence of data points. I argue that this assumption may not be correct for most and possibly all examples and led to pseudoreplication and inflated significance levels. Improved statistical testing is necessary to assess how the theory applies to empirical data. PMID:23413338

  1. TV Black-space Spectrum Access for Wireless Local Area and Cellular Networks

    Beyene, Yihenew Dagne

    2012-01-01

    This thesis presents a black-space spectrum access scheme for overlay cognitive radio in TV band. Physical layer implementations of secondary systems using software defined radio technology have been proposed. We consider two types of secondary transmitters with WLAN-type and LTE-type frame structures in order to study the impact of secondary transmission over primary pilot carriers on performances of channel estimation and interference cancellation algorithms. Bit error rate has been used...

  2. Based on asynchronous communication protocol of geographic space information service access mechanism research

    G. Chen; Zhao, J.; Gu, M; Li, D.

    2014-01-01

    At present, the traditional way of accessing to classified network in geographic spatial information services is using network gatekeeper and firewall etc. to ensure public and classified network communications links. However, the physical isolation between classified network and public network is crossed, which is bound to cause classified network potential security hazard. In Yunnan province space Land dynamic monitoring integration project, it proposed the point to point text m...

  3. ACCESS TO PUBLIC OPEN SPACE: IS DISTRIBUTION EQUITABLE ACROSS DIFFERENT SOCIO-ECONOMIC AREAS

    Mohammad Javad Koohsari

    2011-01-01

    During the past decade, the role of the built environment on physical activity has been well investigated by public health, transportation and urban design scholars and it has been shown that different aspects of the built environment can influence physical activity Public open spaces (POS) like parks have many health benefits and they can be important settings and destinations for having physical activity. Inequality in access to POS which may influence the amount of physical activity can be...

  4. Rocket-Based Combined-Cycle Propulsion Technology for Access-to-Space Applications

    Hueter, Uwe

    1999-01-01

    NASA's Office of Aero-Space Technology (OAST) established three major goals, referred to as, "The Three Pillars for Success". The Advanced Space Transportation Program Office (ASTP) at the NASA's Marshall Space Flight Center (MSFC) in Huntsville, Ala. focuses on future space transportation technologies under the "Access to Space" pillar. One of the main activities over the past three years has been on advancing the hydrogen fueled rocket-based combined cycle (RBCC) technologies. The RBCC effort that was completed early this year was the initial step leading to flight demonstrations of the technology for space launch vehicle propulsion. Aerojet and Boeing-Rocketdyne designed, built and ground tested their RBCC engine concepts. In addition, ASTROX, Georgia Institute of Technology, McKinney Associates, Pennsylvania State University (PSU), and University of Alabama in Huntsville conducted supporting activities. The RBCC activity included ground testing of components (e.g., injectors, thrusters, ejectors and inlets) and integrated flowpaths. Inlet testing was performed at the Lewis Research Center's 1 x 1 wind tunnel. All direct connect and free-jet engine testing were conducted at the GASL facilities on Long Island, New York. Testing spanned the Mach range from sea level static to Mach 8. Testing of the rocket-only mode, simulating the final phase of the ascent mission profile, was also performed. The originally planned work on these contracts was completed in 1999. Follow-on activities have been initiated for both hydrogen and hydrocarbon fueled RBCC concepts. Studies to better understand system level issues with the integration of RBCC propulsion with earth-to-orbit vehicles have also been conducted. This paper describes the status, progress and future plans of the RBCC activities funded by NASA/MSFC with a major focus on the benefits of utilizing air-breathing combined-cycle propulsion in access-to-space applications.

  5. Exploring the Unknown: Selected Documents in the History of the U.S. Civil Space Program. Volume 4; Accessing Space

    Logsdon, John M. (Editor); Williamson, Ray A. (Editor); Launius, Roger D. (Editor); Acker, Russell J. (Editor); Garber, Stephen J. (Editor); Friedman, Jonathan L. (Editor)

    1999-01-01

    The documents selected for inclusion in this volume are presented in four major chapters, each covering a particular aspect of access to space and the manner in which it has developed over time. These chapters focus on the evolution toward the giant Saturn V rocket, the development of the Space Shuttle, space transportation commercialization, and future space transportation possibilities. Each chapter in this volume is introduced by an overview essay, prepared by individuals who are particularly well qualified to write on the topic. In the main, these essays are intended to introduce and complement the documents in the chapter and to place them, for the most part, in a chronological and substantive context. Each essay contains references to the documents in the chapter it introduces, and many also contain references to documents in other chapters of the collection. These introductory essays are the responsibility of their individual authors, and the views and conclusions contained therein do not necessarily represent the opinions of either George Washington University or NASA.

  6. URSA MAIOR: a One Liter Nanosatellite Bus for Low Cost Access to Space

    Santoni, F.

    One of the main limitations in the access to space for developing countries is the economical effort typically required by space missions. Secondly, space activity is a field of very high technology, requiring technical skills, education and practice, at a level which is seldom reached by developing countries. Interventions aimed to facilitate access to space for developing countries should be focussed primarily on the missions allowing access to space at reasonable cost. Moreover, perhaps more importantly, they should emphasize conducting the mission design, construction, ground testing and operation in orbit as an open activity, accessible to developing countries personnel, in order to set up an education process, which is not just selling a product ready satellite. Universities could have a very important role in this activity. Many Universities around the world have designed, built and launched small satellites. Università di Roma "La Sapienza" set up a program for the construction of small satellites in an academic environment, involving directly the students in the design, construction, ground testing and operation in orbit. The first satellite built in the framework of this program, UNISAT, was successfully launched in September 2000. The second, UNISAT-2, initially scheduled for launch in 2001, has been delayed by the launch provider to late 2002. These two satellites, based on a modular design, emphasizing ease of construction and assembly, weight roughly 10 kg. The realization of these satellites was made possible within the regular financing given to university research programs, keeping down cost by the use of commercial off the shelf components instead of space rated ones. The microsatellite experience at Università di Roma "La Sapienza", is going further with the development of a new nanosatellite bus, URSA MAIOR (Università di Roma "la SApienza" Micro Autonomous Imager in ORbit), aiming at cutting down cost and possibly improving performance. The

  7. GRASP: analysis of genotype–phenotype results from 1390 genome-wide association studies and corresponding open access database

    Leslie, Richard; O’Donnell, Christopher J.; Johnson, Andrew D.

    2014-01-01

    Summary: We created a deeply extracted and annotated database of genome-wide association studies (GWAS) results. GRASP v1.0 contains >6.2 million SNP-phenotype association from among 1390 GWAS studies. We re-annotated GWAS results with 16 annotation sources including some rarely compared to GWAS results (e.g. RNAediting sites, lincRNAs, PTMs).

  8. Novel Phenotypic Outcomes Identified for a Public Collection of Approved Drugs from a Publicly Accessible Panel of Assays.

    Jonathan A Lee

    Full Text Available Phenotypic assays have a proven track record for generating leads that become first-in-class therapies. Whole cell assays that inform on a phenotype or mechanism also possess great potential in drug repositioning studies by illuminating new activities for the existing pharmacopeia. The National Center for Advancing Translational Sciences (NCATS pharmaceutical collection (NPC is the largest reported collection of approved small molecule therapeutics that is available for screening in a high-throughput setting. Via a wide-ranging collaborative effort, this library was analyzed in the Open Innovation Drug Discovery (OIDD phenotypic assay modules publicly offered by Lilly. The results of these tests are publically available online at www.ncats.nih.gov/expertise/preclinical/pd2 and via the PubChem Database (https://pubchem.ncbi.nlm.nih.gov/ (AID 1117321. Phenotypic outcomes for numerous drugs were confirmed, including sulfonylureas as insulin secretagogues and the anti-angiogenesis actions of multikinase inhibitors sorafenib, axitinib and pazopanib. Several novel outcomes were also noted including the Wnt potentiating activities of rotenone and the antifolate class of drugs, and the anti-angiogenic activity of cetaben.

  9. A new open-source Python-based Space Weather data access, visualization, and analysis toolkit

    de Larquier, S.; Ribeiro, A.; Frissell, N. A.; Spaleta, J.; Kunduri, B.; Thomas, E. G.; Ruohoniemi, J.; Baker, J. B.

    2013-12-01

    Space weather research relies heavily on combining and comparing data from multiple observational platforms. Current frameworks exist to aggregate some of the data sources, most based on file downloads via web or ftp interfaces. Empirical models are mostly fortran based and lack interfaces with more useful scripting languages. In an effort to improve data and model access, the SuperDARN community has been developing a Python-based Space Science Data Visualization Toolkit (DaViTpy). At the center of this development was a redesign of how our data (from 30 years of SuperDARN radars) was made available. Several access solutions are now wrapped into one convenient Python interface which probes local directories, a new remote NoSQL database, and an FTP server to retrieve the requested data based on availability. Motivated by the efficiency of this interface and the inherent need for data from multiple instruments, we implemented similar modules for other space science datasets (POES, OMNI, Kp, AE...), and also included fundamental empirical models with Python interfaces to enhance data analysis (IRI, HWM, MSIS...). All these modules and more are gathered in a single convenient toolkit, which is collaboratively developed and distributed using Github and continues to grow. While still in its early stages, we expect this toolkit will facilitate multi-instrument space weather research and improve scientific productivity.

  10. Ethernet access network based on free-space optic deployment technology

    Gebhart, Michael; Leitgeb, Erich; Birnbacher, Ulla; Schrotter, Peter

    2004-06-01

    The satisfaction of all communication needs from single households and business companies over a single access infrastructure is probably the most challenging topic in communications technology today. But even though the so-called "Last Mile Access Bottleneck" is well known since more than ten years and many distribution technologies have been tried out, the optimal solution has not yet been found and paying commercial access networks offering all service classes are still rare today. Conventional services like telephone, radio and TV, as well as new and emerging services like email, web browsing, online-gaming, video conferences, business data transfer or external data storage can all be transmitted over the well known and cost effective Ethernet networking protocol standard. Key requirements for the deployment technology driven by the different services are high data rates to the single customer, security, moderate deployment costs and good scalability to number and density of users, quick and flexible deployment without legal impediments and high availability, referring to the properties of optical and wireless communication. We demonstrate all elements of an Ethernet Access Network based on Free Space Optic distribution technology. Main physical parts are Central Office, Distribution Network and Customer Equipment. Transmission of different services, as well as configuration, service upgrades and remote control of the network are handled by networking features over one FSO connection. All parts of the network are proven, the latest commercially available technology. The set up is flexible and can be adapted to any more specific need if required.

  11. An Indoor Space Partition Method and its Fingerprint Positioning Optimization Considering Pedestrian Accessibility

    Xu, Yue; Shi, Yong; Zheng, Xingyu; Long, Yi

    2016-06-01

    Fingerprint positioning method is generally the first choice in indoor navigation system due to its high accuracy and low cost. The accuracy depends on partition density to the indoor space. The accuracy will be higher with higher grid resolution. But the high grid resolution leads to significantly increasing work of the fingerprint data collection, processing and maintenance. This also might decrease the performance, portability and robustness of the navigation system. Meanwhile, traditional fingerprint positioning method use equational grid to partition the indoor space. While used for pedestrian navigation, sometimes a person can be located at the area where he or she cannot access. This paper studied these two issues, proposed a new indoor space partition method considering pedestrian accessibility, which can increase the accuracy of pedestrian position, and decrease the volume of the fingerprint data. Based on this proposed partition method, an optimized algorithm for fingerprint position was also designed. A across linker structure was used for fingerprint point index and matching. Experiment based on the proposed method and algorithm showed that the workload of fingerprint collection and maintenance were effectively decreased, and poisoning efficiency and accuracy was effectively increased

  12. Virtual Mission Operations of Remote Sensors With Rapid Access To and From Space

    Ivancic, William D.; Stewart, Dave; Walke, Jon; Dikeman, Larry; Sage, Steven; Miller, Eric; Northam, James; Jackson, Chris; Taylor, John; Lynch, Scott; Heberle, Jay

    2010-01-01

    This paper describes network-centric operations, where a virtual mission operations center autonomously receives sensor triggers, and schedules space and ground assets using Internet-based technologies and service-oriented architectures. For proof-of-concept purposes, sensor triggers are received from the United States Geological Survey (USGS) to determine targets for space-based sensors. The Surrey Satellite Technology Limited (SSTL) Disaster Monitoring Constellation satellite, the United Kingdom Disaster Monitoring Constellation (UK-DMC), is used as the space-based sensor. The UK-DMC s availability is determined via machine-to-machine communications using SSTL s mission planning system. Access to/from the UK-DMC for tasking and sensor data is via SSTL s and Universal Space Network s (USN) ground assets. The availability and scheduling of USN s assets can also be performed autonomously via machine-to-machine communications. All communication, both on the ground and between ground and space, uses open Internet standards.

  13. ESPAS: the European e-science platform to access near-Earth space data (Invited)

    Belehaki, A.; Hapgood, M. A.; Ritschel, B.; Manola, N.

    2013-12-01

    The aim of ESPAS platform is to integrate heterogeneous data from the earth's thermosphere, ionosphere, plasmasphere and magnetosphere. ESPAS supports the systematic exploration of multipoint measurements from the near-Earth space through homogenised access to multi-instrument data. It provides access to more than 40 datasets: Cluster, EISCAT, GIRO, DIAS, SWACI, CHAMP, SuperDARN, FPI, magnetometers INGV, SGO, DTU, IMAGE, TGO, IMAGE/RPI, ACE, SOHO, PROBA2, NOAA/POES, etc. The concept of extensibility to new data sets is an important element in the ESPAS architecture. Within the first year of the project, the main components of the system have been developed, namely, the data model, the XML schemas for metadata exchange format, the ontology, the wrapper installed at the data nodes so that the main platform harvest the metadata, the main platform built on the D-NET framework and the GUI with its designed workflows. The first working prototype supports the search for datasets among a selected number of databases (i.e., EDAM, DIAS, Cluster, SWACI data). The next immediate step would be the implementation of search for characteristics within the datasets. For the second release we are planning to deploy tools for conjunctions between ground-space and space-space and for coincidences. For the final phase of the project the ESPAS infrastructure will be extensively tested through the application of several use cases, designed to serve the needs of the wide interdisciplinary users and producers communities, such as the ionospheric, thermospheric, magnetospheric, space weather and space climate communities, the geophysics community, the space communications engineering, HF users, satellite operators, navigation and surveillance systems, and space agencies. The final ESPAS platform is expected to be delivered in 2015. The abstract is submitted on behalf of the ESPAS-FP7EU team (http://www.espas-fp7.eu): Mike Hapgood, Anna Belehaki, Spiros Ventouras, Natalia Manola, Antonis

  14. Effective use of multibeam antenna and space-time multiple access technology in modern mobile communication systems

    Moskalets, N. V.

    2015-01-01

    A possibility for efficient use of radio-frequency spectrum and of corresponding increase in productivity of mobile communication system with space-time multiple access obtained by use of multibeam antenna of base station is considered.

  15. Genetic variability for phenotype, seed production, oil content, and fatty acid composition among 17 Roselle (Hibiscus sabdariffa) accessions

    Seed oil and fatty acids in plants have human health implications. Oil from roselle (Hibiscus sabdariffa L.) seeds are used in Taiwan as a diuretic, laxative, and tonic. The objectives of this study were to evaluate seeds from 17 roselle accessions for oil and fatty acid variation in a greenhouse. S...

  16. Minimally Invasive Subcortical Parafascicular Transsulcal Access for Clot Evacuation (Mi SPACE for Intracerebral Hemorrhage

    Benjamin Ritsma

    2014-01-01

    Full Text Available Background. Spontaneous intracerebral hemorrhage (ICH is common and causes significant mortality and morbidity. To date, optimal medical and surgical intervention remains uncertain. A lack of definitive benefit for operative management may be attributable to adverse surgical effect, collateral tissue injury. This is particularly relevant for ICH in dominant, eloquent cortex. Minimally invasive surgery (MIS offers the potential advantage of reduced collateral damage. MIS utilizing a parafascicular approach has demonstrated such benefit for intracranial tumor resection. Methods. We present a case of dominant hemisphere spontaneous ICH evacuated via the minimally invasive subcortical parafascicular transsulcal access clot evacuation (Mi SPACE model. We use this report to introduce Mi SPACE and to examine the application of this novel MIS paradigm. Case Presentation. The featured patient presented with a left temporal ICH and severe global aphasia. The hematoma was evacuated via the Mi SPACE approach. Postoperative reassessments showed significant improvement. At two months, bedside language testing was normal. MRI tractography confirmed limited collateral injury. Conclusions. This case illustrates successful application of the Mi SPACE model to ICH in dominant, eloquent cortex and subcortical regions. MRI tractography illustrates collateral tissue preservation. Safety and feasibility studies are required to further assess this promising new therapeutic paradigm.

  17. Accessible Spaces in Inclusive Schools Espacios accesibles en la escuela inclusiva

    María Julieta Solórzano Salas

    2013-03-01

    Full Text Available This literature review is focused on physical accessibility, a basic requirement in educational institutions to ensure that all members of the education community have access to inclusive settings, where they can exercise their duties and rights by themselves. In addition, it summarizes theoretical proposals –the universal design, for instance–, which can guide staff members from these institutions and professionals related to space management, in assessing and achieving appropriate spaces. Recibido 11 de setiembre de 2012 •  Corregido 28 de febrero de 2013 • Aceptado 13 de marzo de 2013Este artículo de revisión bibliográfica trata, específicamente, el tópico de la accesibilidad física, requerimiento indispensable en las instituciones educativas para garantizar entornos inclusivos que permitan, a las personas integrantes de la comunidad educativa, el ejercicio autónomo de sus deberes y derechos. Además, se sintetizan propuestas teóricas –como  el diseño universal–, las cuales pueden guiar, en la valoración y consecución de espacios accesibles, al personal de las instituciones educativas y a profesionales vinculados con la gestión del espacio.

  18. ACCESS - A Science and Engineering Assessment of Space Coronagraph Concepts for the Direct Imaging and Spectroscopy of Exoplanetary Systems

    Trauger, John

    2008-01-01

    Topics include and overview, science objectives, study objectives, coronagraph types, metrics, ACCESS observatory, laboratory validations, and summary. Individual slides examine ACCESS engineering approach, ACCESS gamut of coronagraph types, coronagraph metrics, ACCESS Discovery Space, coronagraph optical layout, wavefront control on the "level playing field", deformable mirror development for HCIT, laboratory testbed demonstrations, high contract imaging with the HCIT, laboratory coronagraph contrast and stability, model validation and performance predictions, HCIT coronagraph optical layout, Lyot coronagraph on the HCIT, pupil mapping (PIAA), shaped pupils, and vortex phase mask experiments on the HCIT.

  19. Accessing Solar Irradiance Data via LISIRD, the Laboratory for Atmospheric and Space Physics Interactive Solar Irradiance Datacenter

    Pankratz, C. K.; Wilson, A.; Snow, M. A.; Lindholm, D. M.; Woods, T. N.; Traver, T.; Woodraska, D.

    2015-12-01

    The LASP Interactive Solar Irradiance Datacenter, LISIRD, http://lasp.colorado.edu/lisird, allows the science community and the public to explore and access solar irradiance and related data sets using convenient, interactive or scriptable, standards-based interfaces. LISIRD's interactive plotting allows users to investigate and download irradiance data sets from a variety of sources, including space missions, ground observatories, and modeling efforts. LISIRD's programmatic interfaces allow software-level data retrievals and facilitate automation. This presentation will describe the current state of LISIRD, provide details of the data sets it serves, outline data access methods, identify key technologies in-use, and address other related aspects of serving spectral and other time series data. We continue to improve LISIRD by integrating new data sets, and also by advancing its data management and presentation capabilities to meet evolving best practices and community needs. LISIRD is hosted and operated by the Laboratory for Atmospheric and Space Physics, LASP, which has been a leader in Atmospheric and Heliophysics science for over 60 years. LASP makes a variety of space-based measurements of solar irradiance, which provide crucial input for research and modeling in solar-terrestrial interactions, space physics, planetary, atmospheric, and climate sciences. These data sets consist of fundamental measurements, composite data sets, solar indices, space weather products, and models. Current data sets available through LISIRD originate from the SORCE, SDO (EVE), UARS (SOLSTICE), TIMED (SEE), and SME space missions, as well as several other space and ground-based projects. LISIRD leverages several technologies to provide flexible and standards-based access to the data holdings available through LISIRD. This includes internet-accessible interfaces that permit data access in a variety of formats, data subsetting, as well as program-level access from data analysis

  20. Sounding Rockets within Swedish National Balloon and Rocket Programme- Providing Access to Space from Esrange

    Sjolander, K.; Karlsson, T.; Lockowandt, C.

    2015-09-01

    Initiated in 2012 by the Swedish National Space Board (SNSB), a new programme dedicated for Swedish scientists to gain access to space using balloons and sounding rockets was started. This programme promotes the possibility to ensure continuity in both the science and the technology used. The sounding rocket part of this national programme started with three possible missions. SPIDER (Small Payloads for Investigation of Disturbances in Electrojet by Rockets) from the Space and Plasma physics department of KTH, 0-STATES (Oxygen Species and Thermospheric Airglow in The Earth's Sky) from the Department of Meteorology Stockholm University (MISU) and LEEWAVES (Local Excitation and Effects of Waves on Atmospheric VErtical Structure) that is collaboration between KTH and MISU. These three missions were planned for launches in 2015 and 2016. SSc has been contracted on a launch ticket basis to provide the launch and service to the scientific instrumentation. This paper presents the SPIDER, 0-STATES and LEEWAVES missions focussing on a mission related technical solutions perspective.

  1. Creating Assemblies in Media Space: Recent Developments in Enhancing Access to Workspaces

    Luff, Paul; Kuzuoka, Hideaki; Heath, Christian; Yamazaki, Keiichi; Yamashita, Jun

    In this chapter, we discuss a programme of social and technical research that we have undertaken over the last few years concerned with the design, assessment and development of systems to support real-time, distributed work; work that relies upon a participants' ability to access a range of tangible and digital resources. The programme of work has been informed by findings from a range of studies of work and collaboration in environments that include architectural practices, control centres, surgeries, hospitals, news rooms, and the like. These studies have a framework of considerations, criteria, and insights into the organization of everyday work and interaction that have enabled us to identify some of the limitations of con¬ventional media spaces, including systems which we have helped develop, and to pose a set of requirements and challenges, which we believe are fundamental to the creation of a media space that could support the flexible and contingent demands of seemingly simple forms of collaborative work. These studies, coupled with the development and assessment of a series of experimental systems, have enabled us to identify three key issues that we believe have to be addressed and resolved (in one way or another) if media space research is going to achieve its early potential.

  2. Construction and accessibility of a cross-species phenotype ontology along with gene annotations for biomedical research [v1; ref status: indexed, http://f1000r.es/p5

    Sebastian Köhler

    2013-02-01

    Full Text Available Phenotype analyses, e.g. investigating metabolic processes, tissue formation, or organism behavior, are an important element of most biological and medical research activities. Biomedical researchers are making increased use of ontological standards and methods to capture the results of such analyses, with one focus being the comparison and analysis of phenotype information between species. We have generated a cross-species phenotype ontology for human, mouse and zebra fish that contains zebrafish phenotypes. We also provide up-to-date annotation data connecting human genes to phenotype classes from the generated ontology. We have included the data generation pipeline into our continuous integration system ensuring stable and up-to-date releases. This article describes the data generation process and is intended to help interested researchers access both the phenotype annotation data and the associated cross-species phenotype ontology. The resource described here can be used in sophisticated semantic similarity and gene set enrichment analyses for phenotype data across species. The stable releases of this resource can be obtained from http://purl.obolibrary.org/obo/hp/uberpheno/.

  3. Development and Application of an Activity Based Space-Time Accessibility Measure for Individual Activity Schedules

    Ashiru, Olu; Polak, John; Noland, Robert B.

    2003-01-01

    Accessibility is an important aspect of human existence impacting on our notion of society equity and justice. It plays an important role in a number of existing theories of spatial and travel behaviour in addition to affecting the rate and the pattern of land-use development. However despite the importance of the notion of accessibility, the accessibility measures, which have traditionally been used to quantify accessibility, have tended to be relatively poorly defined, excluding a wide rang...

  4. Acoustic omni meta-atom for top-down, decoupled access to all octants of a wave parameter space

    Koo, Sukmo; Jeong, Jun-ho; Park, Namkyoo

    2016-01-01

    The common behavior of a wave is determined by wave parameters of its medium, which are generally associated with the characteristic oscillations of its corresponding elementary particles. In the context of metamaterials, the decoupled excitation of these fundamental oscillations would provide an ideal platform for top-down and reconfigurable access to the entire space of constitutive wave parameters; however, this has remained as a conceivable problem that must be accomplished, after being pointed out by Pendry. Here, by focusing on acoustic metamaterials, we achieve the decoupling of density $\\rho$ , modulus B$^{-1}$, and bianisotropy {\\xi} near the Dirac point, by separating the paths of particle momentum to conform to the characteristic oscillations of each macroscopic wave parameter. Independent access to all octants of wave parameter space ($\\rho$ , B$^{-1}$, $\\xi$) = (+/-,+/-,+/-) is thus realized using a single platform that we call an omni meta-atom; as a building block that achieves top-down access ...

  5. Design Space Toolbox V2: Automated Software Enabling a Novel Phenotype-Centric Modeling Strategy for Natural and Synthetic Biological Systems.

    Lomnitz, Jason G; Savageau, Michael A

    2016-01-01

    Mathematical models of biochemical systems provide a means to elucidate the link between the genotype, environment, and phenotype. A subclass of mathematical models, known as mechanistic models, quantitatively describe the complex non-linear mechanisms that capture the intricate interactions between biochemical components. However, the study of mechanistic models is challenging because most are analytically intractable and involve large numbers of system parameters. Conventional methods to analyze them rely on local analyses about a nominal parameter set and they do not reveal the vast majority of potential phenotypes possible for a given system design. We have recently developed a new modeling approach that does not require estimated values for the parameters initially and inverts the typical steps of the conventional modeling strategy. Instead, this approach relies on architectural features of the model to identify the phenotypic repertoire and then predict values for the parameters that yield specific instances of the system that realize desired phenotypic characteristics. Here, we present a collection of software tools, the Design Space Toolbox V2 based on the System Design Space method, that automates (1) enumeration of the repertoire of model phenotypes, (2) prediction of values for the parameters for any model phenotype, and (3) analysis of model phenotypes through analytical and numerical methods. The result is an enabling technology that facilitates this radically new, phenotype-centric, modeling approach. We illustrate the power of these new tools by applying them to a synthetic gene circuit that can exhibit multi-stability. We then predict values for the system parameters such that the design exhibits 2, 3, and 4 stable steady states. In one example, inspection of the basins of attraction reveals that the circuit can count between three stable states by transient stimulation through one of two input channels: a positive channel that increases the count

  6. Augmentation of Virtual Space Physics Observatory Services to Expand Data Access Capabilities Project

    National Aeronautics and Space Administration — Aquilent, Inc. proposes to support the effort of Virtual Space Physics Observatory (VSPO) by developing services to expand the VSPO search capabilities, developing...

  7. Neptune modular rockets for breakthrough low-cost space access Project

    National Aeronautics and Space Administration — Interorbital Systems is developing a new generation of modular, low-cost, rapid-response space launch vehicles. Interorbital modular rockets core element is the...

  8. Acoustic omni meta-atom for top-down, decoupled access to all octants of a wave parameter space

    Koo, Sukmo; Cho, Choonlae; Jeong, Jun-ho; Park, Namkyoo

    2016-01-01

    The common behavior of a wave is determined by wave parameters of its medium, which are generally associated with the characteristic oscillations of its corresponding elementary particles. In the context of metamaterials, the decoupled excitation of these fundamental oscillations would provide an ideal platform for top-down and reconfigurable access to the entire space of constitutive wave parameters; however, this has remained as a conceivable problem that must be accomplished, after being p...

  9. Internet access to the web resources of a geographically distributed system of near-and deep-space monitoring

    Chernenkov, V. N.; Vitkovskij, V. V.; Kalinina, N. A.

    2007-12-01

    The state and speed characteristics of Web access to the first five nodes of the projected geographically distributed system of scientific monitoring of near and deep space are analyzed. The possibility of developing an architecture involving user query redirection to a caching server is studied. This will make it possible to relieve hardware communication links substantially and speed up HTTP connection time, especially for nodes linked via heavily congested Internet links.

  10. Asynchronous Free-Space Optical CDMA Communications System for Last-mile Access Network

    Jurado-Navas, Antonio; Raddo, Thiago R.; Sanches, Anderson L.;

    2016-01-01

    We propose a new hybrid asynchronous OCDMA-FSO communications system for access network solutions. New ABER expressions are derived under gamma-gamma scintillation channels, where all users can surprisingly achieve error-free transmissions when FEC is employed....

  11. Perception of available space during chimpanzee introductions: Number of accessible areas is more important than enclosure size.

    Herrelko, Elizabeth S; Buchanan-Smith, Hannah M; Vick, Sarah-Jane

    2015-01-01

    Restricting animals to different areas of their enclosure, for both brief and extended durations, is a key element of animal management practices. With such restrictions, available space decreases and the choices the animals can make are more limited, particularly in relation to social dynamics. When unfamiliar individuals are introduced to each other, group dynamics can be unpredictable and understanding space usage is important to facilitate successful introductions. We studied the behavioral, welfare-related responses of two groups of zoo-housed chimpanzees (n = 22) as they were introduced to each other and experienced a variety of enclosure restrictions and group composition changes. Our analysis of available space while controlling for chimpanzee density, found that arousal-related scratching and yawning decreased as the number of enclosure areas (separate rooms) available increased, whereas only yawning decreased as the amount of available space (m(2)) increased. Allogrooming, rubbing, and regurgitation/reingestion rates remained constant as both the number of enclosure areas and amount of space changed. Enclosure space is important to zoo-housed chimpanzees, but during introductions, a decrease in arousal-related scratching indicates that the number of accessible areas is more important than the total amount of space available, suggesting that it is important to provide modular enclosures that provide choice and flexible usage, to minimize the welfare impact of short- and long-term husbandry needs. PMID:26235989

  12. The Role of Associations in Women's Access to Public Space through work

    Flahault, Erika

    2010-01-01

    Working women are the social norm today in France. However, inequalities between men and women remain stark. In such a context, this paper will consider the role of associations in women's access to the labour market. Indeed, the non-profit sector seems to be conducive to women's employment. Recent investigations, conducted by economists or sociologists, confirm this. On the one hand, 70% of associations' employees are women in France; associations provide access to employment, including for ...

  13. Exploring the complete mutational space of the LDL receptor LA5 domain using molecular dynamics: linking SNPs with disease phenotypes in familial hypercholesterolemia.

    Angarica, Vladimir Espinosa; Orozco, Modesto; Sancho, Javier

    2016-03-15

    Familial hypercholesterolemia (FH), a genetic disorder with a prevalence of 0.2%, represents a high-risk factor to develop cardiovascular and cerebrovascular diseases. The majority and most severe FH cases are associated to mutations in the receptor for low-density lipoproteins receptor (LDL-r), but the molecular basis explaining the connection between mutation and phenotype is often unknown, which hinders early diagnosis and treatment of the disease. We have used atomistic simulations to explore the complete SNP mutational space (227 mutants) of the LA5 repeat, the key domain for interacting with LDL that is coded in the exon concentrating the highest number of mutations. Four clusters of mutants of different stability have been identified. The majority of the 50 FH known mutations (33) appear distributed in the unstable clusters, i.e. loss of conformational stability explains two-third of FH phenotypes. However, one-third of FH phenotypes (17 mutations) do not destabilize the LR5 repeat. Combining our simulations with available structural data from different laboratories, we have defined a consensus-binding site for the interaction of the LA5 repeat with LDL-r partner proteins and have found that most (16) of the 17 stable FH mutations occur at binding site residues. Thus, LA5-associated FH arises from mutations that cause either the loss of stability or a decrease in domain's-binding affinity. Based on this finding, we propose the likely phenotype of each possible SNP in the LA5 repeat and outline a procedure to make a full computational diagnosis for FH. PMID:26755827

  14. Is there an association between spatial access to parks/green space and childhood overweight/obesity in Calgary, Canada?

    Potestio Melissa L

    2009-11-01

    Full Text Available Abstract Background The recent increase in childhood obesity is expected to add significantly to the prevalence of chronic diseases. We used multivariate multilevel analysis to examine associations between parks/green space and childhood overweight/obesity across communities in Calgary, Canada, a city characterized by intensified urban sprawl and high car use. Methods Body Mass Index was calculated from measured height and weight data obtained from 6,772 children (mean age = 4.95 years attending public health clinics for pre-school vaccinations. Each child's home postal code was geocoded using ESRI ArcGIS 9.2. We examined four measures of spatial access to parks/green space (based on Geographic Information Systems: 1 the number of parks/green spaces per 10,000 residents, 2 the area of parks/green space as a proportion of the total area within a community, 3 average distance to a park/green space, and 4 the proportion of parks/green space service area as a proportion of the total area within a community. Analyses were adjusted for dissemination area median family income (as a proxy for an individual child's family income community-level education, and community-level proportion of visible minorities. Results In general, parks/green space at the community level was not associated with overweight/obesity in Calgary, with the exception of a marginally significant effect whereby a moderate number of parks/green spaces per 10,000 residents was associated with lower odds of overweight/obesity. This effect was non-significant in adjusted analyses. Conclusion Our null findings may reflect the popularity of car travel in Calgary, Canada and suggest that the role built environment characteristics play in explaining health outcomes may differ depending on the type of urban environment being studied.

  15. Near-Earth Object Human Space Flight Accessible Targets Study (NHATS)

    National Aeronautics and Space Administration — This list of potential mission targets should not be interpreted as a complete list of viable NEAs for an actual human exploration mission. As the NEA orbits are...

  16. RASCAL: DARPA’s Solution to Responsive, Affordable, Micro-Satellite Space Access

    Carter, Preston; Brown, Owen; Rice, Tharen; Tardy, Jason

    2003-01-01

    RASCAL is a revolutionaryspace access program initiated by the Defense Advanced Research Projects Agency (DARPA). RASCAL will demonstrate the capability to launch microsatellites into low earth orbit routinelyand onshort notice using an air-launch systemarchitecture. A propulsion enhancement – Mass Injection Pre-Compressor Cooling (MIPCC) - allows the air vehicle toobtain high-energyflight conditions and provides the capability for exo-atmospheric staging ofan expendable rocket with satellite...

  17. The place of receptionists in access to primary care: Challenges in the space between community and consultation.

    Neuwelt, Pat M; Kearns, Robin A; Browne, Annette J

    2015-05-01

    At the point of entry to the health care system sit general practice receptionists (GPRs), a seldom studied employment group. The place of the receptionist involves both a location within the internal geography of the clinic and a position within the primary care team. Receptionists literally 'receive' those who phone or enter the clinic, and are a critical influence in their transformation from a 'person' to a 'patient'. This process occurs in a particular space: the 'waiting room'. We explore the waiting room and its dynamics in terms of 'acceptability', an under-examined aspect of access to primary care. We ask 'How do GPRs see their role with regard to patients with complex health and social needs, in light of the spatio-temporal constraints of their working environments?' We engaged receptionists as participants to explore perceptions of their roles and their workspaces, deriving narrative data from three focus groups involving 14 GPRs from 11 practices in the Northland region of New Zealand. The study employed an adapted form of grounded theory. Our findings indicate that GPRs are on the edge of the practice team, yet carry a complex role at the frontline, in the waiting space. They are de facto managers of this space; however, they have limited agency within general practice settings, due to the constraints imposed upon them by physical and organisational structures. The agency of GPRs is most evident in their ability to shape the social dynamics of the waiting space, and to frame the health care experience as positive for people whose usual experience is marginalisation. We conclude that, if well supported, receptionists have the potential to positively influence health care acceptability, and patients' access to care. PMID:25455478

  18. The Falcon Launch Vehicle - An Attempt at Making Access to Space More Affordable, Reliable and Pleasant

    Musk, Elon; Koenigsmann, Hans; Gurevich, Gwynne

    2003-01-01

    Falcon is a mostly reusable, two stage, liquid oxygen and kerosene powered launch vehicle being built by Space Exploration Technologies (SpaceX) from the ground up. The vehicle is designed above all for high reliability, followed by low cost and a benign flight environment. Launched from Vandenberg, a standard Falcon can carry over 470 kg to a 700 km sun-synchronous orbit and a heavy Falcon can deliver 1450 kg to the same orbit. To minimize failure modes, the vehicle has the minimum pragmatic...

  19. GeneLab: NASA's Open Access, Collaborative Platform for Systems Biology and Space Medicine

    Berrios, Daniel C.; Thompson, Terri G.; Fogle, Homer W.; Rask, Jon C.; Coughlan, Joseph C.

    2015-01-01

    NASA is investing in GeneLab1 (http:genelab.nasa.gov), a multi-year effort to maximize utilization of the limited resources to conduct biological and medical research in space, principally aboard the International Space Station (ISS). High-throughput genomic, transcriptomic, proteomic or other omics analyses from experiments conducted on the ISS will be stored in the GeneLab Data Systems (GLDS), an open-science information system that will also include a biocomputation platform with collaborative science capabilities, to enable the discovery and validation of molecular networks.

  20. Predicting phenotypic diversity and the underlying quantitative molecular transitions.

    Claudiu A Giurumescu

    2009-04-01

    Full Text Available During development, signaling networks control the formation of multicellular patterns. To what extent quantitative fluctuations in these complex networks may affect multicellular phenotype remains unclear. Here, we describe a computational approach to predict and analyze the phenotypic diversity that is accessible to a developmental signaling network. Applying this framework to vulval development in C. elegans, we demonstrate that quantitative changes in the regulatory network can render approximately 500 multicellular phenotypes. This phenotypic capacity is an order-of-magnitude below the theoretical upper limit for this system but yet is large enough to demonstrate that the system is not restricted to a select few outcomes. Using metrics to gauge the robustness of these phenotypes to parameter perturbations, we identify a select subset of novel phenotypes that are the most promising for experimental validation. In addition, our model calculations provide a layout of these phenotypes in network parameter space. Analyzing this landscape of multicellular phenotypes yielded two significant insights. First, we show that experimentally well-established mutant phenotypes may be rendered using non-canonical network perturbations. Second, we show that the predicted multicellular patterns include not only those observed in C. elegans, but also those occurring exclusively in other species of the Caenorhabditis genus. This result demonstrates that quantitative diversification of a common regulatory network is indeed demonstrably sufficient to generate the phenotypic differences observed across three major species within the Caenorhabditis genus. Using our computational framework, we systematically identify the quantitative changes that may have occurred in the regulatory network during the evolution of these species. Our model predictions show that significant phenotypic diversity may be sampled through quantitative variations in the regulatory network

  1. United States Human Access to Space, Exploration of the Moon and Preparation for Mars Exploration

    Rhatigan, Jennifer L.

    2009-01-01

    In the past, men like Leonardo da Vinci and Jules Verne imagined the future and envisioned fantastic inventions such as winged flying machines, submarines, and parachutes, and posited human adventures like transoceanic flight and journeys to the Moon. Today, many of their ideas are reality and form the basis for our modern world. While individual visionaries like da Vinci and Verne are remembered for the accuracy of their predictions, today entire nations are involved in the process of envisioning and defining the future development of mankind, both on and beyond the Earth itself. Recently, Russian, European, and Chinese teams have all announced plans for developing their own next generation human space vehicles. The Chinese have announced their intention to conduct human lunar exploration, and have flown three crewed space missions since 2003, including a flight with three crew members to test their extravehicular (spacewalking) capabilities in September 2008. Very soon, the prestige, economic development, scientific discovery, and strategic security advantage historically associated with leadership in space exploration and exploitation may no longer be the undisputed province of the United States. Much like the sponsors of the seafaring explorers of da Vinci's age, we are motivated by the opportunity to obtain new knowledge and new resources for the growth and development of our own civilization. NASA's new Constellation Program, established in 2005, is tasked with maintaining the United States leadership in space, exploring the Moon, creating a sustained human lunar presence, and eventually extending human operations to Mars and beyond. Through 2008, the Constellation Program developed a full set of detailed program requirements and is now completing the preliminary design phase for the new Orion Crew Exploration Vehicle (CEV), the Ares I Crew Launch Vehicle, and the associated infrastructure necessary for humans to explore the Moon. Component testing is well

  2. On the Capacity Region for Cognitive Multiple Access over White Space Channels

    Zhang, Huazi; Zhang, Zhaoyang

    2012-01-01

    Cognitive Radio (CR) has stirred great interest with its potential to exploit the already scarce spectrum resource. The cognitive multiple access channels (CogMAC) are commonly seen in many applications, such as the Cognitive Radio Sensor Networks (CRSN), and the 802.22 cognitive Wireless Regional Area Networks (WRAN). In this paper, the primary user (PU) activities are treated as on/off side information, which can be obtained causally or non-causally. The cognitive MAC channels are then modeled as multi-switch channels and their rate regions are characterized. Explicit forms of outer and inner bounds of this rate region are derived by assuming additional side information, and they are shown to be tight in some special cases. An optimal rate and power allocation scheme that maximizes the sum rate is also proposed. The numerical results show the importance of side information in enhancing the capacity and the effectiveness of our rate allocation scheme.

  3. Feasibility of ultrasound-guided epidural access at the lumbo-sacral space in dogs.

    Liotta, Annalisa; Busoni, Valeria; Carrozzo, Maria Valentina; Sandersen, Charlotte; Gabriel, Annick; Bolen, Géraldine

    2015-01-01

    Epidural injections are commonly performed blindly in veterinary medicine. The aims of this study were to describe the lumbosacral ultrasonographic anatomy and to assess the feasibility of an ultrasound-guided epidural injection technique in dogs. A cross sectional anatomic atlas of the lumbosacral region and ex vivo ultrasound images were obtained in two cadavers to describe the ultrasound anatomy and to identify the landmarks. Sixteen normal weight canine cadavers were used to establish two variations of the technique for direct ultrasound-guided injection, using spinal needles or epidural catheters. The technique was finally performed in two normal weight cadavers, in two overweight cadavers and in five live dogs with radiographic abnormalities resulting of the lumbosacral spine. Contrast medium was injected and CT was used to assess the success of the injection. The anatomic landmarks to carry out the procedure were the seventh lumbar vertebra, the iliac wings, and the first sacral vertebra. The target for directing the needle was the trapezoid-shaped echogenic zone between the contiguous articular facets of the lumbosacral vertebral canal visualized in a parasagittal plane. The spinal needle or epidural catheter was inserted in a 45° craniodorsal-caudoventral direction through the subcutaneous tissue and the interarcuate ligament until reaching the epidural space. CT examination confirmed the presence of contrast medium in the epidural space in 25/25 dogs, although a variable contamination of the subarachnoid space was also noted. Findings indicated that this ultrasound-guided epidural injection technique is feasible for normal weight and overweight dogs, with and without radiographic abnormalities of the spine. PMID:25187175

  4. REUSABLE PROPULSION ARCHITECTURE FOR SUSTAINABLE LOW-COST ACCESS TO SPACE

    Bonometti, Joseph; Frame, Kyle L.; Dankanich, John W.

    2005-01-01

    Two transportation architecture changes are presented at either end of a conventional two-stage rocket flight: 1) Air launch using a large, conventional, pod hauler design (i.e., Crossbow)ans 2) Momentum exchange tether (i.e., an in-space asset like MXER). Air launch has ana analytically justified cost reduction of approx. 10%, but its intangible benefits suggest real-world operations cost reductions much higher: 1) Inherent launch safety; 2) Mission Risk Reduction; 3) Favorable payload/rocket limitations; and 4) Leveraging the aircraft for other uses (military transport, commercial cargo, public outreach activities, etc.)

  5. Ablation modeling of electro-magnetically launched projectile for access to space

    Gosse, Ryan C.

    It has been proposed to study and identify the technical issues involved in the launch to space of micro-satellite payloads using an airborne electromagnetic launcher (AEML). A computational fluid dynamics (CFD) computer code was developed to help characterize the aerothermal issues involved with the flight of the projectile as it exits the Earth's atmosphere. Conceptual geometries were chosen to evaluate the feasibility of launching to orbit from an aircraft. Due to expected high heating fluxes, carboncarbon material was selected for the thermal protection system (TPS). Results of the conceptual study are presented and used to evaluate the practicality of the AEML concept.

  6. Phase space measurements at non-accessible point on the beam path of an accelerator facility

    The optimization of beam lines for particles extracted from accelerator facilities requires the knowledge of beam parameters. A method for the measurement of phase space and beam intensity distribution is represented. This method depends on the setting of quadrupole lenses that allows the imaging of beam profiles at arbitrary positions along the beam path on the same multi-wire proportional chamber, where the intensity distribution can be evaluated. The necessary focusing powers for a certain imaging task are calculated in a thin lens approximation. The corresponding focusing power for thick quadrupole lenses are calculated using the PC transport program. A comparison of the calculated focusing powers for thin and thick lenses reveals deviations at the highest field strengths, due to saturation effect. The position of the beam waist in normal and angular space is directly calculated and visualized. The horizontal and vertical waist positions are found to be rather independent of the beam energy. Extensive calculation was done to study the effect of a reduced aperture on the maximum beam emittances aax and aay of the extracted particles. The main result shows that the maximum emittance passing through depends on the waist distant and the diameter of the reduced aperture. (orig.)

  7. The DEMETER micro satellite launch campaign: A cheap access to space

    Dubourg, Vincent; Kainov, Vladimir; Thoby, Michel; Silkin, Olexyi; Solovey, Vladislav

    The CNES micro satellite DEMETER has been successfully launched on June 29th 2004 by a DNEPR launcher, from the Baïkonur Cosmodrome. DEMETER was the main payload among eight co-passengers. Initiated by CNES in 1998, DEMETER is the first model of the MYRIADE micro satellites line of products; its objectives are both scientific and technological; the satellite has now been flying for science for almost one year. The space head module of the launcher has been developed by the Ukrainian company Yuzhnoye, and a complete fit check test campaign has been performed in December 2003 to confirm the compatibility of the payloads with their launcher interfaces. The launch campaign took place at Baïkonur Cosmodrome from the end of May to the end of June 2004, implying a close partnership between the CNES satellite team and the Russian and Ukrainian launcher authorities: DEMETER has been a pioneer not only for the concept itself, but also for being the first satellite of this range (three axis stabilized, including an hydrazine propulsion system and developed by a national space agency) to be launched on a former intercontinental ballistic missile SS18. The launch service was managed by ISC Kosmotras, and it was the first sun synchronous orbit launch for DNEPR. The present paper deals with the details of DEMETER satellite and its launch, and preliminary results.

  8. Accessibility of urban green spaces in Hangzhou City%杭州城市休闲绿地可达性分析

    桑丽杰; 舒永钢; 祝炜平; 苏飞

    2013-01-01

    Urban leisure green space is a typical green open space very important for maintenance of urban ecological security and human health.Accessibility to urban leisure green spaces directly affects the quality of services for city dwellers and reflects the region's urbanization level.Accessibility to urban green spaces can be used as an indicator to assess the effectiveness of providing ecological services to residents of the green areas in current system and long-term future system.With socio-economic development,Chinese people and governments are paying much more attention to urban green spaces,and more and more citizens have the desire of contact with nature,and are willing to live close to urban green spaces.Consequently,governments plan to develop and optimize urban green space allocation to meet these demands.In this paper,a quantitative method based on landscape accessibility of green space in Hangzhou City was employed to improve index systems.Aided by GIS technique,this paper conducts analysis on the accessibility and service ability which considers the population densities of every district,applying the methods of buffer zone,minimum distance and travel.The results indicate that:(1) In Hangzhou City,on average it takes 3.8 minutes from a residential area to a urban leisure green space,and 92.11 percent of urban residents have access to a leisure green space within 10 minutes; the residential areas with poor accessibility are the outskirt areas of the city.(2) As to scenic-spot green spaces,their accessible time is 20.33 minutes.Xihu and Xixi are found to be much more accessible than other scenic spots.(3) The accessibility exhibits a structure of annulations centered around Xihu,the farther the distance is away from Xihu,the poorer the accessibility is.The work of this paper will help improve the key index system for assessing urban green spaces in China,and can provide planners and policymakers with important and valuable information for urban green space

  9. System performances of optical space code-division multiple-access-based fiber-optic two-dimensional parallel data link.

    Nakamura, M; Kitayama, K

    1998-05-10

    Optical space code-division multiple access is a scheme to multiplex and link data between two-dimensional processors such as smart pixels and spatial light modulators or arrays of optical sources like vertical-cavity surface-emitting lasers. We examine the multiplexing characteristics of optical space code-division multiple access by using optical orthogonal signature patterns. The probability density function of interference noise in interfering optical orthogonal signature patterns is calculated. The bit-error rate is derived from the result and plotted as a function of receiver threshold, code length, code weight, and number of users. Furthermore, we propose a prethresholding method to suppress the interference noise, and we experimentally verify that the method works effectively in improving system performance. PMID:18273237

  10. The network on the other side of the net: a multietnographic study on the public spaces with paid access to the Internet in Novo Hamburgo

    Luís Marcelo Miranda

    2011-01-01

    This article discusses the interaction and new social habits in public spaces with paid access to the Internet downtown in Novo Hamburgo. For this, raises the multiethnograpy, a method that combines ethnography, photoethnography, and net(with wi-fi), cybercafés, and lan houses are observed, reported and discussed some of the characteristics of those places, which can be viewed as aggregations to cyberspace. Concrete examples are shown from photographs on the places, and urban notes describing...

  11. A closed-cycle dilution refrigerator with free-space and fiber optical access for quantum optomechanics experiments at 25mK

    Groeblacher, Simon; Wieczorek, Witlef; Christ, Peter; Buehler, Matthias; Wernicke, Doreen; Hoehne, Jens; Aspelmeyer, Markus

    2011-03-01

    We report on the operation of a closed-cycle dilution refrigerator for quantum optomechanics experiments at 25mK. The dilution fridge is accessible both via free-space as well as fiber coupling, allowing us to perform a variety of optical experiments at low temperatures. It is designed to vibrationally isolate the experiment allowing for stable operation of a high-finesse optical cavity. This enables us to perform cavity-optomechanics experiments at ultra-low temperatures.

  12. Bridging the Digital Divide between Discrete and Continuous Space-Time Array Data to Enhance Accessibility to and Usability of NASA Earth Sciences Data for the Hydrological Community

    Teng, W. L.; Maidment, D. R.; Vollmer, B.; Peters-Lidard, C. D.; Rui, H.; Strub, R.; Whiteaker, T.; Mocko, D. M.; Kirschbaum, D. B.

    2012-12-01

    A longstanding and significant "Digital Divide" in data representation exists between hydrology and climatology and meteorology. Typically, in hydrology, earth surface features are expressed as discrete spatial objects such as watersheds, river reaches, and point observation sites; and time varying data are contained in time series associated with these spatial objects. Long time histories of data may be associated with a single point or feature in space. In meteorology and climatology, remotely sensed observations and weather and climate model information are expressed as continuous spatial fields, with data sequenced in time from one data file to the next. Hydrology tends to be narrow in space and deep in time, while meteorology and climatology are broad in space and narrow in time. This Divide has been an obstacle, specifically, between the hydrological community, as represented by the Consortium of Universities for the Advancement of Hydrologic Science, Inc. (CUAHSI) and relevant data sets at the NASA Goddard Earth Sciences Data and Information Services Center (GES DISC). CUAHSI has developed the Hydrologic Information System (HIS), which is built on international geospatial standards, with one of its aims to bridge the Divide. The opportunity costs of the Divide are high. It has largely prevented the routine access and use of NASA Earth sciences data by the hydrological and, more generally, geospatial community. This presentation describes a recently-begun NASA ACCESS project that addresses the Digital Divide problem. Progress to date is summarized; technical details are provided in a related presentation (Rui et al., Data Reorganization for Optimal Time Series Data Access, Analysis, and Visualization, IN016). Building on prior prototype efforts with EPA BASINS (Better Assessment Science Integrating point and Nonpoint Sources) and CUAHSI HIS, this project focuses on the following approaches to the problems of data discovery, access, and use: (1) Link HIS and

  13. SPRAY FOAM IN ACCESSIBLE SPACES:BEST PRACTICES AND CASE STUDIES FOR RETROFIT IN MIXED-HUMID CLIMATE

    Christian, Jeffrey E [ORNL; Gant, Kathy [Oak Ridge National Laboratory (ORNL)

    2013-12-01

    Heating and cooling the house is one of the homeowners major expenses. Reducing these costs, saving energy, and creating a healthier, more comfortable indoor environment are good reasons to consider improving the building thermal envelope. Improvements usually consider increasing the amount of insulation, reducing the infiltration of outside air, and controlling moisture in existing buildings. This report describes the use of spray foam materials to insulate, seal, and control moisture. This discussion is limited to treating areas that are accessible. What is accessible, however, can vary depending on the type of renovation. If the building has been gutted or exterior surfaces removed, there are more options. This report will look at areas to consider for spray foam application and discuss the types of spray foams available and their uses. A number of case studies are presented to show the effectiveness of this retrofit in existing houses based on performance data.

  14. Four-Channel, 8 x 8 Bit, Two-Dimensional Parallel Transmission by use of Space-Code-Division Multiple-Access Encoder and Decoder Modules.

    Nakamura, M; Kitayama, K; Igasaki, Y; Kaneda, K

    1998-07-10

    We experimentally demonstrate four-channel multiplexing of 64-bit (8 x 8) two-dimensional (2-D) parallel data links on the basis of optical space-code-division multiple access (CDMA) by using new modules of optical spatial encoders and a decoder with a new high-contrast 9-m-long image fiber with 3 x 10(4) cores. Each 8 x 8 bit plane (64-bit parallel data) is optically encoded with an 8 x 8, 2-D optical orthogonal signature pattern. The encoded bit planes are spatially multiplexed and transmitted through an image fiber. A receiver can recover the intended input bit plane by means of an optical decoding process. This result should encourage the application of optical space-CDMA to future high-throughput 2-D parallel data links connecting massively parallel processors. PMID:18285889

  15. The network on the other side of the net: a multietnographic study on the public spaces with paid access to the Internet in Novo Hamburgo

    Luís Marcelo Miranda

    2011-04-01

    Full Text Available This article discusses the interaction and new social habits in public spaces with paid access to the Internet downtown in Novo Hamburgo. For this, raises the multiethnograpy, a method that combines ethnography, photoethnography, and net(with wi-fi, cybercafés, and lan houses are observed, reported and discussed some of the characteristics of those places, which can be viewed as aggregations to cyberspace. Concrete examples are shown from photographs on the places, and urban notes describing the reality of online and off line spaces that serve as the link between physicaland virtual. They are places where contemporary sociability happen, emerging from new forms of socialization, new lifestyles and new forms of social organization.

  16. Latent phenotypes pervade gene regulatory circuits.

    Payne, Joshua L.; Wagner, Andreas

    2014-01-01

    BACKGROUND Latent phenotypes are non-adaptive byproducts of adaptive phenotypes. They exist in biological systems as different as promiscuous enzymes and genome-scale metabolic reaction networks, and can give rise to evolutionary adaptations and innovations. We know little about their prevalence in the gene expression phenotypes of regulatory circuits, important sources of evolutionary innovations. RESULTS Here, we study a space of more than sixteen million three-gene model regulatory circ...

  17. Latent phenotypes pervade gene regulatory circuits

    Payne, Joshua L.; Wagner, Andreas

    2014-01-01

    Background Latent phenotypes are non-adaptive byproducts of adaptive phenotypes. They exist in biological systems as different as promiscuous enzymes and genome-scale metabolic reaction networks, and can give rise to evolutionary adaptations and innovations. We know little about their prevalence in the gene expression phenotypes of regulatory circuits, important sources of evolutionary innovations. Results Here, we study a space of more than sixteen million three-gene model regulatory circuit...

  18. Programmable Ultra Lightweight System Adaptable Radio (PULSAR) Low Cost Telemetry - Access from Space Advanced Technologies or Down the Middle

    Sims. Herb; Varnavas, Kosta; Eberly, Eric

    2013-01-01

    Software Defined Radio (SDR) technology has been proven in the commercial sector since the early 1990's. Today's rapid advancement in mobile telephone reliability and power management capabilities exemplifies the effectiveness of the SDR technology for the modern communications market. In contrast, presently qualified satellite transponder applications were developed during the early 1960's space program. Programmable Ultra Lightweight System Adaptable Radio (PULSAR, NASA-MSFC SDR) technology revolutionizes satellite transponder technology by increasing data through-put capability by, at least, an order of magnitude. PULSAR leverages existing Marshall Space Flight Center SDR designs and commercially enhanced capabilities to provide a path to a radiation tolerant SDR transponder. These innovations will (1) reduce the cost of NASA Low Earth Orbit (LEO) and Deep Space transponders, (2) decrease power requirements, and (3) a commensurate volume reduction. Also, PULSAR increases flexibility to implement multiple transponder types by utilizing the same hardware with altered logic - no analog hardware change is required - all of which can be accomplished in orbit. This provides high capability, low cost, transponders to programs of all sizes. The final project outcome would be the introduction of a Technology Readiness Level (TRL) 7 low-cost CubeSat to SmallSat telemetry system into the NASA Portfolio.

  19. High Speed, Low Cost Telemetry Access from Space Development Update on Programmable Ultra Lightweight System Adaptable Radio (PULSAR)

    Simms, William Herbert, III; Varnavas, Kosta; Eberly, Eric

    2014-01-01

    Software Defined Radio (SDR) technology has been proven in the commercial sector since the early 1990's. Today's rapid advancement in mobile telephone reliability and power management capabilities exemplifies the effectiveness of the SDR technology for the modern communications market. In contrast, the foundations of transponder technology presently qualified for satellite applications were developed during the early space program of the 1960's. Conventional transponders are built to a specific platform and must be redesigned for every new bus while the SDR is adaptive in nature and can fit numerous applications with no hardware modifications. A SDR uses a minimum amount of analog / Radio Frequency (RF) components to up/down-convert the RF signal to/from a digital format. Once the signal is digitized, all processing is performed using hardware or software logic. Typical SDR digital processes include; filtering, modulation, up/down converting and demodulation. NASA Marshall Space Flight Center (MSFC) Programmable Ultra Lightweight System Adaptable Radio (PULSAR) leverages existing MSFC SDR designs and commercial sector enhanced capabilities to provide a path to a radiation tolerant SDR transponder. These innovations (1) reduce the cost of NASA Low Earth Orbit (LEO) and Deep Space standard transponders, (2) decrease power requirements, and (3) commensurately reduce volume. A second pay-off is the increased SDR flexibility by allowing the same hardware to implement multiple transponder types simply by altering hardware logic - no change of hardware is required - all of which will ultimately be accomplished in orbit. Development of SDR technology for space applications will provide a highly capable, low cost transponder to programs of all sizes. The MSFC PULSAR Project results in a Technology Readiness Level (TRL) 7 low-cost telemetry system available to Smallsat and CubeSat missions, as well as other platforms. This paper documents the continued development and

  20. NASA Affordable Vehicle Avionics (AVA): Common Modular Avionics System for Nano-Launchers Offering Affordable Access to Space

    Cockrell, James

    2015-01-01

    Small satellites are becoming ever more capable of performing valuable missions for both government and commercial customers. However, currently these satellites can only be launched affordably as secondary payloads. This makes it difficult for the small satellite mission to launch when needed, to the desired orbit, and with acceptable risk. NASA Ames Research Center has developed and tested a prototype low-cost avionics package for space launch vehicles that provides complete GNC functionality in a package smaller than a tissue box with a mass less than 0.84 kg. AVA takes advantage of commercially available, low-cost, mass-produced, miniaturized sensors, filtering their more noisy inertial data with realtime GPS data. The goal of the Advanced Vehicle Avionics project is to produce and flight-verify a common suite of avionics and software that deliver affordable, capable GNC and telemetry avionics with application to multiple nano-launch vehicles at 1 the cost of current state-of-the-art avionics.

  1. [Food environment and space accessibility evaluation to perform physical activity in 3 socially contrasting neighbourhoods of Buenos Aires city].

    Garipe, Leila Yasmin; Gónzalez, Verónica; Biasizzo, Antonella; Soriano, Jennifer Laila; Perman, Gaston; Giunta, Diego

    2014-01-01

    Due to the environmental influences on health, the goal of this study was to describe and compare the built environment in 3 socially contrasting neighbourhoods of Buenos Aires city.In 2011 a cross-sectional study was conducted in 3 socially contrasting neighbourhoods of Buenos Aires city: Recoleta (upper class), Almagro (middle class) and Constitución (lower class). Grocery stores and food stands were surveyed as well as all suitable spaces to perform physical activity. An analysis was conducted to assess the density of every food outlet per Km2 of each neighbourhood's area and per 10000 inhabitants. 2778 food stores and 149 outdoor physical activity facilities were surveyed. A higher density was observed in Constitución for fast food restaurants (Recoleta 3.6; Almagro 2.4; Constitución 6.7) and food stands (Recoleta 4.2; Almagro 1.2; Constitución 25.7) and a lower density for outdoor physical activity facilities. Population density and area density proved to be analogous. Statistically relevant differences were observed regarding the dimension of each food outlet: grocery stores, fruit stands, pubs, restaurants and food stands, as well as in the number of food stores and outdoor physical activity facilities. The information gathered in this study could be highly useful for public health policies on healthy lifestyles, and could eventually redefine the built environment in order to improve the city's equality regarding outdoor physical activity facilities and food stores. PMID:25647550

  2. Accessibility and sensory experiences

    Ryhl, Camilla

    2010-01-01

    This article introduces a new design concept; sensory accessibility. While acknowledging the importance of sensory experiences in architectural quality, as well as the importance of accommodating user needs the concept combines three equally important factors; architecture, the senses and...... accessibility. Sensory accessibility accommodates aspects of a sensory disability and describes architectural design requirements needed to ensure access to architectural experiences. In the context of architecture accessibility has become a design concept of its own. It is generally described as ensuring...... physical access to the built environment by accommodating physical disabilities. While the existing concept of accessibility ensures the physical access of everyone to a given space, sensory accessibility ensures the choice of everyone to stay and be able to participate and experience....

  3. Espacios públicos integrados y accesibilidad como objetivo cívico. / Integrated public spaces, and accessibility as civic objective.

    Pavez R.,María Isabel

    1999-12-01

    Full Text Available Una reflexión que considere los conceptos esenciales de la ciudad occidental, sin soslayar las mutaciones de la ciudad de fines del siglo XX, debería plantear una diversificación e integración mayor de los espacios públicos, y la accesibilidad a ellos como un "objetivo cívico". En el marco de una aproximación ecológica a los asentamientos humanos, interesan las maneras según las cuales el ciudadano entra en contacto con sus semejantes y con su entorno en sentido amplio: físico y sensible, pero también social, económico, cultural. Esto supone asumir las modalidades efectivas de la habitación, las que no se reducen a la "casa" o al "apartamento", sino que significan también habitar un vecindario, un barrio, una ciudad, una región, un país, una cultura, una naturaleza. Y, las modalidades efectivas de la sociabilización, las que no se reducen a una pertenencia comunitaria o laboral, sino que incluyen co-presencias y encuentros imprevistos en ese amplio territorio. /A reflection that considers the essential concepts of the western city, without ignoring the mutations of the city of the late twentieth century, should raise a greater diversification and integration of public spaces, and accessibility to them as a "civic purpose".

  4. The Looming Infrastructure Plateau? Space, Funding, Connection Speed, and the Ability of Public Libraries to meet the Demand for Free Internet Access

    McClure, Charles R.; Jaeger, Paul T.; Bertot, John Carlo

    2007-01-01

    While virtually all public libraries provide free Internet access to patrons, libraries seem to be reaching a plateau in their ability to meet demands for Internet access. Based on the findings of Public Libraries and the Internet surveys, the average number of public access workstations and the average connection speeds of Internet access in public libraries have stayed the same or slightly decreased in recent years. Further, more than half of libraries do not have sufficient connection spee...

  5. 2005 annual report of MEXT specially promoted research, 'Development of the 4D Space Access Neutron Spectrometer (4SEASONS) and elucidation of the Mechanism of Oxide High-Tc superconductivity'

    A research project entitled 'Development of the 4D Space Access Neutron Spectrometer (4SEASONS) and Elucidation of the Mechanism of Oxide High-Tc Superconductivity' has started in 2005 (repr. by M. Arai). It is supported by MEXT, Grant-in-Aid for Specially Promoted Research and is going to last until fiscal 2009. The goal of the project is to elucidate the mechanism of oxide high-Tc superconductivity by neutron scattering technique. For this purpose, we will develop an inelastic neutron scattering instrument 4SEASONS (4d SpacE AccesS neutrON Spectrometer) for the spallation neutron source in Japan Proton Accelerator Research Complex (J-PARC). The instrument will have 100 times higher performance than existing world-class instruments, and will enable detailed observation of anomalous magnetic excitations and phonons in a four-dimensional momentum-energy space. This report summarizes the progress in the research project in fiscal 2005. (author)

  6. Enhancing Scientific Collaboration, Transparency, and Public Access: Utilizing the Second Life Platform to Convene a Scientific Conference in 3-D Virtual Space

    McGee, B. W.

    2006-12-01

    Recent studies reveal a general mistrust of science as well as a distorted perception of the scientific method by the public at-large. Concurrently, the number of science undergraduate and graduate students is in decline. By taking advantage of emergent technologies not only for direct public outreach but also to enhance public accessibility to the science process, it may be possible to both begin a reversal of popular scientific misconceptions and to engage a new generation of scientists. The Second Life platform is a 3-D virtual world produced and operated by Linden Research, Inc., a privately owned company instituted to develop new forms of immersive entertainment. Free and downloadable to the public, Second Life offers an imbedded physics engine, streaming audio and video capability, and unlike other "multiplayer" software, the objects and inhabitants of Second Life are entirely designed and created by its users, providing an open-ended experience without the structure of a traditional video game. Already, educational institutions, virtual museums, and real-world businesses are utilizing Second Life for teleconferencing, pre-visualization, and distance education, as well as to conduct traditional business. However, the untapped potential of Second Life lies in its versatility, where the limitations of traditional scientific meeting venues do not exist, and attendees need not be restricted by prohibitive travel costs. It will be shown that the Second Life system enables scientific authors and presenters at a "virtual conference" to display figures and images at full resolution, employ audio-visual content typically not available to conference organizers, and to perform demonstrations or premier three-dimensional renderings of objects, processes, or information. An enhanced presentation like those possible with Second Life would be more engaging to non- scientists, and such an event would be accessible to the general users of Second Life, who could have an

  7. Phenotypic profiles of Armenian grape cultivars

    Aroutiounian Rouben

    2015-01-01

    Full Text Available The conservation and sustainable use of grapevine biodiversity in Armenia is particularly important due to the large number of traditional local varieties. Being partially different from European grapevine gene pool, the material of Armenian local cultivars significantly contributes to the understanding of the genetic variation and is valuable source for target selection. During last years many Armenian grapevine cultivars have been already described and their genotypes determined, but some local varieties and wild accessions remain unidentified and their phenotypic characteristics overlooked. The comprehensive analysis of phenotypes is essential for research, including genetic association studies, cultivar evaluation and selection. The goal of our research was the phenotyping on the base of reproductive, carpological and analytical characteristics of 80 Armenian aboriginal and new grape cultivars. Description of phenotypic profiles is important step towards identification and conservation of genetic resources of Armenian grapes. In future, these data can be applied for breeding of improved grape varieties targeted to fresh consumption and wine production.

  8. A Review of Imaging Techniques for Plant Phenotyping

    Lei Li; Qin Zhang; Danfeng Huang

    2014-01-01

    Given the rapid development of plant genomic technologies, a lack of access to plant phenotyping capabilities limits our ability to dissect the genetics of quantitative traits. Effective, high-throughput phenotyping platforms have recently been developed to solve this problem. In high-throughput phenotyping platforms, a variety of imaging methodologies are being used to collect data for quantitative studies of complex traits related to the growth, yield and adaptation to biotic or abiotic st...

  9. Phenotyping and beyond: modelling the relationships between traits

    Granier, Christine; Vile, Denis

    2014-01-01

    Plant phenotyping technology has become more advanced with the capacity to measure many morphological and physiological traits on a given individual. With increasing automation, getting access to various traits on a high number of genotypes over time raises the need to develop systems for data storage and analyses, all congregating into plant phenotyping pipelines. In this review, we highlight several studies that illustrate the latest advances in plant multi-trait phenotyping and discuss fut...

  10. Performance of asynchronous fiber-optic code division multiple access system based on three-dimensional wavelength/time/space codes and its link analysis.

    Singh, Jaswinder

    2010-03-10

    A novel family of three-dimensional (3-D) wavelength/time/space codes for asynchronous optical code-division-multiple-access (CDMA) systems with "zero" off-peak autocorrelation and "unity" cross correlation is reported. Antipodal signaling and differential detection is employed in the system. A maximum of [(W x T+1) x W] codes are generated for unity cross correlation, where W and T are the number of wavelengths and time chips used in the code and are prime. The conditions for violation of the cross-correlation constraint are discussed. The expressions for number of generated codes are determined for various code dimensions. It is found that the maximum number of codes are generated for S codes is compared to the earlier reported two-dimensional (2-D)/3-D codes for asynchronous systems. The codes have a code-set-size to code-size ratio greater than W/S. For instance, with a code size of 2065 (59 x 7 x 5), a total of 12,213 users can be supported, and 130 simultaneous users at a bit-error rate (BER) of 10(-9). An arrayed-waveguide-grating-based reconfigurable encoder/decoder design for 2-D implementation for the 3-D codes is presented so that the need for multiple star couplers and fiber ribbons is eliminated. The hardware requirements of the coders used for various modulation/detection schemes are given. The effect of insertion loss in the coders is shown to be significantly reduced with loss compensation by using an amplifier after encoding. An optical CDMA system for four users is simulated and the results presented show the improvement in performance with the use of loss compensation. PMID:20220892

  11. Temporal abstraction-based clinical phenotyping with Eureka!

    Post, Andrew R; Kurc, Tahsin; Willard, Richie; Rathod, Himanshu; Mansour, Michel; Pai, Akshatha Kalsanka; Torian, William M; Agravat, Sanjay; Sturm, Suzanne; Saltz, Joel H

    2013-01-01

    Temporal abstraction, a method for specifying and detecting temporal patterns in clinical databases, is very expressive and performs well, but it is difficult for clinical investigators and data analysts to understand. Such patterns are critical in phenotyping patients using their medical records in research and quality improvement. We have previously developed the Analytic Information Warehouse (AIW), which computes such phenotypes using temporal abstraction but requires software engineers to use. We have extended the AIW's web user interface, Eureka! Clinical Analytics, to support specifying phenotypes using an alternative model that we developed with clinical stakeholders. The software converts phenotypes from this model to that of temporal abstraction prior to data processing. The model can represent all phenotypes in a quality improvement project and a growing set of phenotypes in a multi-site research study. Phenotyping that is accessible to investigators and IT personnel may enable its broader adoption. PMID:24551400

  12. ¿Es posible caracterizar el espacio fenotípico a partir de las relaciones entre elementos de un plan corporal? Un análisis sistémico en la lagartija Uta stansburiana Is it possible to characterize the phenotypic space from the relationship among the elements of a body plan? A systemic analysis in the lizard Uta stansburiana

    Juan Rivera

    2009-12-01

    Full Text Available Se analizaron las relaciones cuantitativas entre los elementos del plan corporal de Uta stansburiana para evaluar su influencia sobre la estructura y los límites del espacio fenotípico de esta especie. Se desarrolló una metodología basada en la concepción de los organismos como sistema; las relaciones entre los elementos del plan corporal se describen mediante un sistema de ecuaciones simultáneas (SES, del tipo x i = mx j + b, en donde x i y x j son variables morfométricas y m y b son constantes. Este sistema se utilizó para simular la variación fenotípica de U. stansburiana y para caracterizar su espacio fenotípico. Los resultados indican que la estructura y los límites del espacio fenotípico de un taxón son propiedades emergentes del sistema que constituye el plan corporal, tales propiedades pueden considerarse como restricciones internas, las cuales actúan conjuntamente con la selección natural generando espacios fenotípicos discontinuos. La importancia del presente estudio radica en ofrecer una opción para definir y analizar el espacio fenotípico de un taxón desde una perspectiva sistémica, lo cual puede ser útil para plantear y probar hipótesis relacionadas con los factores causales de dicho espacio.Quantitative relationships among the elements of the body plan of Uta stansburiana were analyzed to evaluate their influence on the structure and limits of its phenotypic space. A methodology based on conceiving organisms as systems was developed. The relations among the elements of the body plan are described by a system of simultaneous equations (SES of the type x i= mx j + b, where x i and x j are morphometric variables, and m and b are constants. This system was employed to simulate the phenotypic variation of U. stansburiana and to characterize its phenotypic space. The results indicate that the structure and limits of the phenotypic space of a taxon are emergent properties of the system that constitutes the body plan

  13. Space space space

    Trembach, Vera

    2014-01-01

    Space is an introduction to the mysteries of the Universe. Included are Task Cards for independent learning, Journal Word Cards for creative writing, and Hands-On Activities for reinforcing skills in Math and Language Arts. Space is a perfect introduction to further research of the Solar System.

  14. Coded Random Access

    Paolini, Enrico; Stefanovic, Cedomir; Liva, Gianluigi;

    2015-01-01

    The rise of machine-to-machine communications has rekindled the interest in random access protocols as a support for a massive number of uncoordinatedly transmitting devices. The legacy ALOHA approach is developed under a collision model, where slots containing collided packets are considered as...... waste. However, if the common receiver (e.g., base station) is capable to store the collision slots and use them in a transmission recovery process based on successive interference cancellation, the design space for access protocols is radically expanded. We present the paradigm of coded random access......, in which the structure of the access protocol can be mapped to a structure of an erasure-correcting code defined on graph. This opens the possibility to use coding theory and tools for designing efficient random access protocols, offering markedly better performance than ALOHA. Several instances of...

  15. Does access to neighbourhood green space promote a healthy duration of sleep? Novel findings from a cross-sectional study of 259 319 Australians

    Astell-Burt, Thomas; Feng, Xiaoqi; Kolt, Gregory S

    2013-01-01

    Objectives: Experiments demonstrate that exposure to parks and other 'green spaces' promote favourable psychological and physiological outcomes. As a consequence, people who reside in greener neighbourhoods may also have a lower risk of short sleep duration (

  16. The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data

    Köhler, Sebastian; Doelken, Sandra C.; Mungall, Christopher J.; Bauer, Sebastian; Firth, Helen V.; Bailleul-Forestier, Isabelle; Black, Graeme C. M.; Brown, Danielle L.; Brudno, Michael; Campbell, Jennifer; FitzPatrick, David R.; Eppig, Janan T.; Jackson, Andrew P.; Freson, Kathleen; Girdea, Marta; Helbig, Ingo; Hurst, Jane A.; Jähn, Johanna; Jackson, Laird G.; Kelly, Anne M.; Ledbetter, David H.; Mansour, Sahar; Martin, Christa L.; Moss, Celia; Mumford, Andrew; Ouwehand, Willem H.; Park, Soo-Mi; Riggs, Erin Rooney; Scott, Richard H.; Sisodiya, Sanjay; Vooren, Steven Van; Wapner, Ronald J.; Wilkie, Andrew O. M.; Wright, Caroline F.; Vulto-van Silfhout, Anneke T.; de Leeuw, Nicole; de Vries, Bert B. A.; Washingthon, Nicole L.; Smith, Cynthia L.; Westerfield, Monte; Schofield, Paul; Ruef, Barbara J.; Gkoutos, Georgios V.; Haendel, Melissa; Smedley, Damian; Lewis, Suzanna E.; Robinson, Peter N.

    2014-01-01

    The Human Phenotype Ontology (HPO) project, available at http://www.human-phenotype-ontology.org, provides a structured, comprehensive and well-defined set of 10,088 classes (terms) describing human phenotypic abnormalities and 13,326 subclass relations between the HPO classes. In addition we have developed logical definitions for 46% of all HPO classes using terms from ontologies for anatomy, cell types, function, embryology, pathology and other domains. This allows interoperability with several resources, especially those containing phenotype information on model organisms such as mouse and zebrafish. Here we describe the updated HPO database, which provides annotations of 7,278 human hereditary syndromes listed in OMIM, Orphanet and DECIPHER to classes of the HPO. Various meta-attributes such as frequency, references and negations are associated with each annotation. Several large-scale projects worldwide utilize the HPO for describing phenotype information in their datasets. We have therefore generated equivalence mappings to other phenotype vocabularies such as LDDB, Orphanet, MedDRA, UMLS and phenoDB, allowing integration of existing datasets and interoperability with multiple biomedical resources. We have created various ways to access the HPO database content using flat files, a MySQL database, and Web-based tools. All data and documentation on the HPO project can be found online. PMID:24217912

  17. A Review of Imaging Techniques for Plant Phenotyping

    Lei Li

    2014-10-01

    Full Text Available Given the rapid development of plant genomic technologies, a lack of access to plant phenotyping capabilities limits our ability to dissect the genetics of quantitative traits. Effective, high-throughput phenotyping platforms have recently been developed to solve this problem. In high-throughput phenotyping platforms, a variety of imaging methodologies are being used to collect data for quantitative studies of complex traits related to the growth, yield and adaptation to biotic or abiotic stress (disease, insects, drought and salinity. These imaging techniques include visible imaging (machine vision, imaging spectroscopy (multispectral and hyperspectral remote sensing, thermal infrared imaging, fluorescence imaging, 3D imaging and tomographic imaging (MRT, PET and CT. This paper presents a brief review on these imaging techniques and their applications in plant phenotyping. The features used to apply these imaging techniques to plant phenotyping are described and discussed in this review.

  18. A review of imaging techniques for plant phenotyping.

    Li, Lei; Zhang, Qin; Huang, Danfeng

    2014-01-01

    Given the rapid development of plant genomic technologies, a lack of access to plant phenotyping capabilities limits our ability to dissect the genetics of quantitative traits. Effective, high-throughput phenotyping platforms have recently been developed to solve this problem. In high-throughput phenotyping platforms, a variety of imaging methodologies are being used to collect data for quantitative studies of complex traits related to the growth, yield and adaptation to biotic or abiotic stress (disease, insects, drought and salinity). These imaging techniques include visible imaging (machine vision), imaging spectroscopy (multispectral and hyperspectral remote sensing), thermal infrared imaging, fluorescence imaging, 3D imaging and tomographic imaging (MRT, PET and CT). This paper presents a brief review on these imaging techniques and their applications in plant phenotyping. The features used to apply these imaging techniques to plant phenotyping are described and discussed in this review. PMID:25347588

  19. NASA Space Sounds API

    National Aeronautics and Space Administration — NASA has released a series of space sounds via sound cloud. We have abstracted away some of the hassle in accessing these sounds, so that developers can play with...

  20. Mixed phenotype acute leukemia

    Ye Zixing; Wang Shujie

    2014-01-01

    Objective To highlight the current understanding of mixed phenotype acute leukemia (MPAL).Data sources We collected the relevant articles in PubMed (from 1985 to present),using the terms "mixed phenotype acute leukemia","hybrid acute leukemia","biphenotypic acute leukemia",and "mixed lineage leukemia".We also collected the relevant studies in WanFang Data base (from 2000 to present),using the terms "mixed phenotype acute leukemia" and "hybrid acute leukemia".Study selection We included all relevant studies concerning mixed phenotype acute leukemia in English and Chinese version,with no limitation of research design.The duplicated articles are excluded.Results MPAL is a rare subgroup of acute leukemia which expresses the myeloid and lymphoid markers simultaneously.The clinical manifestations of MPAL are similar to other acute leukemias.The World Health Organization classification and the European Group for Immunological classification of Leukaemias 1998 cdteria are most widely used.MPAL does not have a standard therapy regimen.Its treatment depends mostly on the patient's unique immunophenotypic and cytogenetic features,and also the experience of individual physician.The lack of effective treatment contributes to an undesirable prognosis.Conclusion Our understanding about MPAL is still limited.The diagnostic criteria have not been unified.The treatment of MPAL remains to be investigated.The prognostic factor is largely unclear yet.A better diagnostic cdteria and targeted therapeutics will improve the therapy effect and a subsequently better prognosis.

  1. Phenotypic Resistance to Antibiotics

    Jose L. Martinez

    2013-04-01

    Full Text Available The development of antibiotic resistance is usually associated with genetic changes, either to the acquisition of resistance genes, or to mutations in elements relevant for the activity of the antibiotic. However, in some situations resistance can be achieved without any genetic alteration; this is called phenotypic resistance. Non-inherited resistance is associated to specific processes such as growth in biofilms, a stationary growth phase or persistence. These situations might occur during infection but they are not usually considered in classical susceptibility tests at the clinical microbiology laboratories. Recent work has also shown that the susceptibility to antibiotics is highly dependent on the bacterial metabolism and that global metabolic regulators can modulate this phenotype. This modulation includes situations in which bacteria can be more resistant or more susceptible to antibiotics. Understanding these processes will thus help in establishing novel therapeutic approaches based on the actual susceptibility shown by bacteria during infection, which might differ from that determined in the laboratory. In this review, we discuss different examples of phenotypic resistance and the mechanisms that regulate the crosstalk between bacterial metabolism and the susceptibility to antibiotics. Finally, information on strategies currently under development for diminishing the phenotypic resistance to antibiotics of bacterial pathogens is presented.

  2. Open access

    Dorch, Bertil Fabricius; Demaio, Alessandro; Hersch, Fred

    2012-01-01

    This week, we celebrate open access week – an event aimed at bringing attention to this rapidly emerging form of scientific publication and its ethical imperatives. Traditionally, knowledge breakthroughs and scientific discoveries are shared through publication in academic journals. Peer...... ideas, break down barriers to science and make knowledge accessible to the masses – but this is not actually the case....

  3. Open Access

    Suber, Peter

    2012-01-01

    The Internet lets us share perfect copies of our work with a worldwide audience at virtually no cost. We take advantage of this revolutionary opportunity when we make our work "open access": digital, online, free of charge, and free of most copyright and licensing restrictions. Open access is made possible by the Internet and copyright-holder…

  4. Belém’s built form and its developments to the formation of a system of open spaces accessible to population

    Ana Claudia Duarte Cardoso

    2016-07-01

    Full Text Available This paper presents a characterization of the built space of Belém highlighting, its estuarine condition, physical geography and its economic, social and spacial development. It is based on Quapá-SEL Workshop conclusions held in Belém, in May 2015, in which teachers and students from São Paulo and Pará Federal Universities assessed the conditions of urban open spaces of the city. The results highlight a disarticulation between real estate agents strategies and of urban management towards structuring an Open Spaces System (SEL in Portuguese, as well as its limited appropriation by the population. There is a remarkable differentiation between the landscapes of central area in opposition / contraposition to that at the city’s expansion area. This debate showed how much permanent preservation areas on the banks of inland rivers and islands (the main green spaces of the city and main linkage with the Amazonian biome, with its landscape potentials, have been unevenly appropriated in the city, through gentrification.

  5. The project of documentary space 'ExploRe' Opened pluri-disciplinary exploration of reversibility: multiple-point of view access to exploratory works of Andra on reversibility

    The authors present a digital space (a web site - 'ExploRe') which would allows a community to share a set of pluri-disciplinary information items concerning reversibility, and in which the community members describe the items by using attributes and themes belonging to different points of view

  6. Evaluación comparativa de la accesibilidad de los espacios web de las bibliotecas universitarias españolas y norteamericanas Comparative accessibility assessment of Web spaces in Spanish and American university libraries

    Laura Caballero-Cortés

    2009-04-01

    Full Text Available El objetivo principal de la presente investigación es analizar y comparar el grado de cumplimiento de determinadas pautas de accesibilidad web en dos grupos de espacios web que pertenecen a una misma tipología conceptual: "Bibliotecas Universitarias", pero que forman parte de dos realidades geográficas, sociales y económicas diferentes: España y Norteamérica. La interpretación de los resultados pone de manifiesto que es posible utilizar técnicas webmétricas basadas en las características de accesibilidad web para contrastar dos conjuntos de espacios web cerrados.The main objective of this research is to analyze and compare the degree in which certain Accessibility Guidelines comply with two groups of web spaces which belong to the same conceptual typology: "University Libraries", but conform two different geographic, social and economical realities -Spain and the United States. Interpretation of results reveals the possibility of using web metrics techniques based on Web accessibility characteristics in order to contrast two categories of closed web spaces.

  7. Selective access and editing in a database

    Maluf, David A. (Inventor); Gawdiak, Yuri O. (Inventor)

    2010-01-01

    Method and system for providing selective access to different portions of a database by different subgroups of database users. Where N users are involved, up to 2.sup.N-1 distinguishable access subgroups in a group space can be formed, where no two access subgroups have the same members. Two or more members of a given access subgroup can edit, substantially simultaneously, a document accessible to each member.

  8. Phenotypic Switching in Fungi

    Jain, Neena; Hasan, Fahmi; Fries, Bettina C.

    2008-01-01

    Over the past three decades new fungal diseases have emerged that now constitute a major threat, especially for patients with chronic diseases and/or underlying immune defi ciencies. Despite the epidemiologic data, the emergence of stable drug-resistant or hyper-virulent fungal strains in human disease has not been demonstrated as seen in emerging viral and bacterial infections. Fungi are eukaryotic microbes that capitalize on a sophisticated built-in ability to generate phenotypic variabilit...

  9. 基于抽象和搜索空间划分的安全性判定方法%Security Analysis of Access Control Policy Based on Predicate Abstract and Verification Space Division

    王昌达; 华明辉; 周从华; 宋香梅; 鞠时光

    2011-01-01

    In order to implement security analysis of access control policy rapidly, predicate abstract with verification space division was presented, I. E. Transfer pristine state machine model analysis to abstract state machine model which contains fewer states. Furthermore, verification space division was introduced to decrease the dimensions of model checking. Endorsed by both theoretic analysis and experiment,time and space requirement are effectively reduced. Compared with the known methods,our methodology is more efficiency and less human interacted.%为满足访问控制策略安全性快速判定的要求,提出一种基于谓词抽象和验证空间划分的访问控制策略状态空间约减方法,将在访问控制策略原始状态机模型上的安全性分析工作转移到包含较少状态的抽象模型上,并进一步划分抽象模型的验证空间,以提高效率.理论分析和实验数据均表明,其安全性分析所需的时间和空间都得到有效约减.与传统方法相比,它具有速度更快、自动化程度更高等优点.

  10. Accessible Knowledge - Knowledge on Accessibility

    Kirkeby, Inge Mette

    2015-01-01

    Although serious efforts are made internationally and nationally, it is a slow process to make our physical environment accessible. In the actual design process, architects play a major role. But what kinds of knowledge, including research-based knowledge, do practicing architects make use of when...... designing accessible environments? The answer to the question is crucially important since it affects how knowledge is distributed and how accessibility can be ensured. In order to get first-hand knowledge about the design process and the sources from which they gain knowledge, 11 qualitative interviews...... were conducted with architects with experience of designing for accessibility. The analysis draws on two theoretical distinctions. The first is research-based knowledge versus knowledge used by architects. The second is context-independent knowledge versus context-dependent knowledge. The practitioners...

  11. 46 CFR 108.205 - Wash spaces; toilet spaces; and shower spaces.

    2010-10-01

    ... 46 Shipping 4 2010-10-01 2010-10-01 false Wash spaces; toilet spaces; and shower spaces. 108.205... DRILLING UNITS DESIGN AND EQUIPMENT Construction and Arrangement Accommodation Spaces § 108.205 Wash spaces... toilet, washing, or shower space that is accessible only from one single or double occupancy...

  12. Open access

    Suber, Peter

    2012-01-01

    The Internet lets us share perfect copies of our work with a worldwide audience at virtually no cost. We take advantage of this revolutionary opportunity when we make our work "open access": digital, online, free of charge, and free of most copyright and licensing restrictions. Open access is made possible by the Internet and copyright-holder consent, and many authors, musicians, filmmakers, and other creators who depend on royalties are understandably unwilling to give their consent. But for 350 years, scholars have written peer-reviewed journal articles for impact, not for money, and are free to consent to open access without losing revenue. In this concise introduction, Peter Suber tells us what open access is and isn't, how it benefits authors and readers of research, how we pay for it, how it avoids copyright problems, how it has moved from the periphery to the mainstream, and what its future may hold. Distilling a decade of Suber's influential writing and thinking about open access, this is the indispe...

  13. Internet Access to Spacecraft

    Rash, James; Parise, Ron; Hogie, Keith; Criscuolo, Ed; Langston, Jim; Jackson, Chris; Price, Harold

    2000-01-01

    The Operating Missions as Nodes on the Internet (OMNI) project at NASA's Goddard Space flight Center (GSFC), is demonstrating the use of standard Internet protocols for spacecraft communication systems. This year, demonstrations of Internet access to a flying spacecraft have been performed with the UoSAT-12 spacecraft owned and operated by Surrey Satellite Technology Ltd. (SSTL). Previously, demonstrations were performed using a ground satellite simulator and NASA's Tracking and Data Relay Sa...

  14. COPD: Definition and Phenotypes

    Vestbo, J.

    2014-01-01

    Chronic obstructive pulmonary disease (COPD) is currently defined as a common preventable and treatable disease that is characterized by persistent airflow limitation that is usually progressive and associated with an enhanced chronic inflammatory response in the airways and the lung to noxious...... particles or gases. Exacerbations and comorbidities contribute to the overall severity in individual patients. The evolution of this definition and the diagnostic criteria currently in use are discussed. COPD is increasingly divided in subgroups or phenotypes based on specific features and association with...

  15. Access French

    Grosz, Bernard

    2014-01-01

    Access is the major new language series designed with the needs of today's generation of students firmly in mind. Whether learning for leisure or business purposes or working towards a curriculum qualification, Access French is specially designed for adults of all ages and gives students a thorough grounding in all the skills required to understand, speak, read and write contemporary French from scratch. The coursebook consists of 10 units covering different topic areas, each of which includes Language Focus panels explaining the structures covered and a comprehensive glossary. Learning tips

  16. 14 CFR 25.611 - Accessibility provisions.

    2010-01-01

    ... 14 Aeronautics and Space 1 2010-01-01 2010-01-01 false Accessibility provisions. 25.611 Section 25... AIRWORTHINESS STANDARDS: TRANSPORT CATEGORY AIRPLANES Design and Construction General § 25.611 Accessibility... required by § 25.1529. (b) EWIS must meet the accessibility requirements of § 25.1719....

  17. 14 CFR 23.611 - Accessibility provisions.

    2010-01-01

    ... 14 Aeronautics and Space 1 2010-01-01 2010-01-01 false Accessibility provisions. 23.611 Section 23.611 Aeronautics and Space FEDERAL AVIATION ADMINISTRATION, DEPARTMENT OF TRANSPORTATION AIRCRAFT... § 23.611 Accessibility provisions. For each part that requires maintenance, inspection, or...

  18. Gene networks underlying convergent and pleiotropic phenotypes in a large and systematically-phenotyped cohort with heterogeneous developmental disorders.

    Tallulah Andrews

    2015-03-01

    Full Text Available Readily-accessible and standardised capture of genotypic variation has revolutionised our understanding of the genetic contribution to disease. Unfortunately, the corresponding systematic capture of patient phenotypic variation needed to fully interpret the impact of genetic variation has lagged far behind. Exploiting deep and systematic phenotyping of a cohort of 197 patients presenting with heterogeneous developmental disorders and whose genomes harbour de novo CNVs, we systematically applied a range of commonly-used functional genomics approaches to identify the underlying molecular perturbations and their phenotypic impact. Grouping patients into 408 non-exclusive patient-phenotype groups, we identified a functional association amongst the genes disrupted in 209 (51% groups. We find evidence for a significant number of molecular interactions amongst the association-contributing genes, including a single highly-interconnected network disrupted in 20% of patients with intellectual disability, and show using microcephaly how these molecular networks can be used as baits to identify additional members whose genes are variant in other patients with the same phenotype. Exploiting the systematic phenotyping of this cohort, we observe phenotypic concordance amongst patients whose variant genes contribute to the same functional association but note that (i this relationship shows significant variation across the different approaches used to infer a commonly perturbed molecular pathway, and (ii that the phenotypic similarities detected amongst patients who share the same inferred pathway perturbation result from these patients sharing many distinct phenotypes, rather than sharing a more specific phenotype, inferring that these pathways are best characterized by their pleiotropic effects.

  19. Enhancing a Self-Access Website

    Troy Rubesch

    2010-01-01

    Since July of 2009, the Self-Access Learning Center (SALC) at Kanda University has maintained a student-oriented Let’s Study English website (accessible at http://elisalc.org). The website acts as an extension of the physical space of the SALC, supporting the Center’s commitment to student access to information and materials which suit individual students’ learning needs, abilities and preferences. It also widens the learning environment- enabling students to access SALC information and resou...

  20. Personalizing Access to Learning Networks

    Dolog, Peter; Simon, Bernd; Nejdl, Wolfgang; Klobucar, Tomaz

    2008-01-01

    In this article, we describe a Smart Space for Learning™ (SS4L) framework and infrastructure that enables personalized access to distributed heterogeneous knowledge repositories. Helping a learner to choose an appropriate learning resource or activity is a key problem which we address in this framework, enabling personalized access to federated learning repositories with a vast number of learning offers. Our infrastructure includes personalization strategies both at the query and the query re...

  1. Pseudomonas Aeruginosa Resistance Phenotypes and Phenotypic Highlighting Methods

    BĂLĂŞOIU, MARIA; BĂLĂŞOIU, A.T.; MĂNESCU, RODICA; AVRAMESCU, CARMEN; IONETE, OANA

    2014-01-01

    Pseudomonas aeruginosa genus bacteria are well known for their increased drug resistance (phenotypic ang genotypic resistance). The most important resistance mechanisms are: enzyme production, reduction of pore expression, reduction of the external membrane proteins expression, efflux systems, topoisomerase mutations. These mechanisms often accumulate and lead to multidrug ressitance strains emergence. The most frequent acquired resistance mechanisms are betalactamase-type enzyme production (ESBLs, AmpC, carbapenemases), which determine variable phenotypes of betalactamines resistance, phenotypes which are associated with aminoglycosides and quinolones resistance. The nonenzymatic drug resistance mechanisms are caused by efflux systems, pore reduction and penicillin-binding proteins (PBP) modification, which are often associated to other resistance mechanisms. Phenotypic methods used for testing these mechanisms are based on highlighting these phenotypes using Kirby Bauer antibiogram, clinical breakpoints, and “cut off” values recommended by EUCAST 2013 standard, version 3.1. PMID:25729587

  2. A multifaceted analysis of HIV-1 protease multidrug resistance phenotypes

    Doherty Kathleen M

    2011-12-01

    Full Text Available Abstract Background Great strides have been made in the effective treatment of HIV-1 with the development of second-generation protease inhibitors (PIs that are effective against historically multi-PI-resistant HIV-1 variants. Nevertheless, mutation patterns that confer decreasing susceptibility to available PIs continue to arise within the population. Understanding the phenotypic and genotypic patterns responsible for multi-PI resistance is necessary for developing PIs that are active against clinically-relevant PI-resistant HIV-1 variants. Results In this work, we use globally optimal integer programming-based clustering techniques to elucidate multi-PI phenotypic resistance patterns using a data set of 398 HIV-1 protease sequences that have each been phenotyped for susceptibility toward the nine clinically-approved HIV-1 PIs. We validate the information content of the clusters by evaluating their ability to predict the level of decreased susceptibility to each of the available PIs using a cross validation procedure. We demonstrate the finding that as a result of phenotypic cross resistance, the considered clinical HIV-1 protease isolates are confined to ~6% or less of the clinically-relevant phenotypic space. Clustering and feature selection methods are used to find representative sequences and mutations for major resistance phenotypes to elucidate their genotypic signatures. We show that phenotypic similarity does not imply genotypic similarity, that different PI-resistance mutation patterns can give rise to HIV-1 isolates with similar phenotypic profiles. Conclusion Rather than characterizing HIV-1 susceptibility toward each PI individually, our study offers a unique perspective on the phenomenon of PI class resistance by uncovering major multidrug-resistant phenotypic patterns and their often diverse genotypic determinants, providing a methodology that can be applied to understand clinically-relevant phenotypic patterns to aid in the

  3. Sex hormone binding globulin phenotypes

    Cornelisse, M M; Bennett, Patrick; Christiansen, M;

    1994-01-01

    Human sex hormone binding globulin (SHBG) is encoded by a normal and a variant allele. The resulting SHBG phenotypes (the homozygous normal SHBG, the heterozygous SHBG and the homozygous variant SHBG phenotype) can be distinguished by their electrophoretic patterns. We developed a novel detection...

  4. Emerging molecular phenotypes of asthma.

    Ray, Anuradha; Oriss, Timothy B; Wenzel, Sally E

    2015-01-15

    Although asthma has long been considered a heterogeneous disease, attempts to define subgroups of asthma have been limited. In recent years, both clinical and statistical approaches have been utilized to better merge clinical characteristics, biology, and genetics. These combined characteristics have been used to define phenotypes of asthma, the observable characteristics of a patient determined by the interaction of genes and environment. Identification of consistent clinical phenotypes has now been reported across studies. Now the addition of various 'omics and identification of specific molecular pathways have moved the concept of clinical phenotypes toward the concept of molecular phenotypes. The importance of these molecular phenotypes is being confirmed through the integration of molecularly targeted biological therapies. Thus the global term asthma is poised to become obsolete, being replaced by terms that more specifically identify the pathology associated with the disease. PMID:25326577

  5. Plant Phenotype Characterization System

    Daniel W McDonald; Ronald B Michaels

    2005-09-09

    This report is the final scientific report for the DOE Inventions and Innovations Project: Plant Phenotype Characterization System, DE-FG36-04GO14334. The period of performance was September 30, 2004 through July 15, 2005. The project objective is to demonstrate the viability of a new scientific instrument concept for the study of plant root systems. The root systems of plants are thought to be important in plant yield and thus important to DOE goals in renewable energy sources. The scientific study and understanding of plant root systems is hampered by the difficulty in observing root activity and the inadequacy of existing root study instrumentation options. We have demonstrated a high throughput, non-invasive, high resolution technique for visualizing plant root systems in-situ. Our approach is based upon low-energy x-ray radiography and the use of containers and substrates (artificial soil) which are virtually transparent to x-rays. The system allows us to germinate and grow plant specimens in our containers and substrates and to generate x-ray images of the developing root system over time. The same plant can be imaged at different times in its development. The system can be used for root studies in plant physiology, plant morphology, plant breeding, plant functional genomics and plant genotype screening.

  6. Tsirelson's space

    Casazza, Peter G

    1989-01-01

    This monograph provides a structure theory for the increasingly important Banach space discovered by B.S. Tsirelson. The basic construction should be accessible to graduate students of functional analysis with a knowledge of the theory of Schauder bases, while topics of a more advanced nature are presented for the specialist. Bounded linear operators are studied through the use of finite-dimensional decompositions, and complemented subspaces are studied at length. A myriad of variant constructions are presented and explored, while open questions are broached in almost every chapter. Two appendices are attached: one dealing with a computer program which computes norms of finitely-supported vectors, while the other surveys recent work on weak Hilbert spaces (where a Tsirelson-type space provides an example).

  7. When Is Open Access Not Open Access?

    MacCallum, Catriona J.

    2007-01-01

    As open access grows in prominence, so too has confusion about what open access means; such confusion arises from a genuine misunderstanding of open access by funders, authors, editors, and publishers alike.

  8. Phenotypic plasticity, costs of phenotypes, and costs of plasticity

    Callahan, Hilary S; Maughan, Heather; Steiner, Uli

    2008-01-01

    Why are some traits constitutive and others inducible? The term costs often appears in work addressing this issue but may be ambiguously defined. This review distinguishes two conceptually distinct types of costs: phenotypic costs and plasticity costs. Phenotypic costs are assessed from patterns of...... covariation, typically between a focal trait and a separate trait relevant to fitness. Plasticity costs, separable from phenotypic costs, are gauged by comparing the fitness of genotypes with equivalent phenotypes within two environments but differing in plasticity and fitness. Subtleties associated with both...... types of costs are illustrated by a body of work addressing predator-induced plasticity. Such subtleties, and potential interplay between the two types of costs, have also been addressed, often in studies involving genetic model organisms. In some instances, investigators have pinpointed the mechanistic...

  9. Personalizing Access to Learning Networks

    Dolog, Peter; Simon, Bernd; Nejdl, Wolfgang;

    2008-01-01

    In this article, we describe a Smart Space for Learning™ (SS4L) framework and infrastructure that enables personalized access to distributed heterogeneous knowledge repositories. Helping a learner to choose an appropriate learning resource or activity is a key problem which we address in this fra......In this article, we describe a Smart Space for Learning™ (SS4L) framework and infrastructure that enables personalized access to distributed heterogeneous knowledge repositories. Helping a learner to choose an appropriate learning resource or activity is a key problem which we address...... in this framework, enabling personalized access to federated learning repositories with a vast number of learning offers. Our infrastructure includes personalization strategies both at the query and the query results level. Query rewriting is based on learning and language preferences; rule-based and ranking...

  10. Epigenetics in heart failure phenotypes.

    Berezin, Alexander

    2016-12-01

    Chronic heart failure (HF) is a leading clinical and public problem posing a higher risk of morbidity and mortality in different populations. HF appears to be in both phenotypic forms: HF with reduced left ventricular ejection fraction (HFrEF) and HF with preserved left ventricular ejection fraction (HFpEF). Although both HF phenotypes can be distinguished through clinical features, co-morbidity status, prediction score, and treatment, the clinical outcomes in patients with HFrEF and HFpEF are similar. In this context, investigation of various molecular and cellular mechanisms leading to the development and progression of both HF phenotypes is very important. There is emerging evidence that epigenetic regulation may have a clue in the pathogenesis of HF. This review represents current available evidence regarding the implication of epigenetic modifications in the development of different HF phenotypes and perspectives of epigenetic-based therapies of HF. PMID:27335803

  11. Capturing phenotypes for precision medicine.

    Robinson, Peter N; Mungall, Christopher J; Haendel, Melissa

    2015-10-01

    Deep phenotyping followed by integrated computational analysis of genotype and phenotype is becoming ever more important for many areas of genomic diagnostics and translational research. The overwhelming majority of clinical descriptions in the medical literature are available only as natural language text, meaning that searching, analysis, and integration of medically relevant information in databases such as PubMed is challenging. The new journal Cold Spring Harbor Molecular Case Studies will require authors to select Human Phenotype Ontology terms for research papers that will be displayed alongside the manuscript, thereby providing a foundation for ontology-based indexing and searching of articles that contain descriptions of phenotypic abnormalities-an important step toward improving the ability of researchers and clinicians to get biomedical information that is critical for clinical care or translational research. PMID:27148566

  12. Finding our way through phenotypes.

    Andrew R Deans

    2015-01-01

    Full Text Available Despite a large and multifaceted effort to understand the vast landscape of phenotypic data, their current form inhibits productive data analysis. The lack of a community-wide, consensus-based, human- and machine-interpretable language for describing phenotypes and their genomic and environmental contexts is perhaps the most pressing scientific bottleneck to integration across many key fields in biology, including genomics, systems biology, development, medicine, evolution, ecology, and systematics. Here we survey the current phenomics landscape, including data resources and handling, and the progress that has been made to accurately capture relevant data descriptions for phenotypes. We present an example of the kind of integration across domains that computable phenotypes would enable, and we call upon the broader biology community, publishers, and relevant funding agencies to support efforts to surmount today's data barriers and facilitate analytical reproducibility.

  13. Next-generation phenotypic screening.

    Warchal, Scott J; Unciti-Broceta, Asier; Carragher, Neil O

    2016-07-01

    Phenotypic drug discovery (PDD) strategies are defined by screening and selection of hit or lead compounds based on quantifiable phenotypic endpoints without prior knowledge of the drug target. We outline the challenges associated with traditional phenotypic screening strategies and propose solutions and new opportunities to be gained by adopting modern PDD technologies. We highlight both historical and recent examples of approved drugs and new drug candidates discovered by modern phenotypic screening. Finally, we offer a prospective view of a new era of PDD underpinned by a wealth of technology advances in the areas of in vitro model development, high-content imaging and image informatics, mechanism-of-action profiling and target deconvolution. PMID:27357617

  14. Finding our way through phenotypes.

    Deans, Andrew R; Lewis, Suzanna E; Huala, Eva; Anzaldo, Salvatore S; Ashburner, Michael; Balhoff, James P; Blackburn, David C; Blake, Judith A; Burleigh, J Gordon; Chanet, Bruno; Cooper, Laurel D; Courtot, Mélanie; Csösz, Sándor; Cui, Hong; Dahdul, Wasila; Das, Sandip; Dececchi, T Alexander; Dettai, Agnes; Diogo, Rui; Druzinsky, Robert E; Dumontier, Michel; Franz, Nico M; Friedrich, Frank; Gkoutos, George V; Haendel, Melissa; Harmon, Luke J; Hayamizu, Terry F; He, Yongqun; Hines, Heather M; Ibrahim, Nizar; Jackson, Laura M; Jaiswal, Pankaj; James-Zorn, Christina; Köhler, Sebastian; Lecointre, Guillaume; Lapp, Hilmar; Lawrence, Carolyn J; Le Novère, Nicolas; Lundberg, John G; Macklin, James; Mast, Austin R; Midford, Peter E; Mikó, István; Mungall, Christopher J; Oellrich, Anika; Osumi-Sutherland, David; Parkinson, Helen; Ramírez, Martín J; Richter, Stefan; Robinson, Peter N; Ruttenberg, Alan; Schulz, Katja S; Segerdell, Erik; Seltmann, Katja C; Sharkey, Michael J; Smith, Aaron D; Smith, Barry; Specht, Chelsea D; Squires, R Burke; Thacker, Robert W; Thessen, Anne; Fernandez-Triana, Jose; Vihinen, Mauno; Vize, Peter D; Vogt, Lars; Wall, Christine E; Walls, Ramona L; Westerfeld, Monte; Wharton, Robert A; Wirkner, Christian S; Woolley, James B; Yoder, Matthew J; Zorn, Aaron M; Mabee, Paula

    2015-01-01

    Despite a large and multifaceted effort to understand the vast landscape of phenotypic data, their current form inhibits productive data analysis. The lack of a community-wide, consensus-based, human- and machine-interpretable language for describing phenotypes and their genomic and environmental contexts is perhaps the most pressing scientific bottleneck to integration across many key fields in biology, including genomics, systems biology, development, medicine, evolution, ecology, and systematics. Here we survey the current phenomics landscape, including data resources and handling, and the progress that has been made to accurately capture relevant data descriptions for phenotypes. We present an example of the kind of integration across domains that computable phenotypes would enable, and we call upon the broader biology community, publishers, and relevant funding agencies to support efforts to surmount today's data barriers and facilitate analytical reproducibility. PMID:25562316

  15. Securing Data for Space Communications Project

    National Aeronautics and Space Administration — NASA's vision of data exchange between space and ground nodes would involve the space network accessing public infrastructure such as the internet. Hence, advanced...

  16. PhenoMiner: from text to a database of phenotypes associated with OMIM diseases.

    Collier, Nigel; Groza, Tudor; Smedley, Damian; Robinson, Peter N; Oellrich, Anika; Rebholz-Schuhmann, Dietrich

    2015-10-01

    Analysis of scientific and clinical phenotypes reported in the experimental literature has been curated manually to build high-quality databases such as the Online Mendelian Inheritance in Man (OMIM). However, the identification and harmonization of phenotype descriptions struggles with the diversity of human expressivity. We introduce a novel automated extraction approach called PhenoMiner that exploits full parsing and conceptual analysis. Apriori association mining is then used to identify relationships to human diseases. We applied PhenoMiner to the BMC open access collection and identified 13,636 phenotype candidates. We identified 28,155 phenotype-disorder hypotheses covering 4898 phenotypes and 1659 Mendelian disorders. Analysis showed: (i) the semantic distribution of the extracted terms against linked ontologies; (ii) a comparison of term overlap with the Human Phenotype Ontology (HP); (iii) moderate support for phenotype-disorder pairs in both OMIM and the literature; (iv) strong associations of phenotype-disorder pairs to known disease-genes pairs using PhenoDigm. The full list of PhenoMiner phenotypes (S1), phenotype-disorder associations (S2), association-filtered linked data (S3) and user database documentation (S5) is available as supplementary data and can be downloaded at http://github.com/nhcollier/PhenoMiner under a Creative Commons Attribution 4.0 license. Database URL: phenominer.mml.cam.ac.uk. PMID:26507285

  17. Scalable Lunar Surface Networks and Adaptive Orbit Access Project

    National Aeronautics and Space Administration — Innovative network architecture, protocols, and algorithms are proposed for both lunar surface networks and orbit access networks. Firstly, an overlaying...

  18. Discourses of space

    Ajtony, Zsuzsanna

    2013-01-01

    Ever since the emergence of the spatial turn in several scientific discourses, special attention has been paid to the surrounding space conceived as a construct created by the dynamics of human activity. The notion of space assists us in describing the most varied spheres of human existence. We can speak of various physical, metaphysical, social and cultural, and communicative spaces, as structuring components providing access to various literary, linguistic, social and cultural phenomena, th...

  19. Phenotypic MicroRNA Microarrays

    Veronica Soloveva

    2013-04-01

    Full Text Available Microarray technology has become a very popular approach in cases where multiple experiments need to be conducted repeatedly or done with a variety of samples. In our lab, we are applying our high density spots microarray approach to microscopy visualization of the effects of transiently introduced siRNA or cDNA on cellular morphology or phenotype. In this publication, we are discussing the possibility of using this micro-scale high throughput process to study the role of microRNAs in the biology of selected cellular models. After reverse-transfection of microRNAs and siRNA, the cellular phenotype generated by microRNAs regulated NF-κB expression comparably to the siRNA. The ability to print microRNA molecules for reverse transfection into cells is opening up the wide horizon for the phenotypic high content screening of microRNA libraries using cellular disease models.

  20. AccessCulture

    Valtysson, Bjarki

    of the European Union, and how its cultural policy responds to the changes that the digital paradigm has brought upon the field. The self-publishing features of various Web 2.0 platforms, along with the interactive and distributional potentials that the Internet offers, have given rise to what is referred to here...... in cultural production and consumption. The first part of this works looks at how these changes respond to the field of cultural policy, as well as suggesting a possible culturepolitical reaction in a model which I refer to as access culture. In terms of theoretical approach, the notion of digital cultural...... of YouTube, MySpace, Facebook and Flickr, along with lesser known platforms such as the animated short film Elephants Dream, the BBC's Creative Archive, various Internet artworks and the Internet Archive. I furthermore introduce the copyright system Creative Commons in order to suggest legal, widely...

  1. AccessCulture

    Valtysson, Bjarki

    the European Union, and how its cultural policy responds to the changes that the digital paradigm has brought upon the field. The self-publishing features of various Web 2.0 platforms, along with the interactive and distributional potentials that the Internet offers, have given rise to what is...... Flickr indicates changes in cultural production and consumption. The first part of this works looks at how these changes respond to the field of cultural policy, as well as suggesting a possible culturepolitical reaction in a model which I refer to as access culture. In terms of theoretical approach, the...... prosumers, I analyse the well-known examples of YouTube, MySpace, Facebook and Flickr, along with lesser known platforms such as the animated short film Elephants Dream, the BBC's Creative Archive, various Internet artworks and the Internet Archive. I furthermore introduce the copyright system Creative...

  2. Enhancing a Self-Access Website

    Troy Rubesch

    2010-09-01

    Full Text Available Since July of 2009, the Self-Access Learning Center (SALC at Kanda University has maintained a student-oriented Let’s Study English website (accessible at http://elisalc.org. The website acts as an extension of the physical space of the SALC, supporting the Center’s commitment to student access to information and materials which suit individual students’ learning needs, abilities and preferences. It also widens the learning environment- enabling students to access SALC information and resources virtually anywhere at any time. Lastly, it helps promote a community of language learners, encouraging student involvement in Learning Center activities.

  3. Leaf segmentation in plant phenotyping

    Scharr, Hanno; Minervini, Massimo; French, Andrew P.; Klukas, Christian; Kramer, David M.; Liu, Xiaoming; Luengo, Imanol; Pape, Jean Michel; Polder, Gerrit; Vukadinovic, Danijela; Yin, Xi; Tsaftaris, Sotirios A.

    2016-01-01

    Image-based plant phenotyping is a growing application area of computer vision in agriculture. A key task is the segmentation of all individual leaves in images. Here we focus on the most common rosette model plants, Arabidopsis and young tobacco. Although leaves do share appearance and shape cha

  4. JISC Open Access Briefing Paper

    Swan, Alma

    2005-01-01

    What Open Access is. What Open Access is not. How is Open Access provided? Open Access archives or repositories. Open Access journals. Why should authors provide Open Access to their work? Further information and resources

  5. Phenotypic constraints and phenotypic hitchhiking in a promiscuous enzyme

    Wagner, Andreas; Weikert, Christian

    2012-01-01

    Covarying phenotypic traits can limit natural selection’s ability to modify these traits. Most evolutionary studies on trait covariation use the comparative method to study complex traits of multicellular organisms. Simpler traits have the advantage of being amenable to experimental evolution. Here we study such a simple molecular system, the TEM-1 beta-lactamase protein, a promiscuous enzyme that hydrolyses antibiotics, and thus confers antibiotic resistance to bacteria. We mutagenized large...

  6. Targeted silver nanoparticles for ratiometric cell phenotyping

    Willmore, Anne-Mari A.; Simón-Gracia, Lorena; Toome, Kadri; Paiste, Päärn; Kotamraju, Venkata Ramana; Mölder, Tarmo; Sugahara, Kazuki N.; Ruoslahti, Erkki; Braun, Gary B.; Teesalu, Tambet

    2016-04-01

    Affinity targeting is used to deliver nanoparticles to cells and tissues. For efficient targeting, it is critical to consider the expression and accessibility of the relevant receptors in the target cells. Here, we describe isotopically barcoded silver nanoparticles (AgNPs) as a tool for auditing affinity ligand receptors in cells. Tumor penetrating peptide RPARPAR (receptor: NRP-1) and tumor homing peptide GKRK (receptor: p32) were used as affinity ligands on the AgNPs. The binding and uptake of the peptide-functionalized AgNPs by cultured PPC-1 prostate cancer and M21 melanoma cells was dependent on the cell surface expression of the cognate peptide receptors. Barcoded peptide-functionalized AgNPs were synthesized from silver and palladium isotopes. The cells were incubated with a cocktail of the barcoded nanoparticles [RPARPAR (R), GKRK (K), and control], and cellular binding and internalization of each type of nanoparticle was assessed by inductively coupled plasma mass spectrometry. The results of isotopic analysis were in agreement with data obtained using optical methods. Using ratiometric measurements, we were able to classify the PPC-1 cell line as mainly NRP-1-positive, with 75 +/- 5% R-AgNP uptake, and the M21 cell line as only p32-positive, with 89 +/- 9% K-AgNP uptake. The isotopically barcoded multiplexed AgNPs are useful as an in vitro ratiometric phenotyping tool and have potential uses in functional evaluation of the expression of accessible homing peptide receptors in vivo.Affinity targeting is used to deliver nanoparticles to cells and tissues. For efficient targeting, it is critical to consider the expression and accessibility of the relevant receptors in the target cells. Here, we describe isotopically barcoded silver nanoparticles (AgNPs) as a tool for auditing affinity ligand receptors in cells. Tumor penetrating peptide RPARPAR (receptor: NRP-1) and tumor homing peptide GKRK (receptor: p32) were used as affinity ligands on the AgNPs. The

  7. Collective space and urbanity

    Kajita, Masashi

    2015-01-01

    of evolving urbanity. The focus is on the essential and iconic collective space of the building 8TALLET- ramps and open stairs. How could space beyond private domain contribute to nurture social interactions among the residents but also enhance their relations to urban environments, while protecting...... the privacy of individual households? Envisaging potential functions and uses of the shared access route, this paper discusses the importance of continuous reflections of two perspectives: 1) architects’ logic (opportunistic attempt) of space making and 2) residents’ consideration and appropriation of spaces....

  8. Deciphering the Galaxy Guppy phenotype

    Philip Shaddock

    2011-01-01

    Full Text Available Animal breeding hobbyists have been useful to science because they identify and isolate colorcoat mutations that geneticists can in turn use in their studies of the development and differentiation ofcolor cells. This paper discusses a very interesting color mutant, the Japanese Galaxy, tracing its creationfrom back to a self-educated genetics hobbyist, Hoskiki Tsutsui. The paper discusses a constituent genepreviously studied by Dr. Violet Phang, the snakeskin gene (the linked body and fin genes Ssb and Sst.And it discusses a gene previously unknown to science, the Schimmelpfennig Platinum gene (Sc.Through crossing experiments, the author determines that the combination of these two genes producesan intermediate phenotype, the Medusa. Incorporating the Grass (Gr, another gene unknown to sciencegene into the Medusa through a crossover produces the Galaxy phenotype. Microscope studies of thesnakeskin pattern in Galaxies and snakeskins reveals some parallels with similar studies made of theZebrafish Danio.

  9. Phenotypic variability in Meesmann's dystrophy

    Ehlers, Niels; Hjortdal, Jesper; Nielsen, Kim;

    2008-01-01

    symptoms often include blurred vision and ocular irritation. Typical cases may be entirely free of complaints. Intermittent pain episodes, such as occur in recurrent erosion syndrome, are not the rule. Genetic sequencing indicated a familial relationship with the originally described Meesmann family......'s dystrophy occurs worldwide. The largest family described is the original German one, now supplemented with a Danish branch. Despite the presence of an identical genetic defect, the clinical phenotype varies. This suggests that non-KRT12-related mechanisms are responsible for the variation.......PURPOSE: To describe the phenotypic variability in Meesmann's microcystic dystrophy of the corneal epithelium based on a review of the literature and the presentation of a Danish family. METHODS: We carried out a clinical examination of the family and genetic sequencing of DNA. RESULTS: Subjective...

  10. Visualization of Growth Curve Data from Phenotype MicroarrayExperiments

    Jacobsen, Janet S.; Joyner, Dominique C.; Borglin, Sharon E.; Hazen, Terry C.; Arkin, Adam P.; Bethel, E. Wes

    2007-04-19

    Phenotype microarrays provide a technology to simultaneouslysurvey the response of an organism to nearly 2,000 substrates, includingcarbon, nitrogen and potassium sources; varying pH; varying saltconcentrations; and antibiotics. In order to more quickly and easily viewand compare the large number of growth curves produced by phenotypemicroarray experiments, we have developed software to produce and displaycolor images, each of which corresponds to a set of 96 growth curves.Using color images to represent growth curves data has proven to be avaluable way to assess experiment quality, compare replicates, facilitatecomparison of the responses of different organisms, and identifysignificant phenotypes. The color images are linked to traditional plotsof growth versus time, as well as to information about the experiment,organism, and substrate. In order to share and view information and dataproject-wide, all information, plots, and data are accessible using onlya Web browser.

  11. Unique phenotype in a patient with CHARGE syndrome

    Ten Svetlana

    2011-10-01

    Full Text Available Abstract CHARGE is a phenotypically heterogeneous autosomal dominant disorder recognized as a cohesive syndrome since the identification of CHD7 as a genetic etiology. Classic features include: Coloboma, Heart defects, Atresia choanae, Retarded growth and development, Genitourinary abnormalities, and Ear anomalies and/or deafness. With greater accessibility to genetic analysis, a wider spectrum of features are emerging, and overlap with disorders such as DiGeorge syndrome, Kallmann syndrome, and Hypoparathyroidism Sensorineural Deafness and Renal Disease syndrome, is increasingly evident. We present a patient with a unique manifestation of CHARGE syndrome, including primary hypoparathyroidism and a limb anomaly; to our knowledge, he is also the first CHARGE subject reported with bilateral multicystic dysplastic kidneys. Furthermore, with structural modeling and murine expression studies, we characterize a putative CHD7 G744S missense mutation. Our report continues to expand the CHARGE phenotype and highlights that stringent fulfillment of conventional criteria should not strictly guide genetic analysis.

  12. A side effect resource to capture phenotypic effects of drugs

    Kuhn, Michael; Campillos, Monica; Letunic, Ivica; Jensen, Lars Juhl; Bork, Peer

    2010-01-01

    The molecular understanding of phenotypes caused by drugs in humans is essential for elucidating mechanisms of action and for developing personalized medicines. Side effects of drugs (also known as adverse drug reactions) are an important source of human phenotypic information, but so far research...... on this topic has been hampered by insufficient accessibility of data. Consequently, we have developed a public, computer-readable side effect resource (SIDER) that connects 888 drugs to 1450 side effect terms. It contains information on frequency in patients for one-third of the drug-side effect...... pairs. For 199 drugs, the side effect frequency of placebo administration could also be extracted. We illustrate the potential of SIDER with a number of analyses. The resource is freely available for academic research at http://sideeffects.embl.de....

  13. Phenotypic expression in mucopolysaccharidosis VII.

    Bernsen, P L; Wevers, R. A.; Gabreëls, F J; Lamers, K J; Sonnen, A E; Stekhoven, J H

    1987-01-01

    beta-glucuronidase deficiency is an extremely rare disorder which is known to have a considerable phenotypic variation. A survey of the clinical findings in 19 previously reported patients with mucopolysaccharidosis VII is presented together with the results of clinical and biochemical studies in two further patients. Because a similar clinical picture is present in a heterozygotic sister it is doubted whether all signs and symptoms can be attributed to the beta-glucuronidase deficiency. The ...

  14. [Plasticity of the cellular phenotype].

    Chneiweiss, Hervé

    2011-01-01

    The tragical consequences of the Hiroshima and Nagasaki atomic bombs in 1945 were to lead to the discovery of hematopoietic stem cells and their phenotypic plasticity, in response to environmental factors. These concepts were much later extended to the founding cells of other tissues. In the following collection of articles, the mechanisms underlying this plasticity, at the frontiers of developmental biology and oncology, are illustrated in the case of various cell types of neural origin and of some tumours. PMID:21501574

  15. Wine Expertise Predicts Taste Phenotype

    Hayes, John E.; Pickering, Gary J

    2012-01-01

    Taste phenotypes have long been studied in relation to alcohol intake, dependence, and family history, with contradictory findings. However, on balance – with appropriate caveats about populations tested, outcomes measured and psychophysical methods used – an association between variation in taste responsiveness and some alcohol behaviors is supported. Recent work suggests super-tasting (operationalized via propylthiouracil (PROP) bitterness) not only associates with heightened response but a...

  16. Statistical models for trisomic phenotypes

    Lamb, N.E.; Sherman, S.L.; Feingold, E. [Emory Univ., Atlanta, GA (United States)

    1996-01-01

    Certain genetic disorders are rare in the general population but more common in individuals with specific trisomies, which suggests that the genes involved in the etiology of these disorders may be located on the trisomic chromosome. As with all aneuploid syndromes, however, a considerable degree of variation exists within each phenotype so that any given trait is present only among a subset of the trisomic population. We have previously presented a simple gene-dosage model to explain this phenotypic variation and developed a strategy to map genes for such traits. The mapping strategy does not depend on the simple model but works in theory under any model that predicts that affected individuals have an increased likelihood of disomic homozygosity at the trait locus. This paper explores the robustness of our mapping method by investigating what kinds of models give an expected increase in disomic homozygosity. We describe a number of basic statistical models for trisomic phenotypes. Some of these are logical extensions of standard models for disomic phenotypes, and some are more specific to trisomy. Where possible, we discuss genetic mechanisms applicable to each model. We investigate which models and which parameter values give an expected increase in disomic homozygosity in individuals with the trait. Finally, we determine the sample sizes required to identify the increased disomic homozygosity under each model. Most of the models we explore yield detectable increases in disomic homozygosity for some reasonable range of parameter values, usually corresponding to smaller trait frequencies. It therefore appears that our mapping method should be effective for a wide variety of moderately infrequent traits, even though the exact mode of inheritance is unlikely to be known. 21 refs., 8 figs., 1 tab.

  17. CERN Access Cards and Access Authorisations

    2003-01-01

    From the 01/05/2003, all problems relating to access cards and refusal of access to any zone, building or experiment within CERN must be addressed to the Centrale de Surveillance des Accès (CSA building 120) on 78877 or send an e-mail to Access.Surveillance@cern.ch. The responsibles for CERN access control have put into place a procedure with the CSA, Service Enregistrement and the Technical Control Room, to make sure that all problems get resolved in a proper and timely manner.

  18. Genetic background of phenotypic variation

    2007-01-01

    A noteworthy feature of the living world is its bewildering variability. A key issue in several biological disciplines is the achievement of an understanding of the hereditary basis of this variability. Two opposing, but not necessarily irreconcilable conceptions attempt to explain the underlying mechanism. The gene function paradigm postulates that phenotypic variance is generated by the polymorphism in the coding sequences of genes. However, comparisons of a great number of homologous gene and protein sequences have revealed that they predominantly remained functionally conserved even across distantly related phylogenic taxa. Alternatively, the gene regulation paradigm assumes that differences in the cis-regulatory region of genes do account for phenotype variation within species. An extension of this latter concept is that phenotypic variability is generated by the polyrnorphism in the overall gene expression profiles of gene networks.In other words, the activity of a particular gene is a system property determined both by the cis-regulatory sequences of the given genes and by the other genes of a gene network, whose expressions vary among individuals, too. Novel proponents of gene function paradigm claim that functional genetic variance within the coding sequences of regulatory genes is critical for the generation of morphological polymorphism. Note, however, that these developmental genes play direct regulatory roles in the control of gene expression.

  19. Preliminary behavioural study of Caballo Fino Chilote stallions with restricted access to space and water during summer Estudio preliminar del comportamiento de potros raza Caballo Fino Chilote con acceso restringido a espacio y agua durante el verano

    TA Tadich

    2010-01-01

    Full Text Available The Caballo Fino Chilote (CFCh is the only Chilean pony breed and a unique genetic resource. A group of seven CFCh stallions were observed for 60 hours, during summer, at INIA- Butalcura research station, Chiloé Island, under restricted space and access to water conditions. Scan sampling every five minutes was used to register 5 behavioural states and continuous focal sampling for 19 behavioural events. Inter-male interactions had a low frequency of presentation being avoidance (1.2 average events per stallion per day the most common. Overall stallions spent 55.89% (± 4.3% of their time foraging, 2.5% (± 0.82% in locomotion, 7.26% (± 0.82% standing alert, 32.24% (± 2.7% resting and 1.86% (± 0.64 in other behaviours. Foraging was the main activity, its occurrence was significantly lower (P El Caballo Fino Chilote (CFCh es la única raza de pony chileno y un recurso genético único. Un grupo de 7 potros CFCh fue observado por 60 horas, durante el verano, en la estación experimental del INIA-Butalcura, Isla de Chiloé, bajo condiciones de restricción de espacio y agua. El método de muestreo por escaneo se utilizó cada 5 minutos para evaluar estados conductuales y focal continuo para los eventos. Se registraron 5 estados y 19 eventos conductuales. Las interacciones entre potros tuvieron una frecuencia de presentación baja, siendo la más común “evasión” con un promedio de 1,2 eventos por potro por día. Los equinos utilizaron un 55,89% (± 4,3% del tiempo en forrajear, 2,5% (± 0,82% en locomoción, 7,26% (± 0,82% de pie alerta, 32,24% (± 2,7% descansando y 1,86% (± 0,64 en otras actividades. Forrajeo fue la principal actividad, siendo significativamente más baja (P < 0,05 durante el mediodía, periodo donde el descanso fue significativamente mayor (P < 0,05 comparado con los periodos de mañana y tarde. Se encontró una correlación positiva significativa entre temperatura y descanso y una correlación negativa significativa

  20. Open Access Publishing

    Morrison, Heather

    2007-01-01

    An overview of open access publishing, for college faculty. Presents a definition of open access, the two roads to open access (OA publishing and self-archiving), overview of business models for open access, and examples of open access journals, with a focus on journals developed in British Columbia, including one (Topics in Scholarly Communication) developed by graduate students as a class assignment, and another developed by high school students (The Pink Voice). Includes a handout of res...

  1. Advocacy for Open Access

    Das, Anup-Kumar

    2015-01-01

    In the scholarly communications world, the concept of open access publishing has proliferated at faster pace since the global open access declarations such as the Budapest Open Access Initiative (BOAI) in February 2002 and the Berlin Declaration on Open Access to Knowledge in the Sciences and Humanities in October 2003. After one decade of these two epoch-making declarations, we see growing instances of open access resources due to collective efforts put by the advocacy organizations, advocac...

  2. Open Access Policy Update

    Morrison, Heather

    2007-01-01

    This presentation explores the status of open access policy developments internationally, and particularly in Canada, as of April 2007. While open access resources are substantial, and growing rapidly, the primary issue for open access archives (institutional repositories) is content acquisition, and few researchers fully understand open access, illustrating an ongoing need for policy. Open access policy initiatives are happening around the world. Sherpa Juliet lists more than 20 funding a...

  3. Open accessibility data interlinking

    Ding, Chaohai; Wald, Mike; Wills, Gary

    2014-01-01

    This paper presents the research of using Linked Open Data to enhance accessibility data for accessible travelling. Open accessibility data is the data related to the accessibility issues associated with geographical data, which could benefit people with disabilities and their special needs. With the aim of addressing the gap between users’ special needs and data, this paper presents the results of a survey of open accessibility data retrieved from four different sources in the UK. An ontolog...

  4. Multivariate Analysis of Genotype-Phenotype Association.

    Mitteroecker, Philipp; Cheverud, James M; Pavlicev, Mihaela

    2016-04-01

    With the advent of modern imaging and measurement technology, complex phenotypes are increasingly represented by large numbers of measurements, which may not bear biological meaning one by one. For such multivariate phenotypes, studying the pairwise associations between all measurements and all alleles is highly inefficient and prevents insight into the genetic pattern underlying the observed phenotypes. We present a new method for identifying patterns of allelic variation (genetic latent variables) that are maximally associated-in terms of effect size-with patterns of phenotypic variation (phenotypic latent variables). This multivariate genotype-phenotype mapping (MGP) separates phenotypic features under strong genetic control from less genetically determined features and thus permits an analysis of the multivariate structure of genotype-phenotype association, including its dimensionality and the clustering of genetic and phenotypic variables within this association. Different variants of MGP maximize different measures of genotype-phenotype association: genetic effect, genetic variance, or heritability. In an application to a mouse sample, scored for 353 SNPs and 11 phenotypic traits, the first dimension of genetic and phenotypic latent variables accounted for >70% of genetic variation present in all 11 measurements; 43% of variation in this phenotypic pattern was explained by the corresponding genetic latent variable. The first three dimensions together sufficed to account for almost 90% of genetic variation in the measurements and for all the interpretable genotype-phenotype association. Each dimension can be tested as a whole against the hypothesis of no association, thereby reducing the number of statistical tests from 7766 to 3-the maximal number of meaningful independent tests. Important alleles can be selected based on their effect size (additive or nonadditive effect on the phenotypic latent variable). This low dimensionality of the genotype-phenotype map

  5. Kennedy Space Center

    Griffin, Amanda

    2012-01-01

    Among 2011's many accomplishments, we safely retired the Space Shuttle Program after 30 incredible years; completed the International Space Station and are taking steps to enable it to reach its full potential as a multi-purpose laboratory; and helped to expand scientific knowledge with missions like Aquarius, GRAIL, and the Mars Science Laboratory. Responding to national budget challenges, we are prioritizing critical capabilities and divesting ourselves of assets no longer needed for NASA's future exploration programs. Since these facilities do not have to be maintained or demolished, the government saves money. At the same time, our commercial partners save money because they do not have to build new facilities. It is a win-win for everyone. Moving forward, 2012 will be even more historically significant as we celebrate the 50th Anniversary of Kennedy Space Center. In the coming year, KSC will facilitate commercial transportation to low-Earth orbit and support the evolution of the Space Launch System and Orion crew vehicle as they ready for exploration missions, which will shape how human beings view the universe. While NASA's Vision is to lead scientific and technological advances in aeronautics and space for a Nation on the frontier of discovery KSC's vision is to be the world's preeminent launch complex for government and commercial space access, enabling the world to explore and work in space. KSC's Mission is to safely manage, develop, integrate, and sustain space systems through partnerships that enable innovative, diverse access to space and inspires the Nation's future explorers.

  6. Accessible Near-Earth Objects (NEOs)

    Barbee, Brent W.

    2015-01-01

    Near Earth Objects (NEOs) are asteroids and comets whose orbits are in close proximity to Earth's orbit; specifically, they have perihelia less than 1.3 astronomical units. NEOs particularly near Earth asteroids (NEAs) are identified as potential destinations for future human exploration missions. In this presentation I provide an overview of the current state of knowledge regarding the astrodynamical accessibility of NEAs according to NASA's Near Earth Object Human Space Flight Accessible Targets Study (NHATS). I also investigate the extremes of NEA accessibility using case studies and illuminate the fact that a space-based survey for NEOs is essential to expanding the set of known accessible NEAs for future human exploration missions.

  7. Knowledge-based analysis of phenotypes

    Hoendorf, Robert

    2016-01-27

    Phenotypes are the observable characteristics of an organism, and they are widely recorded in biology and medicine. To facilitate data integration, ontologies that formally describe phenotypes are being developed in several domains. I will describe a formal framework to describe phenotypes. A formalized theory of phenotypes is not only useful for domain analysis, but can also be applied to assist in the diagnosis of rare genetic diseases, and I will show how our results on the ontology of phenotypes is now applied in biomedical research.

  8. Professional Access 2013 programming

    Hennig, Teresa; Hepworth, George; Yudovich, Dagi (Doug)

    2013-01-01

    Authoritative and comprehensive coverage for building Access 2013 Solutions Access, the most popular database system in the world, just opened a new frontier in the Cloud. Access 2013 provides significant new features for building robust line-of-business solutions for web, client and integrated environments.  This book was written by a team of Microsoft Access MVPs, with consulting and editing by Access experts, MVPs and members of the Microsoft Access team. It gives you the information and examples to expand your areas of expertise and immediately start to develop and upgrade projects. Exp

  9. Access 2010 Programmer's Reference

    Hennig, Teresa; Griffith, Geoffrey L

    2010-01-01

    A comprehensive guide to programming for Access 2010 and 2007. Millions of people use the Access database applications, and hundreds of thousands of developers work with Access daily. Access 2010 brings better integration with SQL Server and enhanced XML support; this Wrox guide shows developers how to take advantage of these and other improvements. With in-depth coverage of VBA, macros, and other programming methods for building Access applications, this book also provides real-world code examples to demonstrate each topic.: Access is the leading database that is used worldwide; While VBA rem

  10. Space Particle Data from Combined X-ray Dosimeter (CXD) and Burst Detection Dosimeter (BDD) instruments on the GPS constellation from 2014-01-01 to 2014-01-31 (NCEI Accession 0150968)

    National Oceanic and Atmospheric Administration, Department of Commerce — Energetic particle data from the CXD and BDD instrument on the GPS constellation are available to the space weather research community. The release of these data...

  11. Accessibility in the Smart City

    Giuseppe Trieste

    2014-07-01

    Full Text Available FIABA is a cultural route for all, its aim is to promote a Global Accessibility and a Universal Usability through the removal of architectural, cultural, psychological and sensory barriers. FIABA is carrying out a real change and a cultural renewal in the name of equal opportunities. Respect for the environment in which we live is also a duty towards the younger generations to whom we must deliver a world in which free movement and the normal use of spaces are goals already achieved. There are millions of citizens who, because of their physical conditions are prisoners in their homes because there isn’t any elevator or any elevator maintenance. FIABA project aims at implementing “a Space for all” or “a landscape for all” following the path of the ONU Convention on the Rights of People with disabilities with an emphasis on architectural, cultural, and psychological barriers, the last ones in particular, create barriers to equal opportunities and they are often carriers of discrimination. The principle of accessibility is invoked in Article 9 of the Convention which confirms the principle that people have a right to live independently and participate fully in all spheres of life and thus States are required to take all necessary measures to ensure accessibility to physical environment, transport, information and communications, including systems and technologies of information and communication and other facilities and services open to the public, both in urban and rural areas.

  12. Phenotyping bananas for drought resistance

    IyyakuttyRavi

    2013-01-01

    Drought has emerged as one of the major constraints in banana production. Its effects are pronounced substantially in the tropics and sub-tropics of the world due to climate change. Bananas are quite sensitive to drought; however, genotypes with ‘B’ genome are more tolerant to abiotic stresses than those solely based on ‘A’ genome. In particular, bananas with ‘ABB’ genomes are more tolerant to drought and other abiotic stresses than other genotypes. A good phenotyping plan is a prerequisite f...

  13. Phenotyping bananas for drought resistance

    Ravi, Iyyakkutty; Uma, Subbaraya; Vaganan, Muthu Mayil; Mustaffa, Mohamed M.

    2013-01-01

    Drought has emerged as one of the major constraints in banana production. Its effects are pronounced substantially in the tropics and sub-tropics of the world due to climate change. Bananas are quite sensitive to drought; however, genotypes with “B” genome are more tolerant to abiotic stresses than those solely based on “A” genome. In particular, bananas with “ABB” genomes are more tolerant to drought and other abiotic stresses than other genotypes. A good phenotyping plan is a prerequisite f...

  14. Hemogoblin phenotypes in Murgese horse

    Carmela Bottiglieri; Rosario Rullo; Aldo Di Luccia; Elisa Pieragostini

    2010-01-01

    In this note we describe two new equine hemoglobin phenotypes found during a survey of the Murgese horse, a rare  Apulian native breed, among whose ancestors the Arabian surely plays an important role. To date we have analysed about  300 individual hemolysates by different chromatographic analyses (PAGIF, IPG, CMC). The results pointed out two unusu-  al patterns where the ratio of the α24Phe60Gln band to the α24Phe60Lys band was 93:7 and 70:30 rather than 60:40&nbs...

  15. Phenotypic MicroRNA Microarrays

    Veronica Soloveva; Michel Liuzzi; Jin Yeop Kim; Hi Chul Kim; Jin Yeong Heo; Yong-Jun Kwon

    2013-01-01

    Microarray technology has become a very popular approach in cases where multiple experiments need to be conducted repeatedly or done with a variety of samples. In our lab, we are applying our high density spots microarray approach to microscopy visualization of the effects of transiently introduced siRNA or cDNA on cellular morphology or phenotype. In this publication, we are discussing the possibility of using this micro-scale high throughput process to study the role of microRNAs in the bio...

  16. Evaluation of Semantic-Based Information Retrieval Methods in the Autism Phenotype Domain

    Hassanpour, Saeed; O’Connor, Martin J.; Das, Amar K.

    2011-01-01

    Biomedical ontologies are increasingly being used to improve information retrieval methods. In this paper, we present a novel information retrieval approach that exploits knowledge specified by the Semantic Web ontology and rule languages OWL and SWRL. We evaluate our approach using an autism ontology that has 156 SWRL rules defining 145 autism phenotypes. Our approach uses a vector space model to correlate how well these phenotypes relate to the publications used to define them. We compare a...

  17. Physical Access Control Database

    Department of Transportation — This data set contains the personnel access card data (photo, name, activation/expiration dates, card number, and access level) as well as data about turnstiles and...

  18. Hemodialysis access - self care

    ... an infection. To prevent infection: Avoid bumping or cutting your access. DO NOT lift anything heavy with ... Check the pulse in your access arm. You should feel blood rushing through that feels like a vibration. This vibration is ...

  19. Design for Accessibility

    Herriott, Richard

    2012-01-01

    A report on how nine rail builder, operators and transport designers deal with design for accessibility......A report on how nine rail builder, operators and transport designers deal with design for accessibility...

  20. Access Customized Forms

    Cosma Emil; Jeflea Victor

    2010-01-01

    By using Word, Excel or PowerPoint one can automate routine operations using the VBA language (Visual Basic for Applications). This language is also used in Access, allowing access to data stored in tables or queries. Thus, Access and VBA resources can be used together. Access is designed for programming forms and reports (among other things), so there won’t be found any of the VBA editor’s specific forms.

  1. Open Access : Three Perspectives

    Owen, G.W. Brian; Waller, Andrew; Perkins, Lesley

    2006-01-01

    Open Access has the potential to transform scholarly communications and access to academic research, especially for libraries in smaller institutions or in economically disadvantaged areas around the world. This important and timely panel discussion will focus on three aspects of open access: 1) the library as publisher, 2) the librarian as archivist, and 3) the role of open access in the careers of upcoming professionals.

  2. Cognitive Access to TVWS in India

    Patil, Kishor P.; Skouby, Knud Erik; Prasad, Ramjee

    2013-01-01

    performed spectrum measurements of TV band in Pune, India. Our result shows poor spectrum utilization in TV band, and good potential for Cognitive radio operation. Digital switchover in India will generate golden opportunity for empowering rural India. As majority of India’s population lives in rural part......The digital transition of TV transmission will make available some TV frequencies which are to be geographically unused called as TV White Spaces. The important regulatory trend in the context of Dynamic Spectrum Access (DSA) is the Cognitive access of TV white Spaces. In this context, we have...

  3. Open Access Alternatives

    Tenopir, Carol

    2004-01-01

    Open access publishing is a hot topic today. But open access publishing can have many different definitions, and pros and cons vary with the definitions. Open access publishing is especially attractive to companies and small colleges or universities that are likely to have many more readers than authors. A downside is that a membership fee sounds…

  4. NCI Workshop Report: Clinical and Computational Requirements for Correlating Imaging Phenotypes with Genomics Signatures

    Rivka Colen

    2014-10-01

    Full Text Available The National Cancer Institute (NCI Cancer Imaging Program organized two related workshops on June 26–27, 2013, entitled “Correlating Imaging Phenotypes with Genomics Signatures Research” and “Scalable Computational Resources as Required for Imaging-Genomics Decision Support Systems.” The first workshop focused on clinical and scientific requirements, exploring our knowledge of phenotypic characteristics of cancer biological properties to determine whether the field is sufficiently advanced to correlate with imaging phenotypes that underpin genomics and clinical outcomes, and exploring new scientific methods to extract phenotypic features from medical images and relate them to genomics analyses. The second workshop focused on computational methods that explore informatics and computational requirements to extract phenotypic features from medical images and relate them to genomics analyses and improve the accessibility and speed of dissemination of existing NIH resources. These workshops linked clinical and scientific requirements of currently known phenotypic and genotypic cancer biology characteristics with imaging phenotypes that underpin genomics and clinical outcomes. The group generated a set of recommendations to NCI leadership and the research community that encourage and support development of the emerging radiogenomics research field to address short-and longer-term goals in cancer research.

  5. Pro Access 2010 Development

    Collins, Mark

    2011-01-01

    Pro Access 2010 Development is a fundamental resource for developing business applications that take advantage of the features of Access 2010 and the many sources of data available to your business. In this book, you'll learn how to build database applications, create Web-based databases, develop macros and Visual Basic for Applications (VBA) tools for Access applications, integrate Access with SharePoint and other business systems, and much more. Using a practical, hands-on approach, this book will take you through all the facets of developing Access-based solutions, such as data modeling, co

  6. Android Access Control Extension

    Anton Baláž

    2015-12-01

    Full Text Available The main objective of this work is to analyze and extend security model of mobile devices running on Android OS. Provided security extension is a Linux kernel security module that allows the system administrator to restrict program's capabilities with per-program profiles. Profiles can allow capabilities like network access, raw socket access, and the permission to read, write, or execute files on matching paths. Module supplements the traditional Android capability access control model by providing mandatory access control (MAC based on path. This extension increases security of access to system objects in a device and allows creating security sandboxes per application.

  7. Access 2013 for dummies

    Ulrich Fuller, Laurie

    2013-01-01

    The easy guide to Microsoft Access returns with updates on the latest version! Microsoft Access allows you to store, organize, view, analyze, and share data; the new Access 2013 release enables you to build even more powerful, custom database solutions that integrate with the web and enterprise data sources. Access 2013 For Dummies covers all the new features of the latest version of Accessand serves as an ideal reference, combining the latest Access features with the basics of building usable databases. You'll learn how to create an app from the Welcome screen, get support

  8. Phenotypic mismatches reveal escape from arms-race coevolution.

    Charles T Hanifin

    2008-03-01

    Full Text Available Because coevolution takes place across a broad scale of time and space, it is virtually impossible to understand its dynamics and trajectories by studying a single pair of interacting populations at one time. Comparing populations across a range of an interaction, especially for long-lived species, can provide insight into these features of coevolution by sampling across a diverse set of conditions and histories. We used measures of prey traits (tetrodotoxin toxicity in newts and predator traits (tetrodotoxin resistance of snakes to assess the degree of phenotypic mismatch across the range of their coevolutionary interaction. Geographic patterns of phenotypic exaggeration were similar in prey and predators, with most phenotypically elevated localities occurring along the central Oregon coast and central California. Contrary to expectations, however, these areas of elevated traits did not coincide with the most intense coevolutionary selection. Measures of functional trait mismatch revealed that over one-third of sampled localities were so mismatched that reciprocal selection could not occur given current trait distributions. Estimates of current locality-specific interaction selection gradients confirmed this interpretation. In every case of mismatch, predators were "ahead" of prey in the arms race; the converse escape of prey was never observed. The emergent pattern suggests a dynamic in which interacting species experience reciprocal selection that drives arms-race escalation of both prey and predator phenotypes at a subset of localities across the interaction. This coadaptation proceeds until the evolution of extreme phenotypes by predators, through genes of large effect, allows snakes to, at least temporarily, escape the arms race.

  9. Open Access @ DTU

    Ekstrøm, Jeannette

    Open Access is high on the agenda in Denmark and internationally. Denmark has announced a national strategy for Open Access that aims to achieve Open Access to 80% in 2017 and 100% in 2022 to peer review research articles. All public Danish funders as well as H2020 requires that all peer review...... articles that is an outcome of their funding will be Open Access. Uploading your full texts (your final author manuscript after review ) to DTU Orbit is a fundamental part of providing Open Access to your research. We are here to answer all your questions with regards to Open Access and related topics such...... as copyright, DTU Orbit, Open Access journals, APCs, Vouchers etc....

  10. Urban Railway Accessibility

    GUAN Hongzhi; YIN Yuanfei; YAN Hai; HAN Yan; QIN Huanmei

    2007-01-01

    Effective use of urban rapid railway systems requires that the railway systems be effectively connected with other transportation modes so that they are accessible. This paper uses the logit model and data to analyze the factors influencing railway access choices in a railway choice access model. The results indicate that access time, access cost, and access distance are factors significantly affecting railway access choices. The user's income significantly affects the probability of choosing to walk rather than to take a taxi,but is not related to choosing buses or bicycles. Vehicle ownership significantly affects the probability of choosing a taxi, but is not significantly related to the other modes. The conclusions provide an analysis tool for urban railway planning and construction.

  11. Morphophysiological characterization of giant missionary grass accessions

    Cristiano Reschke Lajús

    2011-11-01

    Full Text Available In this study, the phenotypic diversity of five accessions of giant missionary grass (Axonopus jesuiticus × A. scoparius was evaluated by using morphophysiological traits. Accessions V 14337, V 14403, V 14404, V 14405 and V 14406 are hybrids derived from spontaneous crossing that occurred in Vale do Itajaí, Santa Catarina, Brazil. Plants were cultivated in greenhouse and evaluated at 60, 90, 120, 150, 180, 210 and 240 days of growth. Variation was observed for dry matter production, phenology and morphological traits, showing the possibility of selection. Flowering started at 210 days of growth and only in accessions V 14337 and V 14404. The Mahalanobis distance among accessions ranged from 35.64 (V 14403 and V 14405 to 183.38 (V 14337 and V 14405, and three groups were formed, based on 17 vegetative morphophysiological traits evaluated in plants with 180 days of growth: G1 (V 14403, V 14405, G2 (V 14406 and G3 (V 14337, V 14404. Group I presented the greatest dry matter production of stolon and aboveground, which were the traits with the largest relative contribution to genetic divergence, 38.67% and 38.31%, respectively. Accessions V 14403 and V 14405 are the most promising for agronomic evaluations that address their records as forage cultivars.

  12. Accessibility and Urban Mobility In Triângulo Mineiro

    Humberto Ferreira Silva Minéu

    2014-07-01

    Full Text Available This article discusses the accessibility and urban mobility at public spaces – squares – of three towns in Triangulo Mineiro, Minas Gerais, Brazil. The objective is to analyze the accessibility and urban mobility, according with specifics laws and current norms. The results showed some inadequacies concerning the conditions of accessibility and deficiencies in urban mobility. The analysis presents the necessity to adequate the infrastructures of the public spaces and an effective urban politic, which promotes the social inclusion, with accessibility and mobility to all citizens.

  13. Hemogoblin phenotypes in Murgese horse

    Carmela Bottiglieri

    2010-01-01

    Full Text Available In this note we describe two new equine hemoglobin phenotypes found during a survey of the Murgese horse, a rare  Apulian native breed, among whose ancestors the Arabian surely plays an important role. To date we have analysed about  300 individual hemolysates by different chromatographic analyses (PAGIF, IPG, CMC. The results pointed out two unusu-  al patterns where the ratio of the α24Phe60Gln band to the α24Phe60Lys band was 93:7 and 70:30 rather than 60:40  which would have been expected of BII homozygote. Given that the three horses exhibiting the unusual patterns shared  a common ancestor and that none of the possible combinations of the known haplotypes can account for 7-8%  α24Phe60Lys, reasonably a triplicated arrangement has to be postulated. 

  14. Automated Computer Access Request System

    Snook, Bryan E.

    2010-01-01

    The Automated Computer Access Request (AutoCAR) system is a Web-based account provisioning application that replaces the time-consuming paper-based computer-access request process at Johnson Space Center (JSC). Auto- CAR combines rules-based and role-based functionality in one application to provide a centralized system that is easily and widely accessible. The system features a work-flow engine that facilitates request routing, a user registration directory containing contact information and user metadata, an access request submission and tracking process, and a system administrator account management component. This provides full, end-to-end disposition approval chain accountability from the moment a request is submitted. By blending both rules-based and rolebased functionality, AutoCAR has the flexibility to route requests based on a user s nationality, JSC affiliation status, and other export-control requirements, while ensuring a user s request is addressed by either a primary or backup approver. All user accounts that are tracked in AutoCAR are recorded and mapped to the native operating system schema on the target platform where user accounts reside. This allows for future extensibility for supporting creation, deletion, and account management directly on the target platforms by way of AutoCAR. The system s directory-based lookup and day-today change analysis of directory information determines personnel moves, deletions, and additions, and automatically notifies a user via e-mail to revalidate his/her account access as a result of such changes. AutoCAR is a Microsoft classic active server page (ASP) application hosted on a Microsoft Internet Information Server (IIS).

  15. Clinical Asthma Phenotypes and Therapeutic Responses

    Zedan, M.; Attia, G.; Zedan, M. M.; Osman, A; Abo-Elkheir, N.; Maysara, N.; Barakat, T.; Gamil, N.

    2013-01-01

    Asthma is a heterogeneous disease that means not all asthmatics respond to the same treatment. We hypothesize an approach to characterize asthma phenotypes based on symptomatology (shortness of breath (SOB), cough, and wheezy phenotypes) in correlation with airway inflammatory biomarkers and FEV1. We aimed to detect whether those clinical phenotypes have an impact on the response to asthma medications. Two hundred three asthmatic children were allocated randomly to receive either montelukast ...

  16. Phenotype Information Retrieval for Existing GWAS Studies

    Alipanah, Neda; Lin, Ko-Wei; Venkatesh, Vinay; Farzaneh, Seena; Kim, Hyeon-eui

    2013-01-01

    The database of Genotypes and Phenotypes (dbGaP) is archiving the results of different Genome Wide Association Studies (GWAS). dbGaP has a multitude of phenotype variables, but they are not harmonized across studies. We proposed a method to standardize phenotype variables by classifying similar variables based on semantic distances. We first extracted variables description, enriched them using domain knowledge, and computed the distances among them. We used clustering techniques to classify t...

  17. Phenotypes and Survival of Hatchling Lizards

    Warner, Daniel Augustus

    2001-01-01

    The phenotypes of hatchling reptiles are influenced by the environmental conditions that embryos experience during incubation, by yolk invested into the egg, and by the genetic contributions of the parents. Phenotypic traits are influenced by these factors in ways that potentially affect the fitness of hatchlings. The physical conditions that embryos experience within the nest affects development, hatching success, and hatchling phenotypes. Thus, the nest site that a female selects can inf...

  18. The Space Weather Reanalysis

    Kihn, E. A.; Ridley, A. J.; Zhizhin, M.

    2002-12-01

    The objective of this project is to generate a complete 11 year space weather representation using physically consistent data-driven space weather models. The project will create a consistent, integrated historical record of the near Earth space environment by coupling observational data from space environmental monitoring systems archived at NGDC with data-driven, physically based numerical models. The resulting product will be an enhanced look at the space environment on consistent grids, time resolution, coordinate systems and containing key fields allowing an interested user to quickly and easily incorporate the impact of the near-Earth space climate in environmentally sensitive models. Currently there are no easily accessible long term climate archives available for the space-weather environment. Just as with terrestrial weather it is crucial to understand both daily weather forecasts as well as long term climate changes, so this project will demonstrate the ability to generate a meaningful and physically derived space weather climatology. The results of this project strongly support the DOD's Environmental Scenario Generator (ESG) project. The ESG project provides tools for intellegent data mining, classification and event detection which could be applied to a historical space-weather database. The two projects together provide a suite of tools for the user interested in modeling the effect of the near-earth space environment. We will present results and methodologies developed during the first two years of effort in the project.

  19. Immunogenetic phenotypes in inflammatory bowel disease

    Marla C Dubinsky; Kent Taylor; Stephan R Targan; Jerome I Rotter

    2006-01-01

    The currently accepted etiopathogenic hypothesis suggests that the chronic intestinal inflammation and related systemic manifestations characteristic of inflammatory bowel disease (IBD) are due to an overly aggressive or pathologic immune response to resident luminal bacterial constituents. Predisposing factors are genetic dysregulation of mucosal immune responses and/or barrier function, with onset triggered by environmental stimuli. These factors and their interactions may also be important determinants of disease phenotype and disease progression. The emergence of immunogenetic phenotypes lends support to the proposed hypothesis that susceptibility genes regulate distinct immune processes, driven by luminal antigens, expressed as specific immune phenotypes which in turn influence clinical phenotypes in IBD patient

  20. Phenotypic heterogeneity of Streptococcus mutans in dentin.

    Rupf, S; Hannig, M; Breitung, K; Schellenberger, W; Eschrich, K; Remmerbach, T; Kneist, S

    2008-12-01

    Information concerning phenotypic heterogeneity of Streptococcus mutans in carious dentin is sparse. Matrix-assisted laser-desorption/ionization-time-of-flight mass-spectrometry (MALDI-TOF-MS) facilitates the phenotypic differentiation of bacteria to the subspecies level. To verify a supposed influence of restorative treatment on the phenotypic heterogeneity of S. mutans, we isolated and compared a total of 222 S. mutans strains from dentin samples of 21 human deciduous molars during caries excavation (T(1)) and 8 wks (T(2)) after removal of the temporary restoration. Phenotypic heterogeneity was determined by MALDI-TOF-MS and hierarchical clustering. Thirty-six distinct S. mutans phenotypes could be identified. Although indistinguishable phenotypes were found in the same teeth at T(1) and T(2), as well as in different teeth of individual participants, the phenotypic heterogeneity increased significantly, from 1.4 phenotypes per S. mutans-positive dentin sample at T(1) to 2.2 phenotypes at T(2). We attribute this to an adaptation of S. mutans to the modified environment under the restoration following caries excavation. PMID:19029088

  1. High level of molecular and phenotypic biodiversity in Jatropha curcas from Central America compared to Africa, Asia and South America

    Montes Osorio, Luis; Torres Salvador, Andres; Jongschaap, Raymond Elmar; Azurdia Perez, Cesar; Berduo Sandoval, Julio; Trindade, Luisa; Visser, Richard Gerardus; van Loo, Eibertus

    2014-01-01

    Background The main bottleneck to elevate jatropha (Jatropha curcas L.) from a wild species to a profitable biodiesel crop is the low genetic and phenotypic variation found in different regions of the world, hampering efficient plant breeding for productivity traits. In this study, 182 accessions from Asia (91), Africa (35), South America (9) and Central America (47) were evaluated at genetic and phenotypic level to find genetic variation and important traits for oilseed production. Results G...

  2. Space Shuttle Drawing

    2004-01-01

    The Apollo program demonstrated that men could travel into space, perform useful tasks there, and return safely to Earth. But space had to be more accessible. This led to the development of the Space Shuttle. The Shuttle's major components are the orbiter spacecraft; the three main engines, with a combined thrust of more than 1.2 million pounds; the huge external tank (ET) that feeds the liquid hydrogen fuel and liquid oxygen oxidizer to the three main engines; and the two solid rocket boosters (SRBs), with their combined thrust of some 5.8 million pounds, that provide most of the power for the first two minutes of flight. Crucially involved with the Space Shuttle program virtually from its inception, the Marshall Space Flight Center (MSFC) played a leading role in the design, development, testing, and fabrication of many major Shuttle propulsion components.

  3. Virtual venue management users manual : access grid toolkit documentation, version 2.3.

    Judson, I. R.; Lefvert, S.; Olson, E.; Uram, T. D.; Mathematics and Computer Science

    2007-10-24

    An Access Grid Venue Server provides access to individual Virtual Venues, virtual spaces where users can collaborate using the Access Grid Venue Client software. This manual describes the Venue Server component of the Access Grid Toolkit, version 2.3. Covered here are the basic operations of starting a venue server, modifying its configuration, and modifying the configuration of the individual venues.

  4. Access to the Online Planetary Research Literature

    Henneken, E. A.; Accomazzi, A.; Kurtz, M. J.; Grant, C. S.; Thompson, D.; Di Milia, G.; Bohlen, E.; Murray, S. S.

    2009-12-01

    The SAO/NASA Astrophysics Data System (ADS) provides various free services for finding, accessing, and managing bibliographic data, including a basic search form, the myADS notification service, and private library capabilities (a useful tool for building bibliographies), plus access to scanned pages of published articles. The ADS also provides powerful search capabilities, allowing users to find e.g. the most instructive or most important articles on a given subject . For the Planetary Sciences, the citation statistics of the ADS have improved considerably with the inclusion of the references from Elsevier journals, including Icarus, Planetary and Space Science, and Earth and Planetary Science Letters. We currently have about 78 journals convering the planetary and space sciences (Advances in Space Research, Icarus, Solar Physics, Astrophusics and Space Science, JGRE, Meteoritics, to name a few). Currently, this set of journals represents about 180,000 articles and 1.1 million references. Penetration into the Solar Physics, Planetary Sciences and Geophysics community has increased significantly. During the period 2004-2008, user access to JGR and Icarus increased by a factor of 4.4, while e.g. access to the Astrophysical Journal "only" increased by a factor of 1.8.

  5. Phenotypic robustness can increase phenotypic variability after non-genetic perturbations in gene regulatory circuits

    Espinosa-Soto, C.; Martin, O. C.; Wagner, A

    2010-01-01

    Non-genetic perturbations, such as environmental change or developmental noise, can induce novel phenotypes. If an induced phenotype confers a fitness advantage, selection may promote its genetic stabilization. Non-genetic perturbations can thus initiate evolutionary innovation. Genetic variation that is not usually phenotypically visible may play an important role in this process. Populations under stabilizing selection on a phenotype that is robust to mutations can accumulate such variation...

  6. Android Access Control Extension

    Anton Baláž; Branislav Madoš; Michal Ambróz

    2015-01-01

    The main objective of this work is to analyze and extend security model of mobile devices running on Android OS. Provided security extension is a Linux kernel security module that allows the system administrator to restrict program's capabilities with per-program profiles. Profiles can allow capabilities like network access, raw socket access, and the permission to read, write, or execute files on matching paths. Module supplements the traditional Android capability access control model by pr...

  7. Usability and accessibility curricula

    Luján Mora, Sergio; Cachero Castro, Cristina

    2012-01-01

    Presentation of existing curricula connected with usability and accessibility at the University of Alicante for the Leonardo da Vinci project "GUI Usability and Accessibility: Exchanging Knowledge and Experiences" (Grenoble, France, 27 November 2012). Presentación del currículo actual relacionado con la usabilidad y la accesibilidad en la Universidad de Alicante para el proyecto Leonardo da Vinci "GUI Usability and Accessibility: Exchanging Knowledge and Experiences" (Grenoble, Francia, 27...

  8. Open Access and SSHRC

    Sylvain, Christian

    2007-01-01

    The presenter, Christian Sylvain, is the Director, Policy, Planning, and International Affairs of Canada's Social Sciences and Humanities Research Council (SSHRC), the primary funding agency for social sciences and humanities research in Canada. This session presents an overview of open access at SSHRC, beginning with the endorsement of the concept of open access by SSHRC Council in 2004. The objective is to remove barriers to access to publicly funded research, so as to increase circulatio...

  9. Accessibility to dental services

    Evenden, Craig Andrew

    2007-01-01

    Background: Access to dental care has become a key focus for Government officials in Scotland. Newton et al. (2004) note that the White Paper ‘Towards a healthier Scotland’ (The Scottish Office Department of Health, 1999), identifies dental health as a key area for action, with large numbers of the population unable to gain access to dental care. Various methodologies have been developed in an attempt to explore the inequalities in dental health care access; however a number of studies have ...

  10. Open Access in Practice

    Machovec, George; Morrison, Heather; Whitehead, Heather

    2006-01-01

    This session addressed some of the practical issues arising from open access. The Colorado Alliance of Research Libraries (CARL) links members with open access resources through the Gold Rush service, which includes 80 open access title lists. Librarians at the Colorado School of Mines have collaborated to develop a subject specialized list of titles - for their own library, and to share with all CARL members through Gold Rush. E-LIS, the Open Archive for Library and Information Studies...

  11. The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data

    Kohler, S.; Doelken, S.C.; Mungall, C.J.; Bauer, S.; Firth, H.V.; Bailleul-Forestier, I.; Black, G.C.M.; Brown, D.L.; Brudno, M.; Campbell, J.; FitzPatrick, D.R.; Eppig, J.T.; Jackson, A.P.; Freson, K.; Girdea, M.; Helbig, I.; Hurst, J.A.; Jahn, J.; Jackson, L.G.; Kelly, A.M.; Ledbetter, D.H.; Mansour, S.; Martin, C.L.; Moss, C.; Mumford, A.; Ouwehand, W.H.; Park, S.M.; Riggs, E.R.; Scott, R.H.; Sisodiya, S.; Vooren, S. van der; Wapner, R.J.; Wilkie, A.O.; Wright, C.F.; Silfhout, A.T. van; Leeuw, N. de; Vries, B. de; Washingthon, N.L.; Smith, C.L.; Westerfield, M.; Schofield, P.; Ruef, B.J.; Gkoutos, G.V.; Haendel, M.; Smedley, D.; Lewis, S.E.; Robinson, P.N.

    2014-01-01

    The Human Phenotype Ontology (HPO) project, available at http://www.human-phenotype-ontology.org, provides a structured, comprehensive and well-defined set of 10,088 classes (terms) describing human phenotypic abnormalities and 13,326 subclass relations between the HPO classes. In addition we have d

  12. Access 2013 bible

    Alexander, Michael

    2013-01-01

    A comprehensive reference to the updated and new features of Access 2013 As the world's most popular database management tool, Access enables you to organize, present, analyze, and share data as well as build powerful database solutions. However, databases can be complex. That's why you need the expert guidance in this comprehensive reference. Access 2013 Bible helps you gain a solid understanding of database purpose, construction, and application so that whether you're new to Access or looking to upgrade to the 2013 version, this well-rounded resource provides you with a th

  13. Demystifying Open Access

    The tenets of Open Access are to grant anyone, anywhere and anytime free access to the results of scientific research. HEP spearheaded the Open Access dissemination of scientific results with the mass mailing of preprints in the pre-WWW era and with the launch of the arXiv preprint system at the dawn of the '90s. The HEP community is now ready for a further push to Open Access while retaining all the advantages of the peer-review system and, at the same time, bring the spiralling cost of journal subscriptions under control. I will present a possible plan for the conversion to Open Access of HEP peer-reviewed journals, through a consortium of HEP funding agencies, laboratories and libraries: SCOAP3 (Sponsoring Consortium for Open Access Publishing in Particle Physics). SCOAP3 will engage with scientific publishers towards building a sustainable model for Open Access publishing, which is as transparent as possible for HEP authors. The current system in which journals income comes from subscription fees is replaced with a scheme where SCOAP3 compensates publishers for the costs incurred to organise the peer-review service and give Open Access to the final version of articles. SCOAP3 will be funded by all countries active in HEP under a 'fair share' scenario, according to their production of HEP articles. In this talk I will present a short overview of the history of Open Access in HEP, the details of the SCOAP3 model and the outlook for its implementation.

  14. OGIS Access System

    National Archives and Records Administration — The OGIS Access System (OAS) provides case management, stakeholder collaboration, and public communications activities including a web presence via a web portal.

  15. The Cognitive Phenotype of Spina Bifida Meningomyelocele

    Dennis, Maureen; Barnes, Marcia A.

    2010-01-01

    A cognitive phenotype is a product of both assets and deficits that specifies what individuals with spina bifida meningomyelocele (SBM) can and cannot do and why they can or cannot do it. In this article, we review the cognitive phenotype of SBM and describe the processing assets and deficits that cut within and across content domains, sensory…

  16. Distribution of phenotypes among Bacillus thuringiensis strains

    An extensive collection of Bacillus thuringiensis isolates from around the world were phenotypically profiled using standard biochemical tests. Six phenotypic traits occurred in 20-86% of the isolates and were useful in distinguishing isolates: production of urease (U; 20.5% of isolates), hydrolysis...

  17. Tag-mediated cooperation with non-deterministic genotype-phenotype mapping

    Zhang, Hong; Chen, Shu

    2016-01-01

    Tag-mediated cooperation provides a helpful framework for resolving evolutionary social dilemmas. However, most of the previous studies have not taken into account genotype-phenotype distinction in tags, which may play an important role in the process of evolution. To take this into consideration, we introduce non-deterministic genotype-phenotype mapping into a tag-based model with spatial prisoner's dilemma. By our definition, the similarity between genotypic tags does not directly imply the similarity between phenotypic tags. We find that the non-deterministic mapping from genotypic tag to phenotypic tag has non-trivial effects on tag-mediated cooperation. Although we observe that high levels of cooperation can be established under a wide variety of conditions especially when the decisiveness is moderate, the uncertainty in the determination of phenotypic tags may have a detrimental effect on the tag mechanism by disturbing the homophilic interaction structure which can explain the promotion of cooperation in tag systems. Furthermore, the non-deterministic mapping may undermine the robustness of the tag mechanism with respect to various factors such as the structure of the tag space and the tag flexibility. This observation warns us about the danger of applying the classical tag-based models to the analysis of empirical phenomena if genotype-phenotype distinction is significant in real world. Non-deterministic genotype-phenotype mapping thus provides a new perspective to the understanding of tag-mediated cooperation.

  18. Expansive Phenotypic Landscape of Botrytis cinerea Shows Differential Contribution of Genetic Diversity and Plasticity.

    Corwin, Jason A; Subedy, Anushriya; Eshbaugh, Robert; Kliebenstein, Daniel J

    2016-04-01

    The modern evolutionary synthesis suggests that both environmental variation and genetic diversity are critical determinants of pathogen success. However, the relative contribution of these two sources of variation is not routinely measured. To estimate the relative contribution of plasticity and genetic diversity for virulence-associated phenotypes in a generalist plant pathogen, we grew a population of 15 isolates of Botrytis cinerea from throughout the world, under a variety of in vitro and in planta conditions. Under in planta conditions, phenotypic differences between the isolates were determined by the combination of genotypic variation within the pathogen and environmental variation. In contrast, phenotypic differences between the isolates under in vitro conditions were predominantly determined by genetic variation in the pathogen. Using a correlation network approach, we link the phenotypic variation under in vitro experimental conditions to phenotypic variation during plant infection. This study indicates that there is a high level of phenotypic variation within B. cinerea that is controlled by a mixture of genetic variation, environment, and genotype × environment. This argues that future experiments into the pathogenicity of B. cinerea must account for the genetic and environmental variation within the pathogen to better sample the potential phenotypic space of the pathogen. PMID:26828401

  19. Metabolomic phenotyping of af cloned pig model

    Clausen, Morten Rahr; Christensen, Kirstine Lykke; Hedemann, Mette Skou;

    2011-01-01

    Background Pigs are widely used as models for human physiological changes in intervention studies, because of the close resemblance between human and porcine physiology and the high degree of experimental control when using an animal model. Cloned animals have, in principle, identical genotypes and...... possibly also phenotypes and this offer an extra level of experimental control which could possibly make them a desirable tool for intervention studies. Therefore, in the present study, we address how phenotype and phenotypic variation is affected by cloning, through comparison of cloned pigs and normal...... outbred pigs. Results The metabolic phenotype of cloned pigs (n = 5) was for the first time elucidated by nuclear magnetic resonance (NMR)-based metabolomic analysis of multiple bio-fluids including plasma, bile and urine. The metabolic phenotype of the cloned pigs was compared with normal outbred pigs (n...

  20. Adjusting phenotypes by noise control.

    Kyung H Kim

    2012-01-01

    Full Text Available Genetically identical cells can show phenotypic variability. This is often caused by stochastic events that originate from randomness in biochemical processes involving in gene expression and other extrinsic cellular processes. From an engineering perspective, there have been efforts focused on theory and experiments to control noise levels by perturbing and replacing gene network components. However, systematic methods for noise control are lacking mainly due to the intractable mathematical structure of noise propagation through reaction networks. Here, we provide a numerical analysis method by quantifying the parametric sensitivity of noise characteristics at the level of the linear noise approximation. Our analysis is readily applicable to various types of noise control and to different types of system; for example, we can orthogonally control the mean and noise levels and can control system dynamics such as noisy oscillations. As an illustration we applied our method to HIV and yeast gene expression systems and metabolic networks. The oscillatory signal control was applied to p53 oscillations from DNA damage. Furthermore, we showed that the efficiency of orthogonal control can be enhanced by applying extrinsic noise and feedback. Our noise control analysis can be applied to any stochastic model belonging to continuous time Markovian systems such as biological and chemical reaction systems, and even computer and social networks. We anticipate the proposed analysis to be a useful tool for designing and controlling synthetic gene networks.

  1. Enabling Access to Digital Media for the Profoundly Disabled Project

    National Aeronautics and Space Administration — The system proposed in this effort will allow the handicapped individual with hand/arm motor impairment to use the computer and access digital libraries on the...

  2. Enhancing Access to Scientific Models through Standard Web Services Project

    National Aeronautics and Space Administration — We propose to investigate the feasibility and value of the "Software as a Service" paradigm in facilitating access to Earth Science numerical models. We...

  3. Facilitating Full-text Access to Biomedical Literature Using Open Access Resources.

    Kang, Hongyu; Hou, Zhen; Li, Jiao

    2015-01-01

    Open access (OA) resources and local libraries often have their own literature databases, especially in the field of biomedicine. We have developed a method of linking a local library to a biomedical OA resource facilitating researchers' full-text article access. The method uses a model based on vector space to measure similarities between two articles in local library and OA resources. The method achieved an F-score of 99.61%. This method of article linkage and mapping between local library and OA resources is available for use. Through this work, we have improved the full-text access of the biomedical OA resources. PMID:26262422

  4. Mathematics & database (open) access

    Guillopé, Laurent

    2003-01-01

    The textual version of this presentation at the Conference "Open Access to Scientific and Technical Information: State of the Art and Future Trends" was published with the title 'Mathematics and databases: Open Access' in "Information Services and Use", vol. 23 (2003), issue 2-3, p. 127-131.

  5. Market Access and Welfare

    Raimondos-Møller, Pascalis; Woodland, Alan D.

    2015-01-01

    Well known tariff reform rules that are guaranteed to increase welfare will not necessarily increase market access, while rules that are guaranteed to increase market access will not necessarily increase welfare. The present paper proposes a new set of tariff reforms that can achieve both...

  6. The Open Access Divide

    Jingfeng Xia

    2013-10-01

    Full Text Available This paper is an attempt to review various aspects of the open access divide regarding the difference between those academics who support free sharing of data and scholarly output and those academics who do not. It provides a structured description by adopting the Ws doctrines emphasizing such questions as who, what, when, where and why for information-gathering. Using measurable variables to define a common expression of the open access divide, this study collects aggregated data from existing open access as well as non-open access publications including journal articles and extensive reports. The definition of the open access divide is integrated into the discussion of scholarship on a larger scale.

  7. Evaluation of semantic-based information retrieval methods in the autism phenotype domain.

    Hassanpour, Saeed; O'Connor, Martin J; Das, Amar K

    2011-01-01

    Biomedical ontologies are increasingly being used to improve information retrieval methods. In this paper, we present a novel information retrieval approach that exploits knowledge specified by the Semantic Web ontology and rule languages OWL and SWRL. We evaluate our approach using an autism ontology that has 156 SWRL rules defining 145 autism phenotypes. Our approach uses a vector space model to correlate how well these phenotypes relate to the publications used to define them. We compare a vector space phenotype representation using class hierarchies with one that extends this method to incorporate additional semantics encoded in SWRL rules. From a PubMed-extracted corpus of 75 articles, we show that average rank of a related paper using the class hierarchy method is 4.6 whereas the average rank using the extended rule-based method is 3.3. Our results indicate that incorporating rule-based definitions in information retrieval methods can improve search for relevant publications. PMID:22195112

  8. PHENOTYPIC TRAITS IN ZAGORJE TURKEY

    Z. Janječić

    2007-06-01

    Full Text Available Production of turkeys in the region of Hrvatsko zagorje began in second half of 16th century, when there was a little influence of other turkey breeds from other region. Recently, interest for protection and preservation of autochthonous poultry breeds in Croatia is growing and in that sense this investigation was set to determine the phenotypic traits of Zagorje turkey. One hundred 10-month old turkeys (5 males and 20 females of four strains (bronze, black, grey and pale were measured, while egg production data were collected by a poll among the breeders. Average body weight of bronze, black, grey and pale strain males were 7.08, 6.88, 6.10 and 6.09 kg, respectively, while in females the average values were 4.02, 4.07, 3.63, and 3.68 kg. Generally, according to body measures of male birds, other than body weight, of all of the strains of Zagorje turkey, the black one is the biggest, as it had the highest values for body length, length of sternum, length of drumstick, length of shank, depth of chest and head measures. At the same time, the bronze strain had the highest value for carcass width. Body measures mentioned previously were not so different in females. Number of reared chicks was lowest in the pale strain. From the body measures assessed it is possible to conclude that Zagorje turkeys are rather uniform within the strain but differences in most of the breed traits are present between the strains, especially in males of bronze and black strain, when compared to gray and pale strain.

  9. Metabolomic phenotyping of a cloned pig model

    Callesen Henrik

    2011-08-01

    Full Text Available Abstract Background Pigs are widely used as models for human physiological changes in intervention studies, because of the close resemblance between human and porcine physiology and the high degree of experimental control when using an animal model. Cloned animals have, in principle, identical genotypes and possibly also phenotypes and this offer an extra level of experimental control which could possibly make them a desirable tool for intervention studies. Therefore, in the present study, we address how phenotype and phenotypic variation is affected by cloning, through comparison of cloned pigs and normal outbred pigs. Results The metabolic phenotype of cloned pigs (n = 5 was for the first time elucidated by nuclear magnetic resonance (NMR-based metabolomic analysis of multiple bio-fluids including plasma, bile and urine. The metabolic phenotype of the cloned pigs was compared with normal outbred pigs (n = 6 by multivariate data analysis, which revealed differences in the metabolic phenotypes. Plasma lactate was higher for cloned vs control pigs, while multiple metabolites were altered in the bile. However a lower inter-individual variability for cloned pigs compared with control pigs could not be established. Conclusions From the present study we conclude that cloned and normal outbred pigs are phenotypically different. However, it cannot be concluded that the use of cloned animals will reduce the inter-individual variation in intervention studies, though this is based on a limited number of animals.

  10. An end to endless forms: epistasis, phenotype distribution bias, and nonuniform evolution.

    Elhanan Borenstein

    2008-10-01

    Full Text Available Studies of the evolution of development characterize the way in which gene regulatory dynamics during ontogeny constructs and channels phenotypic variation. These studies have identified a number of evolutionary regularities: (1 phenotypes occupy only a small subspace of possible phenotypes, (2 the influence of mutation is not uniform and is often canalized, and (3 a great deal of morphological variation evolved early in the history of multicellular life. An important implication of these studies is that diversity is largely the outcome of the evolution of gene regulation rather than the emergence of new, structural genes. Using a simple model that considers a generic property of developmental maps-the interaction between multiple genetic elements and the nonlinearity of gene interaction in shaping phenotypic traits-we are able to recover many of these empirical regularities. We show that visible phenotypes represent only a small fraction of possibilities. Epistasis ensures that phenotypes are highly clustered in morphospace and that the most frequent phenotypes are the most similar. We perform phylogenetic analyses on an evolving, developmental model and find that species become more alike through time, whereas higher-level grades have a tendency to diverge. Ancestral phenotypes, produced by early developmental programs with a low level of gene interaction, are found to span a significantly greater volume of the total phenotypic space than derived taxa. We suggest that early and late evolution have a different character that we classify into micro- and macroevolutionary configurations. These findings complement the view of development as a key component in the production of endless forms and highlight the crucial role of development in constraining biotic diversity and evolutionary trajectories.

  11. Pediatric vascular access

    Pediatric interventional radiologists are ideally suited to provide vascular access services to children because of inherent safety advantages and higher success from using image-guided techniques. The performance of vascular access procedures has become routine at many adult interventional radiology practices, but this service is not as widely developed at pediatric institutions. Although interventional radiologists at some children's hospitals offer full-service vascular access, there is little or none at others. Developing and maintaining a pediatric vascular access service is a challenge. Interventionalists skilled in performing such procedures are limited at pediatric institutions, and institutional support from clerical staff, nursing staff, and technologists might not be sufficiently available to fulfill the needs of such a service. There must also be a strong commitment by all members of the team to support such a demanding service. There is a slippery slope of expected services that becomes steeper and steeper as the vascular access service grows. This review is intended primarily as general education for pediatric radiologists learning vascular access techniques. Additionally, the pediatric or adult interventional radiologist seeking to expand services might find helpful tips. The article also provides education for the diagnostic radiologist who routinely interprets radiographs containing vascular access devices. (orig.)

  12. Pediatric vascular access

    Donaldson, James S. [Northwestern University, Feinberg School of Medicine, Department of Medical Imaging, Children' s Memorial Hospital, Chicago, IL (United States)

    2006-05-15

    Pediatric interventional radiologists are ideally suited to provide vascular access services to children because of inherent safety advantages and higher success from using image-guided techniques. The performance of vascular access procedures has become routine at many adult interventional radiology practices, but this service is not as widely developed at pediatric institutions. Although interventional radiologists at some children's hospitals offer full-service vascular access, there is little or none at others. Developing and maintaining a pediatric vascular access service is a challenge. Interventionalists skilled in performing such procedures are limited at pediatric institutions, and institutional support from clerical staff, nursing staff, and technologists might not be sufficiently available to fulfill the needs of such a service. There must also be a strong commitment by all members of the team to support such a demanding service. There is a slippery slope of expected services that becomes steeper and steeper as the vascular access service grows. This review is intended primarily as general education for pediatric radiologists learning vascular access techniques. Additionally, the pediatric or adult interventional radiologist seeking to expand services might find helpful tips. The article also provides education for the diagnostic radiologist who routinely interprets radiographs containing vascular access devices. (orig.)

  13. Corporate Remote Access

    Eronen, Erpo

    2009-01-01

    The objective of this thesis was to find a suitable, cost efficient and easy-to-use secure remote access solution for the Andritz Group. Currently these secure re-mote connections are provided using Check Point IPsec VPN connections. How-ever, there is a need for more precise access restriction and a cut in management costs. Because of these reasons Andritz Group piloted products of the Juniper Networks Secure Access series. Secondary reasons for choosing Juniper SSL VPN were the market leadi...

  14. Open Access Italia 2010

    De Robbio, Antonella

    2010-01-01

    The presentation is an update of the state of the art of Open Access in Italy which was illustrated during the 2009 Open Access Week. It covers the milestones of Open Access in Italy and the recommendations of the CRUI national Working Group that has recently reached the number of 60 members. It illustrates the CRUI WG agenda for the next three years which focuses on the following three issues: open courseware, open archive metadata, and a survey of the attitudes of Italian publishers toward...

  15. Access 2010 for dummies

    Ulrich Fuller, Laurie

    2010-01-01

    A friendly, step-by-step guide to the Microsoft Office database application Access may be the least understood and most challenging application in the Microsoft Office suite. This guide is designed to help anyone who lacks experience in creating and managing a database learn to use Access 2010 quickly and easily. In the classic For Dummies tradition, the book provides an education in Access, the interface, and the architecture of a database. It explains the process of building a database, linking information, sharing data, generating reports, and much more.As the Micr

  16. Light and Space Through Photography

    Paz Morales, Antonio

    2014-01-01

    Photography now days challenge our perception of space, light, and architecture. Photography has challenge the way we perceive, interact and communicate in the world. In today society photography has find ways to communicate faster through images. Technology has played a big part on how we exchange pictures making it very accessible to all ages and cultures. As photography has become more accessible and it has become more technological advance, new challenges and problems have emerge. I consi...

  17. Phenotypic Diversity of Farmers’ Traditional Rice Varieties in the Philippines

    Roel C. Rabara

    2014-05-01

    Full Text Available Traditional rice varieties maintained and cultivated by farmers are likely sources of germplasm for breeding new rice varieties. They possess traits potentially adaptable to a wide range of abiotic and biotic stresses. Characterization of these germplasms is essential in rice breeding and provides valued information on developing new rice cultivars. In this study, 307 traditional rice varieties newly conserved at the PhilRice genebank were characterized to assess their phenotypic diversity using 57 morphological traits. Using the standardized Shannon-Weaver diversity index, phenotypic diversity indices averaged at 0.73 and 0.45 for quantitative and qualitative traits, respectively. Correlation analyses among agro-morphological traits showed a high positive correlation in some traits such as culm number and panicle number, flag leaf width and leaf blade width, grain width and caryopsis width. Cluster analysis separated the different varieties into various groups. Principal component analysis (PCA showed that seven independent principal components accounted for 74.95% of the total variation. Component loadings for each principal component showed morphological characters, such as culm number, panicle number and caryopsis ratio that were among the phenotypic traits contributing positive projections in three principal components that explained 48% of variation. Analyses of results showed high diversity in major traits assessed in farmers’ rice varieties. Based on plant height and maturity, 11 accessions could be potential donor parents in a rice breeding program. Future collection trips and characterization studies would further enrich diversity, in particular traits low in diversity, such as anthocyanin coloration, awn presence, awn color, culm habit, panicle type and panicle branching.

  18. Metabolomic phenotyping of a cloned pig model

    Clausen, Morten Rahr; Christensen, Kirstine Lykke; Hedemann, Mette Skou;

    2011-01-01

    Background Pigs are widely used as models for human physiological changes in intervention studies, because of the close resemblance between human and porcine physiology and the high degree of experimental control when using an animal model. Cloned animals have, in principle, identical genotypes and...... established. Conclusions From the present study we conclude that cloned and normal outbred pigs are phenotypically different. However, it cannot be concluded that the use of cloned animals will reduce the inter-individual variation in intervention studies, though this is based on a limited number of animals....... possibly also phenotypes and this offer an extra level of experimental control which could possibly make them a desirable tool for intervention studies. Therefore, in the present study, we address how phenotype and phenotypic variation is affected by cloning, through comparison of cloned pigs and normal...

  19. Mining skeletal phenotype descriptions from scientific literature.

    Tudor Groza

    Full Text Available Phenotype descriptions are important for our understanding of genetics, as they enable the computation and analysis of a varied range of issues related to the genetic and developmental bases of correlated characters. The literature contains a wealth of such phenotype descriptions, usually reported as free-text entries, similar to typical clinical summaries. In this paper, we focus on creating and making available an annotated corpus of skeletal phenotype descriptions. In addition, we present and evaluate a hybrid Machine Learning approach for mining phenotype descriptions from free text. Our hybrid approach uses an ensemble of four classifiers and experiments with several aggregation techniques. The best scoring technique achieves an F-1 score of 71.52%, which is close to the state-of-the-art in other domains, where training data exists in abundance. Finally, we discuss the influence of the features chosen for the model on the overall performance of the method.

  20. Large phenotype jumps in biomolecular evolution

    Bardou, F

    2003-01-01

    By defining the phenotype of a biopolymer by its active three-dimensional shape, and its genotype by its primary sequence, we propose a model that predicts and characterizes the statistical distribution of a population of biopolymers with a specific phenotype, that originated from a given genotypic sequence by a single mutational event. Depending on the ratio g0 that characterizes the spread of potential energies of the mutated population with respect to temperature, three different statistical regimes have been identified. We suggest that biopolymers found in nature are in a critical regime with g0 in the range 1-6, corresponding to a broad, but not too broad, phenotypic distribution resembling a truncated Levy flight. Thus the biopolymer phenotype can be considerably modified in just a few mutations.

  1. Market Access and Welfare

    Raimondos-Møller, Pascalis; Woodland, Alan D.

    objectives of trade policy is problematic and calls for finding alternative tariff reform rules that can achieve both objectives at the same time. The present paper contributes to this aim by using a new set of tariff reforms that are based on local optimality. Using such reforms it is shown that market......According to the literature, well known tariff reform rules that are guaranteed to increase welfare will not necessarily increase market access, while rules that are guaranteed to increase market access will not necessarily increase welfare. Such conflict between welfare and market access...... access and consumer welfare will always be weakly compatible, in the sense that reforms based on each objective have the same signed effect on the other objective. For strong compatibility, whereby both objectives increase as a result of a locally optimal tariff reform, we derive both a necessary and...

  2. Random access photonic metamaterials

    Cencillo-Abad, P.; Ou, J.Y.; Valente, J.; Plum, E.; Zheludev, N.I.

    2015-01-01

    We demonstrate the first addressable reconfigurable photonic metamaterials thus enabling control over optical material properties with simultaneous spatial and temporal resolution. Potential applications of random access metadevices include active focusing, beam steering, dynamic transformation optics and video holography.

  3. Access/AML

    Department of Transportation — The AccessAML is a web-based internet single application designed to reduce the vulnerability associated with several accounts assinged to a single users. This is a...

  4. UK Open Access Policy Landscape

    Picarra, Mafalda

    2014-01-01

    Two distinct paths for open access are being promoted in UK open access policies: open access publishing (gold open access) by RCUK (Gold OA) and self-archiving (green open access) by HEFCE. This requires continuous and coordinated efforts to support universities, academic libraries and researchers in achieving compliance.

  5. GEE for GWAS using Longitudinal Phenotype Data

    Sitlani, Colleen M.; Rice, Kenneth M.; Lumley, Thomas; McKnight, Barbara; Cupples, L. Adrienne; Avery, Christy L; Noordam, Raymond; Stricker, Bruno H. C.; Whitsel, Eric A.; Psaty, Bruce M.

    2014-01-01

    Many longitudinal cohort studies have both genome-wide measures of genetic variation and repeated measures of phenotypes and environmental exposures. Genome-wide association study analyses have typically used only cross-sectional data to evaluate quantitative phenotypes and binary traits. Incorporation of repeated measures may increase power to detect associations, but also requires specialized analysis methods. Here we discuss one such method – generalized estimating equations...

  6. Next Generation Sequencing Demands Next Generation Phenotyping

    Hennekam, Raoul CM; Biesecker, Leslie G

    2012-01-01

    Next-Generation Sequencing (NGS) is the most powerful diagnostic tool since the roentgenogram. NGS will facilitate diagnosis on a massive scale –allowing interrogation of all genes in a single assay. It has been suggested that NGS will decrease the need for phenotyping in general, and medical geneticists in particular. We argue that NGS will shift focus and approach of phenotyping. We predict that NGS performed for diagnostic purposes will yield variants in several genes, and consequences of ...

  7. Phenotyping of robustness and milk quality

    Berry, D. P.; Mcparland, S.; Bastin, Catherine; Wall, E.; Gengler, Nicolas; Soyeurt, Hélène

    2013-01-01

    A phenotype describes the outcome of the interacting development between the genotype of an individual and its specific environment throughout life. Animal breeding currently exploits large data sets of phenotypic and pedigree information to estimate the genetic merit of animals. Here we describe rapid, low-cost phenomic tools for dairy cattle. We give particular emphasis to infrared spectroscopy of milk because the necessary spectral data are already routinely available on milk samples from ...

  8. Phenotypic spandrel: absolute discrimination and ligand antagonism

    François, Paul; Johnson, Kyle A.; Saunders, Laura N.

    2015-01-01

    We consider the general problem of absolute discrimination between categories of ligands irrespective of their concentration. An instance of this problem is immune discrimination between self and not-self. We connect this problem to biochemical adaptation, and establish that ligand antagonism - the ability of sub threshold ligands to negatively impact response - is a necessary consequence of absolute discrimination.Thus antagonism constitutes a "phenotypic spandrel": a phenotype existing as a...

  9. Important discoveries from analysing bacterial phenotypes

    Bochner, Barry R.; Giovannetti, Luciana; Viti, Carlo

    2008-01-01

    The ability to test hundreds to thousands of cellular phenotypes in a single experiment has opened up new avenues of investigation and exploration and led to important discoveries in very diverse applications of microbiological research and development. The information provided by global phenotyping is complementary to, and often more easily interpretable than information provided by global molecular analytical methods such as gene chips and proteomics. This report summarizes advances present...

  10. Bacteria under SOS evolve anticancer phenotypes

    Weitao Tao; Dallo Shatha F

    2010-01-01

    Abstract Background The anticancer drugs, such as DNA replication inhibitors, stimulate bacterial adhesion and induce the bacterial SOS response. As a variety of bacterial mutants can be generated during SOS, novel phenotypes are likely to be selected under the drug pressure. Presentation of the hypothesis Bacteria growing with cancer cells in the presence of the replication inhibitors undergo the SOS response and evolve advantageous phenotypes for the bacteria to invade the cancer cells in o...

  11. A Regulatory RNA Inducing Transgenerationally Inherited Phenotypes

    Jensen, Lea Møller

    variation in Arabidopsis enables different regulatory networks and mechanisms to shape the phenotypic characteristics. The thesis describes the identification of regulatory RNA encoded by an enzyme encoding gene. The RNA regulates by inducing transgenerationally inherited phenotypes. The function of the RNA...... is dependent on the genetic background illustrating that polymorphisms are found in either interactors or target genes of the RNA. Furthermore, the RNA provides a mechanistic link between accumulation of glucosinolate and onset of flowering....

  12. Phenex: Ontological Annotation of Phenotypic Diversity

    Balhoff, James P.; Dahdul, Wasila M; Kothari, Cartik R.; Lapp, Hilmar; John G. Lundberg; Mabee, Paula; Midford, Peter E.; Westerfield, Monte; Vision, Todd J

    2010-01-01

    Background Phenotypic differences among species have long been systematically itemized and described by biologists in the process of investigating phylogenetic relationships and trait evolution. Traditionally, these descriptions have been expressed in natural language within the context of individual journal publications or monographs. As such, this rich store of phenotype data has been largely unavailable for statistical and computational comparisons across studies or integration with other ...

  13. Atypical disease phenotypes in pediatric ulcerative colitis

    Levine, Arie; de Bie, Charlotte I; Turner, Dan; Cucchiara, Salvatore; Sladek, Malgorzata; Murphy, M Stephen; Escher, Johanna C; Pærregaard, Anders

    2013-01-01

    Definitive diagnosis of pediatric ulcerative colitis (UC) may be particularly challenging since isolated colitis with overlapping features is common in pediatric Crohn's disease (CD), while atypical phenotypes of UC are not uncommon. The Paris classification allows more accurate phenotyping of...... atypical inflammatory bowel disease (IBD) patients. Our aim was to identify the prevalence of atypical disease patterns in new-onset pediatric UC using the Paris classification....

  14. Dynamic Spectrum Access

    2011-01-01

    Software Defined Radio (SDR) and Cognitive Radio (CR) could be in all radio transmitters sometime in the future. This thesis gives information about both SDR and CR and how we could use these technologies to utilize the scarce resources of frequencies. The use of CR in Dynamic Spectrum Access Networks could be a possible solution, and this thesis will try to give as much information as possible to this challenge. Information about Dynamic Spectrum Access and different challenges with this tec...

  15. CERN access cards

    HR Department

    2007-01-01

    Holders of CERN access cards are reminded that the card is an official document. It is important to carry it with you at all times when you are on the site. This applies also to those on standby duty who are called out for emergency interventions. As announced in Weekly Bulletin 13/2006, any loss or theft of access cards must be declared to the competent external authorities.

  16. The universal access handbook

    Stephanidis, Constantine

    2009-01-01

    In recent years, the field of Universal Access has made significant progress in consolidating theoretical approaches, scientific methods and technologies, as well as in exploring new application domains. Increasingly, professionals in this rapidly maturing area require a comprehensive and multidisciplinary resource that addresses current principles, methods, and tools. Written by leading international authorities from academic, research, and industrial organizations and nonmarket institutions, The Universal Access Handbook covers the unfolding scientific, methodological, technological, and pol

  17. Access to physiotherapy services

    Partridge, C. J.

    1982-01-01

    A survey of community physiotherapy services operating within the National Health Service throughout England and Wales in 1980 showed a considerable increase in the availability of physiotherapy outside hospital, with 159 health districts (75 per cent) having some form of community physiotherapy. Additional information obtained about access by general practitioners to hospital physiotherapy departments showed that in 140 districts (66 per cent), some direct access was available.

  18. IMPROVING ACCESS TO DRUGS

    Max Joseph Herman

    2012-01-01

    Although essentially not all therapies need drug intervention, drugs is still an important components in health sector, either in preventive, curative, rehabilitative or promotion efforts. Hence the access to drugs is a main problem, either in international or national scale even to the smallest unit. The problem on access to drugs is very complicated and cannot be separated especially from pharmacy management problems; moreover in general from the overall lack of policy development and effec...

  19. Children's access to medicines

    Alkahtani, Saad Ahmed

    2013-01-01

    Access to health care for children is important. It is dependent on access to health professionals and also parental attitudes towards illness. Children have the right to receive medicines that are scientifically evaluated for both efficacy and safety. Counterfeit and substandard medicines unfortunately result in the death of many children worldwide. There have been particular problems with diethylene glycol which has been used as a solvent in counterfeit medicines. It has also been foun...

  20. Information Access Surveys (IAS)

    2004-01-01

    What is an Information Access Survey? An Information Access Survey is a tool that: • Identifies key issues about people and what information needs they have • Identifies what media sources are available, what strategies people use to get information and finds out how cost-effective these are • Recommends methods of communication that are useful for poor rural communities who use aquatic resources to improve their livelihoods (Pdf contains 4 pages).

  1. Open Access Research Impacts

    Das, Anup-Kumar

    2015-01-01

    In an open access (OA) world, much importance has been given to using open source tools, open access resources and open solutions to engage authors and researchers in collaborative research, peer-to-peer sharing of scholarly information and collaborative evaluation of scholars’ works. On the other hand, exponential growth of scientific literature also has led to rapid disappearance of nascent literature before it actually gets noticed by the scientific communities. No single database can capt...

  2. Phenotypic Evolution With and Beyond Genome Evolution.

    Félix, M-A

    2016-01-01

    DNA does not make phenotypes on its own. In this volume entitled "Genes and Phenotypic Evolution," the present review draws the attention on the process of phenotype construction-including development of multicellular organisms-and the multiple interactions and feedbacks between DNA, organism, and environment at various levels and timescales in the evolutionary process. First, during the construction of an individual's phenotype, DNA is recruited as a template for building blocks within the cellular context and may in addition be involved in dynamical feedback loops that depend on the environmental and organismal context. Second, in the production of phenotypic variation among individuals, stochastic, environmental, genetic, and parental sources of variation act jointly. While in controlled laboratory settings, various genetic and environmental factors can be tested one at a time or in various combinations, they cannot be separated in natural populations because the environment is not controlled and the genotype can rarely be replicated. Third, along generations, genotype and environment each have specific properties concerning the origin of their variation, the hereditary transmission of this variation, and the evolutionary feedbacks. Natural selection acts as a feedback from phenotype and environment to genotype. This review integrates recent results and concrete examples that illustrate these three points. Although some themes are shared with recent calls and claims to a new conceptual framework in evolutionary biology, the viewpoint presented here only means to add flesh to the standard evolutionary synthesis. PMID:27282029

  3. Advanced phenotyping and phenotype data analysis for the study of plant growth and development.

    Rahaman, Md Matiur; Chen, Dijun; Gillani, Zeeshan; Klukas, Christian; Chen, Ming

    2015-01-01

    Due to an increase in the consumption of food, feed, fuel and to meet global food security needs for the rapidly growing human population, there is a necessity to breed high yielding crops that can adapt to the future climate changes, particularly in developing countries. To solve these global challenges, novel approaches are required to identify quantitative phenotypes and to explain the genetic basis of agriculturally important traits. These advances will facilitate the screening of germplasm with high performance characteristics in resource-limited environments. Recently, plant phenomics has offered and integrated a suite of new technologies, and we are on a path to improve the description of complex plant phenotypes. High-throughput phenotyping platforms have also been developed that capture phenotype data from plants in a non-destructive manner. In this review, we discuss recent developments of high-throughput plant phenotyping infrastructure including imaging techniques and corresponding principles for phenotype data analysis. PMID:26322060

  4. Integrating Mouse Anatomy and Pathology Ontologies into a Phenotyping Database: Tools for Data Capture and Training

    Sundberg, John P.; Beth A. Sundberg; Schofield, Paul

    2008-01-01

    The Mouse Disease Information System (MoDIS) is a data capture system for pathology data from laboratory mice designed to support phenotyping studies. The system integrates the mouse anatomy (MA) and mouse pathology (MPATH) ontologies into a Microsoft Access database facilitating the coding of organ, tissue, and disease process to recognized semantic standards. Grading of disease severity provides scores for all lesions that can then be used for quantitative trait locus (QTL) analyses and hap...

  5. Bioinspired genotype–phenotype linkages: mimicking cellular compartmentalization for the engineering of functional proteins

    Van Vliet, Liisa D.; Colin, Pierre-Yves; Hollfelder, Florian

    2015-01-01

    The idea of compartmentalization of genotype and phenotype in cells is key for enabling Darwinian evolution. This contribution describes bioinspired systems that use in vitro compartments—water-in-oil droplets and gel-shell beads—for the directed evolution of functional proteins. Technologies based on these principles promise to provide easier access to protein-based therapeutics, reagents for processes involving enzyme catalysis, parts for synthetic biology and materials with biological comp...

  6. Topics in Banach space theory

    Albiac, Fernando

    2016-01-01

    This text provides the reader with the necessary technical tools and background to reach the frontiers of research without the introduction of too many extraneous concepts. Detailed and accessible proofs are included, as are a variety of exercises and problems. The two new chapters in this second edition are devoted to two topics of much current interest amongst functional analysts: Greedy approximation with respect to bases in Banach spaces and nonlinear geometry of Banach spaces. This new material is intended to present these two directions of research for their intrinsic importance within Banach space theory, and to motivate graduate students interested in learning more about them. This textbook assumes only a basic knowledge of functional analysis, giving the reader a self-contained overview of the ideas and techniques in the development of modern Banach space theory. Special emphasis is placed on the study of the classical Lebesgue spaces Lp (and their sequence space analogues) and spaces of continuous f...

  7. Moduli spaces of riemannian metrics

    Tuschmann, Wilderich

    2015-01-01

    This book studies certain spaces of Riemannian metrics on both compact and non-compact manifolds. These spaces are defined by various sign-based curvature conditions, with special attention paid to positive scalar curvature and non-negative sectional curvature, though we also consider positive Ricci and non-positive sectional curvature. If we form the quotient of such a space of metrics under the action of the diffeomorphism group (or possibly a subgroup) we obtain a moduli space. Understanding the topology of both the original space of metrics and the corresponding moduli space form the central theme of this book. For example, what can be said about the connectedness or the various homotopy groups of such spaces? We explore the major results in the area, but provide sufficient background so that a non-expert with a grounding in Riemannian geometry can access this growing area of research.

  8. The International Mouse Phenotyping Consortium: past and future perspectives on mouse phenotyping

    Steve D M Brown; Moore, Mark W.

    2012-01-01

    Determining the function of all mammalian genes remains a major challenge for the biomedical science community in the 21st century. The goal of the International Mouse Phenotyping Consortium (IMPC) over the next 10 years is to undertake broad-based phenotyping of 20,000 mouse genes, providing an unprecedented insight into mammalian gene function. This short article explores the drivers for large-scale mouse phenotyping and provides an overview of the aims and processes involved in IMPC mouse ...

  9. The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data

    Kohler, S.; Doelken, S.C.; Mungall, C.J.; Bauer, S.; Firth, H. V.; Bailleul-Forestier, I.; Black, G C M; Brown, D L; Brudno, M.; Campbell, J.; Fitzpatrick, D R; Eppig, J.T.; Jackson, A.P.; Freson, K.; Girdea, M.

    2014-01-01

    The Human Phenotype Ontology (HPO) project, available at http://www.human-phenotype-ontology.org, provides a structured, comprehensive and well-defined set of 10,088 classes (terms) describing human phenotypic abnormalities and 13,326 subclass relations between the HPO classes. In addition we have developed logical definitions for 46% of all HPO classes using terms from ontologies for anatomy, cell types, function, embryology, pathology and other domains. This allows interoperability with sev...

  10. Morphological phenotypic dispersion of garlic cultivars by cluster analysis and multidimensional scaling

    Anderson Rodrigo da Silva

    2014-02-01

    Full Text Available Multivariate techniques have become a useful tool for studying the phenotypic diversity of Germplasm Bank accessions, since they make it possible to combine a variety of different information from these accessions. This study aimed to characterize the phenotypic dispersion of garlic (Allium sativum L. using two multivariate techniques with different objective functions. Twenty accessions were morphologically characterized for bulb diameter, length, and weight; number of cloves per bulb; number of leaves per plant; and leaf area. Techniques based on generalized quadratic distance of Mahalanobis, UPGMA (Unweighted Pair Group Method with Arithmetic Mean clustering, and nMDS (nonmetrric MultiDimensional Scaling were applied and the relative importance of variables quantified. The two multivariate techniques were capable of identifying cultivars with different characteristics, mainly regarding their classification in subgroups of common garlic or noble garlic, according to the number of cloves per bulb. The representation of the phenotypic distance of cultivars by multidimensional scaling was slightly more effective than that with UPGMA clustering.

  11. Spare capacity and phenotypic flexibility in the digestive system of a migratory bird: defining the limits of animal design

    McWilliams, Scott R.; William H Karasov

    2014-01-01

    Flexible phenotypes enable animals to live in environments that change over space and time, and knowing the limits to and the required time scale for this flexibility provides insights into constraints on energy and nutrient intake, diet diversity and niche width. We quantified the level of immediate and ultimate spare capacity, and thus the extent of phenotypic flexibility, in the digestive system of a migratory bird in response to increased energy demand, and identified the digestive constr...

  12. Playground Accessibility and Neighbourhood Social Interaction among Parents

    Bennet, Scott A.; Yiannakoulias, Nikolaos; Williams, Allison M.; Kitchen, Peter

    2012-01-01

    While the positive association between social interaction and access to green space is well accepted, little research has sought to understand the role of children's playgrounds in facilitating social interaction within a community. Playgrounds are spaces designed to facilitate play and the interaction of children, but may also be important places…

  13. Random Access to Grammar-Compressed Strings and Trees

    Bille, Philip; Landau, Gad M.; Raman, Rajeev;

    2015-01-01

    representations of S achieving O(log N) random access time, and either O(n · αk(n)) construction time and space on the pointer machine model, or O(n) construction time and space on the RAM. Here, αk(n) is the inverse of the kth row of Ackermann's function. Our representations also efficiently support...

  14. Archives, Education, and Access: Learning at Interference Archive

    Bonnie Gordon

    2016-07-01

    Full Text Available Archives are a tool for education and the access policy of an archive affects what kind of education takes place in its space. In this paper, we describe how Interference Archive (IA, a community archive in Brooklyn, New York, provides access through an open stacks policy and experiential learning, which allows for unique educational opportunities. These methods of providing access are intended to subvert representational power, allowing visitors, donors, and volunteers to take part in deciding how histories are told, how materials are accessed, and how the collection is re-used as a resource for learning about contemporary and historical social movements.

  15. Open Access in the Sciences

    Morrison, Heather

    2009-01-01

    Open Access in the Sciences is an overview presentation designed for a library science class at McGill University, with a focus on open access in the Canadian context. There are more than 3,900 fully open access journals listed in the Directory of Open Access Journals; more than a hundred are published in Canada. Selected examples of open access journals from across the country are presented, published by universities / libraries, societies, and government. Open access archives (disciplina...

  16. IVOA Simple Image Access

    Dowler, Patrick; Bonnarel, François

    2016-01-01

    The Simple Image Access protocol (SIA) provides capabilities for the discovery, description, access, and retrieval of multi-dimensional image datasets, including 2-D images as well as datacubes of three or more dimensions. SIA data discovery is based on the ObsCore Data Model (ObsCoreDM), which primarily describes data products by the physical axes (spatial, spectral, time, and polarization). Image datasets with dimension greater than 2 are often referred to as datacubes, cube or image cube datasets and may be considered examples of hypercube or n-cube data. In this document the term "image" refers to general multi-dimensional datasets and is synonymous with these other terms unless the image dimensionality is otherwise specified. SIA provides capabilities for image discovery and access. Data discovery and metadata access (using ObsCoreDM) are defined here. The capabilities for drilling down to data files (and related resources) and services for remote access are defined elsewhere, but SIA also allows for dir...

  17. Space Basics

    Herbert, Dexter (Editor)

    1991-01-01

    In this education video series, 'Liftoff to Learning', astronauts (Bruce Melnick, Thomas Akers, William Shepherd, Robert Cabana, and Richard Richards) describe the historical beginnings of space exploration from the time of Robert H. Goddard (considered the Father of Rocketry), who, in 1929, invented the first propellant rocket, the prototype of modern liquid propellant rockets, up to the modern Space Shuttles. The questions - where is space, what is space, and how do astronauts get to, stay in, and come back from space are answered through historical footage, computer graphics, and animation. The space environment effects, temperature effects, and gravitational effects on the launching, orbiting, and descent of the Shuttles are discussed. Included is historical still photos and film footage of past space programs and space vehicles.

  18. Space Curves

    Peskine, Christian; Sernesi, Edoardo

    1987-01-01

    The main topics of the conference on "Curves in Projective Space" were good and bad families of projective curves, postulation of projective space curves and classical problems in enumerative geometry.

  19. Proposition of an Unexploited Multiple Access Technique

    Sidi Ahmed Djennas; Fethi Tarik Bendimerad

    2012-01-01

    Continual growth in number of telecommunication network users encourages engineers to bring solutions to avoid overload and conflict. The situation is remedied by multiple access techniques and protocols. In fact, several ideas were applied with success to overcome difficulties. Basically, these ideas are based on discrimination in time, frequency, space and modulating code or time management. Within the context, we propose in this paper a new technique which helps us to avoid the conflict be...

  20. Time : space.

    M Crang

    2005-01-01

    Spaces of Geographical Thought examines key ideas like space and place - which inform the geographic imagination. The text: discusses the core conceptual vocabulary of human geography: agency: structure; state: society; culture: economy; space: place; black: white; man: woman; nature: culture; local: global; and time: space; explains the significance of these binaries in the constitution of geographic thought; and shows how many of these binaries have been interrogated and re-imagined in more...

  1. Space Microbiology

    Horneck, Gerda; Klaus, David M.; Mancinelli, Rocco L.

    2010-01-01

    Summary: The responses of microorganisms (viruses, bacterial cells, bacterial and fungal spores, and lichens) to selected factors of space (microgravity, galactic cosmic radiation, solar UV radiation, and space vacuum) were determined in space and laboratory simulation experiments. In general, microorganisms tend to thrive in the space flight environment in terms of enhanced growth parameters and a demonstrated ability to proliferate in the presence of normally inhibitory levels of antibiotic...

  2. Migrants' access to healthcare

    Norredam, Marie

    2011-01-01

    access were used to explore differences: 1) cancer stage at diagnosis as a clinical outcome and 2) emergency room (ER) contacts as a utilisation measure. Both informal and formal barriers to access were studied to explore why possible differences existed including: 1) motivation for using ER; and 2......) asylum seekers' healthcare entitlements. Different definitions of migration and ethnicity were investigated including: country of birth and residence status. Substudy I showed a tendency towards more advanced stage at diagnosis or unknown stage among most subgroups of migrant women with a history of...... informal barriers to access and screening. According to the law asylum seekers are entitled to emergency care only in 10 out of 24 countries. Medical screening was carried out in all but one of the 24 EU countries; however, the content and extent of screening programmes vary. The thesis aimed to explore if...

  3. Nuclear information access system

    The energy supply in the countries, which have abundant energy resources, may not be affected by accepting the assertion of anti-nuclear and environment groups. Anti-nuclear movements in the countries which have little energy resources may cause serious problem in securing energy supply. Especially, it is distinct in Korea because she heavily depends on nuclear energy in electricity supply(nuclear share in total electricity supply is about 40%).The cause of social trouble surrounding nuclear energy is being involved with various circumstances. However, it is very important that we are not aware of the importance of information access and prepared for such a situation from the early stage of nuclear energy's development. In those matter, this paper analyzes the contents of nuclear information access system in France and Japan which have dynamic nuclear development program and presents the direction of the nuclear access regime through comparing Korean status and referring to progresses of the regime

  4. Complication with intraosseous access

    Hallas, Peter; Brabrand, Mikkel; Folkestad, Lars

    2013-01-01

    INTRODUCTION: Intraosseous access (IO) is indicated if vascular access cannot be quickly established during resuscitation. Complication rates are estimated to be low, based on small patient series, model or cadaver studies, and case reports. However, user experience with IO use in real......-life emergency situations might differ from the results in the controlled environment of model studies and small patient series. We performed a survey of IO use in real-life emergency situations to assess users' experiences of complications. METHODS: An online questionnaire was sent to Scandinavian emergency...... physicians, anesthesiologists and pediatricians. RESULTS: 1,802 clinical cases of IO use was reported by n=386 responders. Commonly reported complications with establishing IO access were patient discomfort/pain (7.1%), difficulties with penetration of periosteum with IO needle (10.3%), difficulties with...

  5. Serum Biochemical Phenotypes in the Domestic Dog

    Chang, Yu-Mei; Hadox, Erin; Szladovits, Balazs; Garden, Oliver A.

    2016-01-01

    The serum or plasma biochemical profile is essential in the diagnosis and monitoring of systemic disease in veterinary medicine, but current reference intervals typically take no account of breed-specific differences. Breed-specific hematological phenotypes have been documented in the domestic dog, but little has been published on serum biochemical phenotypes in this species. Serum biochemical profiles of dogs in which all measurements fell within the existing reference intervals were retrieved from a large veterinary database. Serum biochemical profiles from 3045 dogs were retrieved, of which 1495 had an accompanying normal glucose concentration. Sixty pure breeds plus a mixed breed control group were represented by at least 10 individuals. All analytes, except for sodium, chloride and glucose, showed variation with age. Total protein, globulin, potassium, chloride, creatinine, cholesterol, total bilirubin, ALT, CK, amylase, and lipase varied between sexes. Neutering status significantly impacted all analytes except albumin, sodium, calcium, urea, and glucose. Principal component analysis of serum biochemical data revealed 36 pure breeds with distinctive phenotypes. Furthermore, comparative analysis identified 23 breeds with significant differences from the mixed breed group in all biochemical analytes except urea and glucose. Eighteen breeds were identified by both principal component and comparative analysis. Tentative reference intervals were generated for breeds with a distinctive phenotype identified by comparative analysis and represented by at least 120 individuals. This is the first large-scale analysis of breed-specific serum biochemical phenotypes in the domestic dog and highlights potential genetic components of biochemical traits in this species. PMID:26919479

  6. Invasion strategies in clonal aquatic plants: Are phenotypic differences caused by phenotypic plasticity or local adaptation?

    Riis, Tenna; Lambertini, Carla; Olesen, Birgit;

    2010-01-01

    . Methods: Field populations with a large phenotypic variety were sampled in a range of lakes and streams with different chemical and physical properties. The phenotypic plasticity of the species before and after cultivation was studied in a common garden growth experiment, and the genetic diversity of...

  7. Disruption - Access cards service

    2014-01-01

    We would like to inform you that between 10 November and 15 December 2014, the access cards service in Building 55 will be disrupted, as the GS Department has decided to improve the facilities for users of this building. During the work, you will find the registration, biometric registration and dosimeter exchange services on the second floor of Building 55 and the vehicle sticker service on the ground floor along with the access cards service. We thank you for your understanding and apologise for any inconvenience caused.

  8. Open-Access-Suchmaschinen

    Nicolai, Thomas

    2009-01-01

    Open Access ist eine von Wissenschaftlern für Wissenschaftler gegründete Bewegung mit dem Interesse, einen kostenlosen und uneingeschränkten Zugang zu wissenschaftli-chen Forschungsbeiträgen über das Internet zu ermöglichen. Im Zuge dieser Entwicklung stellen Forschungsinstitutionen ihren Wissenschaftlern kostenlos Open-Access-Archive zur freien Veröffentlichung ihrer Forschungsbeiträge zur Verfügung. Dies hat in den vergangenen Jahren zu mehreren Millionen frei verfügbaren wissenschaftlichen...

  9. Sprawl and Accessibility

    Robert Bruegmann

    2008-07-01

    Full Text Available This essay argues that many of the assumptions that have been made about sprawl are misleading or just wrong. Nowhere has this been more the case than in debates about transportation and access. Because of this, it is not surprising that a good many of the policies advocated by proponents of Smart Growth would almost certainly lead to reduced mobility and impaired accessibility for a large part of the population. At very least, the debates over sprawl have pitted private vs. public transportation in a way that has contributed to serious underfunding of transportation infrastructure of all kinds.

  10. Accessibility | Smokefree.gov

    Smokefree.gov is committed to providing access to all individuals—disabled or not—who are seeking information on its Web sites. To provide this information, the smokefree.gov Web site has been designed to comply with Section 508 of the Rehabilitation Act (as amended). Section 508 requires that all individuals with disabilities (whether they are federal government employees or members of the general public) have access to and use of information and data comparable to that provided to individuals without disabilities, unless an undue burden would be imposed.

  11. Kinds of Access

    Overgaard, Morten; Sandberg, Kristian

    In experimental investigations of consciousness, participants are asked to reflect upon their own experiences by issuing reports about them in different ways. For this reason, a participant needs some access to the content of her own conscious experience in order to report. In such experiments, the...... there is not only a theoretical, but also an empirical difference between different methods of reporting. We hypothesise that differences in the sensitivity of different scales may reveal that different types of access are used to issue direct reports about experiences and metacognitive reports about...

  12. Operationally Responsive Space Launch for Space Situational Awareness Missions

    Freeman, T.

    The United States Space Situational Awareness capability continues to be a key element in obtaining and maintaining the high ground in space. Space Situational Awareness satellites are critical enablers for integrated air, ground and sea operations, and play an essential role in fighting and winning conflicts. The United States leads the world space community in spacecraft payload systems from the component level into spacecraft and in the development of constellations of spacecraft. This position is founded upon continued government investment in research and development in space technology, which is clearly reflected in the Space Situational Awareness capabilities and the longevity of these missions. In the area of launch systems that support Space Situational Awareness, despite the recent development of small launch vehicles, the United States launch capability is dominated by unresponsive and relatively expensive launchers in the Expandable, Expendable Launch Vehicles (EELV). The EELV systems require an average of six to eight months from positioning on the launch table until liftoff. Access to space requires maintaining a robust space transportation capability, founded on a rigorous industrial and technology base. To assure access to space, the United States directed Air Force Space Command to develop the capability for operationally responsive access to space and use of space to support national security, including the ability to provide critical space capabilities in the event of a failure of launch or on-orbit capabilities. Under the Air Force Policy Directive, the Air Force will establish, organize, employ, and sustain space forces necessary to execute the mission and functions assigned including rapid response to the National Command Authorities and the conduct of military operations across the spectrum of conflict. Air Force Space Command executes the majority of spacelift operations for DoD satellites and other government and commercial agencies. The

  13. Koszul spaces

    Berglund, Alexander

    2014-01-01

    We prove that a nilpotent space is both formal and coformal if and only if it is rationally homotopy equivalent to the derived spatial realization of a graded commutative Koszul algebra. We call such spaces Koszul spaces and show that the rational homotopy groups and the rational homology of...... iterated loop spaces of Koszul spaces can be computed by applying certain Koszul duality constructions to the cohomology algebra. - See more at: http://www.ams.org/journals/tran/2014-366-09/S0002-9947-2014-05935-7/#sthash.hc29cqck.dpuf...

  14. Ideal spaces

    Väth, Martin

    1997-01-01

    Ideal spaces are a very general class of normed spaces of measurable functions, which includes e.g. Lebesgue and Orlicz spaces. Their most important application is in functional analysis in the theory of (usual and partial) integral and integro-differential equations. The book is a rather complete and self-contained introduction into the general theory of ideal spaces. Some emphasis is put on spaces of vector-valued functions and on the constructive viewpoint of the theory (without the axiom of choice). The reader should have basic knowledge in functional analysis and measure theory.

  15. Migrants' access to healthcare.

    Norredam, Marie

    2011-10-01

    There are strong pragmatic and moral reasons for receiving societies to address access to healthcare for migrants. Receiving societies have a pragmatic interest in sustaining migrants' health to facilitate integration; they also have a moral obligation to ensure migrants' access to healthcare according to international human rights principles. The intention of this thesis is to increase the understanding of migrants' access to healthcare by exploring two study aims: 1) Are there differences in migrants' access to healthcare compared to that of non-migrants? (substudy I and II); and 2) Why are there possible differences in migrants' access to healthcare compared to that of non-migrants? (substudy III and IV). The thesis builds on different methodological approaches using both register-based retrospective cohort design, cross-sectional design and survey methods. Two different measures of access were used to explore differences: 1) cancer stage at diagnosis as a clinical outcome and 2) emergency room (ER) contacts as a utilisation measure. Both informal and formal barriers to access were studied to explore why possible differences existed including: 1) motivation for using ER; and 2) asylum seekers' healthcare entitlements. Different definitions of migration and ethnicity were investigated including: country of birth and residence status. Substudy I showed a tendency towards more advanced stage at diagnosis or unknown stage among most subgroups of migrant women with a history of cancer compared to non-migrant women. Sub-study II found that some migrants (those born in Somalia, Turkey and Ex-Yugoslavia) use ER services more frequently than do non-migrants whereas others have the same or lower utilisation levels. As a consequence, substudy III was undertaken, which documented that more migrant within all subgroups had considered contacting a primary caregiver before visiting the ER compared to non-migrants, but that migrants experienced communication problems herein

  16. Phenotypic and genetic consequences of protein damage.

    Anita Krisko

    Full Text Available Although the genome contains all the information necessary for maintenance and perpetuation of life, it is the proteome that repairs, duplicates and expresses the genome and actually performs most cellular functions. Here we reveal strong phenotypes of physiological oxidative proteome damage at the functional and genomic levels. Genome-wide mutations rates and biosynthetic capacity were monitored in real time, in single Escherichia coli cells with identical levels of reactive oxygen species and oxidative DNA damage, but with different levels of irreversible oxidative proteome damage (carbonylation. Increased protein carbonylation correlates with a mutator phenotype, whereas reducing it below wild type level produces an anti-mutator phenotype identifying proteome damage as the leading cause of spontaneous mutations. Proteome oxidation elevates also UV-light induced mutagenesis and impairs cellular biosynthesis. In conclusion, protein damage reduces the efficacy and precision of vital cellular processes resulting in high mutation rates and functional degeneracy akin to cellular aging.

  17. Regulatory mechanisms link phenotypic plasticity to evolvability.

    van Gestel, Jordi; Weissing, Franz J

    2016-01-01

    Organisms have a remarkable capacity to respond to environmental change. They can either respond directly, by means of phenotypic plasticity, or they can slowly adapt through evolution. Yet, how phenotypic plasticity links to evolutionary adaptability is largely unknown. Current studies of plasticity tend to adopt a phenomenological reaction norm (RN) approach, which neglects the mechanisms underlying plasticity. Focusing on a concrete question - the optimal timing of bacterial sporulation - we here also consider a mechanistic approach, the evolution of a gene regulatory network (GRN) underlying plasticity. Using individual-based simulations, we compare the RN and GRN approach and find a number of striking differences. Most importantly, the GRN model results in a much higher diversity of responsive strategies than the RN model. We show that each of the evolved strategies is pre-adapted to a unique set of unseen environmental conditions. The regulatory mechanisms that control plasticity therefore critically link phenotypic plasticity to the adaptive potential of biological populations. PMID:27087393

  18. Constraints on the evolution of phenotypic plasticity

    Murren, Courtney J; Auld, Josh R.; Callahan, Hilary S;

    2015-01-01

    Phenotypic plasticity is ubiquitous and generally regarded as a key mechanism for enabling organisms to survive in the face of environmental change. Because no organism is infinitely or ideally plastic, theory suggests that there must be limits (for example, the lack of ability to produce an...... optimal trait) to the evolution of phenotypic plasticity, or that plasticity may have inherent significant costs. Yet numerous experimental studies have not detected widespread costs. Explicitly differentiating plasticity costs from phenotype costs, we re-evaluate fundamental questions of the limits to...... the evolution of plasticity and of generalists vs specialists. We advocate for the view that relaxed selection and variable selection intensities are likely more important constraints to the evolution of plasticity than the costs of plasticity. Some forms of plasticity, such as learning, may be...

  19. Delineating the GRIN1 phenotypic spectrum

    Lemke, Johannes R; Geider, Kirsten; Helbig, Katherine L; Heyne, Henrike O; Schütz, Hannah; Hentschel, Julia; Courage, Carolina; Depienne, Christel; Nava, Caroline; Heron, Delphine; Møller, Rikke S; Hjalgrim, Helle; Lal, Dennis; Neubauer, Bernd A; Nürnberg, Peter; Thiele, Holger; Kurlemann, Gerhard; Arnold, Georgianne L; Bhambhani, Vikas; Bartholdi, Deborah; Pedurupillay, Christeen Ramane J; Misceo, Doriana; Frengen, Eirik; Strømme, Petter; Dlugos, Dennis J; Doherty, Emily S; Bijlsma, Emilia K; Ruivenkamp, Claudia A; Hoffer, Mariette J V; Goldstein, Amy; Rajan, Deepa S; Narayanan, Vinodh; Ramsey, Keri; Belnap, Newell; Schrauwen, Isabelle; Richholt, Ryan; Koeleman, Bobby P C; Sá, Joaquim; Mendonça, Carla; de Kovel, Carolien G F; Weckhuysen, Sarah; Hardies, Katia; De Jonghe, Peter; De Meirleir, Linda; Milh, Mathieu; Badens, Catherine; Lebrun, Marine; Busa, Tiffany; Francannet, Christine; Piton, Amélie; Riesch, Erik; Biskup, Saskia; Vogt, Heinrich; Dorn, Thomas; Helbig, Ingo; Michaud, Jacques L; Laube, Bodo; Syrbe, Steffen

    2016-01-01

    OBJECTIVE: To determine the phenotypic spectrum caused by mutations in GRIN1 encoding the NMDA receptor subunit GluN1 and to investigate their underlying functional pathophysiology. METHODS: We collected molecular and clinical data from several diagnostic and research cohorts. Functional conseque......OBJECTIVE: To determine the phenotypic spectrum caused by mutations in GRIN1 encoding the NMDA receptor subunit GluN1 and to investigate their underlying functional pathophysiology. METHODS: We collected molecular and clinical data from several diagnostic and research cohorts. Functional...... impairment as well as oculomotor and movement disorders being discriminating phenotypic features. Loss of NMDA receptor function appears to be the underlying disease mechanism. The identification of both heterozygous and homozygous mutations blurs the borders of dominant and recessive inheritance of GRIN1...

  20. Rational elicitation of cold-sensitive phenotypes.

    Baliga, Chetana; Majhi, Sandipan; Mondal, Kajari; Bhattacharjee, Antara; VijayRaghavan, K; Varadarajan, Raghavan

    2016-05-01

    Cold-sensitive phenotypes have helped us understand macromolecular assembly and biological phenomena, yet few attempts have been made to understand the basis of cold sensitivity or to elicit it by design. We report a method for rational design of cold-sensitive phenotypes. The method involves generation of partial loss-of-function mutants, at either buried or functional sites, coupled with selective overexpression strategies. The only essential input is amino acid sequence, although available structural information can be used as well. The method has been used to elicit cold-sensitive mutants of a variety of proteins, both monomeric and dimeric, and in multiple organisms, namely Escherichia coli, Saccharomyces cerevisiae, and Drosophila melanogaster This simple, yet effective technique of inducing cold sensitivity eliminates the need for complex mutations and provides a plausible molecular mechanism for eliciting cold-sensitive phenotypes. PMID:27091994

  1. Relating L versus P to Reversal versus Access and Their Combinatorial Structures

    Ueno, Kenya

    Reversal complexity has been studied as a fundamental computational resource along with time and space complexity. We revisit it by contrasting with access complexity which we introduce in this study. First, we study the structure of space bounded reversal and access complexity classes. We characterize the complexity classes L, P and PSPACE in terms of space bounded reversal and access complexity classes. We also show that the difference between polynomial space bounded reversal and access complexity is related with the L versus P problem. Moreover, we introduce a theory of memory access patterns, which is an abstracted structure of the order of memory accesses during a random access computation, and extend the notion of reversal and access complexity for general random access computational models. Then, we give probabilistic analyses of reversal and access complexity for almost all memory access patterns. In particular, we prove that almost all memory access patterns have ω(log n) reversal complexity while all languages in L are computable within O(log n) reversal complexity.

  2. Design spaces

    2005-01-01

    Digital technologies and media are becoming increasingly embodied and entangled in the spaces and places at work and at home. However, our material environment is more than a geometric abstractions of space: it contains familiar places, social arenas for human action. For designers, the integration...... of digital technology with space poses new challenges that call for new approaches. Creative alternatives to traditional systems methodologies are called for when designers use digital media to create new possibilities for action in space. Design Spaces explores how design and media art can provide...... creative alternatives for integrating digital technology with space. Connecting practical design work with conceptual development and theorizing, art with technology, and usesr-centered methods with social sciences, Design Spaces provides a useful research paradigm for designing ubiquitous computing. This...

  3. Phenotypic approaches to drought in cassava: review.

    Okogbenin, Emmanuel; Setter, Tim L; Ferguson, Morag; Mutegi, Rose; Ceballos, Hernan; Olasanmi, Bunmi; Fregene, Martin

    2013-01-01

    Cassava is an important crop in Africa, Asia, Latin America, and the Caribbean. Cassava can be produced adequately in drought conditions making it the ideal food security crop in marginal environments. Although cassava can tolerate drought stress, it can be genetically improved to enhance productivity in such environments. Drought adaptation studies in over three decades in cassava have identified relevant mechanisms which have been explored in conventional breeding. Drought is a quantitative trait and its multigenic nature makes it very challenging to effectively manipulate and combine genes in breeding for rapid genetic gain and selection process. Cassava has a long growth cycle of 12-18 months which invariably contributes to a long breeding scheme for the crop. Modern breeding using advances in genomics and improved genotyping, is facilitating the dissection and genetic analysis of complex traits including drought tolerance, thus helping to better elucidate and understand the genetic basis of such traits. A beneficial goal of new innovative breeding strategies is to shorten the breeding cycle using minimized, efficient or fast phenotyping protocols. While high throughput genotyping have been achieved, this is rarely the case for phenotyping for drought adaptation. Some of the storage root phenotyping in cassava are often done very late in the evaluation cycle making selection process very slow. This paper highlights some modified traits suitable for early-growth phase phenotyping that may be used to reduce drought phenotyping cycle in cassava. Such modified traits can significantly complement the high throughput genotyping procedures to fast track breeding of improved drought tolerant varieties. The need for metabolite profiling, improved phenomics to take advantage of next generation sequencing technologies and high throughput phenotyping are basic steps for future direction to improve genetic gain and maximize speed for drought tolerance breeding. PMID

  4. Phenotypic Approaches to Drought in Cassava: Review

    Emmanuel eOkogbenin

    2013-05-01

    Full Text Available Cassava is an important crop in Africa, Asia, Latin America and the Caribbean. Cassava can be produced adequately in drought conditions making it the ideal food security crop in marginal environments. Although cassava can tolerate drought stress, it can be genetically improved to enhance productivity in such environments. Drought adaptation studies in over three decades in cassava have identified relevant mechanisms which have been explored in conventional breeding. Drought is a quantitative trait and its multigenic nature makes it very challenging to effectively manipulate and combine genes in breeding for rapid genetic gain and selection process. Cassava has a long growth cycle of 12 - 18 months which invariably contributes to a long breeding scheme for the crop. Modern breeding using advances in genomics and improved genotyping, is facilitating the dissection and genetic analysis of complex traits including drought tolerance, thus helping to better elucidate and understand the genetic basis of such traits. A beneficial goal of new innovative breeding strategies is to shorten the breeding cycle using minimized, efficient or fast phenotyping protocols. While high throughput genotyping have been achieved, this is rarely the case for phenotyping for drought adaptation. Some of the storage root phenotyping in cassava are often done very late in the evaluation cycle making selection process very slow. This paper highlights some modified traits suitable for early-growth phase phenotyping that may be used to reduce drought phenotyping cycle in cassava. Such modified traits can significantly complement the high throughput genotyping procedures to fast track breeding of improved drought tolerant varieties. The need for metabolite profiling, improved phenomics to take advantage of next generation sequencing technologies and high throughput phenotyping are basic steps for future direction to improve genetic gain and maximize speed for drought tolerance

  5. Digital Scholarship and Open Access

    Losoff, Barbara; Pence, Harry E.

    2010-01-01

    Open access publications provide scholars with unrestricted access to the "conversation" that is the basis for the advancement of knowledge. The large number of open access journals, archives, and depositories already in existence demonstrates the technical and economic viability of providing unrestricted access to the literature that is the…

  6. Analysis of Open Access Landscape

    Helen Doyle; Andy Gass; Debra Lappin; Rebecca Kennison

    2005-01-01

    This paper is created by bounding 5 editorials of Public Library of Science (PLoS ) which have written on various aspects of open access. It covers wide range topics of important open access issues, such as from paying for open access to copyright to open access as a public issue, which may be more or less of interest of our audience.

  7. Access to effective healthcare

    Høy, Bente

    2015-01-01

    Access to effective healthcare is in particular challenging for vulnerable and socially disadvantaged patients. Patients with chronic conditions are over-represented in these lower socioeconomic (LSES) groups. No generic review integrating the evidence on Self-Management support interventions in...

  8. Accessing vs Sourcing Knowledge

    Awate, Snehal; Larsen, Marcus M.; Mudambi, Ram

    2015-01-01

    to get on par with industry leaders. An in-depth comparison of knowledge flows reveals that within AMNEs, headquarters often serves the primary source of knowledge for R&D subsidiaries. In contrast, within EMNEs, headquarters accesses knowledge from R&D subsidiaries in advanced economies for...

  9. Access to telecommunications networks

    Canoy, M.F.M.; de Bijl, P.W.J.; Kemp, R.

    2003-01-01

    Contributing to a convergence of legal and economic approaches, The Economics of Antitrust and Regulation in Telecommunications integrates economic theory into current EU antitrust policy within the sector. The book addresses the role of competition and regulatory policies on a number of key issues in telecommunications, such as market definition, collective dominance, access to networks, and allocation of scarce resources.

  10. Greater needs, limited access

    2009-01-01

    With the recent ratification of the United Nations Convention on the Rights of Persons with Disabilities by the United Kingdom, Kathryn Senior reports that access to health care for people with mental health disorders is one area that leaves room for improvement.

  11. Open Access: Soziologische Aspekte

    Herb, Ulrich

    2007-01-01

    Die Forderung nach Open Access wird wissenschaftslogisch (Beschleunigung der wissenschaftlichen Kommunikation), finanziell (Linderung der Zeitschriftenkrise), sozial (Verringerung des Digital Divide), demokratietheoretisch (Zugang zu Informationen ermöglicht Partizipation) und sozialpolitisch (freier Zugang zu Informationen nivelliert Ungleichheiten) begründet. Dieser Beitrag untersucht einige dieser Annahmen mittels sozialwissenschaftlicher Modelle. Von Befunden aus der Bildungssoziologie un...

  12. Funding scientific open access

    In order to reduce the knowledge divide, more Open Access Journals (OAJ) are needed in all languages and scholarly subject areas that exercise peer-review or editorial quality control. To finance needed costs, it is discussed why and how to sell target specific advertisement by associating ads to given scientific keywords. (author)

  13. Kinds of access

    Overgaard, Morten; Sandberg, Kristian

    2012-01-01

    In experimental investigations of consciousness, participants are asked to reflect upon their own experiences by issuing reports about them in different ways. For this reason, a participant needs some access to the content of her own conscious experience in order to report. In such experiments, t...

  14. College Access Marketing

    Tremblay, Christopher W.

    2011-01-01

    College Access Marketing (CAM) is a relatively new phenomenon that seeks to positively influence the college-going rate. This report defines CAM, describes CAM examples, and discusses how CAM seeks to counter barriers to college. It explores four main elements of CAM: information, marketing, advocacy, and social mobilization. Further, it…

  15. Access as justice

    FITZPATRICK, Peter

    2005-01-01

    With the considerable help of Derrida, aptly aided by Mandela, this paper advances an idea of justice as integral to law. Thence, by way of an homology with such justice, access also is shown to be integral to law. What impels the overall argument is the primacy accorded to law in the constitution of the social bond.

  16. Strategies for Improving Access.

    Hore, Terry; Barwood, Bryan

    1989-01-01

    The development of the varied strategies that have been introduced in order to improve access for disadvantaged groups at Monash University is discussed. The Junior University Programme, the Monash Orientation Scheme for Aborigines, the Mature Age Special Admission Scheme, Special Entry Scheme, and the Schools Link Programme are described. (MLW)

  17. Efficient Distributed Medium Access

    Shah, Devavrat; Tetali, Prasad

    2011-01-01

    Consider a wireless network of n nodes represented by a graph G=(V, E) where an edge (i,j) models the fact that transmissions of i and j interfere with each other, i.e. simultaneous transmissions of i and j become unsuccessful. Hence it is required that at each time instance a set of non-interfering nodes (corresponding to an independent set in G) access the wireless medium. To utilize wireless resources efficiently, it is required to arbitrate the access of medium among interfering nodes properly. Moreover, to be of practical use, such a mechanism is required to be totally distributed as well as simple. As the main result of this paper, we provide such a medium access algorithm. It is randomized, totally distributed and simple: each node attempts to access medium at each time with probability that is a function of its local information. We establish efficiency of the algorithm by showing that the corresponding network Markov chain is positive recurrent as long as the demand imposed on the network can be supp...

  18. ACCESS Project: Final Report

    Weller, Heiko [Robert Bosch, LLC, Farmington Hills, MI (United States)

    2015-04-01

    The ACCESS project addressed the development, testing, and demonstration of the proposed advanced technologies and the associated emission and fuel economy improvement at an engine dynamometer and on a full-scale vehicle. Improve fuel economy by 25% with minimum performance penalties Achieve SULEV level emissions with gasoline Demonstrate multi-mode combustion engine management system

  19. Access2innovation

    Ravn, Jacob

    eksplicit haft fokus på at understøtte samarbejde mellem virksomhedere, forskere og NGOer som afsæt for at reducere fattigdomsproblematikkerne i udviklingslandene gennem en markedsdreven tilgang. Nærværende afhandling tager med udgangspunkt i studiet af access2innovation netværket (www.access2innovation.......com) fat i en flig af denne diskussion. Access2innovation har igennem et målrettet samarbejde mellem Folkekirkens Nødhjælp, virksomheder og forskere leveret en række konkrete kommercielle løsninger målrettet behovene i nødhjælps-­ og udviklingsbistanden. Netværket repræsenterer derved i praksis et...... succesfuldt eksempel på innovation i netværk ved at have lagt grunden for etablering af Sky Watch og ViewWorld og søsat yderligere to partnerskaber omkring Den Grønne Generator og WorldBarrow. Erfaringen fra access2innovation er dog samtidigt, at udvikling og implementering af samarbejdet har været...

  20. Access and Fishing Activities

    Høst, Jeppe Engset

    In this chapter, I look at the implications of transferable quotas on the organization of production; that is, how fishing activities are structured around access to the individual and transferable quotas and how, in turn, the quotas structure the production. Therefore, this chapter will give a d...

  1. Public Access Defibrillation

    Agerskov, Marianne; Nielsen, Anne Møller; Hansen, Carolina Malta;

    2015-01-01

    OHCA-cases where an accessible AED was located within 100 m. In addition, we assessed 30-day survival. METHODS: Using data from the Mobile Emergency Care Unit and the Danish Cardiac Arrest Registry, we identified 521 patients with OHCA between October 1, 2011 and September 31, 2013 in Copenhagen...

  2. Phenotypic plasticity can facilitate adaptive evolution in gene regulatory circuits

    Martin Olivier C; Espinosa-Soto Carlos; Wagner Andreas

    2011-01-01

    Abstract Background Many important evolutionary adaptations originate in the modification of gene regulatory circuits to produce new gene activity phenotypes. How do evolving populations sift through an astronomical number of circuits to find circuits with new adaptive phenotypes? The answer may often involve phenotypic plasticity. Phenotypic plasticity allows a genotype to produce different - alternative - phenotypes after non-genetic perturbations that include gene expression noise, environ...

  3. Phenotypic plasticity can facilitate adaptive evolution in gene regulatory circuits

    Espinosa-Soto, C.; Martin, O. C.; Wagner, A

    2011-01-01

    BACKGROUND: Many important evolutionary adaptations originate in the modification of gene regulatory circuits to produce new gene activity phenotypes. How do evolving populations sift through an astronomical number of circuits to find circuits with new adaptive phenotypes? The answer may often involve phenotypic plasticity. Phenotypic plasticity allows a genotype to produce different - alternative - phenotypes after non-genetic perturbations that include gene expression noise, environment...

  4. The ATS Web Page Provides "Tool Boxes" for: Access Opportunities, Performance, Interfaces, Volume, Environments, "Wish List" Entry and Educational Outreach

    1999-01-01

    This viewgraph presentation gives an overview of the Access to Space website, including information on the 'tool boxes' available on the website for access opportunities, performance, interfaces, volume, environments, 'wish list' entry, and educational outreach.

  5. Fixed Access Network Sharing

    Cornaglia, Bruno; Young, Gavin; Marchetta, Antonio

    2015-12-01

    Fixed broadband network deployments are moving inexorably to the use of Next Generation Access (NGA) technologies and architectures. These NGA deployments involve building fiber infrastructure increasingly closer to the customer in order to increase the proportion of fiber on the customer's access connection (Fibre-To-The-Home/Building/Door/Cabinet… i.e. FTTx). This increases the speed of services that can be sold and will be increasingly required to meet the demands of new generations of video services as we evolve from HDTV to "Ultra-HD TV" with 4k and 8k lines of video resolution. However, building fiber access networks is a costly endeavor. It requires significant capital in order to cover any significant geographic coverage. Hence many companies are forming partnerships and joint-ventures in order to share the NGA network construction costs. One form of such a partnership involves two companies agreeing to each build to cover a certain geographic area and then "cross-selling" NGA products to each other in order to access customers within their partner's footprint (NGA coverage area). This is tantamount to a bi-lateral wholesale partnership. The concept of Fixed Access Network Sharing (FANS) is to address the possibility of sharing infrastructure with a high degree of flexibility for all network operators involved. By providing greater configuration control over the NGA network infrastructure, the service provider has a greater ability to define the network and hence to define their product capabilities at the active layer. This gives the service provider partners greater product development autonomy plus the ability to differentiate from each other at the active network layer.

  6. Significance of Lewis Phenotyping Using Saliva and Gastric Tissue: Comparison with the Lewis Phenotype Inferred from Lewis and Secretor Genotypes

    Yun Ji Hong

    2014-01-01

    , and le59 alleles was 74.6%, 21.3%, 3.1%, and 1.0%, respectively, among 418 alleles. The saliva Lewis phenotype was completely consistent with the Lewis phenotype inferred from Lewis and Secretor genotypes, but that of gastric mucosa could not be predicted from genotypes. Lewis phenotyping using erythrocytes is only adequate for transfusion needs. Saliva testing for the Lewis phenotype is a more reliable method for determining the peripheral Lewis phenotype of an individual and the gastric Lewis phenotype must be used for the study on the association between Helicobacter pylori and the Lewis phenotype.

  7. Space Commercialization

    Martin, Gary L.

    2011-01-01

    A robust and competitive commercial space sector is vital to continued progress in space. The United States is committed to encouraging and facilitating the growth of a U.S. commercial space sector that supports U.S. needs, is globally competitive, and advances U.S. leadership in the generation of new markets and innovation-driven entrepreneurship. Energize competitive domestic industries to participate in global markets and advance the development of: satellite manufacturing; satellite-based services; space launch; terrestrial applications; and increased entrepreneurship. Purchase and use commercial space capabilities and services to the maximum practical extent Actively explore the use of inventive, nontraditional arrangements for acquiring commercial space goods and services to meet United States Government requirements, including measures such as public-private partnerships, . Refrain from conducting United States Government space activities that preclude, discourage, or compete with U.S. commercial space activities. Pursue potential opportunities for transferring routine, operational space functions to the commercial space sector where beneficial and cost-effective.

  8. Accessibility assessment in municipal schools of Uberaba, Minas Gerais state

    Victor Ruan Carvalho Soares

    2015-03-01

    Full Text Available Introduction: Architectural barriers generate difficulties, significantly impair people’s access to different environments, and limit accessibility. In the Brazilian public school system, these questions become more relevant when the process of school inclusion of students with special needs for mobility is analyzed. The process of school inclusion is intrinsically associated with the accessibility condition of schools. Through the ‘Accessible School Program‘, schools have received financial incentive to adapt their physical spaces according to accessibility. Objective: To describe the accessibility of the schools that have taken part in the ‘Accessible School Program’ in the municipality of Uberaba, Minas Gerais state. The study also aimed to identify the materials purchased and the adjustments and repairs implemented, evaluating whether the changes attend the technical standard of accessibility and agree with the recommended proposals. Methodology: This is an exploratory-descriptive study of quantitative nature; it was conducted in two phases through documental research and field study. Eleven municipal schools that participated in the ‘Accessible School Program’ were identified. Results: Most of the schools presented problems in almost all the items evaluated: sidewalks, common inside area, door squares, restrooms, locker rooms, swimming pools, parking, cinemas or theatres, auditoriums, stadiums, gymnasiums, concert halls, conference rooms and school furniture. Conclusion: The public schools evaluated present limitations regarding accessibility; the physical barriers erected in the past have not been eliminated and they still represent obstacles to be overcome by students with special needs.

  9. Space Nuclear Power Systems

    Houts, Michael G.

    2012-01-01

    Fission power and propulsion systems can enable exciting space exploration missions. These include bases on the moon and Mars; and the exploration, development, and utilization of the solar system. In the near-term, fission surface power systems could provide abundant, constant, cost-effective power anywhere on the surface of the Moon or Mars, independent of available sunlight. Affordable access to Mars, the asteroid belt, or other destinations could be provided by nuclear thermal rockets. In the further term, high performance fission power supplies could enable both extremely high power levels on planetary surfaces and fission electric propulsion vehicles for rapid, efficient cargo and crew transfer. Advanced fission propulsion systems could eventually allow routine access to the entire solar system. Fission systems could also enable the utilization of resources within the solar system.

  10. Observing photons in space a guide to experimental space astronomy

    Pauluhn, Anuschka; Culhane, J; Timothy, J; Wilhelm, Klaus; Zehnder, Alex

    2013-01-01

    An ideal resource for lecturers, this book provides a comprehensive review of experimental space astronomy. The number of astronomers whose knowledge and interest is concentrated on interpreting observations has grown substantially in the past decades; yet, the number of scientists who are familiar with and capable of dealing with instrumentation has dwindled.  All of the authors of this work are leading and experienced experts and practitioners who have designed, built, tested, calibrated, launched and operated advanced observing equipment for space astronomy. This book also contains concise information on the history of the field, supported by appropriate references. Moreover, scientists working in other fields will be able to get a quick overview of the salient issues of observing photons in any one of the various energy, wavelength and frequency ranges accessible in space. This book was written with the intention to make it accessible to advanced undergraduate and graduate students.

  11. Phenotype as Agent for Epigenetic Inheritance.

    Torday, John S; Miller, William B

    2016-01-01

    The conventional understanding of phenotype is as a derivative of descent with modification through Darwinian random mutation and natural selection. Recent research has revealed Lamarckian inheritance as a major transgenerational mechanism for environmental action on genomes whose extent is determined, in significant part, by germ line cells during meiosis and subsequent stages of embryological development. In consequence, the role of phenotype can productively be reconsidered. The possibility that phenotype is directed towards the effective acquisition of epigenetic marks in consistent reciprocation with the environment during the life cycle of an organism is explored. It is proposed that phenotype is an active agent in niche construction for the active acquisition of epigenetic marks as a dominant evolutionary mechanism rather than a consequence of Darwinian selection towards reproductive success. The reproductive phase of the life cycle can then be appraised as a robust framework in which epigenetic inheritance is entrained to affect growth and development in continued reciprocal responsiveness to environmental stresses. Furthermore, as first principles of physiology determine the limits of epigenetic inheritance, a coherent justification can thereby be provided for the obligate return of all multicellular eukaryotes to the unicellular state. PMID:27399791

  12. Radiofrequency treatment alters cancer cell phenotype

    Ware, Matthew J.; Tinger, Sophia; Colbert, Kevin L.; Corr, Stuart J.; Rees, Paul; Koshkina, Nadezhda; Curley, Steven; Summers, H. D.; Godin, Biana

    2015-07-01

    The importance of evaluating physical cues in cancer research is gradually being realized. Assessment of cancer cell physical appearance, or phenotype, may provide information on changes in cellular behavior, including migratory or communicative changes. These characteristics are intrinsically different between malignant and non-malignant cells and change in response to therapy or in the progression of the disease. Here, we report that pancreatic cancer cell phenotype was altered in response to a physical method for cancer therapy, a non-invasive radiofrequency (RF) treatment, which is currently being developed for human trials. We provide a battery of tests to explore these phenotype characteristics. Our data show that cell topography, morphology, motility, adhesion and division change as a result of the treatment. These may have consequences for tissue architecture, for diffusion of anti-cancer therapeutics and cancer cell susceptibility within the tumor. Clear phenotypical differences were observed between cancerous and normal cells in both their untreated states and in their response to RF therapy. We also report, for the first time, a transfer of microsized particles through tunneling nanotubes, which were produced by cancer cells in response to RF therapy. Additionally, we provide evidence that various sub-populations of cancer cells heterogeneously respond to RF treatment.

  13. Cognitive Phenotype of Velocardiofacial Syndrome: A Review

    Furniss, Frederick; Biswas, Asit B.; Gumber, Rohit; Singh, Niraj

    2011-01-01

    The behavioural phenotype of velocardiofacial syndrome (VCFS), one of the most common human multiple anomaly syndromes, includes developmental disabilities, frequently including intellectual disability (ID) and high risk of diagnosis of psychotic disorders including schizophrenia. VCFS may offer a model of the relationship between ID and risk of…

  14. Covert genetic selections to optimize phenotypes.

    Di Wu

    Full Text Available In many high complexity systems (cells, organisms, institutions, societies, economies, etc., it is unclear which components should be regulated to affect overall performance. To identify and prioritize molecular targets which impact cellular phenotypes, we have developed a selection procedure ("SPI"-single promoting/inhibiting target identification which monitors the abundance of ectopic cDNAs. We have used this approach to identify growth regulators. For this purpose, complex pools of S. cerevisiae cDNA transformants were established and we quantitated the evolution of the spectrum of cDNAs which was initially present. These data emphasized the importance of translation initiation and ER-Golgi traffic for growth. SPI provides functional insight into the stability of cellular phenotypes under circumstances in which established genetic approaches cannot be implemented. It provides a functional "synthetic genetic signature" for each state of the cell (i.e. genotype and environment by surveying complex genetic libraries, and does not require specialized arrays of cDNAs/shRNAs, deletion strains, direct assessment of clonal growth or even a conditional phenotype. Moreover, it establishes a hierarchy of importance of those targets which can contribute, either positively or negatively, to modify the prevailing phenotype. Extensions of these proof-of-principle experiments to other cell types should provide a novel and powerful approach to analyze multiple aspects of the basic biology of yeast and animal cells as well as clinically-relevant issues.

  15. Phenotyping animal models of diabetic neuropathy

    Biessels, G J; Bril, V; Calcutt, N A;

    2014-01-01

    NIDDK, JDRF, and the Diabetic Neuropathy Study Group of EASD sponsored a meeting to explore the current status of animal models of diabetic peripheral neuropathy. The goal of the workshop was to develop a set of consensus criteria for the phenotyping of rodent models of diabetic neuropathy. The...

  16. Genetical metabolomics: closing in on phenotypes

    Keurentjes, J.J.B.

    2009-01-01

    One of the long-standing goals in plant biology has been to link genotypic variation to natural variation in plant development and adaptive traits. From recent studies it has become clear that a complex interacting network is underlying phenotypic diversity. A major role in this regulatory mechanism

  17. Advances in Phenotyping of Functional Traits

    In plants, functional traits are morphological, biochemical, physiological, structural, phenological, or behavioral characteristics that are expressed in phenotypes of individual plants,that are relevant to the plant’s role in the ecosystem or its agronomic performance. By themselves, functional tra...

  18. Phenotyping for Abiotic Stress Tolerance in Maize

    Benhilda Masuka; Jose Luis Araus; Biswanath Das; Kai Sonder; Jill E. Cairns

    2012-01-01

    The ability to quickly develop germplasm having tolerance to several complex polygenic inherited abiotic and biotic stresses combined is critical to the resilience of cropping systems in the face of climate change.Molecular breeding offers the tools to accelerate cereal breeding; however,suitable phenotyping protocols are essential to ensure that the much-anticipated benefits of molecular breeding can be realized.To facilitate the full potential of molecular tools,greater emphasis needs to be given to reducing the within-experimental site variability,application of stress and characterization of the environment and appropriate phenotyping tools.Yield is a function of many processes throughout the plant cycle,and thus integrative traits that encompass crop performance over time or organization level (i.e.canopy level) will provide a better alternative to instantaneous measurements which provide only a snapshot of a given plant process.Many new phenotyping tools based on remote sensing are now available including non-destructive measurements of growth-related parameters based on spectral reflectance and infrared thermometry to estimate plant water status.Here we describe key field phenotyping protocols for maize with emphasis on tolerance to drought and low nitrogen.

  19. Behavioural Phenotypes in Disability Research: Historical Perspectives

    Goodey, C. F.

    2006-01-01

    Western medicine has a long history of accounting for behaviour by reducing the body to ultimate explanatory entities. In pre-modern medicine these were invisible "animal spirits" circulating the body. In modern medicine, they are "genes". Both raise questions. The psychological phenotype is defined by human consensus, varying according to time…

  20. Space debris

    Rossi, Alessandro

    2011-01-01

    Space debris are all man made objects including fragments and elements thereof, in Earth orbit or re-entering the atmosphere, that are non functional. This widely accepted official definition was adopted by the Inter-Agency Space Debris Coordination Committee (IADC), an international governmental forum for the worldwide coordination of activities related to the issues of man-made and natural debris in space.

  1. Morrey spaces

    Adams, David R

    2015-01-01

    In this set of lecture notes, the author includes some of the latest research on the theory of Morrey Spaces associated with Harmonic Analysis. There are three main claims concerning these spaces that are covered: determining the integrability classes of the trace of Riesz potentials of an arbitrary Morrey function; determining the dimensions of singular sets of weak solutions of PDE (e.g. The Meyers-Elcart System); and determining whether there are any “full” interpolation results for linear operators between Morrey spaces. This book will serve as a useful reference to graduate students and researchers interested in Potential Theory, Harmonic Analysis, PDE, and/or Morrey Space Theory. .

  2. Learning Spaces

    Falmagne, Jean-Claude

    2011-01-01

    Learning spaces offer a rigorous mathematical foundation for practical systems of educational technology. Learning spaces generalize partially ordered sets and are special cases of knowledge spaces. The various structures are investigated from the standpoints of combinatorial properties and stochastic processes. Leaning spaces have become the essential structures to be used in assessing students' competence of various topics. A practical example is offered by ALEKS, a Web-based, artificially intelligent assessment and learning system in mathematics and other scholarly fields. At the heart of A

  3. Determining Which Phenotypes Underlie a Pleiotropic Signal.

    Majumdar, Arunabha; Haldar, Tanushree; Witte, John S

    2016-07-01

    Discovering pleiotropic loci is important to understand the biological basis of seemingly distinct phenotypes. Most methods for assessing pleiotropy only test for the overall association between genetic variants and multiple phenotypes. To determine which specific traits are pleiotropic, we evaluate via simulation and application three different strategies. The first is model selection techniques based on the inverse regression of genotype on phenotypes. The second is a subset-based meta analysis ASSET [Bhattacharjee et al., ], which provides an optimal subset of nonnull traits. And the third is a modified Benjamini-Hochberg (B-H) procedure of controlling the expected false discovery rate [Benjamini and Hochberg, ] in the framework of phenome-wide association study. From our simulations we see that an inverse regression-based approach MultiPhen [O'Reilly et al., ] is more powerful than ASSET for detecting overall pleiotropic association, except for when all the phenotypes are associated and have genetic effects in the same direction. For determining which specific traits are pleiotropic, the modified B-H procedure performs consistently better than the other two methods. The inverse regression-based selection methods perform competitively with the modified B-H procedure only when the phenotypes are weakly correlated. The efficiency of ASSET is observed to lie below and in between the efficiency of the other two methods when the traits are weakly and strongly correlated, respectively. In our application to a large GWAS, we find that the modified B-H procedure also performs well, indicating that this may be an optimal approach for determining the traits underlying a pleiotropic signal. PMID:27238845

  4. Phenotypic extremes in rare variant study designs.

    Peloso, Gina M; Rader, Daniel J; Gabriel, Stacey; Kathiresan, Sekar; Daly, Mark J; Neale, Benjamin M

    2016-06-01

    Currently, next-generation sequencing studies aim to identify rare and low-frequency variation that may contribute to disease. For a given effect size, as the allele frequency decreases, the power to detect genes or variants of interest also decreases. Although many methods have been proposed for the analysis of such data, study design and analytic issues still persist in data interpretation. In this study we present sequencing data for ABCA1 that has known rare variants associated with high-density lipoprotein cholesterol (HDL-C). We contrast empirical findings from two study designs: a phenotypic extreme sample and a population-based random sample. We found differing strengths of association with HDL-C across the two study designs (P=0.0006 with n=701 phenotypic extremes vs P=0.03 with n=1600 randomly sampled individuals). To explore this apparent difference in evidence for association, we performed a simulation study focused on the impact of phenotypic selection on power. We demonstrate that the power gain for an extreme phenotypic selection study design is much greater in rare variant studies than for studies of common variants. Our study confirms that studying phenotypic extremes is critical in rare variant studies because it boosts power in two ways: the typical increases from extreme sampling and increasing the proportion of relevant functional variants ascertained and thereby tested for association. Furthermore, we show that when combining statistical evidence through meta-analysis from an extreme-selected sample and a second separate population-based random sample, power is lower when a traditional sample size weighting is used compared with weighting by the noncentrality parameter. PMID:26350511

  5. Accessing offshoring advantages

    Mykhaylenko, Alona; Motika, Agnes; Wæhrens, Brian Vejrum;

    2015-01-01

    Purpose – The purpose of this paper is to advance the understanding of factors that affect offshoring performance results. To do so, this paper focuses on the access to location-specific advantages, rather than solely on the properties of the offshoring company, its strategy or environment....... Assuming that different levels of synergy may exist between particular offshoring strategic decisions (choosing offshore outsourcing or captive offshoring and the type of function) and different offshoring advantages, this work advocates that the actual fact of realization of certain offshoring advantages...... (getting or not getting access to them) is a more reliable predictor of offshoring success. Design/methodology/approach – Aset of hypotheses derived from the extant literature is tested on the data from a quantitative survey of 1,143 Scandinavian firms. Findings – The paper demonstrates that different...

  6. Support open access publishing

    Ekstrøm, Jeannette

    2013-01-01

    Projektet Support Open Access Publishing har til mål at få opdateret Sherpa/Romeo databasen (www.sherpa.ac.uk/romeo) med fagligt relevante, danske tidsskrifter. Projektet skal endvidere undersøge mulighederne for at få udviklet en database, hvor forskere på tværs af relevante tidsskriftsinformati......Projektet Support Open Access Publishing har til mål at få opdateret Sherpa/Romeo databasen (www.sherpa.ac.uk/romeo) med fagligt relevante, danske tidsskrifter. Projektet skal endvidere undersøge mulighederne for at få udviklet en database, hvor forskere på tværs af relevante...

  7. Access to Research Inputs

    Czarnitzki, Dirk; Grimpe, Christoph; Pellens, Maikel

    The viability of modern open science norms and practices depend on public disclosure of new knowledge, methods, and materials. However, increasing industry funding of research can restrict the dissemination of results and materials. We show, through a survey sample of 837 German scientists in life...... sciences, natural sciences, engineering, and social sciences, that scientists who receive industry funding are twice as likely to deny requests for research inputs as those who do not. Receiving external funding in general does not affect denying others access. Scientists who receive external funding...... of any kind are, however, 50% more likely to be denied access to research materials by others, but this is not affected by being funded specifically by industry....

  8. Access to Research Inputs

    Czarnitzki, Dirk; Grimpe, Christoph; Pellens, Maikel

    2015-01-01

    The viability of modern open science norms and practices depends on public disclosure of new knowledge, methods, and materials. However, increasing industry funding of research can restrict the dissemination of results and materials. We show, through a survey sample of 837 German scientists in life...... sciences, natural sciences, engineering, and social sciences, that scientists who receive industry funding are twice as likely to deny requests for research inputs as those who do not. Receiving external funding in general does not affect denying others access. Scientists who receive external funding...... of any kind are, however, 50 % more likely to be denied access to research materials by others, but this is not affected by being funded specifically by industry...

  9. Advanced access control system

    A prototype voice verification system has been installed which provides the required positive identification at the main site access control point. This system compares an individual's file voice print with a sample voice print obtained from the individual when an attempt is made to enter the site. The voice system transmits the individual's identity to a central processor. The central processor associates that individual's authorization file with a card-key obtained at the access point. The system generates a record of personnel movement, provides a personnel inventory on a real-time basis, and it can retrieve a record of all prior events. The system installed at the Barnwell Nuclear Fuel Plant is described

  10. 基于空间句法的武汉城市圈城乡道路网通达性演化分析%The Evolution of Spatial Accessibility of Urban-rural Road Network Based on the Space Syntax in Wuhan Metropolitan Area

    刘承良; 余瑞林; 段德忠

    2015-01-01

    The spatial accessibility has been a prerequisite to the linkage and development of regional integra-tion. The relationship between the spatial evolution of metropolitan area and the development of transport net-work is a kind of spatial interaction. The transport network becomes a material basis and essential prerequisite to the foundation of metropolitan area, and the transport accessibility determines material flow, energy flow and information flow between city and region, and it’s an important gene to the development of metropolitan area. With taking Wuhan metropolitan area as example, this article explores the spatio-temporal evolution of the road network accessibility with the support of space syntax model, GIS technology and statistical analysis method. The basic conclusions are obtained as follows: 1) Pyramid structure shows that the overall level of high-grade road network topology connectivity is relatively low. The above structures and patterns of the road network have a great impact on the transportation system of the city. For instance, some roads with very low accessibility are easy to have traffic jam and low efficiency for distributing traffic flow to the entire road net-work. 2) Caused by the hierarchy of the road network topology links, the spatial differentiation of urban-rural road network traffic axes is significant, showing a typically composite structure of center-marginal and rank circle, two banded city corridors were formed around the east-west roads along the Yangtze River and the north-south roads along the Beijing-Guangzhou Railway. At the same time, the centrality advantages of Wuhan have been strengthened and a number of different levels orderly integrated“node –spoke”network system were developed. 3) The spatially uneven accessibility pattern of road network has a close relationship with the city and town system, transportation facilities and social-economic development of the area. It should also be noted that there is a

  11. RFID access control

    Luzar, Boštjan

    2012-01-01

    The goal of the thesis was to learn about the procedure of developing applications based on microcontrollers using the Arduino development platform and the IDE environment. Through practical development in the Arduino environment we realized a logic which is capable to authorize access to specific locations and areas based on 125 kHz RFID tags. Although many solutions exist, most of them require a lot of hardware and software because of their modular design and communication types, the so...

  12. Accessibility and Economic Opportunity

    O'Regan, Katherine M.; Quigley, John M.

    1997-01-01

    Over thirty years ago, researchers raised the possibility of an important link between transportation, jobs and prospects for the poor. Decentralized employment, centralized minorities and poor, and inadequate transportation links in between were the context of the urban riots of the 1960's and posited as a causal factor by researchers. Given federal mandates for large-scale movement of welfare recipients into jobs, whether--and to what extent--access affects employment is still of national i...

  13. Advanced access control system

    A prototype voice verification system has been installed which provides the required positive identification at the main site access control point. This system compares an individual's file voice print with a sample voice print obtained from the individual when an attempt is made to enter the site. The voice system transmits the individual's identify to a central processor. The system installed at the Barnwell Nuclear Fuel Plant is described

  14. Network access to PCDS (SPAN, ESN, SESNET, ARPANET)

    Green, J.

    1986-01-01

    One of the major goals of the National Space Science Data Center is to increase access to NASA data systems by enhancing networking activities. The activities are centered around three basic networking systems: the Space Physics Analysis Network (SPAN); the Earth Science Network (ESN); and the NASA Packet Switched System (NPSS). Each system is described, linkages among systems are explained, and future plans are announced. The inclusion of several new climate nodes on SPAN or ESN are also mentioned. Presently, the Pilot Climate Data System is accessible through SPAN and will be accessible through NPSS by summer and ESN by the end of 1986. Ambitious plans for implementation are underway. The implementation of these plans will represent a major advance in the utilization and accessibility of data worldwide.

  15. Lockheed Martin Launch Vehicle - Commercial Access to Space

    Cobb, Jerry; Chase, Charles; Buhaly, David; Galbraeth, Joseph

    1997-01-01

    This paper will discuss the background and history of the LMLV program and the teaming relationship. We will also discuss the vehicle itself and it's capabilities. The process of reviewing the launch vehicle after the DLV failure will be discussed followed by a review of the highly successful LMLV -1 mission on 22 August 1997. Flight data from this mission will be presented. The paper will conclude with a review of future planned launches and opportunities for new customers.

  16. The Time Between: Continuously-defined accessibility functions for schedule-based transportation systems

    Paul Anderson; Andrew Owen; David Levinson

    2012-01-01

    Accessibility is traditionally considered to be a property of a point or region in space, and to be invariant over time (or at least over some computationally convenient time interval). How- ever, a locations accessibility can vary over time on a wide range of scales. This temporal variation is especially significant for schedule-based transportation systems. Current measures of accessibility generally reflect the accessibility only at points in time corresponding to the departures of one or ...

  17. Remote access thyroid surgery.

    Bhatia, Parisha; Mohamed, Hossam Eldin; Kadi, Abida; Kandil, Emad; Walvekar, Rohan R

    2015-10-01

    Robot assisted thyroid surgery has been the latest advance in the evolution of thyroid surgery after endoscopy assisted procedures. The advantage of a superior field vision and technical advancements of robotic technology have permitted novel remote access (trans-axillary and retro-auricular) surgical approaches. Interestingly, several remote access surgical ports using robot surgical system and endoscopic technique have been customized to avoid the social stigma of a visible scar. Current literature has displayed their various advantages in terms of post-operative outcomes; however, the associated financial burden and also additional training and expertise necessary hinder its widespread adoption into endocrine surgery practices. These approaches offer excellent cosmesis, with a shorter learning curve and reduce discomfort to surgeons operating ergonomically through a robotic console. This review aims to provide details of various remote access techniques that are being offered for thyroid resection. Though these have been reported to be safe and feasible approaches for thyroid surgery, further evaluation for their efficacy still remains. PMID:26425450

  18. Intelligent card access keys

    A newly developed access control technology allows information about users to be stored on key-like EEPROM devices. The keys store encrypted information about the user and his or her authorized access activity. Specially developed key readers scan, decrypt, and process the key data, and make the decision whether entry should be granted or denied. The key readers can function as complete, stand-alone facility management systems, incorporating access control, security monitoring, and remote control. In this configuration, the key readers provide anti-passback protection and other special features without requiring any data lines between readers. The key readers also feature sophisticated algorithmic processing for performing complex operations such as two-man control or cross zoned security annunciation. Key readers can also be interconnected with an MCM-1000 Multiples Monitoring System to form a distributed processing local area network. In such a configuration, changes in key reader status can be uploaded to the MCM-1000, and programming changes and operator commands can be downloaded to the key readers

  19. Direct access to INIS

    Librarians, researchers, and information specialists throughout the world now have the opportunity for direct access to coverage of almost 95% of the world's literature dealing with the peaceful uses of atomic energy and nuclear science. This opportunity has been provided by the International Nuclear Information System (INIS) of the IAEA. INIS, with the voluntary collaboration of more than 60 of the Agency's Member States, maintains a comprehensive, computer-resident data-base, containing the bibliographic details plus informative abstracts of the bulk of the world's literature on nuclear science and technology. Since this data-base is growing at a rate of 75,000 items per year, and already contains more than 500,000 items, it is obviously important to be able to search this collection conveniently and efficiently. The usefulness of this ability is enhanced when other data-bases on related subjects are made available on an information network. During the early 1970s, on-line interrogation of large bibliographic data-bases became the accepted method for searching this type of information resource. Direct interaction between the searcher and the data-base provides quick feed-back resulting in improved literature listings for launching research and development projects. On-line access enables organizations which cannot store a large data-base on their own computer to expand the information resources at their command. Because of these advantages, INIS undertook to extend to interested Member States on-line access to its data-base in Vienna

  20. ADOPT Open Access

    2007-01-01

    Are you writing a theoretical paper? An experimental one? Or one about instrumentation? You can publish it in Open Access. Now. Read how... You might have heard about Open Access, the next big thing in scientific publishing. The idea is to make the results of your (publicly funded) research free to read for everyone out there ... not only those lucky ones who work in places where libraries can afford to purchase the expensive subscriptions to scientific journals. CERN, DESY and other particle physics institutes have accepted an offer by one of the leading journals in High Energy Physics, JHEP: our libraries will pay a special subscription fee, and, in exchange, all articles with at least one author from our institutes will be published in Open Access. Anyone, anywhere and anytime will be able to read them, without any financial barrier! If you are writing an instrumentation paper, you can submit it to JINST and benefit from the same offer. This is a major step forward in the planned conversion of existi...

  1. Open-Access Publishing

    Nedjeljko Frančula

    2013-06-01

    Full Text Available Nature, one of the most prominent scientific journals dedicated one of its issues to recent changes in scientific publishing (Vol. 495, Issue 7442, 27 March 2013. Its editors stressed that words technology and revolution are closely related when it comes to scientific publishing. In addition, the transformation of research publishing is not as much a revolution than an attrition war in which all sides are buried. The most important change they refer to is the open-access model in which an author or an institution pays in advance for publishing a paper in a journal, and the paper is then available to users on the Internet free of charge.According to preliminary results of a survey conducted among 23 000 scientists by the publisher of Nature, 45% of them believes all papers should be published in open access, but at the same time 22% of them would not allow the use of papers for commercial purposes. Attitudes toward open access vary according to scientific disciplines, leading the editors to conclude the revolution still does not suit everyone.

  2. An Adaptive Association Test for Multiple Phenotypes with GWAS Summary Statistics.

    Kim, Junghi; Bai, Yun; Pan, Wei

    2015-12-01

    We study the problem of testing for single marker-multiple phenotype associations based on genome-wide association study (GWAS) summary statistics without access to individual-level genotype and phenotype data. For most published GWASs, because obtaining summary data is substantially easier than accessing individual-level phenotype and genotype data, while often multiple correlated traits have been collected, the problem studied here has become increasingly important. We propose a powerful adaptive test and compare its performance with some existing tests. We illustrate its applications to analyses of a meta-analyzed GWAS dataset with three blood lipid traits and another with sex-stratified anthropometric traits, and further demonstrate its potential power gain over some existing methods through realistic simulation studies. We start from the situation with only one set of (possibly meta-analyzed) genome-wide summary statistics, then extend the method to meta-analysis of multiple sets of genome-wide summary statistics, each from one GWAS. We expect the proposed test to be useful in practice as more powerful than or complementary to existing methods. PMID:26493956

  3. Accessibility of islands: towards a new geography based on transportation modes and choices

    Sofia Karampela

    2014-11-01

    Full Text Available Accessibility is a multifaceted concept that expresses the case of access between two points in space. For islands, accessibility is a key quality, since isolation and small size considered as inherent characteristics of “islandness”. In this paper, we discuss differences between geographical distance and accessibility potential in the Greek Aegean, combining different transportation modal choice (ferries and airplanes with the use of an accessibility index that incorporates modes and frequency of connection and data of actual usage. The findings indicate that geographical distance is not determining accessibility and new geographies emerge based more on the availability of transport modal choices.

  4. The Structuring of Personal Example Spaces

    Sinclair, Nathalie; Watson, Anne; Zazkis, Rina; Mason, John

    2011-01-01

    This paper elaborates the notion of a personal example space as the set of mathematical objects and construction techniques that a learner has access to as examples of a concept while working on a given task. This is different from the conventional space of examples that is represented by the worked examples and exercises in textbooks. We refer to…

  5. Classification and valuation of urban green spaces

    Panduro, Toke Emil; Veie, Kathrine Lausted

    2013-01-01

    and a rating system in which each green space was rated according to accessibility, maintenance levels and neighboring negative land-use. The hedonic house price schedule for each of the green spaces was estimated using a generalized additive model, which allows for a data driven adjustment of...

  6. Space Images for NASA/JPL

    Boggs, Karen; Gutheinz, Sandy C.; Watanabe, Susan M.; Oks, Boris; Arca, Jeremy M.; Stanboli, Alice; Peez, Martin; Whatmore, Rebecca; Kang, Minliang; Espinoza, Luis A.

    2010-01-01

    Space Images for NASA/JPL is an Apple iPhone application that allows the general public to access featured images from the Jet Propulsion Laboratory (JPL). A back-end infrastructure stores, tracks, and retrieves space images from the JPL Photojournal Web server, and catalogs the information into a streamlined rating infrastructure.

  7. Space Telescope.

    National Aeronautics and Space Administration, Huntsville, AL. George C. Marshall Space Flight Center.

    This pamphlet describes the Space Telescope, an unmanned multi-purpose telescope observatory planned for launch into orbit by the Space Shuttle in the 1980s. The unique capabilities of this telescope are detailed, the major elements of the telescope are described, and its proposed mission operations are outlined. (CS)

  8. Space Microbiology

    Horneck, Gerda; Klaus, David M.; Mancinelli, Rocco L.

    2010-01-01

    Summary: The responses of microorganisms (viruses, bacterial cells, bacterial and fungal spores, and lichens) to selected factors of space (microgravity, galactic cosmic radiation, solar UV radiation, and space vacuum) were determined in space and laboratory simulation experiments. In general, microorganisms tend to thrive in the space flight environment in terms of enhanced growth parameters and a demonstrated ability to proliferate in the presence of normally inhibitory levels of antibiotics. The mechanisms responsible for the observed biological responses, however, are not yet fully understood. A hypothesized interaction of microgravity with radiation-induced DNA repair processes was experimentally refuted. The survival of microorganisms in outer space was investigated to tackle questions on the upper boundary of the biosphere and on the likelihood of interplanetary transport of microorganisms. It was found that extraterrestrial solar UV radiation was the most deleterious factor of space. Among all organisms tested, only lichens (Rhizocarpon geographicum and Xanthoria elegans) maintained full viability after 2 weeks in outer space, whereas all other test systems were inactivated by orders of magnitude. Using optical filters and spores of Bacillus subtilis as a biological UV dosimeter, it was found that the current ozone layer reduces the biological effectiveness of solar UV by 3 orders of magnitude. If shielded against solar UV, spores of B. subtilis were capable of surviving in space for up to 6 years, especially if embedded in clay or meteorite powder (artificial meteorites). The data support the likelihood of interplanetary transfer of microorganisms within meteorites, the so-called lithopanspermia hypothesis. PMID:20197502

  9. Performative Spaces

    Svaneklink, Annette

    2009-01-01

    can be related to traditional architectural concepts in terms of dealing with space, body, time and movement. The paper considers this performativity and dual spatiality as being a processual architecture, constantly reconfiguring new hybrids between space, image and user. This dual spatiality raises...

  10. Space psychology

    Parin, V. V.; Gorbov, F. D.; Kosmolinskiy, F. P.

    1974-01-01

    Psychological selection of astronauts considers mental responses and adaptation to the following space flight stress factors: (1) confinement in a small space; (2) changes in three dimensional orientation; (3) effects of altered gravity and weightlessness; (4) decrease in afferent nerve pulses; (5) a sensation of novelty and danger; and (6) a sense of separation from earth.

  11. Endemic species have highly integrated phenotypes, environmental distributions and phenotype-environment relationships

    Hermant, M.; Prinzing, A.; Vernon, P.; Convey, P.; Hennion, F.

    2013-01-01

    Keywords: Abiotic environmental gradients; endemism level; functional biogeography; island biogeography; Kerguelen Islands; life-history traits; multi-species comparison; phenotypic integration; range size; sub-Antarctic Abstract Aim: Why are some species geographically restricted? Ecological explan

  12. Access Path Planning of Mobile Agent in Wireless Sensor Networks

    Chaoyu Yang; Minli Song

    2014-01-01

    Adopting the two-stage optimization model and hybrid optimized algorithm based on evolutionary computation, a new two-stage optimization model that more conforms to the actual demand is proposed on the basis of formal description of Mobile Agent access path planning. This new model divides the access path planning problem into two sub problems of integer linear programming --data integration sub paths and return sub paths, which can reduce search space and improve the efficiency of algorithm....

  13. Highly Dynamic Spectrum Management within Licensed Shared Access Regulatory Framework

    Ponomarenko-Timofeev, Aleksei; Pyattaev, Alexander; Andreev, Sergey; Koucheryavy, Yevgeni; Mueck, Markus; Karls, Ingolf

    2015-01-01

    Historical fragmentation in spectrum access models accentuates the need for novel concepts that allow for efficient sharing of already available but underutilized spectrum. The emerging Licensed Shared Access (LSA) regulatory framework is expected to enable more advanced spectrum sharing between a limited number of users while guaranteeing their much needed interference protection. However, the ultimate benefits of LSA may in practice be constrained by space-time availability of the LSA bands...

  14. Health-related phenotypes and longevity in Danish twins

    Kulminski, Alexander M; Arbeev, Konstantin G; Culminskaya, Irina V;

    2009-01-01

    Aging studies can be facilitated by refocusing from longevity phenotypes to their proxies (intermediate phenotypes). Robust selection of the intermediate phenotypes requires data on such phenotypes and life span measured in the same individuals, which is not always the case in aging studies. A...... promising approach is to select intermediate phenotypes using information on longevity measured in related individuals. We evaluated feasibility of this approach focusing on 32 geriatric diseases as potential intermediate phenotypes of longevity assessed in the Longitudinal Study of Aging Danish Twins. Our...

  15. Random Access to Grammar Compressed Strings

    Bille, Philip; Weimann, Oren

    2010-01-01

    Grammar based compression, where one replaces a long string by a small context-free grammar that generates the string, is a simple and powerful paradigm that captures many of the popular compression schemes, including the Lempel-Ziv family, Run-Length Encoding, Byte-Pair Encoding, Sequitur, and Re-Pair. In this paper, we present a novel grammar representation that allows efficient random access to any character or substring of $S$ without decompressing $S$. Let $S$ be a string of length $N$ compressed into a context-free grammar $\\mathcal{S}$ of size $n$. We present two representations of $\\mathcal{S}$ achieving either O(n) construction time and space and $O(\\log N \\log \\log N)$ random access time, or $O(n\\cdot \\alpha_k(n))$ construction time and space and $O(\\log N)$ random access time. Here, $\\alpha_k(n)$ is the inverse of the $k^{th}$ row of Ackermann's function. Our representations extend to efficiently support decompression of any substring in $S$. Namely, we can decompress any substring of length $m$ in...

  16. Configurable Aperture Space Telescope

    Ennico, Kimberly; Bendek, Eduardo

    2015-01-01

    In December 2014, we were awarded Center Innovation Fund to evaluate an optical and mechanical concept for a novel implementation of a segmented telescope based on modular, interconnected small sats (satlets). The concept is called CAST, a Configurable Aperture Space Telescope. With a current TRL is 2 we will aim to reach TLR 3 in Sept 2015 by demonstrating a 2x2 mirror system to validate our optical model and error budget, provide straw man mechanical architecture and structural damping analyses, and derive future satlet-based observatory performance requirements. CAST provides an alternative access to visible and/or UV wavelength space telescope with 1-meter or larger aperture for NASA SMD Astrophysics and Planetary Science community after the retirement of HST

  17. Small Space Launch: Origins & Challenges

    Freeman, T.; Delarosa, J.

    2010-09-01

    The United States Space Situational Awareness capability continues to be a key element in obtaining and maintaining the high ground in space. Space Situational Awareness satellites are critical enablers for integrated air, ground and sea operations, and play an essential role in fighting and winning conflicts. The United States leads the world space community in spacecraft payload systems from the component level into spacecraft, and in the development of constellations of spacecraft. In the area of launch systems that support Space Situational Awareness, despite the recent development of small launch vehicles, the United States launch capability is dominated by an old, unresponsive and relatively expensive set of launchers in the Expandable, Expendable Launch Vehicles (EELV) platforms; Delta IV and Atlas V. The United States directed Air Force Space Command to develop the capability for operationally responsive access to space and use of space to support national security, including the ability to provide critical space capabilities in the event of a failure of launch or on-orbit capabilities. On 1 Aug 06, Air Force Space Command activated the Space Development & Test Wing (SDTW) to perform development, test and evaluation of Air Force space systems and to execute advanced space deployment and demonstration projects to exploit new concepts and technologies, and rapidly migrate capabilities to the warfighter. The SDTW charged the Launch Test Squadron (LTS) with the mission to develop the capability of small space launch, supporting government research and development space launches and missile defense target missions, with operationally responsive spacelift for Low-Earth-Orbit Space Situational Awareness assets as a future mission. This new mission created new challenges for LTS. The LTS mission tenets of developing space launches and missile defense target vehicles were an evolution from the squadrons previous mission of providing sounding rockets under the Rocket

  18. After Access: Underrepresented Students' Postmatriculation Perceptions of College Access Capital

    Means, Darris R.; Pyne, Kimberly B.

    2016-01-01

    This qualitative study explores the perceived impact of college-going capital gained during participation in a college access program. In three, semistructured interviews spanning the first-year college experience, 10 first-year college students who participated in a college access program articulate the value of access programming and also raise…

  19. Belief propagation in genotype-phenotype networks.

    Moharil, Janhavi; May, Paul; Gaile, Daniel P; Blair, Rachael Hageman

    2016-03-01

    Graphical models have proven to be a valuable tool for connecting genotypes and phenotypes. Structural learning of phenotype-genotype networks has received considerable attention in the post-genome era. In recent years, a dozen different methods have emerged for network inference, which leverage natural variation that arises in certain genetic populations. The structure of the network itself can be used to form hypotheses based on the inferred direct and indirect network relationships, but represents a premature endpoint to the graphical analyses. In this work, we extend this endpoint. We examine the unexplored problem of perturbing a given network structure, and quantifying the system-wide effects on the network in a node-wise manner. The perturbation is achieved through the setting of values of phenotype node(s), which may reflect an inhibition or activation, and propagating this information through the entire network. We leverage belief propagation methods in Conditional Gaussian Bayesian Networks (CG-BNs), in order to absorb and propagate phenotypic evidence through the network. We show that the modeling assumptions adopted for genotype-phenotype networks represent an important sub-class of CG-BNs, which possess properties that ensure exact inference in the propagation scheme. The system-wide effects of the perturbation are quantified in a node-wise manner through the comparison of perturbed and unperturbed marginal distributions using a symmetric Kullback-Leibler divergence. Applications to kidney and skin cancer expression quantitative trait loci (eQTL) data from different mus musculus populations are presented. System-wide effects in the network were predicted and visualized across a spectrum of evidence. Sub-pathways and regions of the network responded in concert, suggesting co-regulation and coordination throughout the network in response to phenotypic changes. We demonstrate how these predicted system-wide effects can be examined in connection with

  20. Identification of genomic regions associated with phenotypic variation between dog breeds using selection mapping.

    Vaysse, Amaury; Ratnakumar, Abhirami; Derrien, Thomas; Axelsson, Erik; Rosengren Pielberg, Gerli; Sigurdsson, Snaevar; Fall, Tove; Seppälä, Eija; Hansen, Mark,; Lawley, Cindy; Karlsson, Elinor; Bannasch, Danika; Vilà, Carles; Lohi, Hannes; Galibert, Francis

    2011-01-01

    The extraordinary phenotypic diversity of dog breeds has been sculpted by a unique population history accompanied by selection for novel and desirable traits. Here we perform a comprehensive analysis using multiple test statistics to identify regions under selection in 509 dogs from 46 diverse breeds using a newly developed high-density genotyping array consisting of >170,000 evenly spaced SNPs. We first identify 44 genomic regions exhibiting extreme differentiation across multiple breeds. Ge...

  1. Identification of Genomic Regions Associated with Phenotypic Variation between Dog Breeds using Selection Mapping

    Vaysse, Amaury; Ratnakumar, Abhirami; Derrien, Thomas; Axelsson, Erik; Rosengren Pielberg, Gerli; Sigurdsson, Snaevar; Fall, Tove; Seppälä, Eija H; Hansen, Mark S. T.; Lawley, Cindy T.; Karlsson, Elinor K.; Bannasch, Danika; Vilà, Carles; Lohi, Hannes; Galibert, Francis

    2011-01-01

    The extraordinary phenotypic diversity of dog breeds has been sculpted by a unique population history accompanied by selection for novel and desirable traits. Here we perform a comprehensive analysis using multiple test statistics to identify regions under selection in 509 dogs from 46 diverse breeds using a newly developed high-density genotyping array consisting of >170,000 evenly spaced SNPs. We first identify 44 genomic regions exhibiting extreme differentiation across multiple breeds. Ge...

  2. Obesity and access to chain grocers.

    Chen, Susan; Florax, Raymond J G M; Snyder, Samantha; Miller, Christopher C

    2010-01-01

    Recent empirical work in the obesity literature has highlighted the role of the built environment and its potential influence in the increasing prevalence of obesity in adults and children. One feature of the built environment that has gained increasing attention is the role of access to chain grocers and their impact on body mass index (BMI). The assessment of the impacts of spatial access to chain grocers on BMI is complicated by two empirical regularities in the data. There is evidence that health outcomes such as BMI are clustered in space and that there is spatial dependence across individuals. In this article, we use an econometric model that takes into account the spatial dependence, and we allow the effect of access to differ for a person depending on whether he or she lives in a low-income community or peer group. We categorize this community using the characteristics of the people who immediately surround the individual rather than using census tracts. Using georeferenced survey data on adults in Marion County, Indiana, we find that the effect of improvements in chain grocer access on BMI varies depending on community characteristics. PMID:21117331

  3. Why Full Open Access Matters

    2011-01-01

    This perspective explains the mechanics of copyright and scholarly publishing and warns authors who support open-access publishing about a new pseudo open-access publishing model in which authors pay but publishers still retain commercial reuse rights.

  4. Parking Spaces

    Armstrong, Drew; Rhoades, Brendon

    2012-01-01

    Let $W$ be a Weyl group with root lattice $Q$ and Coxeter number $h$. The elements of the finite torus $Q/(h+1)Q$ are called the $W$-{\\sf parking functions}, and we call the permutation representation of $W$ on the set of $W$-parking functions the (standard) $W$-{\\sf parking space}. Parking spaces have interesting connections to enumerative combinatorics, diagonal harmonics, and rational Cherednik algebras. In this paper we define two new $W$-parking spaces, called the {\\sf noncrossing parking space} and the {\\sf algebraic parking space}, with the following features: 1) They are defined more generally for real reflection groups. 2) They carry not just $W$-actions, but $W\\times C$-actions, where $C$ is the cyclic subgroup of $W$ generated by a Coxeter element. 3) In the crystallographic case, both are isomorphic to the standard $W$-parking space. Our Main Conjecture is that the two new parking spaces are isomorphic to each other as permutation representations of $W\\times C$. This conjecture ties together sever...

  5. Chemists, Access, Statistics

    Holmes, Jon L.

    2000-06-01

    New JCE Internet Feature at JCE Online Biographical Snapshots of Famous Chemists is a new JCE Internet feature on JCE Online. Edited by Barbara Burke, this feature provides biographical information on leading chemists, especially women and minority chemists, fostering the attitude that the practitioners of chemistry are as human as those who endeavor to learn about it. Currently, the column features biographical "snapshots" of 30 chemists. Each snapshot includes keywords and bibliography and several contain links to additional online information about the chemist. More biographical snapshots will appear in future installments. In addition, a database listing over 140 women and minority chemists is being compiled and will be made available online with the snapshots in the near future. The database includes the years of birth and death, gender and ethnicity, major and minor discipline, keywords to facilitate searching, and references to additional biographical information. We welcome your input into what we think is a very worthwhile resource. If you would like to provide additional biographical snapshots, see additional chemists added to the database, or know of additional references for those that are already in the database, please contact JCE Online or the feature editor. Your feedback is welcome and appreciated. You can find Biographical Snapshots of Famous Chemists starting from the JCE Online home page-- click the Features item under JCE Internet and then the Chemist Bios item. Access JCE Online without Name and Password We have recently been swamped by libraries requesting IP-number access to JCE Online. With the great benefit IP-number authentication gives to librarians (no user names and passwords to administer) and to their patrons (no need to remember and enter valid names and passwords) this is not surprising. If you would like access to JCE Online without the need to remember and enter a user name and password, you should tell your librarian about our

  6. The behavioral phenotype of FMR1 mutations.

    Boyle, Lia; Kaufmann, Walter E

    2010-11-15

    The purpose of this article is to provide an overview of the behavioral phenotype of FMR1 mutations, including fragile X syndrome (FXS) in order to better understand the clinical involvement of individuals affected by mutations in this gene. FXS is associated with a wide range of intellectual and behavioral problems, some relatively mild and others quite severe. FXS is the most common cause of inherited intellectual disability and one of the most prevalent genetic causes of autism spectrum disorder. Learning difficulties, attentional problems, anxiety, aggressive behavior, stereotypies, and mood disorders are also frequent in FXS. Recent studies of children and adults have identified associations between FMR1 premutation and many of the same disorders. We examine the neurobehavioral phenotypes of FXS and FMR1 premutation as they manifest across the lifespan of the individual. PMID:20981777

  7. Diagnosis, assessment, and phenotyping of COPD

    Lange, Peter; Halpin, David M; O'Donnell, Denis E;

    2016-01-01

    COPD is now widely recognized as a complex heterogeneous syndrome, having both pulmonary and extrapulmonary features. In clinical practice, the diagnosis of COPD is based on the presence of chronic airflow limitation, as assessed by post-bronchodilator spirometry. The severity of the airflow...... limitation, as measured by percent predicted FEV1, provides important information to the physician to enable optimization of management. However, in order to accurately assess the complexity of COPD, there need to be other measures made beyond FEV1. At present, there is a lack of reliable and simple blood...... biomarkers to confirm and further assess the diagnosis of COPD. However, it is possible to identify patients who display different phenotypic characteristics of COPD that relate to clinically relevant outcomes. Currently, validated phenotypes of COPD include alpha-1 antitrypsin deficiency, and "frequent...

  8. Evolution of environmental cues for phenotypic plasticity.

    Chevin, Luis-Miguel; Lande, Russell

    2015-10-01

    Phenotypically plastic characters may respond to multiple variables in their environment, but the evolutionary consequences of this phenomenon have rarely been addressed theoretically. We model the evolution of linear reaction norms in response to several correlated environmental variables, in a population undergoing stationary environmental fluctuations. At evolutionary equilibrium, the linear combination of environmental variables that acts as a developmental cue for the plastic trait is the multivariate best linear predictor of changes in the optimum. However, the reaction norm with respect to any single environmental variable may exhibit nonintuitive patterns. Apparently maladaptive, or hyperadaptive plasticity can evolve with respect to single environmental variables, and costs of plasticity may increase, rather than reduce, plasticity in response to some variables. We also find conditions for the evolution of an indirect environmental indicator that affects expression of a plastic phenotype, despite not influencing natural selection on it. PMID:26292649

  9. Histomorphological Phenotyping of the Adult Mouse Brain.

    Mikhaleva, Anna; Kannan, Meghna; Wagner, Christel; Yalcin, Binnaz

    2016-01-01

    This article describes a series of standard operating procedures for morphological phenotyping of the mouse brain using basic histology. Many histological studies of the mouse brain use qualitative approaches based on what the human eye can detect. Consequently, some phenotypic information may be missed. Here we describe a quantitative approach for the assessment of brain morphology that is simple and robust. A total of 78 measurements are made throughout the brain at specific and well-defined regions, including the cortex, the hippocampus, and the cerebellum. Experimental design and timeline considerations, including strain background effects, the importance of sectioning quality, measurement variability, and efforts to correct human errors are discussed. © 2016 by John Wiley & Sons, Inc. PMID:27584555

  10. Space Bugz!

    Birke, Alexander; Schoenau-Fog, Henrik; Reng, Lars

    2012-01-01

    This paper presents Space Bugz! - a novel crowd game for large venues or cinemas that utilises the audience's smartphones as controllers for the game. This paper explains what crowd gaming is and describes how the approach used in Space Bugz! enables more advanced gameplay concepts and individual...... player control than current technologies allow. The gameplay of Space Bugz! is then explained along with the technical architecture of the game. After this, the iterative design process used to create the game is described together with future perspectives. The article concludes with links to a video...

  11. Conjugation spaces

    Hausmann, Jean-Claude; Holm, Tara; Puppe, Volker

    2005-01-01

    There are classical examples of spaces X with an involution tau whose mod 2-comhomology ring resembles that of their fixed point set X^tau: there is a ring isomorphism kappa: H^2*(X) --> H^*(X^tau). Such examples include complex Grassmannians, toric manifolds, polygon spaces. In this paper, we show that the ring isomorphism kappa is part of an interesting structure in equivariant cohomology called an H^*-frame. An H^*-frame, if it exists, is natural and unique. A space with involution admitti...

  12. Knowledge spaces

    Doignon, Jean-Paul

    1999-01-01

    Knowledge spaces offer a rigorous mathematical foundation for various practical systems of knowledge assessment. An example is offered by the ALEKS system (Assessment and LEarning in Knowledge Spaces), a software for the assessment of mathematical knowledge. From a mathematical standpoint, knowledge spaces generalize partially ordered sets. They are investigated both from a combinatorial and a stochastic viewpoint. The results are applied to real and simulated data. The book gives a systematic presentation of research and extends the results to new situations. It is of interest to mathematically oriented readers in education, computer science and combinatorics at research and graduate levels. The text contains numerous examples and exercises and an extensive bibliography.

  13. Space medicine

    Pool, Sam L.

    1988-01-01

    This paper attempts to underscore the importance of continued studies on the effects of space on human physiology. With particular reference to the Space Station, it is pointed out that there are two aspects which are challenging to life scientists: first is the development of a research capability for the life sciences which will be used to conduct investigations necessary to extend the time humans can remain in space; second is the challenge to develop a medical capability to provide prevention, diagnosis, and therapy. A discussion of physiological changes that have been observed in spacecrews follows along the lines of the two aspects mentioned.

  14. Analysing Access Control Specifications

    Probst, Christian W.; Hansen, René Rydhof

    2009-01-01

    common tool to answer this question, analysis of log files, faces the problem that the amount of logged data may be overwhelming. This problems gets even worse in the case of insider attacks, where the attacker’s actions usually will be logged as permissible, standard actions—if they are logged at all....... Recent events have revealed intimate knowledge of surveillance and control systems on the side of the attacker, making it often impossible to deduce the identity of an inside attacker from logged data. In this work we present an approach that analyses the access control configuration to identify the set...

  15. NASA - Human Space Flight

    Davis, Jeffrey R.

    2006-01-01

    The presentation covers five main topical areas. The first is a description of how things work in the microgravity environment such as convection and sedimentation. The second part describes the effects of microgravity on human physiology. This is followed by a description of the hazards of space flight including the environment, the space craft, and the mission. An overview of biomedical research in space, both on shuttle and ISS is the fourth section of the presentation. The presentation concludes with a history of space flight from Ham to ISS. At CART students (11th and 12th graders from Fresno Unified and Clovis Unified) are actively involved in their education. They work in teams to research real world problems and discover original solutions. Students work on projects guided by academic instructors and business partners. They will have access to the latest technology and will be expected to expand their learning environment to include the community. They will focus their studies around a career area (Professional Sciences, Advanced Communications, Engineering and Product Development, or Global Issues).

  16. Astrophysics and Space Science

    Mould, Jeremy; Brinks, Elias; Khanna, Ramon

    2015-08-01

    Astrophysics and Space Science publishes original contributions and invited reviews covering the entire range of astronomy, astrophysics, astrophysical cosmology, planetary and space science, and the astrophysical aspects of astrobiology. This includes both observational and theoretical research, the techniques of astronomical instrumentation and data analysis, and astronomical space instrumentation. We particularly welcome papers in the general fields of high-energy astrophysics, astrophysical and astrochemical studies of the interstellar medium including star formation, planetary astrophysics, the formation and evolution of galaxies and the evolution of large scale structure in the Universe. Papers in mathematical physics or in general relativity which do not establish clear astrophysical applications will not longer be considered.The journal also publishes topical collections consisting of invited reviews and original research papers selected special issues in research fields of particular scientific interest. These consist of both invited reviews and original research papers.Conference proceedings will not be considered. All papers published in the journal are subject to thorough and strict peer-reviewing.Astrophysics and Space Science has an Impact Factor of 2.4 and features short editorial turnaround times as well as short publication times after acceptance, and colour printing free of charge. Published by Springer the journal has a very wide online dissemination and can be accessed by researchers at a very large number of institutes worldwide.

  17. Mechanisms that improve referential access*

    Gernsbacher, Morton Ann

    1989-01-01

    Two mechanisms, suppression and enhancement, are proposed to improve referential access. Enhancement improves the accessibility of previously mentioned concepts by increasing or boosting their activation; suppression improves concepts’ accessibility by decreasing or dampening the activation of other concepts. Presumably, these mechanisms are triggered by the informational content of anaphors. Six experiments investigated this proposal by manipulating whether an anaphoric reference was made wi...

  18. Online Information Source & Access Method

    Sthapit, Dilip Man

    2009-01-01

    Online resources play important role in research and development of the country. So, LIS professional are interested in accessing and guiding users and readers to all available information sources. This article highlighted and described the availability of online information sources, open access e-journals and its access method.

  19. Sleep Duration and Breast Cancer Phenotype

    Ali Khawaja; Santosh Rao; Li Li; Thompson, Cheryl L.

    2013-01-01

    Emerging evidence suggests that short sleep is associated with an increased risk of cancer; however, little has been done to study the role of sleep on tumor characteristics. In this study, we evaluated the relationship between sleep duration and tumor phenotype in 972 breast cancer patients. Sleep duration was inversely associated with tumor grade (univariate P = 0.032), particularly in postmenopausal women (univariate P = 0.018). This association did not reach statistical significance after...

  20. Prions, protein homeostasis, and phenotypic diversity

    Halfmann, Randal; Alberti, Simon; Lindquist, Susan

    2010-01-01

    Prions are fascinating but often misunderstood protein aggregation phenomena. The traditional association of the mammalian prion protein with disease has overshadowed a potentially more interesting attribute of prions: their ability to create protein-based molecular memories. In fungi, prions alter the relationship between genotype and phenotype in a heritable way that diversifies clonal populations. Recent findings in yeast indicate that prions might be much more common than previously real...

  1. Lewis phenotype, secretor status, and coeliac disease.

    Dickey, W; Wylie, J D; Collins, J S; Porter, K G; Watson, R G; McLoughlin, J C

    1994-01-01

    Patients who cannot secrete ABO and Lewis blood group antigens into body fluids, an ability controlled by a single gene on chromosome 19, are known to be at increased risk of certain autoimmune diseases associated with human leucocyte antigen (HLA) markers. This study investigated the possibility of an association with coeliac disease using red cell Lewis (Le) blood group phenotype to infer secretor status. Among 73 patients with coeliac disease who had Le a or b antigen, 48% were non-secreto...

  2. Connectomic intermediate phenotypes for psychiatric disorders

    Alex eFornito

    2012-04-01

    Full Text Available Psychiatric disorders are phenotypically heterogeneous entities with a complex genetic basis. To mitigate this complexity, many investigators study so-called intermediate phenotypes that putatively provide a more direct index of the physiological effects of candidate genetic risk variants than overt psychiatric syndromes. Magnetic resonance imaging (MRI is a particularly popular technique for measuring such phenotypes because it allows interrogation of diverse aspects of brain structure and function in vivo. Much of this work however, has focused on relatively simple measures that quantify variations in the physiology or tissue integrity of specific brain regions in isolation, contradicting an emerging consensus that most major psychiatric disorders do not arise from isolated dysfunction in one or a few brain regions, but rather from disturbed interactions within and between distributed neural circuits; i.e., they are disorders of brain connectivity. The recent proliferation of new MRI techniques for comprehensively mapping the entire connectivity architecture of the brain, termed the human connectome, has provided a rich repertoire of tools for understanding how genetic variants implicated in mental disorder impact distinct neural circuits. In this article, we review research using these connectomic techniques to understand how genetic variation influences the connectivity and topology of human brain networks. We highlight recent evidence from twin and imaging genetics studies suggesting that the penetrance of candidate risk variants for mental illness, such as those in SLC6A4, MAOA, ZNF804A and APOE, may be higher for intermediate phenotypes characterised at the level of distributed neural systems than at the level of spatially localised brain regions. The findings indicate that imaging connectomics provides a powerful framework for understanding how genetic risk for psychiatric disease is expressed through altered structure and function of

  3. Color change, phenotypic plasticity, and camouflage

    Martin eStevens

    2016-01-01

    The ability to change appearance over a range of timescales is widespread in nature, existing in many invertebrate and vertebrate groups. This can include color change occurring in seconds, minutes, and hours, to longer term changes associated with phenotypic plasticity and development. A major function is for camouflage against predators because color change and plasticity enables animals to match their surroundings and potentially reduce the risk of predation. Recently, we published finding...

  4. Covert Genetic Selections to Optimize Phenotypes

    Wu, Di; Townsley, Elizabeth; Tartakoff, Alan Michael

    2007-01-01

    In many high complexity systems (cells, organisms, institutions, societies, economies, etc.), it is unclear which components should be regulated to affect overall performance. To identify and prioritize molecular targets which impact cellular phenotypes, we have developed a selection procedure (“SPI”–single promoting/inhibiting target identification) which monitors the abundance of ectopic cDNAs. We have used this approach to identify growth regulators. For this purpose, complex pools of S. c...

  5. Phenotypic impact of genomic structural variation

    Weischenfeldt, Joachim; Symmons, Orsolya; Spitz, François;

    2013-01-01

    Genomic structural variants have long been implicated in phenotypic diversity and human disease, but dissecting the mechanisms by which they exert their functional impact has proven elusive. Recently however, developments in high-throughput DNA sequencing and chromosomal engineering technology have...... delineating disease-causing elements that are affected by structural variants, and we discuss future directions for research on the functional consequences of structural variants....

  6. Mutator phenotypes due to DNA replication infidelity

    Arana, Mercedes E.; Kunkel, Thomas A.

    2010-01-01

    This article considers the fidelity of DNA replication performed by eukaryotic DNA polymerases involved in replicating the nuclear genome. DNA replication fidelity can vary widely depending on the DNA polymerase, the composition of the error, the flanking sequence, the presence of DNA damage and the ability to correct errors. As a consequence, defects in processes that determine DNA replication fidelity can confer strong mutator phenotypes whose specificity can help determine the molecular na...

  7. Innate lymphocyte cells in asthma phenotypes

    Ozyigit, Leyla Pur; MORITA, Hideaki; Akdis, Mubeccel

    2015-01-01

    T helper type 2 (TH2) cells were previously thought to be the main initiating effector cell type in asthma; however, exaggerated TH2 cell activities alone were insufficient to explain all aspects of asthma. Asthma is a heterogeneous syndrome comprising different phenotypes that are characterized by their different clinical features, treatment responses, and inflammation patterns. The most-studied subgroups of asthma include TH2-associated early-onset allergic asthma, late-onset persistent eos...

  8. Lung cancer stem cells—characteristics, phenotype

    Hardavella, Georgia; George, Rachel; Sethi, Tariq

    2016-01-01

    Lung cancer remains a major cause of cancer-related deaths worldwide with unfavourable prognosis mainly due to the late stage of disease at presentation. High incidence and disease recurrence rates are a fact despite advances in treatment. Ongoing experimental and clinical observations suggest that the malignant phenotype in lung cancer is sustained by lung cancer stem cells (CSCs) which are putative stem cells situated throughout the airways that have the potential of initiating lung cancer ...

  9. Phenotype development in TgHD minipigs

    Ellederová, Zdeňka; Vidinská, Daniela; Mačáková, Monika; Kučerová, S.; Bohuslavová, Božena; Sedláčková, M.; Lišková, Irena; Valeková, Ivona; Baxa, Monika; Ardan, Taras; Juhás, Štefan; Motlík, Jan

    2015-01-01

    Roč. 78, Suppl 2 (2015), s. 11-11. ISSN 1210-7859. [Conference on Animal Models for neurodegenerative Diseases /3./. 08.11.2015-10.11.2015, Liblice] R&D Projects: GA MŠk ED2.1.00/03.0124; GA MŠk(CZ) 7F14308 Institutional support: RVO:67985904 Keywords : phenotype * minipig model of Huntington´s disease * reproductive failure Subject RIV: EB - Genetics ; Molecular Biology

  10. The Social Phenotype of Williams Syndrome

    Järvinen, Anna; Korenberg, Julie R; Bellugi, Ursula

    2013-01-01

    Williams syndrome (WS) offers an exciting model for social neuroscience because its genetic basis is well-defined, and the unique phenotype reflects dimensions of prosocial behaviors. WS is associated with a strong drive to approach strangers, a gregarious personality, heightened social engagement yet difficult peer interactions, high non-social anxiety, unusual bias toward positive affect, and diminished sensitivity to fear. New neurobiological evidence points toward alterations in structure...

  11. The common bipolar phenotype in young people

    Rock, Philippa L; Chandler, Rebecca A.; Harmer, Catherine J.; Rogers, Robert D.; Goodwin, Guy M.

    2013-01-01

    Background Mood elevation is common in adolescents and young adults. The aim of this study was to investigate the prevalence of a bipolar diagnosis and co-morbidity in individuals identified by online screening for experience of (hypo)manic symptoms in order to better define the common bipolar phenotype in young people. Methods Survey data regarding experience of (hypo)manic symptoms and occurrence of co-morbidities were analysed for 106 students satisfying criteria for probable bipolar syndr...

  12. Ottoman royal women's spaces: The acoustic dimension

    Ergin, Nina

    2014-01-01

    In their discussion of space in relation to gender, historians of women in the Middle East so far have focused primarily on physical and visual access. This paper argues that women's acoustic space merits closer consideration, especially since acoustic methods of communication very often could and did exceed the limits of vision and visually bounded space. This argument is based on three different case studies concerning Ottoman royal women of the sixteenth and seventeenth centuries: (1) hare...

  13. Estimating the variation, autocorrelation, and environmental sensitivity of phenotypic selection

    Chevin, Luis-Miguel; Visser, Marcel E.; Tufto, Jarle

    2015-01-01

    Despite considerable interest in temporal and spatial variation of phenotypic selection, very few methods allow quantifying this variation while correctly accounting for the error variance of each individual estimate. Furthermore, the available methods do not estimate the autocorrelation of phenotyp

  14. The SSC access shafts calculational study

    The SSC generic shaft requirements and access spacing are considered elsewhere. The shafts connecting the ground surface with the underground accelerator tunnel deliver to the surface some portion of the radiation created in the tunnel. The radiation safety problem of access shafts consists of two major questions: Does the dose equivalent at the ground surface exceed permissible limits? If it exceeds those limits, what additional shielding measures are required? A few works deal with this problem for high energy machines. This work is an attempt to answer these questions for the basic types of shafts specific to the SSC magnet delivery, utility and personnel shafts using full-scale Monte-Carlo calculations of the entire process from hadronic cascades in the lattice elements to particles scattered in the tunnel, niches, alcoves, shafts and surface bunkers and buildings. 9 refs., 16 figs., 1 tab

  15. Safety testing for LHC access system

    Valentini, F; Ninin, P; Scibile, S

    2008-01-01

    In the domain of Safety Real-Time Systems the problem of testing represents always a big effort in terms of time, costs and efficiency to guarantee an adequate coverage degree. Exhaustive tests may, in fact, not be practicable for large and distributed systems. This paper describes the testing process followed during the validation of the CERN's LHC Access System [1], responsible for monitoring and preventing physical risks for the personnel accessing the underground areas. In the paper we also present a novel strategy for the testing problem, intended to drastically reduce the time for the test patterns generation and execution. In particular, we propose a methodology for blackbox testing that relies on the application of Model Checking techniques. Model Checking is a formal method from computer science, commonly adopted to prove correctness of system’s models through an automatic system’s state space exploration against some property formulas.

  16. Expanding the phenotype of mosaic trisomy 20.

    Willis, Mary J H; Bird, Lynne M; Dell'Aquilla, Marie; Jones, Marilyn C

    2008-02-01

    Mosaic trisomy 20 is one of the more common cytogenetic abnormalities found on amniocentesis or chorionic villus sampling. Studies have shown that outcome is normal in 90-93% of prenatally diagnosed cases. There are however, reports in the literature of children with mosaic trisomy 20 described as having an assortment of dysmorphic features and varying levels of developmental delay. Unfortunately, the literature has not defined a specific phenotype for this entity. Here we report on three patients with mosaic trisomy 20, two of whom were identified prenatally. Over a number of years of follow-up it has become apparent that there are some striking similarities among the three. Comparison between our patients and the literature cases indicates a more consistent phenotype than has previously been suggested. Recurring features include; spinal abnormalities (including spinal stenosis, vertebral fusion, and kyphosis), hypotonia, lifelong constipation, sloped shoulders, and significant learning disabilities despite normal intelligence. These findings may be overlooked on routine history and physical exam or assumed to be standard pediatric problems. It is not our intention to suggest that there is a distinctive face for this entity but to suggest that a subtle phenotype does exist. We have attempted to identify a set of findings for which any child diagnosed with mosaic trisomy 20 should be assessed or followed even in the presence of an apparently normal physical exam at birth. PMID:18203170

  17. Dissecting phenotypic variation among AIS patients

    We have created genital skin fibroblast cell lines directly from three patients in a Chinese family affected by androgen insensitivity syndrome (AIS). All patients in the family share an identical AR Arg840Cys mutant but show different disease phenotypes. By using the cell lines, we find that the mutation has not influenced a normal androgen-binding capacity at 37 deg C but has reduced the affinity for androgens and may cause thermolability of the androgen-receptor complex. The impaired nuclear trafficking of the androgen receptor in the cell lines is highly correlated with the severity of donors' disease phenotype. The transactivity of the mutant is substantially weakened and the extent of the reduced transactivity reflects severity of the donors' disease symptom. Our data reveal that although etiology of AIS is monogenic and the mutant may alter the major biological functions of its wild allele, the function of the mutant AR can also be influenced by the different genetic backgrounds and thus explains the divergent disease phenotypes

  18. Reinforcing targeted therapeutics with phenotypic stability factors.

    Yaswen, Paul

    2014-01-01

    Deregulated cell cycle progression can often be traced to intrinsic defects in specific regulatory proteins in cancer cells. Knowledge of these primary defects has led to targeted approaches that exploit the defects and spare normal cells. However, the success of such targeted approaches is still hit-or-miss. Genetic and epigenetic variability inherent in most tumors often results in phenotypic heterogeneity that, in turn, results in de novo or acquired resistance to therapeutic agents. The ability of cells to compensate and adapt to the inhibition of a specific cell cycle mediator is not remarkable. What is novel and of great potential importance is that the ability of cells to exhibit such adaptability varies markedly. "Phenotypic stability factors" that restrict the ability of cells to undergo epithelial-mesenchymal transitions (EMT) may dictate the success or failure of targeted therapies by interfering with compensatory changes such as deregulation of CDK2 activity. Identification of existing and new agents that induce and maintain phenotypic stability factors will inform and enable synergistic approaches to the eradication of even the most aggressive tumors. PMID:25483053

  19. Phenotypic heterogeneity of monogenic frontotemporal dementia

    Barbara Borroni

    2015-09-01

    Full Text Available Frontotemporal dementia (FTD is a genetically and pathologically heterogeneous disorder characterized by personality changes, language impairment and deficits of executive functions associated with frontal and temporal lobe degeneration. Different phenotypes have been defined on the basis of presenting clinical symptoms, i.e. the behavioral variant of FTD (bvFTD, the agrammatic variant of Primary Progressive Aphasia (avPPA and the semantic variant of PPA (svPPA. Some patients have an associated movement disorder, either parkinsonism, as in Progressive Supranuclear Palsy (PSP and Corticobasal Syndrome (CBS, or motor neuron disease (FTD-MND. A family history of dementia is found in 40% of cases of FTD and about 10% have a clear autosomal dominant inheritance. Genetic studies have identified several genes associated to monogenic FTD: microtubule-associated protein tau (MAPT, progranulin (GRN, TAR DNA-binding protein 43 (TARBDP, valosin-containing protein (VCP, charged multivesicular body protein 2B (CHMP2B, fused in sarcoma (FUS and the hexanucleotide repeat expansion in intron 1 of the chromosome 9 open reading frame 72 (C9orf72. Patients often present with an extensive phenotypic variability, even among different members of the same kindred carrying an identical disease mutation. The objective of the present work is to review and evaluate available literature data in order to highlight recent advances in clinical, biological and neuroimaging features of monogenic frontotemporal lobar degeneration and try to identify different mechanisms underlying the extreme phenotypic heterogeneity that characterizes this disease.

  20. MPHASYS: a mouse phenotype analysis system

    Mian I

    2007-06-01

    Full Text Available Abstract Background Systematic, high-throughput studies of mouse phenotypes have been hampered by the inability to analyze individual animal data from a multitude of sources in an integrated manner. Studies generally make comparisons at the level of genotype or treatment thereby excluding associations that may be subtle or involve compound phenotypes. Additionally, the lack of integrated, standardized ontologies and methodologies for data exchange has inhibited scientific collaboration and discovery. Results Here we introduce a Mouse Phenotype Analysis System (MPHASYS, a platform for integrating data generated by studies of mouse models of human biology and disease such as aging and cancer. This computational platform is designed to provide a standardized methodology for working with animal data; a framework for data entry, analysis and sharing; and ontologies and methodologies for ensuring accurate data capture. We describe the tools that currently comprise MPHASYS, primarily ones related to mouse pathology, and outline its use in a study of individual animal-specific patterns of multiple pathology in mice harboring a specific germline mutation in the DNA repair and transcription-specific gene Xpd. Conclusion MPHASYS is a system for analyzing multiple data types from individual animals. It provides a framework for developing data analysis applications, and tools for collecting and distributing high-quality data. The software is platform independent and freely available under an open-source license 1.

  1. Phenotypic Variability in the Coccolithophore Emiliania huxleyi.

    Blanco-Ameijeiras, Sonia; Lebrato, Mario; Stoll, Heather M; Iglesias-Rodriguez, Debora; Müller, Marius N; Méndez-Vicente, Ana; Oschlies, Andreas

    2016-01-01

    Coccolithophores are a vital part of oceanic phytoplankton assemblages that produce organic matter and calcium carbonate (CaCO3) containing traces of other elements (i.e. Sr and Mg). Their associated carbon export from the euphotic zone to the oceans' interior plays a crucial role in CO2 feedback mechanisms and biogeochemical cycles. The coccolithophore Emiliania huxleyi has been widely studied as a model organism to understand physiological, biogeochemical, and ecological processes in marine sciences. Here, we show the inter-strain variability in physiological and biogeochemical traits in 13 strains of E. huxleyi from various biogeographical provinces obtained from culture collections commonly used in the literature. Our results demonstrate that inter-strain genetic variability has greater potential to induce larger phenotypic differences than the phenotypic plasticity of single strains cultured under a broad range of variable environmental conditions. The range of variation found in physiological parameters and calcite Sr:Ca highlights the need to reconsider phenotypic variability in paleoproxy calibrations and model parameterizations to adequately translate findings from single strain laboratory experiments to the real ocean. PMID:27348427

  2. Olfactory phenotypic expression unveils human aging

    Mazzatenta, Andrea; Cellerino, Alessandro; Origlia, Nicola; Barloscio, Davide; Sartucci, Ferdinando; Giulio, Camillo Di; Domenici, Luciano

    2016-01-01

    The mechanism of the natural aging of olfaction and its declinein the absence of any overt disease conditions remains unclear. Here, we investigated this mechanism through measurement of one of the parameters of olfactory function, the absolute threshold, in a healthy population from childhood to old age. The absolute olfactory threshold data were collected from an Italian observational study with 622 participants aged 5-105 years. A subjective testing procedure of constant stimuli was used, which was also compared to the ‘staircase’ method, with the calculation of the reliability. The n-butanol stimulus was used as an ascending series of nine molar concentrations that were monitored using an electronic nose. The data were analyzed using nonparametric statistics because of the multimodal distribution. We show that the age-related variations in the absolute olfactory threshold are not continuous; instead, there are multiple olfactory phenotypes. Three distinct age-related phenotypes were defined, termed as ‘juvenile’, ‘mature’ and ‘elder’. The frequency of these three phenotypes depends on age. Our data suggest that the sense of smell does not decrease linearly with aging. Our findings provide the basis for further understanding of olfactory loss as an anticipatory sign of aging and neurodegenerative processes. PMID:27027240

  3. Modeling spatial accessibility to parks: a national study

    Lu Hua

    2011-05-01

    Full Text Available Abstract Background Parks provide ideal open spaces for leisure-time physical activity and important venues to promote physical activity. The spatial configuration of parks, the number of parks and their spatial distribution across neighborhood areas or local regions, represents the basic park access potential for their residential populations. A new measure of spatial access to parks, population-weighted distance (PWD to parks, combines the advantages of current park access approaches and incorporates the information processing theory and probability access surface model to more accurately quantify residential population's potential spatial access to parks. Results The PWD was constructed at the basic level of US census geography - blocks - using US park and population data. This new measure of population park accessibility was aggregated to census tract, county, state and national levels. On average, US residential populations are expected to travel 6.7 miles to access their local neighborhood parks. There are significant differences in the PWD to local parks among states. The District of Columbia and Connecticut have the best access to local neighborhood parks with PWD of 0.6 miles and 1.8 miles, respectively. Alaska, Montana, and Wyoming have the largest PWDs of 62.0, 37.4, and 32.8 miles, respectively. Rural states in the western and Midwestern US have lower neighborhood park access, while urban states have relatively higher park access. Conclusions The PWD to parks provides a consistent platform for evaluating spatial equity of park access and linking with population health outcomes. It could be an informative evaluation tool for health professionals and policy makers. This new method could be applied to quantify geographic accessibility of other types of services or destinations, such as food, alcohol, and tobacco outlets.

  4. Investigating the Social Phenotype in Williams Syndrome: Methodological Challenges

    H. Tager Flusberg

    2009-01-01

    The earliest descriptions of individuals with WS remarked on their unusual sociability, interest and engagement with other people, especially strangers. For the past 15 years researchers have focused their investigations on elucidating this aspect of the WS phenotype addressing several key questions: Is the social phenotype unique to WS? How can we define the social phenotype of WS? What are the cognitive mechanisms that underlie the social phenotype? What is the neurobiological ba...

  5. Hormones and phenotypic plasticity: Implications for the evolution of integrated adaptive phenotypes

    Sean C.LEMA; Jun KITANO

    2013-01-01

    It is generally accepted that taxa exhibit genetic variation in phenotypic plasticity,but many questions remain unanswered about how divergent plastic responses evolve under dissimilar ecological conditions.Hormones are signaling molecules that act as proximate mediators of phenotype expression by regulating a variety of cellular,physiological,and behavioral responses.Hormones not only change cellular and physiological states but also influence gene expression directly or indirectly,thereby linking environmental conditions to phenotypic development.Studying how hormonal pathways respond to environmental variation and how those responses differ between individuals,populations,and species can expand our understanding of the evolution of phenotypic plasticity.Here,we explore the ways that the study of hormone signaling is providing new insights into the underlying proximate bases for individual,population or species variation in plasticity.Using several studies as exemplars,we examine how a 'norm of reaction' approach can be used in investigations of hormone-mediated plasticity to inform the following:1) how environmental cues affect the component hormones,receptors and enzymes that comprise any endocrine signaling pathway,2) how genetic and epigenetic variation in endocrine-associated genes can generate variation in plasticity among these diverse components,and 3) how phenotypes mediated by the same hormone can be coupled and decoupled via independent plastic responses of signaling components across target tissues.Future studies that apply approaches such as reaction norms and network modeling to questions concerning how hormones link environmental stimuli to ecologically-relevant phenotypic responses should help unravel how phenotypic plasticity evolves.

  6. Anonymous Biometric Access Control

    Shuiming Ye

    2009-01-01

    Full Text Available Access control systems using the latest biometric technologies can offer a higher level of security than conventional password-based systems. Their widespread deployments, however, can severely undermine individuals' rights of privacy. Biometric signals are immutable and can be exploited to associate individuals' identities to sensitive personal records across disparate databases. In this paper, we propose the Anonymous Biometric Access Control (ABAC system to protect user anonymity. The ABAC system uses novel Homomorphic Encryption (HE based protocols to verify membership of a user without knowing his/her true identity. To make HE-based protocols scalable to large biometric databases, we propose the k-Anonymous Quantization (kAQ framework that provides an effective and secure tradeoff of privacy and complexity. kAQ limits server's knowledge of the user to k maximally dissimilar candidates in the database, where k controls the amount of complexity-privacy tradeoff. kAQ is realized by a constant-time table lookup to identity the k candidates followed by a HE-based matching protocol applied only on these candidates. The maximal dissimilarity protects privacy by destroying any similarity patterns among the returned candidates. Experimental results on iris biometrics demonstrate the validity of our framework and illustrate a practical implementation of an anonymous biometric system.

  7. Compressed random access memory

    Jansson, Jesper; Sung, Wing-Kin

    2010-01-01

    Motivated by applications which need to store huge amounts of data in the main memory of a computer, this paper proposes a new dynamic data-structure for compressed random access memory. Ferragina and Venturini [SODA 2007, TCS 2007] recently gave a compressed data-structure for storing a string that allows substrings to be retrieved efficiently, but it requires the string to be static. Here, we extend their results in a non-trivial way to also allow the stored compressed string to be modified during execution. Our results are as follows. A memory (or string) $T[1..n]$, where each character $T[i]$ is of $\\log\\sigma$ bits, can be stored in $n H_k(T) + O(n \\log \\sigma \\frac{(k+1) (\\log \\sigma +\\log \\log n)}{\\log n})$ bits, where $H_k(T)$ is the $k$-th order empirical entropy of $T$, such that (1) accessing $T[i..j]$ takes optimal $O(1 + (j-i) / \\log_{\\sigma} n)$ time and (2) replacing $T[i..i+\\log_{\\sigma} n - 1]$ by another string of length $\\log_{\\sigma} n$ takes $O(\\log n/\\log\\log n)$ time. We can also suppor...

  8. Accessibility and inclusion informational

    Mônica Sena de Souza

    2013-06-01

    Full Text Available Introduction: Discusses the role of information professionals in meeting the informational demands of people with disabilities in the information society. The librarian is crucial for the effectiveness and success in the informational inclusion of people with disabilities, considering also continuing education for their professional qualification.Objective: To provide reflections on the role of the librarian in serving users with disabilities, highlighting the need for improvement in information units, identified in the scientific literature with regard to accessibility.Methodology: Literature search, based on a review of literature in books and scientific papers, highlighting the main authors: Adams (2000, Mazzoni (2001 and Sassaki (1997, 2002, 2005.Results: The lack of informational access for people with disabilities hampers their social and political participation, hence, reduces its condition of citizenship.Conclusion: The librarian responsible for seeking continuing education, greater involvement in the events of the area and the constant search for job training, which will reflect on the best service the information needs of users with disabilities.

  9. Art : accessible, renewable technology

    This paper focuses on the role of non-governmental organization (NGO) citizen groups in Ontario in the use and production of electricity. NGOs have the potential to act both directly on their own accord, and indirectly by pressuring government and others. Current demand for electricity is divided between industrial, commercial and residential users. Citizens have an important role to play in reducing energy demand. On the supply side, there is a revival of interest in renewable energy based on wind, photovoltaic and local-hydro technologies as a result of the escalating environmental and economic costs of coal and nuclear generation. However, citizen groups have greater interest and enthusiasm than technical expertise, creating a mismatch between technological solutions and human need or use of them. This paper discusses how this mismatch applies to renewable-energy technologies, many of which are not especially user-friendly, or accessible. While alternative technologies are increasingly welcomed by government, industry is developing a large and growing array of technological devices. In between this is the citizen, who, despite keen interest, can be overwhelmed by the complexity of the situation. This paper links the theoretical perspective to the real world with a discussion of the dynamics between people and renewable energy in citizen groups and makes particular reference to one group, Citizens for Renewable Energy, that has been making renewable energy technology more accessible to its members for over a decade

  10. Access to legal abortion.

    1993-10-01

    Countries are grouped by the nature and extent of access to legal abortion. The categories include abortion on demand, for social reasons, for health reasons, for rape or incest or to save a mother's life, and only to save a mother's life. Abortion on demand is available for about 40% of the world's population and may have restrictions, such as parental consent or approval of state committees or physicians. There are 22 countries in Europe, 12 in the former Soviet Union, four in Asia, four in the Americas, one in the Middle East (Turkey), and one in Africa (Tunisia) which provide access to early abortion on demand. Abortion for social and economic reasons is available to 21% of the world's population in five countries in Asia, three in Europe (Great Britain, Finland, and Hungary), and one in Africa (Zambia). Abortion for health reasons is available to 16% of the world's population located in 21 countries in Africa, eight in the Americas, seven in Asia, five in Europe, and four in the Middle East. Laws governing about 5% of the world's population permit abortion only in the case of rape, incest, or when a mother's life is in danger (Brazil, Mexico, and Sudan). 18% of the world's population is covered by laws which permit an abortion only when a mother's life is in danger; this includes 19 countries in Africa, 11 in the Americas, nine in Asia, seven in the Middle East, and one in Europe (Ireland). PMID:12287145

  11. Riesz spaces

    Zaanen, A C

    1983-01-01

    While Volume I (by W.A.J. Luxemburg and A.C. Zaanen, NHML Volume 1, 1971) is devoted to the algebraic aspects of the theory, this volume emphasizes the analytical theory of Riesz spaces and operators between these spaces. Though the numbering of chapters continues on from the first volume, this does not imply that everything covered in Volume I is required for this volume, however the two volumes are to some extent complementary.

  12. Myelin alters the inflammatory phenotype of macrophages by activating PPARs

    Bogie, Jeroen; Jorissen, Winde; Mailleux, Jo; Vanmierlo, Tim; van Horssen, Jack; Hellings, Niels; Stinissen, Piet; Hendriks, J. J. A.; Nijland, Philip G.; Zelcer, Noam

    2013-01-01

    Background Foamy macrophages, containing myelin degradation products, are abundantly found in active multiple sclerosis (MS) lesions. Recent studies have described an altered phenotype of macrophages after myelin internalization. However, mechanisms by which myelin affects the phenotype of macrophages and how this phenotype influences lesion progression remain unclear. Results We demonstrate that myelin as well as phosphatidylserine (PS), a phospholipid found in myelin, reduce nitri...

  13. Phenotypic robustness and the assortativity signature of human transcription factor networks.

    Dov A Pechenick

    2014-08-01

    Full Text Available Many developmental, physiological, and behavioral processes depend on the precise expression of genes in space and time. Such spatiotemporal gene expression phenotypes arise from the binding of sequence-specific transcription factors (TFs to DNA, and from the regulation of nearby genes that such binding causes. These nearby genes may themselves encode TFs, giving rise to a transcription factor network (TFN, wherein nodes represent TFs and directed edges denote regulatory interactions between TFs. Computational studies have linked several topological properties of TFNs - such as their degree distribution - with the robustness of a TFN's gene expression phenotype to genetic and environmental perturbation. Another important topological property is assortativity, which measures the tendency of nodes with similar numbers of edges to connect. In directed networks, assortativity comprises four distinct components that collectively form an assortativity signature. We know very little about how a TFN's assortativity signature affects the robustness of its gene expression phenotype to perturbation. While recent theoretical results suggest that increasing one specific component of a TFN's assortativity signature leads to increased phenotypic robustness, the biological context of this finding is currently limited because the assortativity signatures of real-world TFNs have not been characterized. It is therefore unclear whether these earlier theoretical findings are biologically relevant. Moreover, it is not known how the other three components of the assortativity signature contribute to the phenotypic robustness of TFNs. Here, we use publicly available DNaseI-seq data to measure the assortativity signatures of genome-wide TFNs in 41 distinct human cell and tissue types. We find that all TFNs share a common assortativity signature and that this signature confers phenotypic robustness to model TFNs. Lastly, we determine the extent to which each of the four

  14. Phenotypic robustness and the assortativity signature of human transcription factor networks.

    Pechenick, Dov A; Payne, Joshua L; Moore, Jason H

    2014-08-01

    Many developmental, physiological, and behavioral processes depend on the precise expression of genes in space and time. Such spatiotemporal gene expression phenotypes arise from the binding of sequence-specific transcription factors (TFs) to DNA, and from the regulation of nearby genes that such binding causes. These nearby genes may themselves encode TFs, giving rise to a transcription factor network (TFN), wherein nodes represent TFs and directed edges denote regulatory interactions between TFs. Computational studies have linked several topological properties of TFNs - such as their degree distribution - with the robustness of a TFN's gene expression phenotype to genetic and environmental perturbation. Another important topological property is assortativity, which measures the tendency of nodes with similar numbers of edges to connect. In directed networks, assortativity comprises four distinct components that collectively form an assortativity signature. We know very little about how a TFN's assortativity signature affects the robustness of its gene expression phenotype to perturbation. While recent theoretical results suggest that increasing one specific component of a TFN's assortativity signature leads to increased phenotypic robustness, the biological context of this finding is currently limited because the assortativity signatures of real-world TFNs have not been characterized. It is therefore unclear whether these earlier theoretical findings are biologically relevant. Moreover, it is not known how the other three components of the assortativity signature contribute to the phenotypic robustness of TFNs. Here, we use publicly available DNaseI-seq data to measure the assortativity signatures of genome-wide TFNs in 41 distinct human cell and tissue types. We find that all TFNs share a common assortativity signature and that this signature confers phenotypic robustness to model TFNs. Lastly, we determine the extent to which each of the four components of the

  15. Characterization of an alcohol addiction-prone phenotype in mice.

    Radwanska, Kasia; Kaczmarek, Leszek

    2012-05-01

    Human studies indicate that high impulsivity, novelty seeking and anxiety predispose individuals to alcohol abuse. Unclear, however, is whether the same phenotypes can be observed in laboratory animals prone to uncontrolled alcohol drinking. To characterize a novelty-seeking trait, anxiety, impulsivity, compulsivity and the motivation for natural rewards in mice, numerous tests were performed in the automated IntelliCage learning system. The same mice then had extended access to alcohol for 70 days, followed by the evaluation of addiction-like behaviors, including (1) the motivation for alcohol in a progressive-ratio schedule of reinforcement; (2) persistent and compulsive alcohol seeking and taking during signaled 'no alcohol' periods and (3) when subjected to punishment; and (4) the intensity of relapse after alcohol withdrawal. Our data suggest that high levels of anxiety-related traits (i.e. low novelty seeking, low resistance to punishment and a high level of compulsive behaviors) and high impulsivity predict addiction-like alcohol drinking in mice. Future studies are, however, warranted to create a valid model of alcohol addiction in mice in the IntelliCage system. PMID:22017485

  16. Design of Biomedical Robots for Phenotype Prediction Problems.

    deAndrés-Galiana, Enrique J; Fernández-Martínez, Juan Luis; Sonis, Stephen T

    2016-08-01

    Genomics has been used with varying degrees of success in the context of drug discovery and in defining mechanisms of action for diseases like cancer and neurodegenerative and rare diseases in the quest for orphan drugs. To improve its utility, accuracy, and cost-effectiveness optimization of analytical methods, especially those that translate to clinically relevant outcomes, is critical. Here we define a novel tool for genomic analysis termed a biomedical robot in order to improve phenotype prediction, identifying disease pathogenesis and significantly defining therapeutic targets. Biomedical robot analytics differ from historical methods in that they are based on melding feature selection methods and ensemble learning techniques. The biomedical robot mathematically exploits the structure of the uncertainty space of any classification problem conceived as an ill-posed optimization problem. Given a classifier, there exist different equivalent small-scale genetic signatures that provide similar predictive accuracies. We perform the sensitivity analysis to noise of the biomedical robot concept using synthetic microarrays perturbed by different kinds of noises in expression and class assignment. Finally, we show the application of this concept to the analysis of different diseases, inferring the pathways and the correlation networks. The final aim of a biomedical robot is to improve knowledge discovery and provide decision systems to optimize diagnosis, treatment, and prognosis. This analysis shows that the biomedical robots are robust against different kinds of noises and particularly to a wrong class assignment of the samples. Assessing the uncertainty that is inherent to any phenotype prediction problem is the right way to address this kind of problem. PMID:27347715

  17. 2D Accessibility Analysis for Water Jet Cleaning

    Li, Wei; Garg, Saurabh; McMains, Sara

    2009-01-01

    Effective cleaning with high pressure waterjets requires direct impact of jets and sufficiently high impact pressure. The objective of this research is to find all such cleanable regions, given a CAD model of a workpiece, by means of geometric accessibility analysis. We use a configuration space (C-space) approach for addressing the problems of both optimum surface proximity for effective cleaning and collision avoidance between the cleaning lance and the workpiece. Minkowski sums are used ...

  18. The gray phenotype and tristable phenotypic transitions in the human fungal pathogen Candida tropicalis.

    Zhang, Yulong; Tao, Li; Zhang, Qiuyu; Guan, Guobo; Nobile, Clarissa J; Zheng, Qiushi; Ding, Xuefen; Huang, Guanghua

    2016-08-01

    Phenotypic plasticity, the ability to switch between different morphological types, plays critical roles in environmental adaptation, leading to infections, and allowing for sexual reproduction in pathogenic Candida species. Candida tropicalis, which is both an emerging human fungal pathogen and an environmental fungus, can switch between two heritable cell types termed white and opaque. In this study, we report the discovery of a novel phenotype in C. tropicalis, named the gray phenotype. Similar to Candida albicans and Candida dubliniensis, white, gray, and opaque cell types of C. tropicalis also form a tristable switching system, where gray cells are relatively small and elongated. In C. tropicalis, gray cells exhibit intermediate levels of mating competency and virulence in a mouse systemic infection model compared to the white and opaque cell types, express a set of cell type-enriched genes, and exhibit both common and species-specific biological features. The key regulators of white-opaque transitions, Wor1 and Efg1, are not required for the gray phenotype. A comparative study of the gray phenotypes in C. tropicalis, C. albicans, and C. dubliniensis provides clues to explain the virulence properties and niche preferences of C. tropicalis. PMID:27246518

  19. Significance of Lewis Phenotyping Using Saliva and Gastric Tissue: Comparison with the Lewis Phenotype Inferred from Lewis and Secretor Genotypes

    Yun Ji Hong; Sang Mee Hwang; Taek Soo Kim; Eun Young Song; Kyoung Un Park; Junghan Song; Kyou-Sup Han

    2014-01-01

    Lewis phenotypes using various types of specimen were compared with the Lewis phenotype predicted from Lewis and Secretor genotypes. This is the first logical step in explaining the association between the Lewis expression and Helicobacter pylori. We performed a study of the followings on 209 patients who underwent routine gastroscopy: erythrocyte and saliva Lewis phenotyping, gastric Lewis phenotyping by the tissue array, and the Lewis and Secretor genes genotyping. The results of phenotypin...

  20. public spaces

    Elena Grigoryeva

    2013-01-01

    Full Text Available The topic of this issue is PUBLIC SPACES. It is familiar and clear to every citizen. The streets and courtyards as childhood experiences remain with us forever. And these are the places where we come with our parents at weekends, where we meet friends, where we have dates and where we already come for a walk with our children.The history of public spaces is long and captivating. It was the main city squares where the most important events took place in history. The Agoras of Ancient Greece and the Roman Forums, the squares of Vatican, Paris and London, Moscow and Saint Petersburg… Greve, Trafalgar, Senate, Palace, Red, Bolotnaya – behind every name there is life of capitals, countries and nations.Public spaces, their shapes, image and development greatly influence the perception of the city as a whole. Both visitors and inhabitants can see in public spaces not only the visage but the heart, the soul and the mind of the city.Unfortunately, sometimes we have to prove the value of public spaces and defend them from those who consider them nothing but a blank space, nobody’s land destined for barbarous development.What should happen to make citizens perceive public spaces as their own and to make authorities consider development and maintenance of squares and parks their priority task against the  background of increasing competition between cities and the fight for human capital? Lately they more often say about “a high-quality human capital”. And now, when they say “the city should be liveable” they add “for all groups of citizens, including the creative class”.

  1. Underground spaces/cybernetic spaces

    Tomaž Novljan

    2000-01-01

    Full Text Available A modern city space is a space where in the vertical and horizontal direction dynamic, non-linear processes exist, similar as in nature. Alongside the “common” city surface, cities have underground spaces as well that are increasingly affecting the functioning of the former. It is the space of material and cybernetic communication/transport. The psychophysical specifics of using underground places have an important role in their conceptualisation. The most evident facts being their limited volume and often limited connections to the surface and increased level of potential dangers of all kinds. An efficient mode for alleviating the effects of these specific features are artistic interventions, such as: shape, colour, lighting, all applications of the basic principles of fractal theory.

  2. Associations between nitric oxide synthase genes and exhaled NO-related phenotypes according to asthma status.

    Emmanuelle Bouzigon

    Full Text Available BACKGROUND: The nitric oxide (NO pathway is involved in asthma, and eosinophils participate in the regulation of the NO pool in pulmonary tissues. We investigated associations between single nucleotide polymorphisms (SNPs of NO synthase genes (NOS and biological NO-related phenotypes measured in two compartments (exhaled breath condensate and plasma and blood eosinophil counts. METHODOLOGY: SNPs (N = 121 belonging to NOS1, NOS2 and NOS3 genes were genotyped in 1277 adults from the French Epidemiological study on the Genetics and Environment of Asthma (EGEA. Association analyses were conducted on four quantitative phenotypes: the exhaled fraction of NO (Fe(NO, plasma and exhaled breath condensate (EBC nitrite-nitrate levels (NO2-NO3 and blood eosinophils in asthmatics and non-asthmatics separately. Genetic heterogeneity of these phenotypes between asthmatics and non-asthmatics was also investigated. PRINCIPAL FINDINGS: In non-asthmatics, after correction for multiple comparisons, we found significant associations of Fe(NO levels with three SNPs in NOS3 and NOS2 (P ≤ 0.002, and of EBC NO2-NO3 level with NOS2 (P = 0.002. In asthmatics, a single significant association was detected between Fe(NO levels and one SNP in NOS3 (P = 0.004. Moreover, there was significant heterogeneity of NOS3 SNP effect on Fe(NO between asthmatics and non-asthmatics (P = 0.0002 to 0.005. No significant association was found between any SNP and NO2-NO3 plasma levels or blood eosinophil counts. CONCLUSIONS: Variants in NO synthase genes influence Fe(NO and EBC NO2-NO3 levels in adults. These genetic determinants differ according to asthma status. Significant associations were only detected for exhaled phenotypes, highlighting the critical relevance to have access to specific phenotypes measured in relevant biological fluid.

  3. Ontological Discovery Environment: a system for integrating gene-phenotype associations.

    Baker, Erich J; Jay, Jeremy J; Philip, Vivek M; Zhang, Yun; Li, Zuopan; Kirova, Roumyana; Langston, Michael A; Chesler, Elissa J

    2009-12-01

    The wealth of genomic technologies has enabled biologists to rapidly ascribe phenotypic characters to biological substrates. Central to effective biological investigation is the operational definition of the process under investigation. We propose an elucidation of categories of biological characters, including disease relevant traits, based on natural endogenous processes and experimentally observed biological networks, pathways and systems rather than on externally manifested constructs and current semantics such as disease names and processes. The Ontological Discovery Environment (ODE) is an Internet accessible resource for the storage, sharing, retrieval and analysis of phenotype-centered genomic data sets across species and experimental model systems. Any type of data set representing gene-phenotype relationships, such quantitative trait loci (QTL) positional candidates, literature reviews, microarray experiments, ontological or even meta-data, may serve as inputs. To demonstrate a use case leveraging the homology capabilities of ODE and its ability to synthesize diverse data sets, we conducted an analysis of genomic studies related to alcoholism. The core of ODE's gene set similarity, distance and hierarchical analysis is the creation of a bipartite network of gene-phenotype relations, a unique discrete graph approach to analysis that enables set-set matching of non-referential data. Gene sets are annotated with several levels of metadata, including community ontologies, while gene set translations compare models across species. Computationally derived gene sets are integrated into hierarchical trees based on gene-derived phenotype interdependencies. Automated set identifications are augmented by statistical tools which enable users to interpret the confidence of modeled results. This approach allows data integration and hypothesis discovery across multiple experimental contexts, regardless of the face similarity and semantic annotation of the experimental

  4. Cyclebase 3.0: a multi-organism database on cell-cycle regulation and phenotypes

    Santos Delgado, Alberto; Wernersson, Rasmus; Jensen, Lars Juhl

    2015-01-01

    Cyclebase version 3.0, we have updated the content of the database to reflect changes to genome annotation, added new mRNAand protein expression data, and integrated cell-cycle phenotype information from high-content screens and model-organism databases. The new version of Cyclebase also features a new web...... are not easily accessed, analyzed and combined due to their inherent heterogeneity. To address this, we have created Cyclebase-available at http://www.cyclebase.org-an online database that allows users to easily visualize and download results from genome-wide cell-cycle-related experiments. In...

  5. Novel MASP1 mutations are associated with an expanded phenotype in 3MC1 syndrome

    Kayserili Karabey, Hülya; Tahir Atik; Asuman Koparir; Guney Bademci; Joseph Foster II; Umut Altunoglu; Gül Yesiltepe Mutlu; Sarah Bowdin; Nursel Elcioglu; Gulsen A. Tayfun; Sevinc Sahin Atik; Mustafa Ozen; Ferda Ozkinay; Yasemin Alanay; Steffen Thiel and Mustafa Tekin

    2015-01-01

    RESEARCH Open Access Novel MASP1 mutations are associated with an expanded phenotype in 3MC1 syndrome Tahir Atik1,2†, Asuman Koparir3†, Guney Bademci1, Joseph Foster II1, Umut Altunoglu4, Gül Yesiltepe Mutlu5, Sarah Bowdin6, Nursel Elcioglu7, Gulsen A. Tayfun7, Sevinc Sahin Atik8, Mustafa Ozen3,9, Ferda Ozkinay2, Yasemin Alanay10, Hulya Kayserili4,11, Steffen Thiel12 and Mustafa Tekin1* Abstract Background: 3MC1 syndrome is a rare autosomal recessive disorder characterize...

  6. Significance of Lewis phenotyping using saliva and gastric tissue: comparison with the Lewis phenotype inferred from Lewis and secretor genotypes.

    Hong, Yun Ji; Hwang, Sang Mee; Kim, Taek Soo; Song, Eun Young; Park, Kyoung Un; Song, Junghan; Han, Kyou-Sup

    2014-01-01

    Lewis phenotypes using various types of specimen were compared with the Lewis phenotype predicted from Lewis and Secretor genotypes. This is the first logical step in explaining the association between the Lewis expression and Helicobacter pylori. We performed a study of the followings on 209 patients who underwent routine gastroscopy: erythrocyte and saliva Lewis phenotyping, gastric Lewis phenotyping by the tissue array, and the Lewis and Secretor genes genotyping. The results of phenotyping were as follows [Le(a-b-), Le(a+b-), Le(a-b+), and Le(a+b+), respectively, in order]: erythrocyte (12.4%, 25.8%, 61.2%, and 0.5%); saliva (2.4%, 27.3%, 70.3%, and 0.0%); gastric mucosa (8.1%, 6.7%, 45.5%, and 39.7%). The frequency of Le, le (59/508) , le (59/1067) , and le (59) alleles was 74.6%, 21.3%, 3.1%, and 1.0%, respectively, among 418 alleles. The saliva Lewis phenotype was completely consistent with the Lewis phenotype inferred from Lewis and Secretor genotypes, but that of gastric mucosa could not be predicted from genotypes. Lewis phenotyping using erythrocytes is only adequate for transfusion needs. Saliva testing for the Lewis phenotype is a more reliable method for determining the peripheral Lewis phenotype of an individual and the gastric Lewis phenotype must be used for the study on the association between Helicobacter pylori and the Lewis phenotype. PMID:24783214

  7. Plant phenomics and the need for physiological phenotyping across scales to narrow the genotype-to-phenotype knowledge gap

    Grosskinsky, D. K.; Svensgaard, J.; Christensen, S.; Roitsch, Thomas

    2015-01-01

    Roč. 66, č. 18 (2015), s. 5429-5440. ISSN 0022-0957 Institutional support: RVO:67179843 Keywords : External phenotype * genome –environment–management interaction * genome –phenome map * internal phenotype * phenomics * physiological traits * physiology * plant phenotyping * predictors Subject RIV: EH - Ecology, Behaviour Impact factor: 5.526, year: 2014

  8. A quantum access network

    Fröhlich, Bernd; Lucamarini, Marco; Sharpe, Andrew W; Yuan, Zhiliang; Shields, Andrew J

    2013-01-01

    The theoretically proven security of quantum key distribution (QKD) could revolutionise how information exchange is protected in the future. Several field tests of QKD have proven it to be a reliable technology for cryptographic key exchange and have demonstrated nodal networks of point-to-point links. However, so far no convincing answer has been given to the question of how to extend the scope of QKD beyond niche applications in dedicated high security networks. Here we show that adopting simple and cost-effective telecommunication technologies to form a quantum access network can greatly expand the number of users in quantum networks and therefore vastly broaden their appeal. We are able to demonstrate that a high-speed single-photon detector positioned at the network node can be shared between up to 64 users, thereby significantly reducing the hardware requirements for each user added to the network. This shared receiver architecture removes one of the main obstacles restricting the widespread application...

  9. Accessibility Long Term Perspectives

    Kay Axhausen

    2008-11-01

    Full Text Available Improved accessibility and its correlate lower generalized cost of contact, travel and transport have been sought by dynamic human societies for their economic and social benefits through- out recorded history. The paper will reflect about this process at a number of different spatial and temporal scales based on a conceptual model. Looking back at European history, it will trace the interaction between Christaller's logic of local market areas and the idea of (low contact cost network cities. Focusing on Switzerland since 1950 it will show how network investment changed the relative distribution of population and employment and how this interacted with changes in the preferences of the travelers. Using a recent snapshot of how a substantial sample of Swiss maintain their social networks over often very large areas, it will try to answer the question of what will happen in the future, if the current trend of ever lower costs of contact will persist.

  10. Membrane accessibility of glutathione

    Garcia, Alvaro; Eljack, Nasma D; Sani, Marc-Antoine;

    2015-01-01

    Regulation of the ion pumping activity of the Na(+),K(+)-ATPase is crucial to the survival of animal cells. Recent evidence has suggested that the activity of the enzyme could be controlled by glutathionylation of cysteine residue 45 of the β-subunit. Crystal structures so far available indicate...... that this cysteine is in a transmembrane domain of the protein. Here we have analysed via fluorescence and NMR spectroscopy as well as molecular dynamics simulations whether glutathione is able to penetrate into the interior of a lipid membrane. No evidence for any penetration of glutathione into the...... membrane was found. Therefore, the most likely mechanism whereby the cysteine residue could become glutathionylated is via a loosening of the α-β subunit association, creating a hydrophilic passageway between them to allow access of glutathione to the cysteine residue. By such a mechanism...

  11. Access For All

    Andersen, Ove Kjeld; Hjulmand, Christian

    2005-01-01

    Approximately 30% of the Danish population has severe problems in reading everyday text. In the light of the increasing amount of text available on the Internet this poses a democratic challenge to ensure “equal access” to information. The Talking Internet service - Access For All (AFA) - offers...... a free Internet-based tool for reading aloud any marked text with a synthetic voice. The only requirements are a standard equipped PC running a recent Windows OS and an Internet connection. Experiences gathered from running the service for more than 28 months underline the viability of the concept....... There is a clear need for a free internet based Danish text-to-speech synthesizer. Furthermore, the current state of technology i.e. internet bandwidth, response time and server technology is sufficient for setting up an online automatic reading service that is used by steadily growing number of individuals...

  12. Access Request Trustworthiness in Weighted Access Control Framework

    WANG Lun-wei; LIAO Xiang-ke; WANG Huai-min

    2005-01-01

    Weighted factor is given to access control policies to express the importance of policy and its effect on access control decision. According to this weighted access control framework, a trustworthiness model for access request is also given. In this model, we give the measure of trustworthiness factor to access request, by using some idea of uncertainty reasoning of expert system, present and prove the parallel propagation formula of request trustworthiness factor among multiple policies, and get the final trustworthiness factor to decide whether authorizing. In this model, authorization decision is given according to the calculation of request trustworthiness factor, which is more understandable, more suitable for real requirement and more powerful for security enhancement than traditional methods. Meanwhile the finer access control granularity is another advantage.

  13. Spatiotemporal accessible solitons in fractional dimensions

    Zhong, Wei-Ping; Malomed, Boris A; Zhang, Yiqi; Huang, Tingwen

    2016-01-01

    We report solutions for solitons of the "accessible" type in globally nonlocal nonlinear media of fractional dimension (FD), viz., for self-trapped modes in the space of effective dimension $2spaces; in particular, it applies to excitons trapped in quantum wells.

  14. Spatiotemporal accessible solitons in fractional dimensions

    Zhong, Wei-Ping; Belić, Milivoj R.; Malomed, Boris A.; Zhang, Yiqi; Huang, Tingwen

    2016-07-01

    We report solutions for solitons of the "accessible" type in globally nonlocal nonlinear media of fractional dimension (FD), viz., for self-trapped modes in the space of effective dimension 2 strength is proportional to the total power of the wave field. The solutions are categorized by a combination of radial, orbital, and azimuthal quantum numbers (n ,l ,m ) . They feature coaxial sets of vortical and necklace-shaped rings of different orders, and can be exactly written in terms of special functions that include Gegenbauer polynomials, associated Laguerre polynomials, and associated Legendre functions. The validity of these solutions is verified by direct simulations. The model can be realized in various physical settings emulated by FD spaces; in particular, it applies to excitons trapped in quantum wells.

  15. Affordable In-Space Transportation

    Curtis, L. A.; VanDyke, M. K.; Lajoie, R. M.; Woodcock, G. R.

    1996-01-01

    Current and proposed launch systems will provide access to low-Earth orbit (LEO), and destinations beyond LEO, but the cost of delivering payloads will preclude the use of these services by many users. To develop and encourage revolutionary commercial utilization of geosynchronous orbit (GEO) and to provide an affordable means to continue NASA space science and exploration missions, the transportation costs to in-space destinations must be reduced. The principal objective of this study was to conceptually define three to four promising approaches to in-space transportation for delivery of satellites and other payloads, 3,000- to 10,000-lb class, to GEO destinations. This study established a methodology for evaluating in-space transportation systems based on life-cycle cost. The reusable concepts seemed to fare better in the evaluation than expendable, since a major driver in the life-cycle cost was the stage production cost.

  16. Applications of schedule-induced polydipsia in rodents for the study of an excessive ethanol intake phenotype

    Ford, Matthew M.

    2014-01-01

    Schedule-induced polydipsia (SIP) is generated by subjecting a highly motivated animal to a sub-optimal rate of food reinforcement while also providing access to a fluid. SIP is one of several adjunctive (or displacement) behaviors that are expressed in an exaggerated form that is deemed ‘excessive’. This feature makes SIP an attractive model for studying an excessive ethanol drinking phenotype in rodents. Multiple experimental variables are crucial for the full manifestation of adjunctive dr...

  17. Phenotypic characteristics of isolates of Aspergillus section Fumigati from different geographic origins and their relationships with genotypic characteristics

    del Rocío Reyes-Montes María

    2011-05-01

    Full Text Available Abstract Background Epidemiological studies worldwide have shown that A. fumigatus exhibits important phenotypic and genotypic diversity, and these findings have been of great importance in improving the diagnosis and treatment of diseases caused by this fungus. However, few studies have been carried out related to the epidemiology of this fungus in Latin America. This study´s aim is to report on the epidemiology of the fungus by analyzing the phenotypic variability of Aspergillus section Fumigati isolates from different Latin American countries and the relationship between this variability, the geographical origin and genotypic characteristics. Methods We analyzed the phenotypic characteristics (macro- and micromorphology, conidial size, vesicles size, antifungal susceptibility and thermotolerance at 28, 37 and 48°C of A. section Fumigati isolates from Mexico (MX, Argentina (AR, Peru (PE and France (FR. The results were analyzed using analysis of variance (ANOVA and Tukey's multiple comparison test to detect significant differences. Two dendrograms among isolates were obtained with UPGMA using the Euclidean distance index. One was drawn for phenotypic data, and the other for phenotypic and genotypic data. A PCoA was done for shown isolates in a space of reduced dimensionality. In order to determine the degree of association between the phenotypic and genotypic characteristics AFLP, we calculated the correlation between parwise Euclidean distance matrices of both data sets with the nonparametric Mantel test. Results No variability was found in the macromorphology of the studied isolates; however, the micromorphology and growth rate showed that the PE isolates grew at a faster rate and exhibited the widest vesicles in comparison to the isolates from MX, AR and FR. The dendrogram constructed with phenotypic data showed three distinct groups. The group I and II were formed with isolates from PE and FR, respectively, while group III was formed

  18. Invasion strategies in clonal aquatic plants: are phenotypic differences caused by phenotypic plasticity or local adaptation?

    Riis, Tenna; Lambertini, Carla; Olesen, Birgit; Clayton, John S.; Brix, Hans; Sorrell, Brian K.

    2010-01-01

    Background and Aims The successful spread of invasive plants in new environments is often linked to multiple introductions and a diverse gene pool that facilitates local adaptation to variable environmental conditions. For clonal plants, however, phenotypic plasticity may be equally important. Here the primary adaptive strategy in three non-native, clonally reproducing macrophytes (Egeria densa, Elodea canadensis and Lagarosiphon major) in New Zealand freshwaters were examined and an attempt was made to link observed differences in plant morphology to local variation in habitat conditions. Methods Field populations with a large phenotypic variety were sampled in a range of lakes and streams with different chemical and physical properties. The phenotypic plasticity of the species before and after cultivation was studied in a common garden growth experiment, and the genetic diversity of these same populations was also quantified. Key Results For all three species, greater variation in plant characteristics was found before they were grown in standardized conditions. Moreover, field populations displayed remarkably little genetic variation and there was little interaction between habitat conditions and plant morphological characteristics. Conclusions The results indicate that at the current stage of spread into New Zealand, the primary adaptive strategy of these three invasive macrophytes is phenotypic plasticity. However, while limited, the possibility that genetic diversity between populations may facilitate ecotypic differentiation in the future cannot be excluded. These results thus indicate that invasive clonal aquatic plants adapt to new introduced areas by phenotypic plasticity. Inorganic carbon, nitrogen and phosphorous were important in controlling plant size of E. canadensis and L. major, but no other relationships between plant characteristics and habitat conditions were apparent. This implies that within-species differences in plant size can be explained

  19. Space Telescopes

    Rigby, Jane R.

    2011-01-01

    The science of astronomy depends on modern-day temples called telescopes. Astronomers make pilgrimages to remote mountaintops where these large, intricate, precise machines gather light that rains down from the Universe. Bit, since Earth is a bright, turbulent planet, our finest telescopes are those that have been launched into the dark stillness of space. These space telescopes, named after heroes of astronomy (Hubble, Chandra, Spitzer, Herschel), are some of the best ideas our species has ever had. They show us, over 13 billion years of cosmic history, how galaxies and quasars evolve. They study planets orbiting other stars. They've helped us determine that 95% of the Universe is of unknown composition. In short, they tell us about our place in the Universe. The next step in this journey is the James Webb Space Telescope, being built by NASA, Europe, and Canada for a 2018 launch; Webb will reveal the first galaxies that ever formed.

  20. Environmental spaces

    Larsen, Henrik Gutzon

    Using the development of intergovernmental environmental cooperation in the Baltic Sea area as a concrete example, the aim of this study is to explore how the 'environment' in situations of environmental interdependence is identified and institutionalised as political-geographical objects....... 'Environmental interdependence' is to this end conceptualised as a tension between 'political spaces' of discrete state territories and 'environmental spaces' of spatially nested ecosystems. This tension between geographies of political separateness and environmental wholeness is the implicit or explicit basis...... for a large and varied literature. But in both its critical and problemsolving manifestations, this literature tends to naturalise the spatiality of environmental concerns: environmental spaces are generally taken for granted. On the suggestion that there is a subtle politics to the specification of...