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Sample records for 3-d fourier domain

  1. Real-time 3D Fourier-domain optical coherence tomography guided microvascular anastomosis

    Huang, Yong; Ibrahim, Zuhaib; Lee, W. P. A.; Brandacher, Gerald; Kang, Jin U.

    2013-03-01

    Vascular and microvascular anastomosis is considered to be the foundation of plastic and reconstructive surgery, hand surgery, transplant surgery, vascular surgery and cardiac surgery. In the last two decades innovative techniques, such as vascular coupling devices, thermo-reversible poloxamers and suture-less cuff have been introduced. Intra-operative surgical guidance using a surgical imaging modality that provides in-depth view and 3D imaging can improve outcome following both conventional and innovative anastomosis techniques. Optical coherence tomography (OCT) is a noninvasive high-resolution (micron level), high-speed, 3D imaging modality that has been adopted widely in biomedical and clinical applications. In this work we performed a proof-of-concept evaluation study of OCT as an assisted intraoperative and post-operative imaging modality for microvascular anastomosis of rodent femoral vessels. The OCT imaging modality provided lateral resolution of 12 μm and 3.0 μm axial resolution in air and 0.27 volume/s imaging speed, which could provide the surgeon with clearly visualized vessel lumen wall and suture needle position relative to the vessel during intraoperative imaging. Graphics processing unit (GPU) accelerated phase-resolved Doppler OCT (PRDOCT) imaging of the surgical site was performed as a post-operative evaluation of the anastomosed vessels and to visualize the blood flow and thrombus formation. This information could help surgeons improve surgical precision in this highly challenging anastomosis of rodent vessels with diameter less than 0.5 mm. Our imaging modality could not only detect accidental suture through the back wall of lumen but also promptly diagnose and predict thrombosis immediately after reperfusion. Hence, real-time OCT can assist in decision-making process intra-operatively and avoid post-operative complications.

  2. 3-D Printed Slit Nozzles for Fourier Transform Microwave Spectroscopy

    Dewberry, Chris; Mackenzie, Becca; Green, Susan; Leopold, Ken

    2015-06-01

    3-D printing is a new technology whose applications are only beginning to be explored. In this report, we describe the application of 3-D printing to the facile design and construction of supersonic nozzles. The efficacy of a variety of designs is assessed by examining rotational spectra OCS and Ar-OCS using a Fourier transform microwave spectrometer with tandem cavity and chirped-pulse capabilities. This work focuses primarily on the use of slit nozzles but other designs have been tested as well. New nozzles can be created for 0.50 or less each, and the ease and low cost should facilitate the optimization of nozzle performance (e.g., jet temperature or cluster size distribution) for the needs of any particular experiment.

  3. Subharmonic Fourier domain mode locking.

    Eigenwillig, Christoph M; Wieser, Wolfgang; Biedermann, Benjamin R; Huber, Robert

    2009-03-15

    We demonstrate a subharmonically Fourier domain mode-locked wavelength-swept laser source with a substantially reduced cavity fiber length. In contrast to a standard Fourier domain mode-locked configuration, light is recirculated repetitively in the delay line with the optical bandpass filter used as switch. The laser has a fundamental optical round trip frequency of 285 kHz and can be operated at integer fractions thereof (subharmonics). Sweep ranges up to 95 nm full width centred at 1317 nm are achieved at the 1/5th subharmonic. A maximum sensitivity of 116 dB and an axial resolution of 12 microm in air are measured at an average sweep power of 12 mW. A sensitivity roll-off of 11 dB over 4 mm and 25 dB over 10 mm is observed and optical coherence tomography imaging is demonstrated. Besides the advantage of a reduced fiber length, subharmonic Fourier domain mode locking (shFDML) enables simple scaling of the sweep speed by extracting light from the delay part of the resonator. A sweep rate of 570 kHz is achieved. Characteristic features of shFDML operation, such as power leakage during fly-back and cw breakthrough, are investigated. PMID:19282912

  4. Oversampling analysis in fractional Fourier domain

    ZHANG Feng; TAO Ran; WANG Yue

    2009-01-01

    Oversampling is widely used in practical applications of digital signal processing. As the fractional Fourier transform has been developed and applied in signal processing fields, it is necessary to consider the oversampling theorem in the fractional Fourier domain. In this paper, the oversampling theorem in the fractional Fourier domain is analyzed. The fractional Fourier spectral relation between the original oversampled sequence and its subsequences is derived first, and then the expression for exact reconstruction of the missing samples in terms of the subsequences is obtained. Moreover, by taking a chirp signal as an example, it is shown that, reconstruction of the missing samples in the oversampled signal Is suitable in the fractional Fourier domain for the signal whose time-frequency distribution has the minimum support in the fractional Fourier domain.

  5. Fourier phase in Fourier-domain optical coherence tomography

    Uttam, Shikhar; Liu, Yang

    2015-01-01

    Phase of an electromagnetic wave propagating through a sample-of-interest is well understood in the context of quantitative phase imaging in transmission-mode microscopy. In the past decade, Fourier-domain optical coherence tomography has been used to extend quantitative phase imaging to the reflection-mode. Unlike transmission-mode electromagnetic phase, however, the origin and characteristics of reflection-mode Fourier phase are poorly understood, especially in samples with a slowly varying...

  6. Spectral/Fourier Domain Optical Coherence Tomography

    de Boer, Johannes F.

    Optical coherence tomography is a low-coherence interferometric method for imaging of biological tissue [1, 2]. For more than a decade after its inception between 1988 and 1991, the dominant implementation has been time domain OCT (TD-OCT), in which the length of a reference arm is rapidly scanned. The first spectral or Fourier domain OCT (SD/FD-OCT) implementation was reported in 1995 [3]. In SD-OCT the reference arm is kept stationary, and the depth information is obtained by a Fourier transform of the spectrally resolved interference fringes in the detection arm of a Michelson interferometer. This approach has provided a significant advantage in signal-to-noise ratio (SNR), which despite reports as early as 1997 [4, 5] has taken about half a decade to be recognized fully by the OCT community in 2003 [6-8]. The first demonstration of SD-OCT for in vivo retinal imaging in 2002 [9] was followed by a full realization of the sensitivity advantage by video rate in vivo retinal imaging [10], including high-speed 3-D volumetric imaging [11], ultrahigh-resolution video rate imaging [12, 13], and Doppler blood flow determination in the human retina [14, 15]. The superior sensitivity of SD-OCT, combined with the lack of need for a fast mechanical scanning mechanism, has opened up the possibility of much faster scanning without loss of image quality and provided a paradigm shift from point sampling to volumetric mapping of biological tissue in vivo. The technology has been particularly promising for ophthalmology [16, 17]. In this chapter, the principles and system design considerations of SD-OCT will be discussed in more detail.

  7. A Tamed 3D Navier-Stokes Equation in Domains

    Zhang, Xicheng

    2008-01-01

    In this paper, we analyze a tamed 3D Navier-Stokes equation in uniform $C^2$-domains (not necessarily bounded), which obeys the scaling invariance principle, and prove the existence and uniqueness of strong solutions to this tamed equation. In particular, if there exists a bounded solution to the classical 3D Navier-Stokes equation, then this solution satisfies our tamed equation. Moreover, the existence of a global attractor for the tamed equation in bounded domains is also proved. As simple...

  8. Photonic crystal biosensor in spatial fourier domain

    Hallynck, Elewout; Bienstman, Peter

    2011-01-01

    We propose a photonic crystal biosensor, operating at a single wavelength, based on analysis of resonant guided modes in the spatial Fourier domain. Sensitivities of 65 degrees per RIU and more have been simulated.

  9. 3D viscous-spring artificial boundary in time domain

    Liu Jingbo; Du Yixin; Du Xiuli; Wang Zhenyu; Wu Jun

    2006-01-01

    After a brief review of studies on artificial boundaries in dynamic soil-structure interaction, a three-dimensional viscous-spring artificial boundary (VSAB) in the time domain is developed in this paper. First, the 3D VSAB equations in the normal and tangential directions are derived based on the elastic wave motion theory. Secondly, a numerical simulation technique of wave motion equations along with the VSAB condition in the time domain is studied. Finally, numerical examples of some classical elastic wave motion problems are presented and the results are compared with the associated theoretical solutions, demonstrating that high precision and adequate stability can be achieved by using the proposed 3D VSAB. The proposed 3D VSAB can be conveniently incorporated in the general finite element program, which is commonly used to study dynamic soil-structure interaction problems.

  10. Fast 3D shape measurement using Fourier transform profilometry without phase unwrapping

    Song, Kechen; Hu, Shaopeng; Wen, Xin; Yan, Yunhui

    2016-09-01

    This paper presents a novel, simple, yet fast 3D shape measurement method using Fourier transform profilometry. Different from the conventional Fourier transform profilometry, this proposed method introduces the binocular stereo vision and employs two image pairs (i.e., original image pairs and fringe image pairs) to restructure 3D shape. In this proposed method, instead of phase unwrapping algorithm, a coarse disparity map is adopted as a constraint condition to realize phase matching using wrapped phase. Since the local phase matching and sub-pixel disparity refinement are proposed to obtain high measuring accuracy, high-quality phase is not required. The validity of the proposed method is verified by experiments.

  11. Three-dimensional imaging using computer-generated holograms synthesized from 3-D Fourier spectra

    Yatagai, Toyohiko; Miura, Ken-ichi; Sando, Yusuke; Itoh, Masahide [University of Tsukba, Institute of Applied Physics, Tennoudai 1-1-1, Tsukuba, Ibaraki 305-8571 (Japan)], E-mail: yatagai@cc.utsunomiya-u.ac.jp

    2008-11-01

    Computer-generated holograms(CGHs) synthesized from projection images of real existing objects are considered. A series of projection images are recorded both vertically and horizontally with an incoherent light source and a color CCD. According to the principles of computer tomography(CT), the 3-D Fourier spectrum is calculated from several projection images of objects and the Fresnel CGH is synthesized using a part of the 3-D Fourier spectrum. This method has following advantages. At first, no-blur reconstructed images in any direction are obtained owing to two-dimensionally scanning in recording. Secondarily, since not interference fringes but simple projection images of objects are recorded, a coherent light source is not necessary. Moreover, when a color CCD is used in recording, it is easily possible to record and reconstruct colorful objects. Finally, we demonstrate reconstruction of biological objects.

  12. Three-dimensional imaging using computer-generated holograms synthesized from 3-D Fourier spectra

    Computer-generated holograms(CGHs) synthesized from projection images of real existing objects are considered. A series of projection images are recorded both vertically and horizontally with an incoherent light source and a color CCD. According to the principles of computer tomography(CT), the 3-D Fourier spectrum is calculated from several projection images of objects and the Fresnel CGH is synthesized using a part of the 3-D Fourier spectrum. This method has following advantages. At first, no-blur reconstructed images in any direction are obtained owing to two-dimensionally scanning in recording. Secondarily, since not interference fringes but simple projection images of objects are recorded, a coherent light source is not necessary. Moreover, when a color CCD is used in recording, it is easily possible to record and reconstruct colorful objects. Finally, we demonstrate reconstruction of biological objects.

  13. MULTIVARIATE FOURIER SERIES OVER A CLASS OF NON TENSOR-PRODUCT PARTITION DOMAINS

    Jiachang Sun

    2003-01-01

    This paper finds a way to extend the well-known Fourier methods, to so-called n+1directions partition domains in n-dimension. In particular, in 2-D and 3-D cases, westudy Fourier methods over 3-direction parallel hexagon partitions and 4-direction parallelparallelogram dodecahedron partitions, respectively. It has pointed that, the most conceptsand results of Fourier methods on tensor-product case, such as periodicity, orthogonality ofFourier basis system, partial sum of Fourier series and its approximation behavior, can bemoved on the new non tensor-product partition case.

  14. Fully 3D PET image reconstruction using a fourier preconditioned conjugate-gradient algorithm

    Since the data sizes in fully 3D PET imaging are very large, iterative image reconstruction algorithms must converge in very few iterations to be useful. One can improve the convergence rate of the conjugate-gradient (CG) algorithm by incorporating preconditioning operators that approximate the inverse of the Hessian of the objective function. If the 3D cylindrical PET geometry were not truncated at the ends, then the Hessian of the penalized least-squares objective function would be approximately shift-invariant, i.e. G'G would be nearly block-circulant, where G is the system matrix. We propose a Fourier preconditioner based on this shift-invariant approximation to the Hessian. Results show that this preconditioner significantly accelerates the convergence of the CG algorithm with only a small increase in computation

  15. Simulation domain size requirements for elastic response of 3D polycrystalline materials

    Ozturk, Tugce; Stein, Clayton; Pokharel, Reeju; Hefferan, Christopher; Tucker, Harris; Jha, Sushant; John, Reji; Lebensohn, Ricardo A.; Kenesei, Peter; Suter, Robert M.; Rollett, Anthony D.

    2016-01-01

    A fast Fourier transform (FFT) based spectral algorithm is used to compute the full field mechanical response of polycrystalline microstructures. The field distributions in a specific region are used to determine the sensitivity of the method to the number of surrounding grains through quantification of the divergence of the field values from the largest simulation domain, as successively smaller surrounding volumes are included in the simulation. The analysis considers a mapped 3D structure where the location of interest is taken to be a particular pair of surface grains that enclose a small fatigue crack, and synthetically created statistically representative microstructures to further investigate the effect of anisotropy, loading condition, loading direction, and texture. The synthetic structures are generated via DREAM3D and the measured material is a cyclically loaded, Ni-based, low solvus high refractory (LSHR) superalloy that was characterized via 3D high energy x-ray diffraction microscopy (HEDM). Point-wise comparison of distributions in the grain pairs shows that, in order to obtain a Pearson correlation coefficient larger than 99%, the domain must extend to at least the third nearest neighbor. For an elastic FFT calculation, the stress-strain distributions are not sensitive to the shape of the domain. The main result is that convergence can be specified in terms of the number of grains surrounding a region of interest.

  16. Spatial correlation in 3D MIMO channels using fourier coefficients of power spectrums

    Nadeem, Qurrat Ul Ain

    2015-03-01

    In this paper, an exact closed-form expression for the Spatial Correlation Function (SCF) is derived for the standardized three-dimensional (3D) multiple-input multiple-output (MIMO) channel. This novel SCF is developed for a uniform linear array of antennas with non-isotropic antenna patterns. The proposed method resorts to the spherical harmonic expansion (SHE) of plane waves and the trigonometric expansion of Legendre and associated Legendre polynomials to obtain a closed-form expression for the SCF for arbitrary angular distributions and antenna patterns. The resulting expression depends on the underlying angular distributions and antenna patterns through the Fourier Series (FS) coefficients of power azimuth and elevation spectrums. The novelty of the proposed method lies in the SCF being valid for any 3D propagation environment. Numerical results validate the proposed analytical expression and study the impact of angular spreads on the correlation. The derived SCF will help evaluate the performance of correlated 3D MIMO channels in the future. © 2015 IEEE.

  17. 3D Vectorial Time Domain Computational Integrated Photonics

    Kallman, J S; Bond, T C; Koning, J M; Stowell, M L

    2007-02-16

    The design of integrated photonic structures poses considerable challenges. 3D-Time-Domain design tools are fundamental in enabling technologies such as all-optical logic, photonic bandgap sensors, THz imaging, and fast radiation diagnostics. Such technologies are essential to LLNL and WFO sponsors for a broad range of applications: encryption for communications and surveillance sensors (NSA, NAI and IDIV/PAT); high density optical interconnects for high-performance computing (ASCI); high-bandwidth instrumentation for NIF diagnostics; micro-sensor development for weapon miniaturization within the Stockpile Stewardship and DNT programs; and applications within HSO for CBNP detection devices. While there exist a number of photonics simulation tools on the market, they primarily model devices of interest to the communications industry. We saw the need to extend our previous software to match the Laboratory's unique emerging needs. These include modeling novel material effects (such as those of radiation induced carrier concentrations on refractive index) and device configurations (RadTracker bulk optics with radiation induced details, Optical Logic edge emitting lasers with lateral optical inputs). In addition we foresaw significant advantages to expanding our own internal simulation codes: parallel supercomputing could be incorporated from the start, and the simulation source code would be accessible for modification and extension. This work addressed Engineering's Simulation Technology Focus Area, specifically photonics. Problems addressed from the Engineering roadmap of the time included modeling the Auston switch (an important THz source/receiver), modeling Vertical Cavity Surface Emitting Lasers (VCSELs, which had been envisioned as part of fast radiation sensors), and multi-scale modeling of optical systems (for a variety of applications). We proposed to develop novel techniques to numerically solve the 3D multi-scale propagation problem for both the

  18. Beamforming in Short Time Fractional Fourier Domain (FRFD

    Mostafa Rahmani

    2012-09-01

    Full Text Available This study aims to generate a model for the problem of beamforming in fractional Fourier domain, through which a general solution for obtaining weighted beamforming in fractional Fourier domain for different criteria might be delivered. In order to generate this model, a description of fractional delay concept is presented, through which the string vector in fractional Fourier domain is calculated and a model for beamforming in fractional Fourier domain is generated which is similar to that used for obtaining weighted beamforming in time domain for narrow-band signals. To complement our solution, a method for obtaining the optimal fractional domain as well as direction of arrival in optimal fractional Fourier domain.

  19. Direct fourier methods in 3D-reconstruction from cone-beam data

    The problem of 3D-reconstruction is encountered in both medical and industrial applications of X-ray tomography. A method able to utilize a complete set of projections complying with Tuys condition was proposed by Grangeat. His method is mathematically exact and consists of two distinct phases. In phase 1 cone-beam projection data are used to produce the derivative of the radon transform. In phase 2, after interpolation, the radon transform data are used to reconstruct the three-dimensional object function. To a large extent our method is an extension of the Grangeat method. Our aim is to reduce the computational complexity, i.e. to produce a faster method. The most taxing procedure during phase 1 is computation of line-integrals in the detector plane. By applying the direct Fourier method in reverse for this computation, we reduce the complexity of phase 1 from O(N4) to O(N3logN). Phase 2 can be performed either as a straight 3D-reconstruction or as a sequence of two 2D-reconstructions in vertical and horizontal planes, respectively. Direct Fourier methods can be applied for the 2D- and for the 3D-reconstruction, which reduces the complexity of phase 2 from O(N4) to O(N3logN) as well. In both cases, linogram techniques are applied. For 3D-reconstruction the inversion formula contains the second derivative filter instead of the well-known ramp-filter employed in the 2D-case. The derivative filter is more well-behaved than the 2D ramp-filter. This implies that less zeropadding is necessary which brings about a further reduction of the computational efforts. The method has been verified by experiments on simulated data. The image quality is satisfactory and independent of cone-beam angles. For a 5123 volume we estimate that our method is ten times faster than Grangeats method

  20. 3D Image Modelling and Specific Treatments in Orthodontics Domain

    Dionysis Goularas

    2007-01-01

    Full Text Available In this article, we present a 3D specific dental plaster treatment system for orthodontics. From computer tomography scanner images, we propose first a 3D image modelling and reconstruction method of the Mandible and Maxillary based on an adaptive triangulation allowing management of contours meant for the complex topologies. Secondly, we present two specific treatment methods directly achieved on obtained 3D model allowing the automatic correction for the setting in occlusion of the Mandible and the Maxillary, and the teeth segmentation allowing more specific dental examinations. Finally, these specific treatments are presented via a client/server application with the aim of allowing a telediagnosis and treatment.

  1. A NONOVERLAPPING DOMAIN DECOMPOSITION METHOD FOR EXTERIOR 3-D PROBLEM

    De-hao Yu; Ji-ming Wu; Ji-ming Wu

    2001-01-01

    In this paper, a nonoverlapping domain decomposition method, which is based on the natural boundary reduction(cf. [4, 13, 15]), is developed to solve the boundary value problem in exterior three-dimensional domain of general shape. Convergence analyses both for the exterior spherical domain and the general exterior domain are made. Some numerical examples are also provided to illustrate the method.

  2. Time domain topology optimization of 3D nanophotonic devices

    Elesin, Yuriy; Lazarov, Boyan Stefanov; Jensen, Jakob Søndergaard; Sigmund, Ole

    2014-01-01

    We present an efficient parallel topology optimization framework for design of large scale 3D nanophotonic devices. The code shows excellent scalability and is demonstrated for optimization of broadband frequency splitter, waveguide intersection, photonic crystal-based waveguide and nanowire-base......-based waveguide. The obtained results are compared to simplified 2D studies and we demonstrate that 3D topology optimization may lead to significant performance improvements. © 2013 Elsevier B.V. All rights reserved....

  3. Investigation of murine vasodynamics by Fourier domain optical coherence tomography

    Meißner, Sven; Müller, Gregor; Walther, Julia; Krüger, Alexander; Cuevas, Maximiliano; Eichhorn, Birgit; Ravens, Ursula; Morawietz, Henning; Koch, Edmund

    2007-07-01

    In vivo imaging of blood vessels obtain useful insights in characterizing the dynamics of vasoconstriction and vasodilation. Fourier domain optical Coherence Tomography (FD-OCT) imaging technique permits in vivo investigation of blood vessels in their anatomical context without preparation traumata by temporal resolved image stacks. OCT is an optical, contact less imaging technique based on Michelson interferometry of short coherent near infrared light. Particularly by the possibility of a contact-less measurement and the high axial resolution up to 10 microns OCT is superior to an investigation by ultra sound measurement. Furthermore we obtain a high time resolution of vessel dynamic measurements with the used Fourier domain OCT-system by a high A-scan rate [1,22kHz]. In this study the model of saphenous artery was chosen for analyzing function and dynamics. The arteria saphena in the mouse is a suitable blood vessel due to the small inner diameter, a sensitive response to vasoactive stimuli and an advantageous anatomically position. Male wild type mice (C57BL/6) at the age of 8 weeks were fed control or high-fat diet for 10 weeks before analyzing the vasodynamics. The blood vessel was stimulated by dermal application of potassium to induce vasoconstriction or Sodium-Nitroprusside (SNP) to induce vasodilation. The morphology of the a. saphena and vein was determined by 3D image stacks. Time series (72 seconds, 300x512 pixel per frame) of cross-sectional images were analysed using semi automatic image processing software. Time course of dynamic parameters of the vessel was measured.

  4. Time-Domain Analysis for 3-D Moored Systems

    肖越; 王言英

    2004-01-01

    In the paper, a comprehensive numerical study on the moored system is performed in time domain. The moored system, which is composed of the floating body sub-system and the mooring line sub-system, is calculated as a whole system by coupling. A time-domain method is applied to the analysis of the mooring line sub-system, and at the same time, an indirect time-domain method translated from frequency-domain to time-domain is developed to calculate the floating body sub-system. In the end, an FPSO vessel is calculated as a numerical example by the present method. A comparison of the result of the model test and that of the numerical method indicates that the present method is exact and effective.

  5. Digital Backpropagation in the Nonlinear Fourier Domain

    Wahls, Sander; Prilepsky, Jaroslaw E; Poor, H Vincent; Turitsyn, Sergei K

    2015-01-01

    Nonlinear and dispersive transmission impairments in coherent fiber-optic communication systems are often compensated by reverting the nonlinear Schr\\"odinger equation, which describes the evolution of the signal in the link, numerically. This technique is known as digital backpropagation. Typical digital backpropagation algorithms are based on split-step Fourier methods in which the signal has to be discretized in time and space. The need to discretize in both time and space however makes the real-time implementation of digital backpropagation a challenging problem. In this paper, a new fast algorithm for digital backpropagation based on nonlinear Fourier transforms is presented. Aiming at a proof of concept, the main emphasis will be put on fibers with normal dispersion in order to avoid the issue of solitonic components in the signal. However, it is demonstrated that the algorithm also works for anomalous dispersion if the signal power is low enough. Since the spatial evolution of a signal governed by the ...

  6. Exact and approximate Fourier rebinning algorithms for the solution of the data truncation problem in 3-D PET.

    Bouallègue, Fayçal Ben; Crouzet, Jean-François; Comtat, Claude; Fourcade, Marjolaine; Mohammadi, Bijan; Mariano-Goulart, Denis

    2007-07-01

    This paper presents an extended 3-D exact rebinning formula in the Fourier space that leads to an iterative reprojection algorithm (iterative FOREPROJ), which enables the estimation of unmeasured oblique projection data on the basis of the whole set of measured data. In first approximation, this analytical formula also leads to an extended Fourier rebinning equation that is the basis for an approximate reprojection algorithm (extended FORE). These algorithms were evaluated on numerically simulated 3-D positron emission tomography (PET) data for the solution of the truncation problem, i.e., the estimation of the missing portions in the oblique projection data, before the application of algorithms that require complete projection data such as some rebinning methods (FOREX) or 3-D reconstruction algorithms (3DRP or direct Fourier methods). By taking advantage of all the 3-D data statistics, the iterative FOREPROJ reprojection provides a reliable alternative to the classical FOREPROJ method, which only exploits the low-statistics nonoblique data. It significantly improves the quality of the external reconstructed slices without loss of spatial resolution. As for the approximate extended FORE algorithm, it clearly exhibits limitations due to axial interpolations, but will require clinical studies with more realistic measured data in order to decide on its pertinence. PMID:17649913

  7. Quantitative evaluation of temporal partial coherence using 3D Fourier transforms of through-focus TEM images

    We evaluate the temporal partial coherence of transmission electron microscopy (TEM) using the three-dimensional (3D) Fourier transform (FT) of through-focus images. Young's fringe method often indicates the unexpected high-frequency information due to non-linear imaging terms. We have already used the 3D FT of axial (non-tilted) through-focus images to reduce the effect of non-linear terms on the linear imaging term, and demonstrated the improvement of monochromated lower-voltage TEM performance [Kimoto et al., Ultramicroscopy 121 (2012) 31–39]. Here we apply the 3D FT method with intentionally tilted incidence to normalize various factors associated with a TEM specimen and an imaging device. The temporal partial coherence of two microscopes operated at 30, 60 and 80 kV is evaluated. Our method is applicable to such cases where the non-linear terms become more significant in lower acceleration voltage or aberration-corrected high spatial resolution TEM. - Highlights: • We assess the temporal partial coherence of TEM using a 3-dimensional (3D) Fourier transform (FT) of through-focus images. • We apply the 3D FT method with intentionally tilted incidence to normalize various factors associated with a TEM specimen and an imaging device. • The spatial frequency at which information transfer decreases to 1/e2 (13.5%) is determined for two lower-voltage TEM systems

  8. 3D seismic modeling and reverse‐time migration with the parallel Fourier method using non‐blocking collective communications

    Chu, Chunlei

    2009-01-01

    The major performance bottleneck of the parallel Fourier method on distributed memory systems is the network communication cost. In this study, we investigate the potential of using non‐blocking all‐to‐all communications to solve this problem by overlapping computation and communication. We present the runtime comparison of a 3D seismic modeling problem with the Fourier method using non‐blocking and blocking calls, respectively, on a Linux cluster. The data demonstrate that a performance improvement of up to 40% can be achieved by simply changing blocking all‐to‐all communication calls to non‐blocking ones to introduce the overlapping capability. A 3D reverse‐time migration result is also presented as an extension to the modeling work based on non‐blocking collective communications.

  9. Analysis of hybrid dielectric-plasmonic slot waveguide structures with 3D Fourier modal methods

    Čtyroký, Jiří; Kwiecien, P.; Richter, I.

    2013-01-01

    Roč. 8, 23 March (2013), s. 130241-130246. ISSN 1990-2573 R&D Projects: GA ČR(CZ) GAP205/10/0046; GA MŠk OC09061 Institutional support: RVO:67985882 Keywords : Fourier modal method * Hybrid dielectric-plasmonic waveguide * Plasmonic waveguides Subject RIV: JA - Electronics ; Optoelectronics, Electrical Engineering Impact factor: 1.152, year: 2013

  10. Discrete Fourier analysis with lattices on planar domains

    Li, Huiyuan; Xu, Yuan

    2009-01-01

    A discrete Fourier analysis associated with translation lattices is developed recently by the authors. It permits two lattices, one determining the integral domain and the other determining the family of exponential functions. Possible choices of lattices are discussed in the case of lattices that tile $\\RR^2$ and several new results on cubature and interpolation by trigonometric, as well as algebraic, polynomials are obtained.

  11. Dynamics of Fourier domain mode-locked lasers.

    Slepneva, S; Kelleher, B; O'Shaughnessy, B; Hegarty, S P; Vladimirov, A G; Huyet, G

    2013-08-12

    An analysis of the dynamical features in the output of a Fourier Domain Mode Locked laser is presented. An experimental study of the wavelength sweep-direction asymmetry in the output of such devices is undertaken. A mathematical model based on a set of delay differential equations is developed and shown to agree well with experiment. PMID:23938841

  12. Power filtering of nth order in the fractional Fourier domain

    Alieva, Tatiana; Calvo, Maria Luisa [Departamento de Optica, Facultad de Fisicas, Universidad Complutense de Madrid, Madrid (Spain); Bastiaans, Martin J. [Faculteit Elektrotechniek, Technische Universiteit Eindhoven, Eindhoven (Netherlands)

    2002-09-13

    The main properties of the power filtering operation in the fractional Fourier domain and its relationship to the differentiation operation are considered. The application of linear power filtering for solving the phase retrieval problem from intensity distributions only is proposed. The optical configuration for the experimental realization of the method is discussed. (author)

  13. Power filtering of nth order in the fractional Fourier domain

    The main properties of the power filtering operation in the fractional Fourier domain and its relationship to the differentiation operation are considered. The application of linear power filtering for solving the phase retrieval problem from intensity distributions only is proposed. The optical configuration for the experimental realization of the method is discussed. (author)

  14. Suppression law of quantum states in a 3D photonic fast Fourier transform chip.

    Crespi, Andrea; Osellame, Roberto; Ramponi, Roberta; Bentivegna, Marco; Flamini, Fulvio; Spagnolo, Nicolò; Viggianiello, Niko; Innocenti, Luca; Mataloni, Paolo; Sciarrino, Fabio

    2016-01-01

    The identification of phenomena able to pinpoint quantum interference is attracting large interest. Indeed, a generalization of the Hong-Ou-Mandel effect valid for any number of photons and optical modes would represent an important leap ahead both from a fundamental perspective and for practical applications, such as certification of photonic quantum devices, whose computational speedup is expected to depend critically on multi-particle interference. Quantum distinctive features have been predicted for many particles injected into multimode interferometers implementing the Fourier transform over the optical modes. Here we develop a scalable approach for the implementation of the fast Fourier transform algorithm using three-dimensional photonic integrated interferometers, fabricated via femtosecond laser writing technique. We observe the suppression law for a large number of output states with four- and eight-mode optical circuits: the experimental results demonstrate genuine quantum interference between the injected photons, thus offering a powerful tool for diagnostic of photonic platforms. PMID:26843135

  15. Adaptive optics assisted Fourier domain OCT with balanced detection

    Meadway, A.; Bradu, A.; Hathaway, M.; Van der Jeught, S.; Rosen, R. B.; Podoleanu, A. Gh.

    2011-03-01

    Two factors are of importance to optical coherence tomography (OCT), resolution and sensitivity. Adaptive optics improves the resolution of a system by correcting for aberrations causing distortions in the wave-front. Balanced detection has been used in time domain OCT systems by removing excess photon noise, however it has not been used in Fourier domain systems, as the cameras used in the spectrometers saturated before excess photon noise becomes a problem. Advances in camera technology mean that this is no longer the case and balanced detection can now be used to improve the signal to noise ratio in a Fourier domain (FD) OCT system. An FD-OCT system, enhanced with adaptive optics, is presented and is used to show the improvement that balanced detection can provide. The signal to noise ratios of single camera detection and balanced detection are assessed and in-vivo retinal images are acquired to demonstrate better image quality when using balance detection.

  16. Mapping of the C3d receptor (CR2)-binding site and a neoantigenic site in the C3d domain of the third component of complement.

    LAMBRIS, J. D.; Ganu, V S; Hirani, S.; Müller-Eberhard, H. J.

    1985-01-01

    The C3d domain of C3 contains the site that binds to the C3d receptor (CR2) which is expressed on B lymphocytes. It also contains a neoantigenic determinant that is recognized by monoclonal antibody (mAb) 130 and is expressed when C3b is cleaved to iC3b and subsequently to C3dg or C3d. mAb 130 inhibits the binding of C3d to CR2. In this study, the locations of the CR2-binding site and of the neoantigen recognized by mAb 130 within the C3d domain were investigated. Treatment of human C3d with ...

  17. Fourier information optics for the ultrafast time domain.

    Weiner, Andrew M

    2008-02-01

    Ultrafast photonic signal processing based on Fourier optics principles offers exciting possibilities to go beyond the processing speeds of electronics technologies for applications in high-speed fiber communications and ultrawideband wireless. I review our recent work on processing of ultrafast optical signals via conversion between time, space, and optical frequency (Fourier) domains. Specific topics include optical arbitrary waveform generation, application of optical pulse shaping technologies for wavelength-parallel compensation of fiber transmission impairments and for experimental studies of optical code-division multiple-access communications, and application of photonic methods for precompensation of dispersion effects in wireless transmission of radio-frequency signals over ultrawideband antenna links. PMID:18239704

  18. Fourier domain asymmetric cryptosystem for privacy protected multimodal biometric security

    Choudhury, Debesh

    2016-04-01

    We propose a Fourier domain asymmetric cryptosystem for multimodal biometric security. One modality of biometrics (such as face) is used as the plaintext, which is encrypted by another modality of biometrics (such as fingerprint). A private key is synthesized from the encrypted biometric signature by complex spatial Fourier processing. The encrypted biometric signature is further encrypted by other biometric modalities, and the corresponding private keys are synthesized. The resulting biometric signature is privacy protected since the encryption keys are provided by the human, and hence those are private keys. Moreover, the decryption keys are synthesized using those private encryption keys. The encrypted signatures are decrypted using the synthesized private keys and inverse complex spatial Fourier processing. Computer simulations demonstrate the feasibility of the technique proposed.

  19. 3DSwap: Curated knowledgebase of proteins involved in 3D domain swapping

    Shameer, Khader

    2011-09-29

    Three-dimensional domain swapping is a unique protein structural phenomenon where two or more protein chains in a protein oligomer share a common structural segment between individual chains. This phenomenon is observed in an array of protein structures in oligomeric conformation. Protein structures in swapped conformations perform diverse functional roles and are also associated with deposition diseases in humans. We have performed in-depth literature curation and structural bioinformatics analyses to develop an integrated knowledgebase of proteins involved in 3D domain swapping. The hallmark of 3D domain swapping is the presence of distinct structural segments such as the hinge and swapped regions. We have curated the literature to delineate the boundaries of these regions. In addition, we have defined several new concepts like \\'secondary major interface\\' to represent the interface properties arising as a result of 3D domain swapping, and a new quantitative measure for the \\'extent of swapping\\' in structures. The catalog of proteins reported in 3DSwap knowledgebase has been generated using an integrated structural bioinformatics workflow of database searches, literature curation, by structure visualization and sequence-structure-function analyses. The current version of the 3DSwap knowledgebase reports 293 protein structures, the analysis of such a compendium of protein structures will further the understanding molecular factors driving 3D domain swapping. The Author(s) 2011.

  20. A 3D domain decomposition approach for the identification of spatially varying elastic material parameters

    Moussawi, Ali

    2015-02-24

    Summary: The post-treatment of (3D) displacement fields for the identification of spatially varying elastic material parameters is a large inverse problem that remains out of reach for massive 3D structures. We explore here the potential of the constitutive compatibility method for tackling such an inverse problem, provided an appropriate domain decomposition technique is introduced. In the method described here, the statically admissible stress field that can be related through the known constitutive symmetry to the kinematic observations is sought through minimization of an objective function, which measures the violation of constitutive compatibility. After this stress reconstruction, the local material parameters are identified with the given kinematic observations using the constitutive equation. Here, we first adapt this method to solve 3D identification problems and then implement it within a domain decomposition framework which allows for reduced computational load when handling larger problems.

  1. The DynDom3D Webserver for the Analysis of Domain Movements in Multimeric Proteins.

    Girdlestone, Christopher; Hayward, Steven

    2016-01-01

    DynDom3D is a program for the analysis of domain movements in multimeric proteins. Its inputs are two structure files that indicate a possible domain movement, but the onus has been on the user to process the files so that there is the necessary one-to-one equivalence between atoms in the two atom lists. This is often a prohibitive task to carry out manually, which has limited the application of DynDom3D. Here we report on a webserver with a preprocessor that automatically creates an equivalence between atoms using sequence alignment methods. The processed structure files are passed to DynDom3D and the results are presented on a webpage that includes molecular graphics for easy visualization. PMID:26540459

  2. Gravity data inversion to determine 3D topographycal density contrast of Banten area, Indonesia based on fast Fourier transform

    Windhari, Ayuty; Handayani, Gunawan

    2015-04-01

    The 3D inversion gravity anomaly to estimate topographical density using a matlab source code from gridded data provided by Parker Oldenburg algorithm based on fast Fourier transform was computed. We extend and improved the source code of 3DINVERT.M invented by Gomez Ortiz and Agarwal (2005) using the relationship between Fourier transform of the gravity anomaly and the sum of the Fourier transform from the topography density. We gave density contrast between the two media to apply the inversion. FFT routine was implemented to construct amplitude spectrum to the given mean depth. The results were presented as new graphics of inverted topography density, the gravity anomaly due to the inverted topography and the difference between the input gravity data and the computed ones. It terminates when the RMS error is lower than pre-assigned value used as convergence criterion or until maximum of iterations is reached. As an example, we used the matlab program on gravity data of Banten region, Indonesia.

  3. Global regular solutions for the 3D Zakharov-Kuznetsov equation posed on unbounded domains

    Larkin, N. A.

    2015-09-01

    An initial-boundary value problem for the 3D Zakharov-Kuznetsov equation posed on unbounded domains is considered. Existence and uniqueness of a global regular solution as well as exponential decay of the H2-norm for small initial data are proven.

  4. Laplace-domain waveform modeling and inversion for the 3D acoustic-elastic coupled media

    Shin, Jungkyun; Shin, Changsoo; Calandra, Henri

    2016-06-01

    Laplace-domain waveform inversion reconstructs long-wavelength subsurface models by using the zero-frequency component of damped seismic signals. Despite the computational advantages of Laplace-domain waveform inversion over conventional frequency-domain waveform inversion, an acoustic assumption and an iterative matrix solver have been used to invert 3D marine datasets to mitigate the intensive computing cost. In this study, we develop a Laplace-domain waveform modeling and inversion algorithm for 3D acoustic-elastic coupled media by using a parallel sparse direct solver library (MUltifrontal Massively Parallel Solver, MUMPS). We precisely simulate a real marine environment by coupling the 3D acoustic and elastic wave equations with the proper boundary condition at the fluid-solid interface. In addition, we can extract the elastic properties of the Earth below the sea bottom from the recorded acoustic pressure datasets. As a matrix solver, the parallel sparse direct solver is used to factorize the non-symmetric impedance matrix in a distributed memory architecture and rapidly solve the wave field for a number of shots by using the lower and upper matrix factors. Using both synthetic datasets and real datasets obtained by a 3D wide azimuth survey, the long-wavelength component of the P-wave and S-wave velocity models is reconstructed and the proposed modeling and inversion algorithm are verified. A cluster of 80 CPU cores is used for this study.

  5. Predicting detection performance with model observers: Fourier domain or spatial domain?

    Chen, Baiyu; Yu, Lifeng; Leng, Shuai; Kofler, James; Favazza, Christopher; Vrieze, Thomas; McCollough, Cynthia

    2016-03-01

    The use of Fourier domain model observer is challenged by iterative reconstruction (IR), because IR algorithms are nonlinear and IR images have noise texture different from that of FBP. A modified Fourier domain model observer, which incorporates nonlinear noise and resolution properties, has been proposed for IR and needs to be validated with human detection performance. On the other hand, the spatial domain model observer is theoretically applicable to IR, but more computationally intensive than the Fourier domain method. The purpose of this study is to compare the modified Fourier domain model observer to the spatial domain model observer with both FBP and IR images, using human detection performance as the gold standard. A phantom with inserts of various low contrast levels and sizes was repeatedly scanned 100 times on a third-generation, dual-source CT scanner at 5 dose levels and reconstructed using FBP and IR algorithms. The human detection performance of the inserts was measured via a 2-alternative-forced-choice (2AFC) test. In addition, two model observer performances were calculated, including a Fourier domain non-prewhitening model observer and a spatial domain channelized Hotelling observer. The performance of these two mode observers was compared in terms of how well they correlated with human observer performance. Our results demonstrated that the spatial domain model observer correlated well with human observers across various dose levels, object contrast levels, and object sizes. The Fourier domain observer correlated well with human observers using FBP images, but overestimated the detection performance using IR images.

  6. A Generalized Spatial Correlation Model for 3D MIMO Channels based on the Fourier Coefficients of Power Spectrums

    Nadeem, Qurrat-Ul-Ain

    2015-05-07

    Previous studies have confirmed the adverse impact of fading correlation on the mutual information (MI) of two-dimensional (2D) multiple-input multiple-output (MIMO) systems. More recently, the trend is to enhance the system performance by exploiting the channel’s degrees of freedom in the elevation, which necessitates the derivation and characterization of three-dimensional (3D) channels in the presence of spatial correlation. In this paper, an exact closed-form expression for the Spatial Correlation Function (SCF) is derived for 3D MIMO channels. This novel SCF is developed for a uniform linear array of antennas with nonisotropic antenna patterns. The proposed method resorts to the spherical harmonic expansion (SHE) of plane waves and the trigonometric expansion of Legendre and associated Legendre polynomials. The resulting expression depends on the underlying arbitrary angular distributions and antenna patterns through the Fourier Series (FS) coefficients of power azimuth and elevation spectrums. The novelty of the proposed method lies in the SCF being valid for any 3D propagation environment. The developed SCF determines the covariance matrices at the transmitter and the receiver that form the Kronecker channel model. In order to quantify the effects of correlation on the system performance, the information-theoretic deterministic equivalents of the MI for the Kronecker model are utilized in both mono-user and multi-user cases. Numerical results validate the proposed analytical expressions and elucidate the dependence of the system performance on azimuth and elevation angular spreads and antenna patterns. Some useful insights into the behaviour of MI as a function of downtilt angles are provided. The derived model will help evaluate the performance of correlated 3D MIMO channels in the future.

  7. Azimuth–opening angle domain imaging in 3D Gaussian beam depth migration

    Common-image gathers indexed by opening angle and azimuth at imaging points in 3D situations are the key inputs for amplitude-variation-with-angle and velocity analysis by tomography. The Gaussian beam depth migration, propagating each ray by a Gaussian beam form and summing the contributions from all the individual beams to produce the wavefield, can overcome the multipath problem, image steep reflectors and, even more important, provide a convenient and efficient strategy to extract azimuth–opening angle domain common-image gathers (ADCIGs) in 3D seismic imaging. We present a method for computing azimuth and opening angle at imaging points to output 3D ADCIGs by computing the source and receiver wavefield direction vectors which are restricted in the effective region of the corresponding Gaussian beams. In this paper, the basic principle of Gaussian beam migration (GBM) is briefly introduced; the technology and strategy to yield ADCIGs by GBM are analyzed. Numerical tests and field data application demonstrate that the azimuth–opening angle domain imaging method in 3D Gaussian beam depth migration is effective. (paper)

  8. 3D time-domain airborne EM modeling for an arbitrarily anisotropic earth

    Yin, Changchun; Qi, Yanfu; Liu, Yunhe

    2016-08-01

    Time-domain airborne EM data is currently interpreted based on an isotropic model. Sometimes, it can be problematic when working in the region with distinct dipping stratifications. In this paper, we simulate the 3D time-domain airborne EM responses over an arbitrarily anisotropic earth with topography by edge-based finite-element method. Tetrahedral meshes are used to describe the abnormal bodies with complicated shapes. We further adopt the Backward Euler scheme to discretize the time-domain diffusion equation for electric field, obtaining an unconditionally stable linear equations system. We verify the accuracy of our 3D algorithm by comparing with 1D solutions for an anisotropic half-space. Then, we switch attentions to effects of anisotropic media on the strengths and the diffusion patterns of time-domain airborne EM responses. For numerical experiments, we adopt three typical anisotropic models: 1) an anisotropic anomalous body embedded in an isotropic half-space; 2) an isotropic anomalous body embedded in an anisotropic half-space; 3) an anisotropic half-space with topography. The modeling results show that the electric anisotropy of the subsurface media has big effects on both the strengths and the distribution patterns of time-domain airborne EM responses; this effect needs to be taken into account when interpreting ATEM data in areas with distinct anisotropy.

  9. Fourier Phase Domain Steganography: Phase Bin Encoding Via Interpolation

    Rivas, Edward

    2007-04-01

    In recent years there has been an increased interest in audio steganography and watermarking. This is due primarily to two reasons. First, an acute need to improve our national security capabilities in light of terrorist and criminal activity has driven new ideas and experimentation. Secondly, the explosive proliferation of digital media has forced the music industry to rethink how they will protect their intellectual property. Various techniques have been implemented but the phase domain remains a fertile ground for improvement due to the relative robustness to many types of distortion and immunity to the Human Auditory System. A new method for embedding data in the phase domain of the Discrete Fourier Transform of an audio signal is proposed. Focus is given to robustness and low perceptibility, while maintaining a relatively high capacity rate of up to 172 bits/s.

  10. One-dimensional rainbow technique using Fourier domain filtering.

    Wu, Yingchun; Promvongsa, Jantarat; Wu, Xuecheng; Cen, Kefa; Grehan, Gerard; Saengkaew, Sawitree

    2015-11-16

    Rainbow refractometry can measure the refractive index and the size of a droplet simultaneously. The refractive index measurement is extracted from the absolute rainbow scattering angle. Accordingly, the angular calibration is vital for accurate measurements. A new optical design of the one-dimensional rainbow technique is proposed by using a one-dimensional spatial filter in the Fourier domain. The relationship between the scattering angle and the CCD pixel of a recorded rainbow image can be accurately determined by a simple calibration. Moreover, only the light perpendicularly incident on the lens in the angle (φ) direction is selected, which exactly matches the classical inversion algorithm used in rainbow refractometry. Both standard and global one-dimensional rainbow techniques are implemented with the proposed optical design, and are successfully applied to measure the refractive index and the size of a line of n-heptane droplets. PMID:26698532

  11. 3D Laplace-domain full waveform inversion using a single GPU card

    Shin, Jungkyun; Ha, Wansoo; Jun, Hyunggu; Min, Dong-Joo; Shin, Changsoo

    2014-06-01

    The Laplace-domain full waveform inversion is an efficient long-wavelength velocity estimation method for seismic datasets lacking low-frequency components. However, to invert a 3D velocity model, a large cluster of CPU cores have commonly been required to overcome the extremely long computing time caused by a large impedance matrix and a number of source positions. In this study, a workstation with a single GPU card (NVIDIA GTX 580) is successfully used for the 3D Laplace-domain full waveform inversion rather than a large cluster of CPU cores. To exploit a GPU for our inversion algorithm, the routine for the iterative matrix solver is ported to the CUDA programming language for forward and backward modeling parts with minimized modification of the remaining parts, which were originally written in Fortran 90. Using a uniformly structured grid set, nonzero values in the sparse impedance matrix can be arranged according to certain rules, which efficiently parallelize the preconditioned conjugate gradient method for a number of threads contained in the GPU card. We perform a numerical experiment to verify the accuracy of a floating point operation performed by a GPU to calculate the Laplace-domain wavefield. We also measure the efficiencies of the original CPU and modified GPU programs using a cluster of CPU cores and a workstation with a GPU card, respectively. Through the analysis, the parallelized inversion code for a GPU achieves the speedup of 14.7-24.6x compared to a CPU-based serial code depending on the degrees of freedom of the impedance matrix. Finally, the practicality of the proposed algorithm is examined by inverting a 3D long-wavelength velocity model using wide azimuth real datasets in 3.7 days.

  12. Second-Order Wave Diffraction Around 3-D Bodies by A Time-Domain Method

    柏威; 滕斌

    2001-01-01

    A time-domain method is applied to simulate nonlinear wave diffraction around a surface piercing 3-D arbitrary body. The method involves the application of Taylor series expansions and the use of perturbation procedure to establish the corresponding boundary value problems with respect to a time-independent fluid domain. A boundary element method based on B-spline expansion is used to calculate the wave field at each time step, and the free surface boundary condition is satisfied to the second order of wave steepness by a numerical integration in time. An artificial damping layer is adopted on the free surface for the removal of wave reflection from the outer boundary. As an illustration, the method is used to compute the second-order wave forces and run-up on a surface-piercing circular cylinder. The present method is found to be accurate, computationally efficient, and numerically stable.

  13. Numerical modeling of time domain 3-D problems in accelerator physics

    Time domain analysis is relevant in particle accelerators to study the electromagnetic field interaction of a moving source particle on a lagging test particle as the particles pass an accelerating cavity or some other structure. These fields are called wake fields. The travelling beam inside a beam pipe may undergo more complicated interactions with its environment due to the presence of other irregularities like wires, thin slots, joints and other types of obstacles. Analytical solutions of such problems is impossible and one has to resort to a numerical method. In this paper we present results of our first attempt to model these problems in 3-D using our finite difference time domain (FDTD) code. 10 refs., 9 figs

  14. Using 3D Simulation of Elastic Wave Propagation in Laplace Domain for Electromagnetic-Seismic Inverse Modeling

    Petrov, P.; Newman, G. A.

    2010-12-01

    domain we had developed 3D code for full-wave field simulation in the elastic media which take into account nonlinearity introduced by free-surface effects. Our approach is based on the velocity-stress formulation. In the contrast to conventional formulation we defined the material properties such as density and Lame constants not at nodal points but within cells. This second order finite differences method formulated in the cell-based grid, generate numerical solutions compatible with analytical ones within the range errors determinate by dispersion analysis. Our simulator will be embedded in an inversion scheme for joint seismic- electromagnetic imaging. It also offers possibilities for preconditioning the seismic wave propagation problems in the frequency domain. References. Shin, C. & Cha, Y. (2009), Waveform inversion in the Laplace-Fourier domain, Geophys. J. Int. 177(3), 1067- 1079. Shin, C. & Cha, Y. H. (2008), Waveform inversion in the Laplace domain, Geophys. J. Int. 173(3), 922-931. Commer, M. & Newman, G. (2008), New advances in three-dimensional controlled-source electromagnetic inversion, Geophys. J. Int. 172(2), 513-535. Newman, G. A., Commer, M. & Carazzone, J. J. (2010), Imaging CSEM data in the presence of electrical anisotropy, Geophysics, in press.

  15. Determination of glucose concentration using Fourier domain optical coherence tomogram

    El-Sharkawy, Yasser H.

    2009-02-01

    In order to enhance cell culture growth in biosensors such as those for glucose detection must be developed that are capable of monitoring cell culture processes continuously and accurate. Fourier domain optical coherence tomography (FD-OCT) is used to obtain cell images with nanometer level resolution by analyzing the interference pattern by the mixing of reference and objective light to determine glucose concentration in doped double distilled water and create a glucose signature spectrum in salt-sugar solution. We demonstrate ultrahigh-resolution optical coherence tomography (OCT) imaging of in vitro biological cells and an improved deflection angle measurements formal and back projection method is used to reconstruct the two-dimensional glucose concentration performs refractive index distribution. Slopes of OCT signals decreased substantially and almost linearly with the increase of glucose concentration from 2.5 to 15 mg/dl. Phantom studies demonstrated 1% accuracy of scattering- coefficient measurement. Our theoretical and experimental studies suggest that glucose concentration can potentially be measured non-invasively with high sensitivity and accuracy with OCT systems.

  16. Robust and Blind 3D Mesh Watermarking in Spatial Domain Based on Faces Categorization and Sorting

    Molaei, Amir Masoud; Ebrahimnezhad, Hossein; Sedaaghi, Mohammad Hossein

    2016-06-01

    In this paper, a 3D watermarking algorithm in spatial domain is presented with blind detection. In the proposed method, a negligible visual distortion is observed in host model. Initially, a preprocessing is applied on the 3D model to make it robust against geometric transformation attacks. Then, a number of triangle faces are determined as mark triangles using a novel systematic approach in which faces are categorized and sorted robustly. In order to enhance the capability of information retrieval by attacks, block watermarks are encoded using Reed-Solomon block error-correcting code before embedding into the mark triangles. Next, the encoded watermarks are embedded in spherical coordinates. The proposed method is robust against additive noise, mesh smoothing and quantization attacks. Also, it is stout next to geometric transformation, vertices and faces reordering attacks. Moreover, the proposed algorithm is designed so that it is robust against the cropping attack. Simulation results confirm that the watermarked models confront very low distortion if the control parameters are selected properly. Comparison with other methods demonstrates that the proposed method has good performance against the mesh smoothing attacks.

  17. 3D whole core fine mesh multigroup diffusion calculations by domain decomposition through alternate dissections

    The fine mesh diffusion formulation is extended to deal with multigroup 3-D problems in rectangular geometries. The formulation includes interface discontinuity factors per cell type, pre-calculated from transport solutions. The iterative scheme, aiming to an efficient parallel implementation in memory distributed multi-processors, is based on domain decomposition in the 4 possible sets of 4 neighbor quarters of assemblies. The alternate dissections achieve convergence to the exact boundary conditions, while attenuating high frequency noise. Whole core convergence is accelerated in the long wavelength effects by a consistent high-order analytical nodal solution performed by the ANDES solver. A neutronics - thermal-hydraulics iterative scheme is also developed to compute best estimate results, by coupling at the detailed cell-subchannel scale the COBAYA3 code with several TH subchannel codes. The numerical performance and convergence rates are verified by computing pin-cell scale solutions for the OECD/NEA/USNRC PWR MOX/UO2 Core Transient Benchmark in 8 energy groups and heterogeneous assemblies. The cell-subchannel scale neutronics and thermal-hydraulics coupling, allows the verification of the effects of the detailed TH feedbacks on cross-sections and, thus, on fuel pin powers, calculated here for a 3D color-set of two different fuel types of the previous benchmark, using COBAYA3 and COBRA-3C. (authors)

  18. Radiative transfer with scattering for domain-decomposed 3D MHD simulations of cool stellar atmospheres

    Hayek, W; Carlsson, M; Trampedach, R; Collet, R; Gudiksen, B V; Hansteen, V H; Leenaarts, J

    2010-01-01

    We present the implementation of a radiative transfer solver with coherent scattering in the new BIFROST code for radiative magneto-hydrodynamical (MHD) simulations of stellar surface convection. The code is fully parallelized using MPI domain decomposition, which allows for large grid sizes and improved resolution of hydrodynamical structures. We apply the code to simulate the surface granulation in a solar-type star, ignoring magnetic fields, and investigate the importance of coherent scattering for the atmospheric structure. A scattering term is added to the radiative transfer equation, requiring an iterative computation of the radiation field. We use a short-characteristics-based Gauss-Seidel acceleration scheme to compute radiative flux divergences for the energy equation. The effects of coherent scattering are tested by comparing the temperature stratification of three 3D time-dependent hydrodynamical atmosphere models of a solar-type star: without scattering, with continuum scattering only, and with bo...

  19. Domain decomposition PN solutions to the 3D transport benchmark over a range in parameter space

    The objectives of this contribution are twofold. First, the Domain Decomposition (DD) method used in the PARAFISH parallel transport solver is re-interpreted as a Generalized Schwarz Splitting as defined by Tang [SIAM J Sci Stat Comput, vol.13 (2), pp. 573-595, 1992]. Second, PARAFISH provides spherical harmonic (i.e., PN) solutions to the NEA benchmark suite for 3D transport methods and codes over a range in parameter space. To the best of the author's knowledge, these are the first spherical harmonic solutions provided for this demanding benchmark suite. They have been obtained using 512 CPU cores of the JuRoPa machine installed at the Juelich Computing Center (Germany). (author)

  20. Seamless Heterogeneous 3D Tessellation via DWT Domain Smoothing and Mosaicking

    Gilles Gesquière

    2010-01-01

    Full Text Available With todays geobrowsers, the tessellations are far from being smooth due to a variety of reasons: the principal being the light difference and resolution heterogeneity. Whilst the former has been extensively dealt with in the literature through classic mosaicking techniques, the latter has got little attention. We focus on this latter aspect and present two DWT domain methods to seamlessly stitch tiles of heterogeneous resolutions. The first method is local in that each of the tiles that constitute the view, is subjected to one of the three context-based smoothing functions proposed for horizontal, vertical, and radial smoothing, depending on its localization in the tessellation. These functions are applied at the DWT subband level and followed by an inverse DWT to give a smoothened tile. In the second method, though we assume the same tessellation scenario, the view field is thought to be of a sliding window which may contain parts of the tiles from the heterogeneous tessellation. The window is refined in the DWT domain through mosaicking and smoothing followed by a global inverse DWT. Rather than the traditional sense, the mosaicking employed over here targets the heterogeneous resolution. Perceptually, this second method has shown better results than the first one. The methods have been successfully applied to practical examples of both the texture and its corresponding DEM for seamless 3D terrain visualization.

  1. Filterbank implementation for multi-channel sampling in fractional Fourier domain

    2009-01-01

    Reconstruction of a continuous time signal from its periodic nonuniform samples and multi-channel samples is fundamental for multi-channel parallel A/D and MIMO systems. In this paper,with a filterbank interpretation of sampling schemes,the efficient interpolation and reconstruction methods for periodic nonuniform sampling and multi-channel sampling in the fractional Fourier domain are presented. Firstly,the interpolation and sampling identities in the fractional Fourier domain are derived by the properties of the fractional Fourier transform. Then,the particularly efficient filterbank implementations for the periodic nonuniform sampling and the multi-channel sampling in the fractional Fourier domain are introduced. At last,the relationship between the multi-channel sampling and the filterbank in the fractional Fourier domain is investigated,which shows that any perfect reconstruction filterbank can lead to new sampling and reconstruction strategies.

  2. Parametric Spectral Correlations of Disordered Systems in the Fourier Domain

    Guarneri, I.; Zyczkowski, K.; Zakrzewski, J.; Molinari, L.; Casati, G.

    1995-01-01

    A Fourier analysis of parametric level dynamics for random matrices periodically depending on a phase is developed. We demonstrate both theoretically and numerically that under very general conditions the correlation $C(\\varphi )$ of level velocities is singular at $\\varphi =0$ for any symmetry class; the singularity is revealed by algebraic tails in Fourier transforms, and is milder, the stronger the level repulsion in the chosen ensemble. The singularity is strictly connected with the diver...

  3. Keratometric index obtained by Fourier-domain optical coherence tomography.

    Yanjun Hua

    Full Text Available To determine the keratometric indices calculated based on parameters obtained by Fourier-domain optical coherence tomography (FD-OCT.The ratio of anterior corneal curvature to posterior corneal curvature (Ratio and keratometric index (N were calculated within central 3 mm zone with the RTVue FD-OCT (RTVue, Optovue, Inc. in 186 untreated eyes, 60 post-LASIK/PRK eyes, and 39 keratoconus eyes. The total corneal powers were calculated using different keratometric indices: Kcal based on the mean calculated keratometric index, K1.3315 calculated by the keratometric index of 1.3315, and K1.3375 calculated by the keratometric index of 1.3375. In addition, the total corneal powers based on Gaussian optics formula (Kactual were calculated.The means for Ratio in untreated controls, post-LASIK/PRK group and keratoconus group were 1.176 ± 0.022 (95% confidence interval (CI, 1.172-1.179, 1.314 ± 0.042 (95%CI, 1.303-1.325 and 1.229 ± 0.118 (95%CI, 1.191-1.267, respectively. And the mean calculated keratometric index in untreated controls, post-LASIK/PRK group and keratoconus group were 1.3299 ± 0.00085 (95%CI, 1.3272-1.3308, 1.3242 ± 0.00171 (95%CI, 1.3238-1.3246 and 1.3277 ± 0.0046 (95%CI, 1.3263-1.3292, respectively. All the parameters were normally distributed. The differences between Kcal and Kactual, K1.3315 and Kactual, and K1.3375 and Kactual were 0.00 ± 0.11 D, 0.21 ± 0.11 D and 0.99 ± 0.12 D, respectively, in untreated controls; -0.01 ± 0.20 D, 0.85 ± 0.18 D and 1.56 ± 0.16 D, respectively, in post-LASIK/PRK group; and 0.03 ± 0.67 D, 0.56 ± 0.70 D and 1.40 ± 0.76 D, respectively, in keratoconus group.The calculated keratometric index is negatively related to the ratio of anterior corneal curvature to posterior corneal curvature in untreated, post-LASIK/PRK, and keratoconus eyes, respectively. Using the calculated keratometric index may improve the prediction accuracies of total corneal powers in untreated controls, but not in post

  4. Comparison of 2D and 3D Fourier modal methods for modeling subwavelength-structured silicon waveguides

    Kwieciena, P.; Richter, I.; Čtyroký, Jiří

    Bellingham : SPIE, 2011, 83060Y. ISBN 978-0-8194-8953-1. [ Photonics , Devices, and Systems V. Praha (CZ), 24.08.2011-26.08.2011] Institutional research plan: CEZ:AV0Z20670512 Keywords : Fourier modal method * Bi-directional mode expansion propagation method * Bloch mode Subject RIV: JA - Electronics ; Optoelectronics, Electrical Engineering

  5. An iterative KP1 method for solving the transport equation in 3D domains on unstructured grids

    Kokonkov, N. I.; Nikolaeva, O. V.

    2015-10-01

    A two-step iterative KP1 method for solving systems of grid equations that approximate the integro-differential transport equation in 3D domains on unstructured grids using nodal SN methods is described. Results of testing the efficiency of the proposed method in solving benchmark problems of reactor protection on tetrahedral grids are presented.

  6. Accurate characterization of 3D diffraction gratings using time domain discontinuous Galerkin method with exact absorbing boundary conditions

    Sirenko, Kostyantyn

    2013-07-01

    Exact absorbing and periodic boundary conditions allow to truncate grating problems\\' infinite physical domains without introducing any errors. This work presents exact absorbing boundary conditions for 3D diffraction gratings and describes their discretization within a high-order time-domain discontinuous Galerkin finite element method (TD-DG-FEM). The error introduced by the boundary condition discretization matches that of the TD-DG-FEM; this results in an optimal solver in terms of accuracy and computation time. Numerical results demonstrate the superiority of this solver over TD-DG-FEM with perfectly matched layers (PML)-based domain truncation. © 2013 IEEE.

  7. Real-time Graphics Processing Unit Based Fourier Domain Optical Coherence Tomography and Surgical Applications

    Zhang, Kang

    2011-12-01

    In this dissertation, real-time Fourier domain optical coherence tomography (FD-OCT) capable of multi-dimensional micrometer-resolution imaging targeted specifically for microsurgical intervention applications was developed and studied. As a part of this work several ultra-high speed real-time FD-OCT imaging and sensing systems were proposed and developed. A real-time 4D (3D+time) OCT system platform using the graphics processing unit (GPU) to accelerate OCT signal processing, the imaging reconstruction, visualization, and volume rendering was developed. Several GPU based algorithms such as non-uniform fast Fourier transform (NUFFT), numerical dispersion compensation, and multi-GPU implementation were developed to improve the impulse response, SNR roll-off and stability of the system. Full-range complex-conjugate-free FD-OCT was also implemented on the GPU architecture to achieve doubled image range and improved SNR. These technologies overcome the imaging reconstruction and visualization bottlenecks widely exist in current ultra-high speed FD-OCT systems and open the way to interventional OCT imaging for applications in guided microsurgery. A hand-held common-path optical coherence tomography (CP-OCT) distance-sensor based microsurgical tool was developed and validated. Through real-time signal processing, edge detection and feed-back control, the tool was shown to be capable of track target surface and compensate motion. The micro-incision test using a phantom was performed using a CP-OCT-sensor integrated hand-held tool, which showed an incision error less than +/-5 microns, comparing to >100 microns error by free-hand incision. The CP-OCT distance sensor has also been utilized to enhance the accuracy and safety of optical nerve stimulation. Finally, several experiments were conducted to validate the system for surgical applications. One of them involved 4D OCT guided micro-manipulation using a phantom. Multiple volume renderings of one 3D data set were

  8. Reconstruction for time-domain in vivo EPR 3D multigradient oximetric imaging--a parallel processing perspective.

    Dharmaraj, Christopher D; Thadikonda, Kishan; Fletcher, Anthony R; Doan, Phuc N; Devasahayam, Nallathamby; Matsumoto, Shingo; Johnson, Calvin A; Cook, John A; Mitchell, James B; Subramanian, Sankaran; Krishna, Murali C

    2009-01-01

    Three-dimensional Oximetric Electron Paramagnetic Resonance Imaging using the Single Point Imaging modality generates unpaired spin density and oxygen images that can readily distinguish between normal and tumor tissues in small animals. It is also possible with fast imaging to track the changes in tissue oxygenation in response to the oxygen content in the breathing air. However, this involves dealing with gigabytes of data for each 3D oximetric imaging experiment involving digital band pass filtering and background noise subtraction, followed by 3D Fourier reconstruction. This process is rather slow in a conventional uniprocessor system. This paper presents a parallelization framework using OpenMP runtime support and parallel MATLAB to execute such computationally intensive programs. The Intel compiler is used to develop a parallel C++ code based on OpenMP. The code is executed on four Dual-Core AMD Opteron shared memory processors, to reduce the computational burden of the filtration task significantly. The results show that the parallel code for filtration has achieved a speed up factor of 46.66 as against the equivalent serial MATLAB code. In addition, a parallel MATLAB code has been developed to perform 3D Fourier reconstruction. Speedup factors of 4.57 and 4.25 have been achieved during the reconstruction process and oximetry computation, for a data set with 23 x 23 x 23 gradient steps. The execution time has been computed for both the serial and parallel implementations using different dimensions of the data and presented for comparison. The reported system has been designed to be easily accessible even from low-cost personal computers through local internet (NIHnet). The experimental results demonstrate that the parallel computing provides a source of high computational power to obtain biophysical parameters from 3D EPR oximetric imaging, almost in real-time. PMID:19672315

  9. Reconstruction for Time-Domain In Vivo EPR 3D Multigradient Oximetric Imaging—A Parallel Processing Perspective

    Christopher D. Dharmaraj

    2009-01-01

    Full Text Available Three-dimensional Oximetric Electron Paramagnetic Resonance Imaging using the Single Point Imaging modality generates unpaired spin density and oxygen images that can readily distinguish between normal and tumor tissues in small animals. It is also possible with fast imaging to track the changes in tissue oxygenation in response to the oxygen content in the breathing air. However, this involves dealing with gigabytes of data for each 3D oximetric imaging experiment involving digital band pass filtering and background noise subtraction, followed by 3D Fourier reconstruction. This process is rather slow in a conventional uniprocessor system. This paper presents a parallelization framework using OpenMP runtime support and parallel MATLAB to execute such computationally intensive programs. The Intel compiler is used to develop a parallel C++ code based on OpenMP. The code is executed on four Dual-Core AMD Opteron shared memory processors, to reduce the computational burden of the filtration task significantly. The results show that the parallel code for filtration has achieved a speed up factor of 46.66 as against the equivalent serial MATLAB code. In addition, a parallel MATLAB code has been developed to perform 3D Fourier reconstruction. Speedup factors of 4.57 and 4.25 have been achieved during the reconstruction process and oximetry computation, for a data set with 23×23×23 gradient steps. The execution time has been computed for both the serial and parallel implementations using different dimensions of the data and presented for comparison. The reported system has been designed to be easily accessible even from low-cost personal computers through local internet (NIHnet. The experimental results demonstrate that the parallel computing provides a source of high computational power to obtain biophysical parameters from 3D EPR oximetric imaging, almost in real-time.

  10. Wakefield Simulation of CLIC PETS Structure Using Parallel 3D Finite Element Time-Domain Solver T3P

    Candel, A.; Kabel, A.; Lee, L.; Li, Z.; Ng, C.; Schussman, G.; Ko, K.; /SLAC; Syratchev, I.; /CERN

    2009-06-19

    In recent years, SLAC's Advanced Computations Department (ACD) has developed the parallel 3D Finite Element electromagnetic time-domain code T3P. Higher-order Finite Element methods on conformal unstructured meshes and massively parallel processing allow unprecedented simulation accuracy for wakefield computations and simulations of transient effects in realistic accelerator structures. Applications include simulation of wakefield damping in the Compact Linear Collider (CLIC) power extraction and transfer structure (PETS).

  11. Fractional Fourier transform for partially coherent beam in spatial-frequency domain

    Cai Yang-Jian; Lin Qiang

    2004-01-01

    By using Fourier transform and the tensor analysis method, the fractional Fourier transform (FRT) in the spatialfrequency domain for partially coherent beams is derived. Based on the FRT in the spatial-frequency domain, an analytical transform formula is derived for a partially coherent twisted anisotropic Gaussian-Schell model (GSM) beam passing through the FRT system. The connections between the FRT formula and the generalized diffraction integral formulae for partially coherent beams through an aligned optical system and a misaligned optical system in the spatialfrequency domain are discussed, separately. By using the derived formula, the intensity distribution of partially coherent twisted anisotropic GSM beams in the FRT plane are studied in detail. The formula derived provide a convenient tool for analysing and calculating the FRTs of the partially coherent beams in spatial-frequency domain.

  12. 3-D branching of magnetic domains on compressed si-fe steel with goss texture

    Perevertov, Oleksiy; Schaefer, R.; Stupakov, Oleksandr

    2014-01-01

    Roč. 50, č. 11 (2014), s. 2007804. ISSN 0018-9464 R&D Projects: GA ČR GB14-36566G; GA ČR GA13-18993S Institutional support: RVO:68378271 Keywords : grain-oriented silicon steel * Kerr microscopy * magnetic domains * stress Subject RIV: BM - Solid Matter Physics ; Magnetism Impact factor: 1.386, year: 2014

  13. Multi-domain, higher order level set scheme for 3D image segmentation on the GPU

    Sharma, Ojaswa; Zhang, Qin; Anton, François;

    2010-01-01

    evaluate level set surfaces that are $C^2$ continuous, but are slow due to high computational burden. In this paper, we provide a higher order GPU based solver for fast and efficient segmentation of large volumetric images. We also extend the higher order method to multi-domain segmentation. Our streaming...

  14. Contribution of Topological Domains and Loop Formation to 3D Chromatin Organization

    Vuthy Ea

    2015-07-01

    Full Text Available Recent investigations on 3D chromatin folding revealed that the eukaryote genomes are both highly compartmentalized and extremely dynamic. This review presents the most recent advances in topological domains’ organization of the eukaryote genomes and discusses the relationship to chromatin loop formation. CTCF protein appears as a central factor of these two organization levels having either a strong insulating role at TAD borders, or a weaker architectural role in chromatin loop formation. TAD borders directly impact on chromatin dynamics by restricting contacts within specific genomic portions thus confining chromatin loop formation within TADs. We discuss how sub-TAD chromatin dynamics, constrained into a recently described statistical helix conformation, can produce functional interactions by contact stabilization.

  15. Open-geometry Fourier modal method: modeling nanophotonic structures in infinite domains

    Häyrynen, Teppo; de Lasson, Jakob Rosenkrantz; Gregersen, Niels

    2016-01-01

    We present an open-geometry Fourier modal method based on a new combination of open boundary conditions and an efficient k-space discretization. The open boundary of the computational domain is obtained using basis functions that expand the whole space, and the integrals subsequently appearing due...... freedom, which may pave the way for more accurate and efficient modeling of open nanophotonic structures....

  16. Uniform regularity and vanishing dissipation limit for the full compressible Navier-Stokes system in 3-D bounded domain

    Yong, Wang

    2015-01-01

    In the present paper, we study the uniform regularity and vanishing dissipation limit for the full compressible Navier-Stokes system whose viscosity and heat conductivity are allowed to vanish at different order. The problem is studied in a 3-D bounded domain with Navier-slip type boundary conditions \\eqref{1.9}. It is shown that there exists a unique strong solution to the full compressible Navier-Stokes system with the boundary conditions \\eqref{1.9} in a finite time interval which is indep...

  17. Massive parallelization of a 3D finite difference electromagnetic forward solution using domain decomposition methods on multiple CUDA enabled GPUs

    Schultz, A.

    2010-12-01

    3D forward solvers lie at the core of inverse formulations used to image the variation of electrical conductivity within the Earth's interior. This property is associated with variations in temperature, composition, phase, presence of volatiles, and in specific settings, the presence of groundwater, geothermal resources, oil/gas or minerals. The high cost of 3D solutions has been a stumbling block to wider adoption of 3D methods. Parallel algorithms for modeling frequency domain 3D EM problems have not achieved wide scale adoption, with emphasis on fairly coarse grained parallelism using MPI and similar approaches. The communications bandwidth as well as the latency required to send and receive network communication packets is a limiting factor in implementing fine grained parallel strategies, inhibiting wide adoption of these algorithms. Leading Graphics Processor Unit (GPU) companies now produce GPUs with hundreds of GPU processor cores per die. The footprint, in silicon, of the GPU's restricted instruction set is much smaller than the general purpose instruction set required of a CPU. Consequently, the density of processor cores on a GPU can be much greater than on a CPU. GPUs also have local memory, registers and high speed communication with host CPUs, usually through PCIe type interconnects. The extremely low cost and high computational power of GPUs provides the EM geophysics community with an opportunity to achieve fine grained (i.e. massive) parallelization of codes on low cost hardware. The current generation of GPUs (e.g. NVidia Fermi) provides 3 billion transistors per chip die, with nearly 500 processor cores and up to 6 GB of fast (DDR5) GPU memory. This latest generation of GPU supports fast hardware double precision (64 bit) floating point operations of the type required for frequency domain EM forward solutions. Each Fermi GPU board can sustain nearly 1 TFLOP in double precision, and multiple boards can be installed in the host computer system. We

  18. Efficient 3D Acoustic Numerical modeling in the Logarithmic-grid using the Expanding Domain Method

    Hong, B. R.; Chung, W.; Ko, H.; Bae, H. S.

    2015-12-01

    In the numerical modeling of seismic wave propagation by the use of a discrete computing domain, dispersion analysis is preceded by the determination of the spatial grid spacings in order to ensure accurate modeling results. Grid spacing is a function of wavelength, and the wavelength depends on the minimum velocity and maximum source frequency. Therefore, as the frequency increases, the number of grids increase and this leads to computational overburden. In order to reduce the computing complexity, coordinate transformation techniques such as Riemannian coordinates and logarithmic grid sets are proposed. Riemannian wave-field extrapolation is a way to reformulate the wave-field by expressing it in Riemannian coordinates. In the logarithmic grid, grid spacing changes logarithmically, so this enables us to reduce the number of grids compared to a conventional grid set. Furthermore, this could completely remove boundary reflections by extending the model dimensions. However, numerical modeling in the logarithmic grid is still inefficient because it is performed for whole model at every individual time step. In this study we applied the expanding domain method to the logarithmic modeling in order to improve computational efficiency. This method, based on amplitude comparison, excludes computations for zero wave-fields by considering a non-zero domain boundary. Numerical examples demonstrated that our new modeling method enhances computational efficiency maintaining accuracy compared with conventional modeling methods. In wider and higher-order dimensions, particularly, the efficiency of our modeling method increased. Our new modeling technique could also be applied to the generation of underwater target echo signals requiring high frequency analysis.

  19. Multi-domain, higher order level set scheme for 3D image segmentation on the GPU

    Sharma, Ojaswa; Zhang, Qin; Anton, François; Bajaj, Chandrajit

    evaluate level set surfaces that are $C^2$ continuous, but are slow due to high computational burden. In this paper, we provide a higher order GPU based solver for fast and efficient segmentation of large volumetric images. We also extend the higher order method to multi-domain segmentation. Our streaming......Level set method based segmentation provides an efficient tool for topological and geometrical shape handling. Conventional level set surfaces are only $C^0$ continuous since the level set evolution involves linear interpolation to compute derivatives. Bajaj et al. present a higher order method to...

  20. The Fourier-finite-element approximation of the lame equations in axisymmetric domains with edges

    This paper is concerned with a priori error estimates and convergence analysis of the Fourier-finite-element solutions of the Neumann problem for the Lame equations in axisymmetric domains Ω-circumflex is contained in R3 with reentrant edges. The Fourier-FEM combines the approximating Fourier method with respect to the rotational angle using trigonometric polynomials of degree N (N →∞), with the finite-element method on the plane meridian domain of Ω-circumflex with mesh size h (h → 0) for approximating the Fourier coefficients. The asymptotic behavior of the solution near reentrant edges is described by singular functions in non-tensor product form and treated numerically by means of finite element method on locally graded meshes. For the right-hand side f-circumflex is an element of (L2(Ω-circumflex))3, it is proved that the rate of convergence of the combined approximations in the norms of (W21(Ω-circumflex))3 is of the order O(h2-l +N-(2-l)) (l=0,1). (author)

  1. Efficient method for localized functions using domain transformation and Fourier sine series

    Jovanovic, Raka; Alharbi, Fahhad H

    2014-01-01

    An efficient approach to handle localized states by using spectral methods (SM) in one and three dimensions is presented. The method consists of transformation of the infinite domain to the bounded domain in $(0, \\pi)$ and using the Fourier sine series as a set of basis functions for the SM. It is shown that with an appropriate choice of transformation functions, this method manages to preserve the good properties of original SMs; more precisely, superb computational efficiency when high level of accuracy is necessary. This is made possible by analytically exploiting the properties of the transformation function and the Fourier sine series. An especially important property of this approach is the possibility of calculating the Hartree energy very efficiently. This is done by exploiting the positive properties of the sine series as a basis set and conducting an extinctive part of the calculations analytically. We illustrate the efficiency of this method and implement it to solve the Poisson's and Helmholtz equ...

  2. Reproducibility of Scleral Spur Identification and Angle Measurements Using Fourier Domain Anterior Segment Optical Coherence Tomography

    Ricardo J. Cumba; Sunita Radhakrishnan; Nicholas P. Bell; Kundandeep S. Nagi; Alice Z. Chuang; Lin, Shan C.; Mankiewicz, Kimberly A.; Feldman, Robert M.

    2012-01-01

    Purpose. To evaluate intraobserver and interobserver agreement in locating the scleral spur landmark (SSL) and anterior chamber angle measurements obtained using Fourier Domain Anterior Segment Optical Coherence Tomography (ASOCT) images. Methods. Two independent, masked observers (SR and AZC) identified SSLs on ASOCT images from 31 eyes with open and nonopen angles. A third independent reader, NPB, adjudicated SSL placement if identifications differed by more than 80  μ m. Nine months later,...

  3. Joint multi-mode dispersion extraction in Fourier and space time domains

    Bose, Sandip; Valero, Henri-Pierre

    2013-01-01

    In this paper we present a novel broadband approach for the extraction of dispersion curves of multiple time frequency overlapped dispersive modes such as in borehole acoustic data. The new approach works jointly in the Fourier and space time domains and, in contrast to existing space time approaches that mainly work for time frequency separated signals, efficiently handles multiple signals with significant time frequency overlap. The proposed method begins by exploiting the slowness (phase and group) and time location estimates based on frequency-wavenumber (f-k) domain sparsity penalized broadband dispersion extraction method as presented in \\cite{AeronTSP2011}. In this context we first present a Cramer Rao Bound (CRB) analysis for slowness estimation in the (f-k) domain and show that for the f-k domain broadband processing, group slowness estimates have more variance than the phase slowness estimates and time location estimates. In order to improve the group slowness estimates we exploit the time compactne...

  4. Optimal fourth-order staggered-grid finite-difference scheme for 3D frequency-domain viscoelastic wave modeling

    Li, Y.; Han, B.; Métivier, L.; Brossier, R.

    2016-09-01

    We investigate an optimal fourth-order staggered-grid finite-difference scheme for 3D frequency-domain viscoelastic wave modeling. An anti-lumped mass strategy is incorporated to minimize the numerical dispersion. The optimal finite-difference coefficients and the mass weighting coefficients are obtained by minimizing the misfit between the normalized phase velocities and the unity. An iterative damped least-squares method, the Levenberg-Marquardt algorithm, is utilized for the optimization. Dispersion analysis shows that the optimal fourth-order scheme presents less grid dispersion and anisotropy than the conventional fourth-order scheme with respect to different Poisson's ratios. Moreover, only 3.7 grid-points per minimum shear wavelength are required to keep the error of the group velocities below 1%. The memory cost is then greatly reduced due to a coarser sampling. A parallel iterative method named CARP-CG is used to solve the large ill-conditioned linear system for the frequency-domain modeling. Validations are conducted with respect to both the analytic viscoacoustic and viscoelastic solutions. Compared with the conventional fourth-order scheme, the optimal scheme generates wavefields having smaller error under the same discretization setups. Profiles of the wavefields are presented to confirm better agreement between the optimal results and the analytic solutions.

  5. GRID2D/3D: A computer program for generating grid systems in complex-shaped two- and three-dimensional spatial domains. Part 1: Theory and method

    Shih, T. I.-P.; Bailey, R. T.; Nguyen, H. L.; Roelke, R. J.

    1990-01-01

    An efficient computer program, called GRID2D/3D was developed to generate single and composite grid systems within geometrically complex two- and three-dimensional (2- and 3-D) spatial domains that can deform with time. GRID2D/3D generates single grid systems by using algebraic grid generation methods based on transfinite interpolation in which the distribution of grid points within the spatial domain is controlled by stretching functions. All single grid systems generated by GRID2D/3D can have grid lines that are continuous and differentiable everywhere up to the second-order. Also, grid lines can intersect boundaries of the spatial domain orthogonally. GRID2D/3D generates composite grid systems by patching together two or more single grid systems. The patching can be discontinuous or continuous. For continuous composite grid systems, the grid lines are continuous and differentiable everywhere up to the second-order except at interfaces where different single grid systems meet. At interfaces where different single grid systems meet, the grid lines are only differentiable up to the first-order. For 2-D spatial domains, the boundary curves are described by using either cubic or tension spline interpolation. For 3-D spatial domains, the boundary surfaces are described by using either linear Coon's interpolation, bi-hyperbolic spline interpolation, or a new technique referred to as 3-D bi-directional Hermite interpolation. Since grid systems generated by algebraic methods can have grid lines that overlap one another, GRID2D/3D contains a graphics package for evaluating the grid systems generated. With the graphics package, the user can generate grid systems in an interactive manner with the grid generation part of GRID2D/3D. GRID2D/3D is written in FORTRAN 77 and can be run on any IBM PC, XT, or AT compatible computer. In order to use GRID2D/3D on workstations or mainframe computers, some minor modifications must be made in the graphics part of the program; no

  6. Sampling reconstruction of N-dimensional bandlimited images after multilinear filtering in fractional Fourier domain

    Wei, Deyun; Li, Yuanmin

    2013-05-01

    This paper addresses the problem of multidimensional signal reconstruction from generalized samples in fractional Fourier domain including the deterministic case and the stochastic case. The generalized sampling expansion is investigated for the case where the fractional bandlimited input depends on N real variable, i.e., f(t)=f(t1,⋯,tN) and is used as a common input to a parallel bank of m independent N dimensional linear fractional Fourier filters Hα,k(u), k=1,⋯,m. For the deterministic input, the input is assumed to have its N dimensional fractional Fourier transform bandlimited to the frequency rang |ui|≤Ωi, for i=1,⋯,N. If m, the number of fractional Fourier filters, is written as a product of positive integers in the form m=m1m2⋯mN, and if the fractional bandlimited input f(t) is processed by fractional Fourier filter Hα,k(u)resulting m outputs gk(t), then f(t) can be reconstructed in terms of the samples gk(nT), each output being sampled at the identical rates of Ω1 csc α/m1π, Ω2 csc α/m2π,⋯, ΩN csc α/mNπ samples/second in t1,⋯,tN respectively. This contrasts with the rates of Ω1 csc α/π, Ω2 csc α/π,⋯, ΩN csc α/π in t1,⋯,tN needed for reconstruction of the unfiltered input f(t). Input sampling expansions in terms of samples of the output filters are given for both deterministic and stochastic inputs, the generalized sampling expansion for random input having the same form as for the deterministic case but interpreted in the mean-square sense. Our formulation and results are general and include derivative sampling and periodic nonuniform sampling in the fractional Fourier domain for multidimensional signals as special case. Finally, the potensional application of the multidimensional generalized sampling is presented to show the advantage of the theory. Especially, the application of multidimensional generalized sampling in the context of the image scaling about image super-resolution is

  7. Evaluation of proton-recoil-spectra including inverse filtering in the Fourier domain

    The evaluation of proton recoil spectra having large statistical fluctuations can be improved by the following operations in Fourier domain: smoothing, using a Gaussian function as low pass frequency filter and inverse filtering with the measured response function before multiplying by -2πiν as differentiation. This results in pure Gaussian shapes for the neutron lines. The line intensities are then no longer influenced by correlated ripples outside the lines and the errors in determining the line intensities are reduced by widening by lines. (orig.)

  8. High-resolution retinal imaging using adaptive optics and Fourier-domain optical coherence tomography

    Olivier, Scot S.; Werner, John S.; Zawadzki, Robert J.; Laut, Sophie P.; Jones, Steven M.

    2010-09-07

    This invention permits retinal images to be acquired at high speed and with unprecedented resolution in three dimensions (4.times.4.times.6 .mu.m). The instrument achieves high lateral resolution by using adaptive optics to correct optical aberrations of the human eye in real time. High axial resolution and high speed are made possible by the use of Fourier-domain optical coherence tomography. Using this system, we have demonstrated the ability to image microscopic blood vessels and the cone photoreceptor mosaic.

  9. Measurement of intraocular distances in human eyes by using Fourier domain low-coherence interferometry

    Feng, Liang; Zhu, Lida; Li, Qinghua; Ma, Zhenhe; Wang, Bo; Wang, Yi

    2016-03-01

    We introduce a system for rapidly measuring the intraocular distances of human eyes in vivo with high sensitivity by using Fourier domain low-coherence interferometry. The system mainly consisting of a rapid focus displacement unit and a reference arm which has a variable optical path length. This system is capable of providing a complete biometrical assessment of a human eye in a single measurement procedure, including cornea thickness, anterior chamber depth, lens thickness, and axial length. The system is experimentally verified by measuring the four parameters of a human eye in vivo.

  10. Convergence Properties of Generalized Fourier Series on a Parallel Hexagon Domain

    WANG SHU-YUN; LIANG XUE-ZHANG; FU YAO; SUN XUE-NAN

    2009-01-01

    A new Rogosinski-type kernel function is constructed using kernel function of partial sums Sn(f; t) of generalized Fourier series on a parallel hexagon domain Ω associating with three-direction partition. We prove that an operator Wn(f; t) with the new kernel function converges uniformly to any continuous function f(t) ∈ C*(Ω) (the space of all continuous functions with period Ω) on Ω. Moreover, the convergence order of the operator is presented for the smooth approached function.

  11. In-vivo Fourier domain optical coherence tomography as a new tool for investigation of vasodynamics in the mouse model

    Meissner, Sven; Müller, Gregor; Walther, Julia; Morawietz, Henning; Koch, Edmund

    2009-05-01

    In-vivo imaging of the vascular system can provide novel insight into the dynamics of vasoconstriction and vasodilation. Fourier domain optical coherence tomography (FD-OCT) is an optical, noncontact imaging technique based on interferometry of short-coherent near-infrared light with axial resolution of less than 10 μm. In this study, we apply FD-OCT as an in-vivo imaging technique to investigate blood vessels in their anatomical context using temporally resolved image stacks. Our chosen model system is the murine saphenous artery and vein, due to their small inner vessel diameters, sensitive response to vasoactive stimuli, and advantageous anatomical position. The vascular function of male wild-type mice (C57BL/6) is determined at the ages of 6 and 20 weeks. Vasoconstriction is analyzed in response to dermal application of potassium (K+), and vasodilation in response to sodium nitroprusside (SNP). Vasodynamics are quantified from time series (75 sec, 4 frames per sec, 330×512 pixels per frame) of cross sectional images that are analyzed by semiautomated image processing software. The morphology of the saphenous artery and vein is determined by 3-D image stacks of 512×512×512 pixels. Using the FD-OCT technique, we are able to demonstrate age-dependent differences in vascular function and vasodynamics.

  12. Visualization of hair follicles using high-speed optical coherence tomography based on a Fourier domain mode locking laser

    Tsai, M.-T.; Chang, F.-Y.

    2012-04-01

    In this study, a swept-source optical coherence tomography (SS-OCT) system with a Fourier domain mode locking (FDML) laser is proposed for a dermatology study. The homemade FDML laser is one kind of frequency-sweeping light source, which can provide output power of >20 mW and an output spectrum of 65 nm in bandwidth centered at 1300 nm, enabling imaging with an axial resolution of 12 μm in the OCT system. To eliminate the forward scans from the laser output and insert the delayed backward scans, a Mach-Zehnder configuration is implemented. Compared with conventional frequency-sweeping light sources, the FDML laser can achieve much higher scan rates, as high as ˜240 kHz, which can provide a three-dimensional imaging rate of 4 volumes/s. Furthermore, the proposed high-speed SS-OCT system can provide three-dimensional (3D) images with reduced motion artifacts. Finally, a high-speed SS-OCT system is used to visualize hair follicles, demonstrating the potential of this technology as a tool for noninvasive diagnosis of alopecia.

  13. Ultrahigh-speed imaging of the rat retina using ultrahigh-resolution spectral/Fourier domain OCT

    Liu, Jonathan J.; Potsaid, Benjamin; Chen, Yueli; Gorczynska, Iwona; Srinivasan, Vivek J.; Duker, Jay S.; Fujimoto, James G.

    2010-02-01

    We performed OCT imaging of the rat retina at 70,000 axial scans per second with ~3 μm axial resolution. Three-dimensional OCT (3D-OCT) data sets of the rat retina were acquired. The high speed and high density data sets enable improved en face visualization by reducing eye motion artifacts and improve Doppler OCT measurements. Minimal motion artifacts were visible and the OCT fundus images offer more precise registration of individual OCT images to retinal fundus features. Projection OCT fundus images show features such as the nerve fiber layer, retinal capillary networks and choroidal vasculature. Doppler OCT images and quantitative measurements show pulsatility in retinal blood vessels. Doppler OCT provides noninvasive in vivo quantitative measurements of retinal blood flow properties and may benefit studies of diseases such as glaucoma and diabetic retinopathy. Ultrahigh speed imaging using ultrahigh resolution spectral / Fourier domain OCT promises to enable novel protocols for measuring small animal retinal structure and retinal blood flow. This non-invasive imaging technology is a promising tool for monitoring disease progression in rat and mouse models to assess ocular disease pathogenesis and response to treatment.

  14. Homogenization of the evolution Stokes equation in a perforated domain with a stochastic Fourier boundary condition

    Bessaih, Hakima

    2015-04-01

    The evolution Stokes equation in a domain containing periodically distributed obstacles subject to Fourier boundary condition on the boundaries is considered. We assume that the dynamic is driven by a stochastic perturbation on the interior of the domain and another stochastic perturbation on the boundaries of the obstacles. We represent the solid obstacles by holes in the fluid domain. The macroscopic (homogenized) equation is derived as another stochastic partial differential equation, defined in the whole non perforated domain. Here, the initial stochastic perturbation on the boundary becomes part of the homogenized equation as another stochastic force. We use the twoscale convergence method after extending the solution with 0 in the holes to pass to the limit. By Itô stochastic calculus, we get uniform estimates on the solution in appropriate spaces. In order to pass to the limit on the boundary integrals, we rewrite them in terms of integrals in the whole domain. In particular, for the stochastic integral on the boundary, we combine the previous idea of rewriting it on the whole domain with the assumption that the Brownian motion is of trace class. Due to the particular boundary condition dealt with, we get that the solution of the stochastic homogenized equation is not divergence free. However, it is coupled with the cell problem that has a divergence free solution. This paper represents an extension of the results of Duan and Wang (Comm. Math. Phys. 275:1508-1527, 2007), where a reaction diffusion equation with a dynamical boundary condition with a noise source term on both the interior of the domain and on the boundary was studied, and through a tightness argument and a pointwise two scale convergence method the homogenized equation was derived. © American Institute of Mathematical Sciences.

  15. A method for estimating spatial resolution of real image in the Fourier domain

    Mizutani, Ryuta; Takekoshi, Susumu; Inomoto, Chie; Nakamura, Naoya; Itokawa, Masanari; Arai, Makoto; Oshima, Kenichi; Takeuchi, Akihisa; Uesugi, Kentaro; Terada, Yasuko; Suzuki, Yoshio

    2016-01-01

    Spatial resolution is a fundamental parameter in structural sciences. In crystallography, the resolution is determined from the detection limit of high-angle diffraction in reciprocal space. In electron microscopy, correlation in the Fourier domain is used for estimating the resolution. In this paper, we report a method for estimating the spatial resolution of real images from a logarithmic intensity plot in the Fourier domain. The logarithmic intensity plots of test images indicated that the full width at half maximum of a Gaussian point-spread function can be estimated from the images. The spatial resolution of imaging X-ray microtomography using Fresnel zone-plate optics was also estimated with this method. A cross section of a test object visualized with the imaging microtomography indicated that square-wave patterns up to 120-nm pitch were resolved. The logarithmic intensity plot was calculated from a tomographic cross section of brain tissue. The full width at half maximum of the point spread function e...

  16. Robust Global Image Registration Based on a Hybrid Algorithm Combining Fourier- and Spatial-domain Techniques

    Crabtree, P.; McNicholl, P.; Seanor, C.; Murray-Krezan, J.

    2012-09-01

    A variety of image registration techniques have been investigated for applications such as image analysis, fusion, compression, enhancement, and creating mosaics. In particular, robust registration is a key component for successful multi-frame processing aimed at super-resolution or high dynamic range imaging. Image registration techniques are broadly categorized as global (area) or feature-based, and can also be classified as being performed in either the Fourier- or spatial-domain. Spatial domain methods are typically used for applications requiring accurate estimation of sub-pixel motion, such as multi-frame super-resolution based on de-aliasing. However, these techniques often rely on the availability of a priori information (good initial guess), and are therefore limited in terms of the dynamic range of the global motion estimates. A Gaussian pyramid approach is one standard method for extending the region of convergence of spatial domain techniques. On the other hand, Fourier domain-based correlation techniques such as the log-polar FFT method provide fast and reasonably accurate estimates of global shifts, rotation, and uniform scale changes, and tend to perform well over a large range of frame-to-frame motion magnitudes. In this paper we explore several possible hybrid algorithms for robust global registration based on combining the log-polar FFT and spatial-domain techniques. This includes the straightforward use of the log-polar FFT algorithm to generate an initial guess for use by a spatial domain algorithm, as well as the intertwining of the two methods by applying both global correlation and spatial domain registration at each relevant step within the log-polar FFT algorithm. In addition, we explore the benefits of normalized gradient correlation in performing the coarse log-polar FFT registration. The use of normalized gradient correlation, as opposed to phase-only correlation, has recently been proposed for improving the log-polar FFT method in terms

  17. Gabor-domain optical coherence microscopy with integrated dual-axis MEMS scanner for fast 3D imaging and metrology

    Canavesi, Cristina; Cogliati, Andrea; Hayes, Adam; Santhanam, Anand P.; Tankam, Patrice; Rolland, Jannick P.

    2015-10-01

    Fast, robust, nondestructive 3D imaging is needed for characterization of microscopic structures in industrial and clinical applications. A custom micro-electromechanical system (MEMS)-based 2D scanner system was developed to achieve 55 kHz A-scan acquisition in a Gabor-domain optical coherence microscopy (GD-OCM) instrument with a novel multilevel GPU architecture for high-speed imaging. GD-OCM yields high-definition volumetric imaging with dynamic depth of focusing through a bio-inspired liquid lens-based microscope design, which has no moving parts and is suitable for use in a manufacturing setting or in a medical environment. A dual-axis MEMS mirror was chosen to replace two single-axis galvanometer mirrors; as a result, the astigmatism caused by the mismatch between the optical pupil and the scanning location was eliminated and a 12x reduction in volume of the scanning system was achieved. Imaging at an invariant resolution of 2 μm was demonstrated throughout a volume of 1 × 1 × 0.6 mm3, acquired in less than 2 minutes. The MEMS-based scanner resulted in improved image quality, increased robustness and lighter weight of the system - all factors that are critical for on-field deployment. A custom integrated feedback system consisting of a laser diode and a position-sensing detector was developed to investigate the impact of the resonant frequency of the MEMS and the driving signal of the scanner on the movement of the mirror. Results on the metrology of manufactured materials and characterization of tissue samples with GD-OCM are presented.

  18. EUROPEANA AND 3D

    D. Pletinckx

    2012-09-01

    Full Text Available The current 3D hype creates a lot of interest in 3D. People go to 3D movies, but are we ready to use 3D in our homes, in our offices, in our communication? Are we ready to deliver real 3D to a general public and use interactive 3D in a meaningful way to enjoy, learn, communicate? The CARARE project is realising this for the moment in the domain of monuments and archaeology, so that real 3D of archaeological sites and European monuments will be available to the general public by 2012. There are several aspects to this endeavour. First of all is the technical aspect of flawlessly delivering 3D content over all platforms and operating systems, without installing software. We have currently a working solution in PDF, but HTML5 will probably be the future. Secondly, there is still little knowledge on how to create 3D learning objects, 3D tourist information or 3D scholarly communication. We are still in a prototype phase when it comes to integrate 3D objects in physical or virtual museums. Nevertheless, Europeana has a tremendous potential as a multi-facetted virtual museum. Finally, 3D has a large potential to act as a hub of information, linking to related 2D imagery, texts, video, sound. We describe how to create such rich, explorable 3D objects that can be used intuitively by the generic Europeana user and what metadata is needed to support the semantic linking.

  19. INTERFERENCE MITIGATING BASED ON FRACTIONAL FOURIER TRANSFORM IN TRANSFORM DOMAIN COMMUNICATION SYSTEM

    Wang Chuandan; Zhang Zhongpei; Li Shaoqian

    2007-01-01

    The method of FRactional Fourier Transform (FRFT) is introduced to Transform Domain Communication System (TDCS) for signal transforming in the paper after theoretical analysis. The method yields optimal Basis Function (BF) by FRFT with optimal transform angle. The TDCS using the proposed method has wider usable spectrum, stronger robustness and better ability of anti non-stationary jamming than using usual methods, such as Fourier Transform (FT), Auto Regressive (AR), Wavelet Transform (WT), etc. The main simulation results are as follows. First, the Bit Error Rate (BER) Pb is close to theoretical bound of no jamming no matter in single tone or in linear chirp interference. Second, the interference-to-signal ratio J/E is at least 12dB more than that of Direct Spread Spectrum System (DSSS) under the same BER if the spectrum hopping-to-signal ratio is 1:20 in chirp plus hopping interfering. Third, the Eb/No (when estimation difference is 90% between transmitter and receiver) is about 3.5dB or about 0.5dB (when estimation difference is 10% between transmitter and receiver) more than that of theoretical result when no estimation difference under Pb = 10-2.

  20. MEMS motor-based common-path endoscopic Fourier-domain OCT

    Wang, Rui; Yun, Julie X.; Yuan, Xiaocong; Li, Bo; Goodwin, Richard; Markwald, Roger; Gao, Bruce

    2011-03-01

    A rotational microelectromechanical(MEMS) motor based common-path Fourier-domain OCT for endoscopic imaging, which uses the interface between the index-match oil and distal-end surface of the fiber as a self-aligned reference mirror, is reported. The reference intensity is easy to be tuned by altering the index of the match oil to optimize the signal to noise ratio of the system. An external Michelson interferometer is used to compensate for the optical path difference and dispersion mismatch to the index-match oil and the GRIN lens. Due to this common-path design, the OCT signal is immune to bending or stretching of the endoscopic catheter. The outer diameter of the probe is 3 mm, and 22 circumferential-scans and 50,000 lines A-scans are obtained in one second.

  1. Color image encryption using iterative phase retrieve process in quaternion Fourier transform domain

    Sui, Liansheng; Duan, Kuaikuai

    2015-02-01

    A single-channel color image encryption method is proposed based on iterative phase iterative process in quaternion Fourier transform domain. First, three components of the plain color image is confused respectively by using cat map. Second, the confused components are combined into a pure quaternion image, which is encode to the phase only function by using an iterative phase retrieval process. Finally, the phase only function is encrypted into the gray scale ciphertext with stationary white noise distribution based on the chaotic diffusion, which has camouflage property to some extent. The corresponding plain color image can be recovered from the ciphertext only with correct keys in the decryption process. Simulation results verify the feasibility and effectiveness of the proposed method.

  2. Double image encryption based on random phase encoding in the fractional Fourier domain.

    Tao, Ran; Xin, Yi; Wang, Yue

    2007-11-26

    A novel image encryption method is proposed by utilizing random phase encoding in the fractional Fourier domain to encrypt two images into one encrypted image with stationary white distribution. By applying the correct keys which consist of the fractional orders, the random phase masks and the pixel scrambling operator, the two primary images can be recovered without cross-talk. The decryption process is robust against the loss of data. The phase-based image with a larger key space is more sensitive to keys and disturbances than the amplitude-based image. The pixel scrambling operation improves the quality of the decrypted image when noise perturbation occurs. The novel approach is verified by simulations. PMID:19550895

  3. Fourier domain mode-locked swept source at 1050 nm based on a tapered amplifier

    Marschall, Sebastian; Klein, Thomas; Wieser, Wolfgang;

    2010-01-01

    While swept source optical coherence tomography (OCT) in the 1050 nm range is promising for retinal imaging, there are certain challenges. Conventional semiconductor gain media have limited output power, and the performance of high-speed Fourier domain mode-locked (FDML) lasers suffers from...... air (~11 μm in tissue) in OCT measurements. As our work shows, tapered amplifiers are suitable gain media for swept sources at 1050 nm with increased output power, while high gain counteracts dispersion effects in an FDML laser....... achieved stable FDML operation, exploiting the full bandwidth of the tapered amplifier despite high dispersion. The light source operates at a repetition rate of 116 kHz with an effective average output power in excess of 30 mW. With a total sweep range of 70 nm, we achieved an axial resolution of 15 μm in...

  4. Programmable multiple true-time-delay elements based on a Fourier-domain optical processor.

    Yi, Xiaoke; Li, Liwei; Huang, Thomas X H; Minasian, Robert A

    2012-02-15

    A new technique to realize an array of multiple true-time-delay elements, which can be independently and continuously tuned, is reported. It is based on a WDM parallel signal processing approach in conjunction with a diffraction-based Fourier-domain optical signal processor. Programmable linear optical phase transfer functions are realized to obtain different electrical true-time delays. The technique can scale to a large number of wideband true-time-delay lines, with continuously tunable programmable delay. Results demonstrate multiple true-time-delay elements with independent tuning control and verify the concept by tuning the free spectral range of a microwave photonic notch filter. To our best knowledge, this is the first demonstration of multiple independently controllable true-time-delay lines for microwave photonic systems. PMID:22344122

  5. A novel parameter-induced stochastic resonance phenomena in fractional Fourier domain

    Lin, Lifeng; Wang, Huiqi; Lv, Wangyong; Zhong, Suchuan

    2016-08-01

    The parameter-induced stochastic resonance (SR) phenomenon in a novel self-adaptive dynamical system driven by linear frequency modulated (LFM) signal and additive noise is considered from the view of the signal-to-noise ratio (SNR). It is found that the dynamical system can be perfectly analyzed by equivalently transforming it into a traditional first-order linear dynamical system driven by periodic signal and additive noise in fractional Fourier transform (FrFT) domain with an optimal rotated angle, and the theoretical analysis and simulation results show that output SNR exhibits the SR behavior when it is plotted as a function of the system parameter. Furthermore, the optimal value of adjusted parameter is obtained, and the possible area of SNR gain is theoretically determined only by center-frequency and modulated frequency of the driving LFM signal.

  6. Broadband Fourier domain mode-locked laser for optical coherence tomography at 1060 nm

    Marschall, Sebastian; Klein, Thomas; Wieser, Wolfgang;

    2012-01-01

    Optical coherence tomography (OCT) in the 1060nm range is interesting for in vivo imaging of the human posterior eye segment (retina, choroid, sclera) due to low absorption in water and deep penetration into the tissue. Rapidly tunable light sources, such as Fourier domain mode-locked (FDML) lasers......, enable acquisition of densely sampled three-dimensional datasets covering a wide field of view. However, semiconductor optical amplifiers (SOAs)-the typical laser gain media for swept sources-for the 1060nm band could until recently only provide relatively low output power and bandwidth. We have...... implemented an FDML laser using a new SOA featuring broad gain bandwidth and high output power. The output spectrum coincides with the wavelength range of minimal water absorption, making the light source ideal for OCT imaging of the posterior eye segment. With a moderate SOA current (270 mA) we achieve up...

  7. Open geometry Fourier modal method: Modeling nanophotonic structures in infinite domains

    Häyrynen, Teppo; Gregersen, Niels

    2016-01-01

    We present an open geometry Fourier modal method based on a new combination of open boundary conditions and an efficient $k$-space discretization. The open boundary of the computational domain is obtained using basis functions that expand the whole space, and the integrals subsequently appearing due to the continuous nature of the radiation modes are handled using a discretization based on non-uniform sampling of the $k$-space. We apply the method to a variety of photonic structures and demonstrate that our method leads to significantly improved convergence with respect to the number of degrees of freedom, which may pave the way for more accurate and efficient modeling of open nanophotonic structures.

  8. Time-encoded Raman scattering (TICO-Raman) with Fourier domain mode locked (FDML) lasers

    Karpf, Sebastian; Eibl, Matthias; Wieser, Wolfgang; Klein, Thomas; Huber, Robert

    2015-07-01

    We present a new concept for performing stimulated Raman spectroscopy and microscopy by employing rapidly wavelength swept Fourier Domain Mode locked (FDML) lasers [1]. FDML lasers are known for fastest imaging in swept-source optical coherence tomography [2, 3]. We employ this continuous and repetitive wavelength sweep to generate broadband, high resolution stimulated Raman spectra with a new, time-encoded (TICO) concept [4]. This allows for encoding and detecting the stimulated Raman gain on the FDML laser intensity directly in time. Therefore we use actively modulated pump lasers, which are electronically synchronized to the FDML laser, in combination with a fast analog-to-digital converter (ADC) at 1.8 GSamples/s. We present hyperspectral Raman images with color-coded, molecular contrast.

  9. Boundary layers and incompressible Navier-Stokes-Fourier limit of the Boltzmann Equation in Bounded Domain (I)

    Jiang, Ning; Masmoudi, Nader

    2015-01-01

    We establish the incompressible Navier-Stokes-Fourier limit for solutions to the Boltzmann equation with a general cut-off collision kernel in a bounded domain. Appropriately scaled families of DiPerna-Lions-(Mischler) renormalized solutions with Maxwell reflection boundary conditions are shown to have fluctuations that converge as the Knudsen number goes to zero. Every limit point is a weak solution to the Navier-Stokes-Fourier system with different types of boundary conditions depending on ...

  10. Optimal convergence recovery for the Fourier-finite-element approximation of Maxwell's equations in non-smooth axisymmetric domains

    Three-dimensional time-harmonic Maxwell's problems in axisymmetric domains Ω-circumflex with edges and conical points on the boundary are treated by means of the Fourier-finite-element method. The Fourier-fem combines the approximating Fourier series expansion of the solution with respect to the rotational angle using trigonometric polynomials of degree N (N → ∞), with the finite element approximation of the Fourier coefficients on the plane meridian domain Ωa is a subset of R+2 of Ω-circumflex with mesh size h (h → 0). The singular behaviors of the Fourier coefficients near angular points of the domain Ωa are fully described by suitable singular functions and treated numerically by means of the singular function method with the finite element method on graded meshes. It is proved that the rate of convergence of the mixed approximations in H1(Ω-circumflex)3 is of the order O (h+N-1) as known for the classical Fourier-finite-element approximation of problems with regular solutions. (author)

  11. The Wavenumber Algorithm: Fast Fourier-Domain Imaging Using Full Matrix Capture

    Hunter, A. J.; Drinkwater, B. W.; Wilcox, P. D.

    2009-03-01

    We develop a Fourier-domain approach to full matrix imaging based on the wavenumber algorithm used in synthetic aperture radar and sonar. The extension to the wavenumber algorithm for full matrix capture is described and the performance of the new algorithm is compared to the total focusing method (TFM), which we use as a representative benchmark for the time-domain algorithms. The wavenumber algorithm provides a mathematically rigorous solution to the inverse problem for the assumed forward wave propagation model, whereas the TFM employs heuristic delay-and-sum beamforming. Consequently, the wavenumber algorithm has an improved point-spread function and provides better imagery. However, the major advantage of the wavenumber algorithm is its superior computational performance. For large arrays and images, the wavenumber algorithm is several orders of magnitude faster than the TFM. On the other hand, the key advantage of the TFM is its flexibility. The wavenumber algorithm requires a regularly sampled linear array, while the TFM can handle arbitrary imaging geometries. The TFM and the wavenumber algorithm are compared using simulated and experimental data.

  12. Laplace-Fourier-Domain Full Waveform Inversion of Deep-Sea Seismic Data Acquired with Limited Offsets

    Cho, Yongchae; Ha, Wansoo; Kim, Youngseo; Shin, Changsoo; Singh, Satish; Park, Eunjin

    2016-03-01

    Laplace-Fourier-domain full waveform inversion is considered one of the most reliable schemes to alleviate the drawbacks of conventional frequency-domain inversion, such as local minima. Using a damped wavefield, we can reduce the possibility of converging to local minima and produce an accurate long-wavelength velocity model. Then, we can obtain final inversion results using high-frequency components and low damping coefficients. However, the imaging area is limited because this scheme uses a damped wavefield that makes the magnitudes of the gradient and residual small in deep areas. Generally, the imaging depth of Laplace-Fourier-domain full waveform inversion is half the streamer length. Thus, dealing with seismic data in the deep-sea layer is difficult. The deep-sea layer reduces the amplitude of signals and acts as an obstacle for computing an exact gradient image. To reduce the water layer's effect, we extrapolated the wavefield with a downward continuation and performed refraction tomography. Then, we performed Laplace-Fourier-domain full waveform inversion using the refraction tomography results as an initial model. After obtaining a final velocity model, we verified the inversion results using Kirchhoff migration. We presented common image gathers and a synthetic seismogram of Sumatra field data to prove the reliability of the velocity model obtained by Laplace-Fourier-domain full waveform inversion. Through the test, we concluded that Laplace-Fourier-domain full waveform inversion with refraction tomography of the downward-continued wavefield recovers the subsurface structures located at depth despite a relatively short streamer length compared to the water depth.

  13. A unified framework for 3D radiation therapy and IMRT planning: plan optimization in the beamlet domain by constraining or regularizing the fluence map variations

    The purpose of this work is to demonstrate that physical constraints on fluence gradients in 3D radiation therapy (RT) planning can be incorporated into beamlet optimization explicitly by direct constraint on the spatial variation of the fluence maps or implicitly by using total-variation regularization (TVR). The former method forces the fluence to vary in accordance with the known form of a wedged field and latter encourages the fluence to take the known form of the wedged field by requiring the derivatives of the fluence maps to be piece-wise constant. The performances of the proposed methods are evaluated by using a brain cancer case and a head and neck case. It is found that both approaches are capable of providing clinically sensible 3D RT solutions with monotonically varying fluence maps. For currently available 3D RT delivery schemes based on the use of customized physical or dynamic wedges, constrained optimization seems to be more useful because the optimized fields are directly deliverable. Working in the beamlet domain provides a natural way to model the spatial variation of the beam fluence. The proposed methods take advantage of the fact that 3D RT is a special form of intensity-modulated radiation therapy (IMRT) and finds the optimal plan by searching for fields with a certain type of spatial variation. The approach provides a unified framework for 3D CRT and IMRT plan optimization. (note)

  14. Combining Public Domain and Professional Panoramic Imagery for the Accurate and Dense 3d Reconstruction of the Destroyed Bel Temple in Palmyra

    Wahbeh, W.; Nebiker, S.; Fangi, G.

    2016-06-01

    This paper exploits the potential of dense multi-image 3d reconstruction of destroyed cultural heritage monuments by either using public domain touristic imagery only or by combining the public domain imagery with professional panoramic imagery. The focus of our work is placed on the reconstruction of the temple of Bel, one of the Syrian heritage monuments, which was destroyed in September 2015 by the so called "Islamic State". The great temple of Bel is considered as one of the most important religious buildings of the 1st century AD in the East with a unique design. The investigations and the reconstruction were carried out using two types of imagery. The first are freely available generic touristic photos collected from the web. The second are panoramic images captured in 2010 for documenting those monuments. In the paper we present a 3d reconstruction workflow for both types of imagery using state-of-the art dense image matching software, addressing the non-trivial challenges of combining uncalibrated public domain imagery with panoramic images with very wide base-lines. We subsequently investigate the aspects of accuracy and completeness obtainable from the public domain touristic images alone and from the combination with spherical panoramas. We furthermore discuss the challenges of co-registering the weakly connected 3d point cloud fragments resulting from the limited coverage of the touristic photos. We then describe an approach using spherical photogrammetry as a virtual topographic survey allowing the co-registration of a detailed and accurate single 3d model of the temple interior and exterior.

  15. Detection of 320 Gb/s Nyquist OTDM by polarization-insensitive time-domain optical Fourier transformation

    Hu, Hao; Kong, Deming; Palushani, Evarist;

    2013-01-01

    320 Gb/s Nyquist-OTDM is generated by rectangular filtering with a bandwidth of 320 GHz and received by polarization-insensitive time-domain optical Fourier transformation (TD-OFT) followed by passive filtering. After the time-to-frequency mapping in the TD-OFT, the Nyquist-OTDM is converted into a...

  16. Nonlinear optical frequency conversion of an amplified Fourier Domain Mode Locked (FDML) laser.

    Leonhardt, Rainer; Biedermann, Benjamin R; Wieser, Wolfgang; Huber, Robert

    2009-09-14

    We report on the highly efficient non-linear optical frequency conversion of the wavelength swept output from a Fourier Domain Mode Locked (FDML) laser. Different concepts for power scaling of FDML lasers by post-amplification with active fibers are presented. A two-stage post-amplification of an FDML laser with an amplification factor of 300 up to a peak power of 1.5 W is used to supply sufficient power levels for non-linear conversion. Using a single-mode dispersion shifted fiber (DSF), we convert this amplified output that covers the region between 1541 nm and 1545 nm to a wavelength range from 1572 nm to 1663 nm via modulation instability (MI). For this four wave mixing process we observe an efficiency of approximately 40%. The anti-Stokes signal between 1435 nm and 1516 nm was observed with lower conversion efficiency. In addition to shifting the wavelength, the effect of MI also enables a substantial increase in the wavelength sweep rate of the FDML laser by a factor of approximately 50 to 0.55 nm/ns. PMID:19770897

  17. Quantization-Based Digital Audio Watermarking in Discrete Fourier Transform Domain

    Senbin Yang

    2010-04-01

    Full Text Available To explore the principle and performances of Quantization Index Modulation (QIM watermarking algorithm, the realization schemes of this algorithm in Discrete Fourier Transform (DFT domain are classified into three types according to the differences of quantizer parameters, and then the illustrative diagrams of these schemes are given, so the properties of transparency, robustness and capacity of each scheme are concluded. The scheme with best distortion-robustness trade-off is found on that basis. The more efficient embedding and extracting formulas of this scheme are given, and the performances are researched by theoretical analysis rather than computer simulation. The conclusions show that the transparency is in proportion to the square of quantization step and small DFT coefficient leads to poor transparency. The robustness to Additive White Gaussian Noise (AWGN only relates to the quantization step and the algorithm is susceptible to amplitude scale and resampling attacks. The possible capacity is Fo/2 bits per second, which can satisfy various watermarking applications. To improve the robustness, an adaptive quantization algorithm based on masking properties of the Human Auditory System (HAS is proposed at the end of this paper, and the algorithm is evaluated in the analog channel environment and its robustness is proved by the results.

  18. Use of Fourier-Domain Optical Coherence Tomography to Evaluate Anterior Stromal Opacities in Donor Corneas

    Matthew R. Bald

    2013-01-01

    Full Text Available Purpose. To evaluate Fourier-domain optical coherence tomography (FD-OCT as an adjunct to traditional slit lamp examination of donor corneas with suspected Anterior Stromal Opacities. Methods. Seven corneas suspected of having anterior stromal opacities by slit lamp examination were evaluated with FD-OCT. Each cornea was evaluated to confirm the presence of opacity and, if present, the depth of opacity was measured. Results. The opacity depth ranged from 82 μm to 624 μm. The initial slit lamp impressions of five of the seven corneas were confirmed by OCT. In two corneas, the OCT findings were different from the initial slit lamp impressions. Slit lamp examination of the first cornea gave the impression of anterior stromal scarring, but OCT showed that the opacity was limited to the epithelium. Slit lamp examination of the second cornea suggested opacity limited to the epithelium, but OCT identified significant sub-Bowman's scarring. In all cases, the Eye Bank Technicians reported that the location and depth of corneal opacity were more sharply defined by OCT than by slit lamp. Conclusion. The high resolution of OCT makes it easier to determine the location of corneal opacities compared to slit lamp examinations. This enhanced visualization can improve decisions regarding transplant suitability of donor corneas.

  19. Application of Fourier Domain OCT Imaging Technology to the Anterior Segment of the Human Eye

    Wojtkowski, Maciej; Marcos, Susana; Ortiz, Sergio; Grulkowski, Ireneusz

    The anterior segment is the front part of the human eye, which forms the optical system and hence directly impacts vision. Traumatic or pathological changes in the anterior segment may lead to vision loss and, in some cases, even blindness. Since the eighteenth century, optical instrumentation for measuring and imaging the anterior segment of the human eye has been developing along with modern ophthalmology. The application of OCT to the anterior segment imaging is particularly of interest, since this could potentially provide substantial complementary information regarding the large-scale architecture of the cornea and the crystalline lens, or on small portions of tissue imaged with high spatial resolutions comparable to regular microscopy. Especially an introduction of Fourier domain detection in OCT has opened new frontiers in OCT ophthalmic applications. The resultant substantial speed improvement enables rapid image acquisition, helping to reduce artifacts due to patient motion. Thus, it is currently possible to perform high-speed, in vivo, three-dimensional volumetric imaging over large scales within a reasonable time limit and without reducing system sensitivity. This chapter describes the state-of the art OCT technology dedicated to anterior segment imaging and indicates all important parameters which are required for optimization of the performance of OCT instrument.

  20. Comparison of 3D Maximum intensity projection (MIP reconstruction and 2D T2 Half-Fourier Acquisition Single-Shot Turbo Spin-Echo (HASTE sequence in magnetic resonance cholangiopancreatography

    Fuad Julardžija

    2014-04-01

    Full Text Available Introduction: Magnetic resonance cholangiopancreatography (MRCP is a method that allows noninvasive visualization of pancreatobiliary tree and does not require contrast application. It is a modern method based on heavily T2-weighted imaging (hydrography, which uses bile and pancreatic secretions as a natural contrast medium. Certain weaknesses in quality of demonstration of pancreatobiliary tract can be observed in addition to its good characteristics. Our aim was to compare the 3D Maximum intensity projection (MIP reconstruction and 2D T2 Half-Fourier Acquisition Single-Shot Turbo Spin-Echo (HASTE sequence in magnetic resonance cholangiopancreatography.Methods: During the period of one year 51 patients underwent MRCP on 3T „Trio“ system. Patients of different sex and age structure were included, both outpatient and hospitalized. 3D MIP reconstruction and 2D T2 haste sequence were used according to standard scanning protocols.Results: There were 45.1% (n= 23 male and 54.9% (n=28 female patients, age range from 17 to 81 years. 2D T2 haste sequence was more susceptible to respiratory artifacts presence in 64% patients, compared to 3D MIP reconstruction with standard error (0.09, result significance indication (p=0.129 and confidence interval (0.46 to 0.81. 2D T2 haste sequences is more sensitive and superior for pancreatic duct demonstration compared to 3D MIP reconstruction with standard error (0.07, result significance indication (p=0.01 and confidence interval (0.59 to 0.87Conclusion: In order to make qualitative demonstration and analysis of hepatobiliary and pancreatic system on MR, both 2D T2 haste sequence in transversal plane and 3D MIP reconstruction are required.

  1. A 3D Finite-Difference BiCG Iterative Solver with the Fourier-Jacobi Preconditioner for the Anisotropic EIT/EEG Forward Problem

    Sergei Turovets; Vasily Volkov; Aleksej Zherdetsky; Alena Prakonina; Malony, Allen D.

    2014-01-01

    The Electrical Impedance Tomography (EIT) and electroencephalography (EEG) forward problems in anisotropic inhomogeneous media like the human head belongs to the class of the three-dimensional boundary value problems for elliptic equations with mixed derivatives. We introduce and explore the performance of several new promising numerical techniques, which seem to be more suitable for solving these problems. The proposed numerical schemes combine the fictitious domain approach together with th...

  2. Crystal Structure of the Mycoplasma arthritidis-Derived Mitogen in Apo Form Reveals a 3D Domain-Swapped Dimer

    Liu, L.; Li, Z; Guo, Y; VanVranken, S; Mourad, W; Li, H

    2010-01-01

    Mycoplasma arthritidis-derived mitogen (MAM) is a superantigen that can activate large fractions of T cells bearing particular V{beta} elements of T cell receptor. Here, we report the crystal structure of a MAM mutant K201A in apo form (unliganded) at 2.8-{angstrom} resolutions. We also partially refined the crystal structures of the MAM wild type and another MAM mutant L50A in apo forms at low resolutions. Unexpectedly, the structures of these apo MAM molecules display a three-dimensional domain-swapped dimer. The entire C-terminal domains of these MAM molecules are involved in the domain swapping. Functional analyses demonstrated that the K201A and L50A mutants do not show altered ability to bind to their host receptors and that they stimulate the activation of T cells as efficiently as does the wild type. Structural comparisons indicated that the 'reconstituted' MAM monomer from the domain-swapped dimer displays large differences at the hinge regions from the MAM{sub wt} molecule in the receptor-bound form. Further comparison indicated that MAM has a flexible N-terminal loop, implying that conformational changes could occur upon receptor binding.

  3. Imaging of the three-dimensional alveolar structure and the alveolar mechanics of a ventilated and perfused isolated rabbit lung with Fourier domain optical coherence tomography

    Popp, Alexander; Wendel, Martina; Knels, Lilla; Koch, T.; Koch, Edmund

    2006-01-01

    In this feasibility study, Fourier domain optical coherence tomography (FDOCT) is used for visualizing the 3-D structure of fixated lung parenchyma and to capture real-time cross sectional images of the subpleural alveolar mechanics in a ventilated and perfused isolated rabbit lung. The compact and modular setup of the FDOCT system allows us to image the first 500 µm of subpleural lung parenchyma with a 3-D resolution of 16×16×8 µm (in air). During mechanical ventilation, real-time cross sectional FDOCT images visualize the inflation and deflation of alveoli and alveolar sacks (acini) in successive images of end-inspiratory and end-expiratory phase. The FDOCT imaging shows the relation of local alveolar mechanics to the setting of tidal volume (VT), peak airway pressure, and positive end-expiratory pressure (PEEP). Application of PEEP leads to persistent recruitment of alveoli and acini in the end-expiratory phase, compared to ventilation without PEEP where alveolar collapse and reinflation are observed. The imaging of alveolar mechanics by FDOCT will help to determine the amount of mechanical stress put on the alveolar walls during tidal ventilation, which is a key factor in understanding the development of ventilator induced lung injury (VILI).

  4. A 3D Finite-Difference BiCG Iterative Solver with the Fourier-Jacobi Preconditioner for the Anisotropic EIT/EEG Forward Problem

    Sergei Turovets

    2014-01-01

    Full Text Available The Electrical Impedance Tomography (EIT and electroencephalography (EEG forward problems in anisotropic inhomogeneous media like the human head belongs to the class of the three-dimensional boundary value problems for elliptic equations with mixed derivatives. We introduce and explore the performance of several new promising numerical techniques, which seem to be more suitable for solving these problems. The proposed numerical schemes combine the fictitious domain approach together with the finite-difference method and the optimally preconditioned Conjugate Gradient- (CG- type iterative method for treatment of the discrete model. The numerical scheme includes the standard operations of summation and multiplication of sparse matrices and vector, as well as FFT, making it easy to implement and eligible for the effective parallel implementation. Some typical use cases for the EIT/EEG problems are considered demonstrating high efficiency of the proposed numerical technique.

  5. A 3D finite-difference BiCG iterative solver with the Fourier-Jacobi preconditioner for the anisotropic EIT/EEG forward problem.

    Turovets, Sergei; Volkov, Vasily; Zherdetsky, Aleksej; Prakonina, Alena; Malony, Allen D

    2014-01-01

    The Electrical Impedance Tomography (EIT) and electroencephalography (EEG) forward problems in anisotropic inhomogeneous media like the human head belongs to the class of the three-dimensional boundary value problems for elliptic equations with mixed derivatives. We introduce and explore the performance of several new promising numerical techniques, which seem to be more suitable for solving these problems. The proposed numerical schemes combine the fictitious domain approach together with the finite-difference method and the optimally preconditioned Conjugate Gradient- (CG-) type iterative method for treatment of the discrete model. The numerical scheme includes the standard operations of summation and multiplication of sparse matrices and vector, as well as FFT, making it easy to implement and eligible for the effective parallel implementation. Some typical use cases for the EIT/EEG problems are considered demonstrating high efficiency of the proposed numerical technique. PMID:24527060

  6. Fourier domain optical coherence tomography to assess the iridocorneal angle and correlation study in a large Caucasian population

    Fernández-Vigo, José Ignacio; García-Feijóo, Julián; Martínez-de-la-Casa, José María; García-Bella, Javier; Arriola-Villalobos, Pedro; Fernández-Pérez, Cristina; Fernández-Vigo, José Ángel

    2016-01-01

    Background Recently, novel anatomic parameters that can be measured by optical coherence tomography (OCT), have been identified as a more objective and accurate method of defining the iridocorneal angle. The aim of the present study is to measure the iridocorneal angle by Fourier domain (FD) OCT and to identify correlations between angle measurements and subject factors in a large healthy Caucasian population. Methods A cross sectional study was performed in 989 left eyes of 989 healthy subje...

  7. Light field display and 3D image reconstruction

    Iwane, Toru

    2016-06-01

    Light field optics and its applications become rather popular in these days. With light field optics or light field thesis, real 3D space can be described in 2D plane as 4D data, which we call as light field data. This process can be divided in two procedures. First, real3D scene is optically reduced with imaging lens. Second, this optically reduced 3D image is encoded into light field data. In later procedure we can say that 3D information is encoded onto a plane as 2D data by lens array plate. This transformation is reversible and acquired light field data can be decoded again into 3D image with the arrayed lens plate. "Refocusing" (focusing image on your favorite point after taking a picture), light-field camera's most popular function, is some kind of sectioning process from encoded 3D data (light field data) to 2D image. In this paper at first I show our actual light field camera and our 3D display using acquired and computer-simulated light field data, on which real 3D image is reconstructed. In second I explain our data processing method whose arithmetic operation is performed not in Fourier domain but in real domain. Then our 3D display system is characterized by a few features; reconstructed image is of finer resolutions than density of arrayed lenses and it is not necessary to adjust lens array plate to flat display on which light field data is displayed.

  8. Diagnostic capability of Fourier-Domain optical coherence tomography in early primary open angle glaucoma

    FANG Yuan; PAN Ying-zi; LI Mei; QIAO Rong-hua; CAI Yu

    2010-01-01

    Background Optical coherence tomography (OCT) is a high resolution noncontact imaging modality which can quantitatively detect the optic disc and retinal structure.This study was designed to evaluate the diagnostic capability of parameters of the optic disc, retinal nerve fiber layer thickness, and ganglion cell complex (GCC) using a new technology called Fourier-domain OCT (FD-OCT) for early primary open angle glaucoma (POAG) patients.Methods Two groups of patients, early perimetric damage POAG and normal subjects were included in this observational cross-sectional study.All patients underwent FD-OCT and visual field examination in addition to full ophthalmic examinations.Receiver operating characteristic curves (ROC) were studied for all parameters.The sensitivity and specificity for distinguishing between normal and early glaucomatous eyes, the areas under the receiver operating characteristic curves (AROC) and positive, negative likelihood ratios were evaluated for all the single parameters and selected combined parameters using arbitrary cutoffs.Results Thirty-four eyes of 34 early POAG patients and 42 eyes of 42 normal subjects were analyzed.Cup/disc (C/D)vertical ratio presented the best sensitivity and positive likelihood ratio for selected specificities (95% and 85%) which were 79.4% and 88.2%, 33.4 and 7.4, respectively.Among all single parameters, the C/D vertical ratio demonstrated the highest AROC which was at 0.930.The average thickness of circumpapillary RNFL on 3.45 mm showed the highest AROC among all of the peripapillary RNFL parameters.The sensitivity at selected specificity and AROC of GCC were not as high as C/D vertical ratio and RNFL AT on 3.45 mm.When the C/D vertical ratio, RNFL AT on 3.45 mm, and rim area were combined using a logistical diagnostic model, the AROC was raised to 0.949 but not significantly different from the top single parameter, C/D vertical ratio.Conclusions The key parameters obtained by FD-OCT were able to show the

  9. MEMS-based handheld fourier domain Doppler optical coherence tomography for intraoperative microvascular anastomosis imaging.

    Yong Huang

    Full Text Available To demonstrate the feasibility of a miniature handheld optical coherence tomography (OCT imager for real time intraoperative vascular patency evaluation in the setting of super-microsurgical vessel anastomosis.A novel handheld imager Fourier domain Doppler optical coherence tomography based on a 1.3-µm central wavelength swept source for extravascular imaging was developed. The imager was minimized through the adoption of a 2.4-mm diameter microelectromechanical systems (MEMS scanning mirror, additionally a 12.7-mm diameter lens system was designed and combined with the MEMS mirror to achieve a small form factor that optimize functionality as a handheld extravascular OCT imager. To evaluate in-vivo applicability, super-microsurgical vessel anastomosis was performed in a mouse femoral vessel cut and repair model employing conventional interrupted suture technique as well as a novel non-suture cuff technique. Vascular anastomosis patency after clinically successful repair was evaluated using the novel handheld OCT imager.With an adjustable lateral image field of view up to 1.5 mm by 1.5 mm, high-resolution simultaneous structural and flow imaging of the blood vessels were successfully acquired for BALB/C mouse after orthotopic hind limb transplantation using a non-suture cuff technique and BALB/C mouse after femoral artery anastomosis using a suture technique. We experimentally quantify the axial and lateral resolution of the OCT to be 12.6 µm in air and 17.5 µm respectively. The OCT has a sensitivity of 84 dB and sensitivity roll-off of 5.7 dB/mm over an imaging range of 5 mm. Imaging with a frame rate of 36 Hz for an image size of 1000(lateral×512(axial pixels using a 50,000 A-lines per second swept source was achieved. Quantitative vessel lumen patency, lumen narrowing and thrombosis analysis were performed based on acquired structure and Doppler images.A miniature handheld OCT imager that can be used for intraoperative evaluation of

  10. Application of multi-thread computing and domain decomposition to the 3-D neutronics Fem code Cronos

    The purpose of this paper is to present the parallelization of the flux solver and the isotopic depletion module of the code, either using Message Passing Interface (MPI) or OpenMP. Thread parallelism using OpenMP was used to parallelize the mixed dual FEM (finite element method) flux solver MINOS. Investigations regarding the opportunity of mixing parallelism paradigms will be discussed. The isotopic depletion module was parallelized using domain decomposition and MPI. An attempt at using OpenMP was unsuccessful and will be explained. This paper is organized as follows: the first section recalls the different types of parallelism. The mixed dual flux solver and its parallelization are then presented. In the third section, we describe the isotopic depletion solver and its parallelization; and finally conclude with some future perspectives. Parallel applications are mandatory for fine mesh 3-dimensional transport and simplified transport multigroup calculations. The MINOS solver of the FEM neutronics code CRONOS2 was parallelized using the directive based standard OpenMP. An efficiency of 80% (resp. 60%) was achieved with 2 (resp. 4) threads. Parallelization of the isotopic depletion solver was obtained using domain decomposition principles and MPI. Efficiencies greater than 90% were reached. These parallel implementations were tested on a shared memory symmetric multiprocessor (SMP) cluster machine. The OpenMP implementation in the solver MINOS is only the first step towards fully using the SMPs cluster potential with a mixed mode parallelism. Mixed mode parallelism can be achieved by combining message passing interface between clusters with OpenMP implicit parallelism within a cluster

  11. 3D Lithospheric Imaging by Time-Domain Full-Waveform Inversion of Teleseismic Body-Waves

    Beller, S.; Monteiller, V.; Operto, S.; Nolet, G.; Combe, L.; Metivier, L.; Virieux, J.; Nissen-Meyer, T.; Paul, A.

    2014-12-01

    With the deployment of dense seismic arrays and the continuous growth of computing facilities, full-waveform inversion (FWI) of teleseismic data has become a method of choice for high-resolution lithospheric imaging. FWI can be recast as a local optimization problem that seeks to estimate Earth's elastic properties by iteratively minimizing the misfit function between observed and modeled seismograms.In passive teleseismic configurations, the seismic source no longer corresponds to a point source embedded in the targeted medium but rather corresponds to a wavefront incoming from the outside of the model. We develop a 3-dimensional time-domain full-waveform inversion program that is more designed for this configuration. The gradient of the misfit function is efficiently computed with the adjoint-state method. A velocity-stress finite-difference time-domain modeling engine, which is interfaced with the so-called total-field/scattered-field method, is used to propagate in the targeted medium the incident wavefield inferred from a global Earth simulation (AxiSEM). Such interfacing is required to account for the multiple arrivals in the incoming wavefield and the sphericity of the Earth. Despite the limited number of nearly plane-wave sources, the interaction of the incident wavefield with the topography (P-Sv conversions and P-P reflections acting as secondary sources) provides a suitable framework to record both transmitted wavefields and reflected wavefields from lithospheric reflectors. These recordings of both transmitted and reflected waves makes FWI amenable to a broadband-wavenumber (i.e., high resolution) reconstruction of the lithosphere.Feasibility of the method is assessed with a realistic synthetic model representative of the Western Alps. One key issue is the estimation of the temporal source excitation, as there might be some trade-off between the source estimation and the subsurface update. To avoid being trapped in a local minimum, we follow a

  12. Insights into Protein Sequence and Structure-Derived Features Mediating 3D Domain Swapping Mechanism using Support Vector Machine Based Approach

    Khader Shameer

    2010-06-01

    Full Text Available 3-dimensional domain swapping is a mechanism where two or more protein molecules form higher order oligomers by exchanging identical or similar subunits. Recently, this phenomenon has received much attention in the context of prions and neuro-degenerative diseases, due to its role in the functional regulation, formation of higher oligomers, protein misfolding, aggregation etc. While 3-dimensional domain swap mechanism can be detected from three-dimensional structures, it remains a formidable challenge to derive common sequence or structural patterns from proteins involved in swapping. We have developed a SVM-based classifier to predict domain swapping events using a set of features derived from sequence and structural data. The SVM classifier was trained on features derived from 150 proteins reported to be involved in 3D domain swapping and 150 proteins not known to be involved in swapped conformation or related to proteins involved in swapping phenomenon. The testing was performed using 63 proteins from the positive dataset and 63 proteins from the negative dataset. We obtained 76.33% accuracy from training and 73.81% accuracy from testing. Due to high diversity in the sequence, structure and functions of proteins involved in domain swapping, availability of such an algorithm to predict swapping events from sequence and structure-derived features will be an initial step towards identification of more putative proteins that may be involved in swapping or proteins involved in deposition disease. Further, the top features emerging in our feature selection method may be analysed further to understand their roles in the mechanism of domain swapping.

  13. Development of an polarization sensitive Fourier domain optical coherence tomography and it utilization on the Mueller matrix determination

    This study approached theoretical and experimental aspects related with the development of a polarization sensitive, Fourier domain, optical coherence tomography system (PS-FD-OCT) and its utilization on the Mueller Matrix determination. This work began with a bibliographic revision, which describes since the early studies to the actual state of the art of the technique. The mathematical formalism of Fourier domain low coherence interferometry and light polarization was performed as well. Studies based on numerical simulations, of three different algorithm types, responsible to recover the scattering profile, were done. The implemented algorithms were: Direct Fourier Transform, Interpolation and zero-filling. By the end of the simulation study, was possible to conclude that the algorithm zero-filling 2N presented better characteristics when compared with the others. In the experimental part, firstly different OCT setups were assembled and measurements were done in order to verify aspects related with the theory. Then, using a polymeric sample, birefringence images were performed, which allowed determining the sample birefringence quantitatively. Finally, images taken of different polarization states were collected, and through then images related with the Mueller Matrix elements were calculated, which were analyzed individually. (author)

  14. Extending a serial 3D two-phase CFD code to parallel execution over MPI by using the PETSc library for domain decomposition

    Ervik, Åsmund; Müller, Bernhard

    2014-01-01

    To leverage the last two decades' transition in High-Performance Computing (HPC) towards clusters of compute nodes bound together with fast interconnects, a modern scalable CFD code must be able to efficiently distribute work amongst several nodes using the Message Passing Interface (MPI). MPI can enable very large simulations running on very large clusters, but it is necessary that the bulk of the CFD code be written with MPI in mind, an obstacle to parallelizing an existing serial code. In this work we present the results of extending an existing two-phase 3D Navier-Stokes solver, which was completely serial, to a parallel execution model using MPI. The 3D Navier-Stokes equations for two immiscible incompressible fluids are solved by the continuum surface force method, while the location of the interface is determined by the level-set method. We employ the Portable Extensible Toolkit for Scientific Computing (PETSc) for domain decomposition (DD) in a framework where only a fraction of the code needs to be a...

  15. Efficient training of convolutional deep belief networks in the frequency domain for application to high-resolution 2D and 3D images.

    Brosch, Tom; Tam, Roger

    2015-01-01

    Deep learning has traditionally been computationally expensive, and advances in training methods have been the prerequisite for improving its efficiency in order to expand its application to a variety of image classification problems. In this letter, we address the problem of efficient training of convolutional deep belief networks by learning the weights in the frequency domain, which eliminates the time-consuming calculation of convolutions. An essential consideration in the design of the algorithm is to minimize the number of transformations to and from frequency space. We have evaluated the running time improvements using two standard benchmark data sets, showing a speed-up of up to 8 times on 2D images and up to 200 times on 3D volumes. Our training algorithm makes training of convolutional deep belief networks on 3D medical images with a resolution of up to 128×128×128 voxels practical, which opens new directions for using deep learning for medical image analysis. PMID:25380341

  16. A Polymer Model with Epigenetic Recolouring Reveals a Pathway for the de novo Establishment and 3D Organisation of Chromatin Domains

    Michieletto, Davide; Marenduzzo, Davide

    2016-01-01

    One of the most important problems in development is how epigenetic domains can be first established, and then maintained, within cells. To address this question, we propose a framework which couples 3D chromatin folding dynamics, to a "recolouring" process modelling the writing of epigenetic marks. Because many intra-chromatin interactions are mediated by bridging proteins, we consider a "two-state" model with self-attractive interactions between two epigenetic marks which are alike (either active or inactive). This model displays a first-order-like transition between a swollen, epigenetically disordered, phase, and a compact, epigenetically coherent, chromatin globule. If the self-attraction strength exceeds a threshold, the chromatin dynamics becomes glassy, and the corresponding interaction network freezes. By modifying the epigenetic read-write process according to more biologically-inspired assumptions, our polymer model with recolouring recapitulates the ultrasensitive response of epigenetic switches t...

  17. Limited cross-reactivity among domains of the Plasmodium falciparum clone 3D7 erythrocyte membrane protein 1 family

    Joergensen, Louise; Turner, Louise; Magistrado, Pamela;

    2006-01-01

    The var gene-encoded Plasmodium falciparum erythrocyte membrane protein 1 (PfEMP1) family is responsible for antigenic variation and sequestration of infected erythrocytes during malaria. We have previously grouped the 60 PfEMP1 variants of P. falciparum clone 3D7 into groups A and B/A (category A......) and groups B, B/C, and C (category non-A). Expression of category A molecules is associated with severe malaria, and that of category non-A molecules is associated with uncomplicated malaria and asymptomatic infection. Here we assessed cross-reactivity among 60 different recombinant PfEMP1 domains...... sharing cross-reactive antibody epitopes. Identification of groups of serological cross-reacting molecules is pivotal for the development of vaccines based on PfEMP1....

  18. In vivo sweat film layer thickness measured with Fourier-domain optical coherence tomography (FD-OCT)

    Jonathan, Enock

    2008-06-01

    While human sweat secretion is accepted as a mechanism by which the body cools off, excessive sweating (hyperhidrosis) is now appreciated as a medical condition and the primary site for diagnosis is the palm of the hand. We propose sweat film layer thickness as a potential clinical diagnostic parameter when screening for excessive sweating. In this preliminary study we demonstrate the usefulness of Fourier-domain optical coherence tomography (FD-OCT) for measurement of sweat film thickness in vivo with micron-scale resolution on the hand of a human volunteer. FD-OCT has a superior image acquisition time and identification of active sweat glands, ducts and pores is also possible.

  19. High-speed polarization sensitive optical coherence tomography scan engine based on Fourier domain mode locked laser

    Bonesi, Marco; Sattmann, Harald; Torzicky, Teresa; Zotter, Stefan; Baumann, Bernhard; Pircher, Michael; Götzinger, Erich; Eigenwillig, Christoph; Wieser, Wolfgang; Huber, Robert; Hitzenberger, Christoph K.

    2012-01-01

    We report on a new swept source polarization sensitive optical coherence tomography scan engine that is based on polarization maintaining (PM) fiber technology. The light source is a Fourier domain mode locked laser with a PM cavity that operates in the 1300 nm wavelength regime. It is equipped with a PM buffer stage that doubles the fundamental sweep frequency of 54.5 kHz. The fiberization allows coupling of the scan engine to different delivery probes. In a first demonstration, we use the s...

  20. High-speed polarization-sensitive OCT at 1060 nm using a Fourier domain mode-locked swept source

    Marschall, Sebastian; Torzicky, Teresa; Klein, Thomas;

    2012-01-01

    Optical coherence tomography (OCT) in the 1060nm range is interesting for in vivo imaging of the human posterior eye segment (retina, choroid, sclera), as it permits a long penetration depth. Complementary to structural images, polarization-sensitive OCT (PS-OCT) images visualize birefringent...... sufficiently large datasets. Here, we demonstrate PS-OCT imaging at 350 kHz A-scan rate using a two-channel PS-OCT system in conjunction with a Fourier domain mode-locked laser. The light source spectrum spans up to 100nm around the water absorption minimum at 1060 nm. By modulating the laser pump current, we...

  1. Feasibility and Diagnostic Accuracy of Whole Heart Coronary MR Angiography Using Free-Breathing 3D Balanced Turbo-Field-Echo with SENSE and the Half-Fourier Acquisition Technique

    We wanted to assess the feasibility and diagnostic accuracy of whole heart coronary magnetic resonance angiography (MRA) with using 3D balanced turbo-field-echo (b-TFE) with SENSE and the half-Fourier acquisition technique for identifying stenoses of the coronary artery. Twenty-one patients who underwent both whole heart coronary MRA examinations and conventional catheter coronary angiography examinations were enrolled in the study. The whole heart coronary MRA images were acquired using a navigator gated 3D b-TFE sequence with SENSE and the half-Fourier acquisition technique to reduce the acquisition time. The imaging slab covered the whole heart (80 contiguous slices with a reconstructed slice thickness of 1.5 mm) along the transverse axis. The quality of the images was evaluated by using a 5-point scale (0 - uninterpretable, 1 - poor, 2 - fair, 3 - good, 4 - excellent). Ten coronary segments of the heart were evaluated in each case; the left main coronary artery (LM), and the proximal, middle and distal segments of the left anterior descending (LAD), the left circumflex (LCX) and the right coronary artery (RCA). The diagnostic accuracy of whole heart coronary MRA for detecting significant coronary artery stenosis was determined on the segment-bysegment basis, and it was compared with the results obtained by conventional catheter angiography, which is the gold standard. The mean image quality was 3.7 in the LM, 3.2 in the LAD, 2.5 in the LCX, and 3.3 in the RCA, respectively (the overall image quality was 3.0 ± 0.1). 168 (84%) of the 201 segments had an acceptable image quality (≥ grade 2). The sensitivity, specificity, accuracy, negative predictive value and positive predictive value of the whole heart coronary MRA images for detecting significant stenosis were 81.3%, 92.1%, 91.1%, 97.9%, and 52.0%, respectively. The mean coronary MRA acquisition time was 9 min 22 sec (± 125 sec). Whole heart coronary MRA is a feasible technique, and it has good potential to

  2. Smooth 2-D ocean sound speed from Laplace and Laplace-Fourier domain inversion of seismic oceanography data

    Blacic, Tanya M.; Jun, Hyunggu; Rosado, Hayley; Shin, Changsoo

    2016-02-01

    In seismic oceanography, processed images highlight small temperature changes, but inversion is needed to obtain absolute temperatures. Local search-based full waveform inversion has a lower computational cost than global search but requires accurate starting models. Unfortunately, most marine seismic data have little associated hydrographic data and the band-limited nature of seismic data makes extracting the long wavelength sound speed trend directly from seismic data inherently challenging. Laplace and Laplace-Fourier domain inversion (LDI) can use rudimentary starting models without prior information about the medium. Data are transformed to the Laplace domain, and a smooth sound speed model is extracted by examining the zero and low frequency components of the damped wavefield. We applied LDI to five synthetic data sets based on oceanographic features and recovered smoothed versions of our synthetic models, showing the viability of LDI for creating starting models suitable for more detailed inversions.

  3. A 3D, fully Eulerian, VOF-based solver to study the interaction between two fluids and moving rigid bodies using the fictitious domain method

    Pathak, Ashish; Raessi, Mehdi

    2016-04-01

    We present a three-dimensional (3D) and fully Eulerian approach to capturing the interaction between two fluids and moving rigid structures by using the fictitious domain and volume-of-fluid (VOF) methods. The solid bodies can have arbitrarily complex geometry and can pierce the fluid-fluid interface, forming contact lines. The three-phase interfaces are resolved and reconstructed by using a VOF-based methodology. Then, a consistent scheme is employed for transporting mass and momentum, allowing for simulations of three-phase flows of large density ratios. The Eulerian approach significantly simplifies numerical resolution of the kinematics of rigid bodies of complex geometry and with six degrees of freedom. The fluid-structure interaction (FSI) is computed using the fictitious domain method. The methodology was developed in a message passing interface (MPI) parallel framework accelerated with graphics processing units (GPUs). The computationally intensive solution of the pressure Poisson equation is ported to GPUs, while the remaining calculations are performed on CPUs. The performance and accuracy of the methodology are assessed using an array of test cases, focusing individually on the flow solver and the FSI in surface-piercing configurations. Finally, an application of the proposed methodology in simulations of the ocean wave energy converters is presented.

  4. Efficient fully 3D list-mode TOF PET image reconstruction using a factorized system matrix with an image domain resolution model

    A factorized system matrix utilizing an image domain resolution model is attractive in fully 3D time-of-flight PET image reconstruction using list-mode data. In this paper, we study a factored model based on sparse matrix factorization that is comprised primarily of a simplified geometrical projection matrix and an image blurring matrix. Beside the commonly-used Siddon’s ray-tracer, we propose another more simplified geometrical projector based on the Bresenham’s ray-tracer which further reduces the computational cost. We discuss in general how to obtain an image blurring matrix associated with a geometrical projector, and provide theoretical analysis that can be used to inspect the efficiency in model factorization. In simulation studies, we investigate the performance of the proposed sparse factorization model in terms of spatial resolution, noise properties and computational cost. The quantitative results reveal that the factorization model can be as efficient as a non-factored model, while its computational cost can be much lower. In addition we conduct Monte Carlo simulations to identify the conditions under which the image resolution model can become more efficient in terms of image contrast recovery. We verify our observations using the provided theoretical analysis. The result offers a general guide to achieve the optimal reconstruction performance based on a sparse factorization model with an image domain resolution model. (paper)

  5. Assignments and structure determination of the catalytic domain of human fibroblast collagenase using 3D double and triple resonance NMR spectroscopy

    We report here the backbone 1HN, 15N, 13Cα, 13CO, and 1Hα NMR assignments for the catalytic domain of human fibroblast collagenase (HFC). Three independent assignment pathways (matching 1H, 13Cα, and 13CO resonances) were used to establish sequential connections. The connections using 13Cα resonances were obtained from HNCOCA and HNCA experiments; 13CO connections were obtained from HNCO and HNCACO experiments. The sequential proton assignment pathway was established from a 3D(1H/15N) NOESY-HSQC experiment. Amino acid typing was accomplished using 13C and 15N chemical shifts, specific labeling of 15N-Leu, and spin pattern recognition from DQF-COSY. The secondary structure was determined by analyzing the 3D (1H/15N) NOESY-HSQC. A preliminary NMR structure calculation of HFC was found to be in agreement with recent X-ray structures of human fibroblast collagenase and human neutrophil collagenase as well as similar to recent NMR structures of a highly homologous protein, stromelysin. All three helices were located; a five-stranded β-sheet (four parallel strands, one antiparallel strand) was also determined. β-Sheet regions were identified by cross-strand dαN and dNN connections and by strong intraresidue dαN correlations, and were corroborated by observing slow amide proton exchange. Chemical shift changes in a selectively 15N-labeled sample suggest that substantial structural changes occur in the active site cleft on the binding of an inhibitor

  6. Docking and 3D-QSAR (quantitative structure activity relationship) studies of flavones, the potent inhibitors of p-glycoprotein targeting the nucleotide binding domain.

    Kothandan, Gugan; Gadhe, Changdev G; Madhavan, Thirumurthy; Choi, Cheol Hee; Cho, Seung Joo

    2011-09-01

    In order to explore the interactions between flavones and P-gp, in silico methodologies such as docking and 3D-QSAR were performed. CoMFA and CoMSIA analyses were done using ligand based and receptor guided alignment schemes. Validation statistics include leave-one-out cross-validated R(2) (q(2)), internal prediction parameter by progressive scrambling (Q(*2)), external prediction with test set. They show that models derived from this study are quite robust. Ligand based CoMFA (q(2) = 0.747, Q(*2) = 0.639, r(pred)(2)=0.802) and CoMSIA model (q(2) = 0.810, Q(*2) = 0.676, r(pred)(2)=0.785) were developed using atom by atom matching. Receptor guided CoMFA (q(2) = 0.712, Q(*2) = 0.497, r(pred)(2) = 0.841) and for CoMSIA (q(2) = 0.805, Q(*2) = 0.589, r(pred)(2) = 0.937) models were developed by docking of highly active flavone into the proposed NBD (nucleotide binding domain) of P-gp. The 3D-QSAR models generated here predicted that hydrophobic and steric parameters are important for activity toward P-gp. Our studies indicate the important amino acid in NBD crucial for binding in accordance with the previous results. This site forms a hydrophobic site. Since flavonoids have potential without toxicity, we propose to inspect this hydrophobic site including Asn1043 and Asp1049 should be considered for future inhibitor design. PMID:21723648

  7. GRID2D/3D: A computer program for generating grid systems in complex-shaped two- and three-dimensional spatial domains. Part 2: User's manual and program listing

    Bailey, R. T.; Shih, T. I.-P.; Nguyen, H. L.; Roelke, R. J.

    1990-01-01

    An efficient computer program, called GRID2D/3D, was developed to generate single and composite grid systems within geometrically complex two- and three-dimensional (2- and 3-D) spatial domains that can deform with time. GRID2D/3D generates single grid systems by using algebraic grid generation methods based on transfinite interpolation in which the distribution of grid points within the spatial domain is controlled by stretching functions. All single grid systems generated by GRID2D/3D can have grid lines that are continuous and differentiable everywhere up to the second-order. Also, grid lines can intersect boundaries of the spatial domain orthogonally. GRID2D/3D generates composite grid systems by patching together two or more single grid systems. The patching can be discontinuous or continuous. For continuous composite grid systems, the grid lines are continuous and differentiable everywhere up to the second-order except at interfaces where different single grid systems meet. At interfaces where different single grid systems meet, the grid lines are only differentiable up to the first-order. For 2-D spatial domains, the boundary curves are described by using either cubic or tension spline interpolation. For 3-D spatial domains, the boundary surfaces are described by using either linear Coon's interpolation, bi-hyperbolic spline interpolation, or a new technique referred to as 3-D bi-directional Hermite interpolation. Since grid systems generated by algebraic methods can have grid lines that overlap one another, GRID2D/3D contains a graphics package for evaluating the grid systems generated. With the graphics package, the user can generate grid systems in an interactive manner with the grid generation part of GRID2D/3D. GRID2D/3D is written in FORTRAN 77 and can be run on any IBM PC, XT, or AT compatible computer. In order to use GRID2D/3D on workstations or mainframe computers, some minor modifications must be made in the graphics part of the program; no

  8. Modular 3-D Transport model

    MT3D was first developed by Chunmiao Zheng in 1990 at S.S. Papadopulos & Associates, Inc. with partial support from the U.S. Environmental Protection Agency (USEPA). Starting in 1990, MT3D was released as a pubic domain code from the USEPA. Commercial versions with enhanced capab...

  9. Fourier-Domain Analysis of Hydriding Kinetics Using Pneumato-Chemical Impedance Spectroscopy

    Millet, P.; C. Decaux; R. Ngameni; Guymont, M.

    2007-01-01

    Analysis of phase transformation processes observed in hydrogen absorbing materials (pure metals, alloys, or compounds) is still a matter of active research. Using pneumato-chemical impedance spectroscopy (PIS), it is now possible to analyze the mechanism of hydriding reactions induced by the gas phase. Experimental impedance diagrams, measured on activated LaNi5 in single- and two-phase domains, are reported in this paper. It is shown that their shape is mostly affected by the slope of the i...

  10. Immersed boundary smooth extension: A high-order method for solving PDE on arbitrary smooth domains using Fourier spectral methods

    Stein, David B.; Guy, Robert D.; Thomases, Becca

    2016-01-01

    The Immersed Boundary method is a simple, efficient, and robust numerical scheme for solving PDE in general domains, yet it only achieves first-order spatial accuracy near embedded boundaries. In this paper, we introduce a new high-order numerical method which we call the Immersed Boundary Smooth Extension (IBSE) method. The IBSE method achieves high-order accuracy by smoothly extending the unknown solution of the PDE from a given smooth domain to a larger computational domain, enabling the use of simple Cartesian-grid discretizations (e.g. Fourier spectral methods). The method preserves much of the flexibility and robustness of the original IB method. In particular, it requires minimal geometric information to describe the boundary and relies only on convolution with regularized delta-functions to communicate information between the computational grid and the boundary. We present a fast algorithm for solving elliptic equations, which forms the basis for simple, high-order implicit-time methods for parabolic PDE and implicit-explicit methods for related nonlinear PDE. We apply the IBSE method to solve the Poisson, heat, Burgers', and Fitzhugh-Nagumo equations, and demonstrate fourth-order pointwise convergence for Dirichlet problems and third-order pointwise convergence for Neumann problems.

  11. A structural basis for Staphylococcal complement subversion: X-ray structure of the complement-binding domain of Staphylococcus aureus protein Sbi in complex with ligand C3d

    Clark, E. A.; Crennell, S.; Upadhyay, A.; Zozulya, A. V.; Mackay, J. D.; Svergun, D.I.; Bagby, S; van den Elsen, J. M.

    2011-01-01

    The structure of the complement-binding domain of Staphylococcus aureus protein Sbi (Sbi-IV) in complex with ligand C3d is presented. The 1.7 Å resolution structure reveals the molecular details of the recognition of thioester-containing fragment C3d of the central complement component C3, involving interactions between residues of Sbi-IV helix α2 and the acidic concave surface of C3d. The complex provides a structural basis for the binding preference of Sbi for native C3 over C3b and explain...

  12. Raman-pumped Fourier-domain mode-locked laser: analysis of operation and application for optical coherence tomography.

    Klein, Thomas; Wieser, Wolfgang; Biedermann, Benjamin R; Eigenwillig, Christoph M; Palte, Gesa; Huber, Robert

    2008-12-01

    We demonstrate a Raman-pumped Fourier-domain mode-locked (FDML) fiber laser and optical coherence tomography imaging with this source. The wavelength sweep range of only 30 nm centered around 1550 nm results in limited axial resolution, hence a nonbiological sample is imaged. An output power of 1.9 mW was achieved at a sweep rate of 66 kHz and a maximum ranging depth of ~2.5 cm. Roll-off characteristics are found to be similar to FDML lasers with semiconductor optical amplifiers as gain media. The application of Raman gain also enables unperturbed cavity ring-down experiments in FDML lasers for the first time, providing direct access to the photon lifetime in the laser cavity. Good agreement with nonswept cw operation is proof of the stationary operation of FDML lasers. PMID:19037436

  13. Optical module to extend any Fourier-domain optical coherence tomography system into a polarisation-sensitive system

    Rivet, Sylvain; Marques, Manuel J.; Bradu, Adrian; Podoleanu, Adrian

    2016-06-01

    This article presents a theoretical study on an optical module (OM) that can be inserted between an object under investigation and a Fourier-domain optical coherence tomography system, transforming the latter into a polarisation-sensitive optical coherence tomography optical coherence tomography (OCT) system. The module consists of two electro-optic modulators, a Faraday rotator, a linear polariser and a quarter-wave plate. A detailed description on how the module can be used to extract both the net retardance and the fast axis orientation of a linear birefringent sample is presented. This is achieved by taking two sequential measurements for different values of retardance produced by the electro-optic modulator. The module keeps measurements free from undesired polarimetric effects due to birefringence in the single-mode optical fibre and diattenuation in fibre-based couplers within OCT systems. Simulations have been carried out in order to evaluate the effects of chromatic behaviour of the components within the OM.

  14. The properties of SIRT, TVM, and DART for 3D imaging of tubular domains in nanocomposite thin-films and sections

    In electron tomography, the fidelity of the 3D reconstruction strongly depends on the employed reconstruction algorithm. In this paper, the properties of SIRT, TVM and DART reconstructions are studied with respect to having only a limited number of electrons available for imaging and applying different angular sampling schemes. A well-defined realistic model is generated, which consists of tubular domains within a matrix having slab-geometry. Subsequently, the electron tomography workflow is simulated from calculated tilt-series over experimental effects to reconstruction. In comparison with the model, the fidelity of each reconstruction method is evaluated qualitatively and quantitatively based on global and local edge profiles and resolvable distance between particles. Results show that the performance of all reconstruction methods declines with the total electron dose. Overall, SIRT algorithm is the most stable method and insensitive to changes in angular sampling. TVM algorithm yields significantly sharper edges in the reconstruction, but the edge positions are strongly influenced by the tilt scheme and the tubular objects become thinned. The DART algorithm markedly suppresses the elongation artifacts along the beam direction and moreover segments the reconstruction which can be considered a significant advantage for quantification. Finally, no advantage of TVM and DART to deal better with fewer projections was observed. - Highlights: • Dose and tilt-scheme dependence of SIRT, TVM and DART tomograms are quantified. • SIRT is the most stable method and insensitive to changes in angular sampling. • TVM significantly reduces noise but objects become thinned. • DART markedly suppresses the elongation artifacts. • No advantage of TVM and DART for fewer projections is observed

  15. The properties of SIRT, TVM, and DART for 3D imaging of tubular domains in nanocomposite thin-films and sections

    Chen, Delei [Laboratory of Materials and Interface Chemistry, Department of Chemical Engineering and Chemistry, Eindhoven University of Technology, Den Dolech 2, 5612 AZ Eindhoven (Netherlands); Dutch Polymer Institute (DPI), P.O. Box 902, 5600 AX Eindhoven (Netherlands); Goris, Bart [EMAT, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp (Belgium); Bleichrodt, Folkert [Centrum Wiskunde and Informatica, Science Park 123, NL-1098XG Amsterdam (Netherlands); Mezerji, Hamed Heidari; Bals, Sara [EMAT, University of Antwerp, Groenenborgerlaan 171, B-2020 Antwerp (Belgium); Batenburg, Kees Joost [Centrum Wiskunde and Informatica, Science Park 123, NL-1098XG Amsterdam (Netherlands); With, Gijsbertus de [Laboratory of Materials and Interface Chemistry, Department of Chemical Engineering and Chemistry, Eindhoven University of Technology, Den Dolech 2, 5612 AZ Eindhoven (Netherlands); Friedrich, Heiner, E-mail: h.friedrich@tue.nl [Laboratory of Materials and Interface Chemistry, Department of Chemical Engineering and Chemistry, Eindhoven University of Technology, Den Dolech 2, 5612 AZ Eindhoven (Netherlands)

    2014-12-15

    In electron tomography, the fidelity of the 3D reconstruction strongly depends on the employed reconstruction algorithm. In this paper, the properties of SIRT, TVM and DART reconstructions are studied with respect to having only a limited number of electrons available for imaging and applying different angular sampling schemes. A well-defined realistic model is generated, which consists of tubular domains within a matrix having slab-geometry. Subsequently, the electron tomography workflow is simulated from calculated tilt-series over experimental effects to reconstruction. In comparison with the model, the fidelity of each reconstruction method is evaluated qualitatively and quantitatively based on global and local edge profiles and resolvable distance between particles. Results show that the performance of all reconstruction methods declines with the total electron dose. Overall, SIRT algorithm is the most stable method and insensitive to changes in angular sampling. TVM algorithm yields significantly sharper edges in the reconstruction, but the edge positions are strongly influenced by the tilt scheme and the tubular objects become thinned. The DART algorithm markedly suppresses the elongation artifacts along the beam direction and moreover segments the reconstruction which can be considered a significant advantage for quantification. Finally, no advantage of TVM and DART to deal better with fewer projections was observed. - Highlights: • Dose and tilt-scheme dependence of SIRT, TVM and DART tomograms are quantified. • SIRT is the most stable method and insensitive to changes in angular sampling. • TVM significantly reduces noise but objects become thinned. • DART markedly suppresses the elongation artifacts. • No advantage of TVM and DART for fewer projections is observed.

  16. High Performance GPU-Based Fourier Volume Rendering

    Marwan Abdellah; Ayman Eldeib; Amr Sharawi

    2015-01-01

    Fourier volume rendering (FVR) is a significant visualization technique that has been used widely in digital radiography. As a result of its (N 2log⁡N) time complexity, it provides a faster alternative to spatial domain volume rendering algorithms that are (N 3) computationally complex. Relying on the Fourier projection-slice theorem, this technique operates on the spectral representation of a 3D volume instead of processing its spatial representation to generate attenuation-only projection...

  17. Interstudy reproducibility of the second generation, Fourier domain optical coherence tomography in patients with coronary artery disease and comparison with intravascular ultrasound: A study applying automated contour detection

    Z. Jamil (Z.); G.J. Tearney (Guillermo); N. Bruining (Nico); K. Sihan (Kenji); G. van Soest (Gijs); J.M.R. Ligthart (Jürgen); R.T. van Domburg (Ron); B.E. Bouma (Brett); E.S. Regar (Eveline)

    2013-01-01

    textabstractRecently, Fourier domain OCT (FD-OCT) has been introduced for clinical use. This approach allows in vivo, high resolution (15 micron) imaging with very fast data acquisition, however, it requires brief flushing of the lumen during imaging. The reproducibility of such fast data acquisitio

  18. On compactness of the velocity field in the incompressible limit of the full Navier-Stokes-Fourier system on large domains

    Feireisl, Eduard; Poul, Lukáš

    2009-01-01

    Roč. 32, č. 10 (2009), s. 1269-1286. ISSN 0170-4214 R&D Projects: GA AV ČR(CZ) IAA100190606 Institutional research plan: CEZ:AV0Z10190503 Keywords : low Mach number limit * Navier - Stokes -Fourier system * large domain Subject RIV: BA - General Mathematics Impact factor: 0.808, year: 2009

  19. Ultra-high-speed optical serial-to-parallel data conversion by time-domain optical Fourier transformation in a silicon nanowire

    Mulvad, Hans Christian Hansen; Palushani, Evarist; Hu, Hao;

    2011-01-01

    We demonstrate conversion from 64 × 10 Gbit/s optical timedivision multiplexed (OTDM) data to dense wavelength division multiplexed (DWDM) data with 25 GHz spacing. The conversion is achieved by time-domain optical Fourier transformation (OFT) based on four-wave mixing (FWM) in a 3.6 mm long sili...

  20. Quantifying height of ultraprecisely machined steps on oxygen-free electronic copper disc using Fourier-domain short coherence interferometry

    Montonen, Risto; Kassamakov, Ivan; Hæggström, Edward; Österberg, Kenneth

    2016-01-01

    The internal shape and alignment of accelerator discs is crucial for efficient collider operation at the future compact linear collider (CLIC). We applied a calibrated custom-made Fourier-domain short coherence interferometer to measure the height of 40 and 60 μm ultraprecisely turned steps (surface roughness Ra≤25 nm, flatness ≤2 μm) on an oxygen-free electronic copper disc. The step heights were quantified to be (39.6±2.6) μm and (59.0±2.3) μm. The uncertainties are quoted at 95% confidence level and include contributions from calibration, refractive index of air, cosine error, surface roughness, and thermal expansion in comparison to standard temperature of 20°C. The results were verified by measuring the same steps using a commercial white light interferometer Veeco-NT3300. Our instrument can ensure that the accelerator discs of the CLIC are aligned within the tolerance required for efficient collider operation.

  1. Common approach for compensation of axial motion artifacts in swept-source OCT and dispersion in Fourier-domain OCT.

    Hillmann, Dierck; Bonin, Tim; Lührs, Christian; Franke, Gesa; Hagen-Eggert, Martin; Koch, Peter; Hüttmann, Gereon

    2012-03-12

    Swept-source optical coherence tomography (SS-OCT) is sensitive to sample motion during the wavelength sweep, which leads to image blurring and image artifacts. In line-field and full-field SS-OCT parallelization is achieved by using a line or area detector, respectively. Thus, approximately 1000 lines or images at different wavenumbers are acquired. The sweep duration is identically with the acquisition time of a complete B-scan or volume, rendering parallel SS-OCT more sensitive to motion artifacts than scanning OCT. The effect of axial motion on the measured spectra is similar to the effect of non-balanced group velocity dispersion (GVD) in the interferometer arms. It causes the apparent optical path lengths in the sample arm to vary with the wavenumber. Here we propose the cross-correlation of sub-bandwidth reconstructions (CCSBR) as a new algorithm that is capable of detecting and correcting the artifacts induced by axial motion in line-field or full-field SS-OCT as well as GVD mismatch in any Fourier-domain OCT (FD-OCT) setup. By cross-correlating images which were reconstructed from a limited spectral range of the interference signal, a phase error is determined which is used to correct the spectral modulation prior to the calculation of the A-scans. Performance of the algorithm is demonstrated on in vivo full-field SS-OCT images of skin and scanning FD-OCT of skin and retina. PMID:22418560

  2. Fourier-Domain Optical Coherence Tomography for Monitoring the Lower Tear Meniscus in Dry Eye after Acupuncture Treatment

    Tong Lin

    2015-01-01

    Full Text Available Dry eye is highly prevalent and has a significant impact on quality of life. Acupuncture was found to be effective to treat dry eye. However, little was known about the effect of acupuncture on different subtypes of dry eye. The objective of this study was to investigate the applicability of tear meniscus assessment by Fourier-domain optical coherence tomography in the evaluation of acupuncture treatment response in dry eye patients and to explore the effect of acupuncture on different subtypes of dry eye compared with artificial tear treatment. A total of 108 dry eye patients were randomized into acupuncture or artificial tear group. Each group was divided into three subgroups including lipid tear deficiency (LTD, Sjögren syndrome dry eye (SSDE, and non-Sjögren syndrome dry eye (Non-SSDE for data analysis. After 4-week treatment, the low tear meniscus parameters including tear meniscus height (TMH, tear meniscus depth (TMD, and tear meniscus area (TMA in the acupuncture group increased significantly for the LTD and Non-SSDE subgroups compared with both the baseline and the control groups (all P values < 0.05, but not for the SSDE. Acupuncture provided a measurable improvement of the tear meniscus dimensions for the Non-SSDE and LTD patients, but not for the SSDE patients.

  3. Assessment of Corneal Epithelial Thickness in Asymmetric Keratoconic Eyes and Normal Eyes Using Fourier Domain Optical Coherence Tomography

    S. Catalan

    2016-01-01

    Full Text Available Purpose. To compare the characteristics of asymmetric keratoconic eyes and normal eyes by Fourier domain optical coherence tomography (OCT corneal mapping. Methods. Retrospective corneal and epithelial thickness OCT data for 74 patients were compared in three groups of eyes: keratoconic (n=22 and normal fellow eyes (n=22 in patients with asymmetric keratoconus and normal eyes (n=104 in healthy subjects. Areas under the curve (AUC of receiver operator characteristic (ROC curves for each variable were compared across groups to indicate their discrimination capacity. Results. Three variables were found to differ significantly between fellow eyes and normal eyes (all p<0.05: minimum corneal thickness, thinnest corneal point, and central corneal thickness. These variables combined showed a high discrimination power to differentiate fellow eyes from normal eyes indicated by an AUC of 0.840 (95% CI: 0.762–0.918. Conclusions. Our findings indicate that topographically normal fellow eyes in patients with very asymmetric keratoconus differ from the eyes of healthy individuals in terms of their corneal epithelial and pachymetry maps. This type of information could be useful for an early diagnosis of keratoconus in topographically normal eyes.

  4. 3D video

    Lucas, Laurent; Loscos, Céline

    2013-01-01

    While 3D vision has existed for many years, the use of 3D cameras and video-based modeling by the film industry has induced an explosion of interest for 3D acquisition technology, 3D content and 3D displays. As such, 3D video has become one of the new technology trends of this century.The chapters in this book cover a large spectrum of areas connected to 3D video, which are presented both theoretically and technologically, while taking into account both physiological and perceptual aspects. Stepping away from traditional 3D vision, the authors, all currently involved in these areas, provide th

  5. 3D Animation Essentials

    Beane, Andy

    2012-01-01

    The essential fundamentals of 3D animation for aspiring 3D artists 3D is everywhere--video games, movie and television special effects, mobile devices, etc. Many aspiring artists and animators have grown up with 3D and computers, and naturally gravitate to this field as their area of interest. Bringing a blend of studio and classroom experience to offer you thorough coverage of the 3D animation industry, this must-have book shows you what it takes to create compelling and realistic 3D imagery. Serves as the first step to understanding the language of 3D and computer graphics (CG)Covers 3D anim

  6. Functional imaging of hemodynamic stimulus response in the rat retina with ultrahigh-speed spectral / Fourier domain OCT

    Choi, WooJhon; Baumann, Bernhard; Clermont, Allen C.; Feener, Edward P.; Boas, David A.; Fujimoto, James G.

    2013-03-01

    Measuring retinal hemodynamics in response to flicker stimulus is important for investigating pathophysiology in small animal models of diabetic retinopathy, because a reduction in the hyperemic response is thought to be one of the earliest changes in diabetic retinopathy. In this study, we investigated functional imaging of retinal hemodynamics in response to flicker stimulus in the rat retina using an ultrahigh speed spectral / Fourier domain OCT system at 840nm with an axial scan rate of 244kHz. At 244kHz the nominal axial velocity range that could be measured without phase wrapping was +/-37.7mm/s. Pulsatile total retinal arterial blood flow as a function of time was measured using an en face Doppler approach where a 200μm × 200μm area centered at the central retinal artery was repeatedly raster scanned at a volume acquisition rate of 55Hz. Three-dimensional capillary imaging was performed using speckle decorrelation which has minimal angle dependency compared to other angiography techniques based on OCT phase information. During OCT imaging, a flicker stimulus could be applied to the retina synchronously by inserting a dichroic mirror in the imaging interface. An acute transient increase in total retinal blood flow could be detected. At the capillary level, an increase in the degree of speckle decorrelation in capillary OCT angiography images could also be observed, which indicates an increase in the velocity of blood at the capillary level. This method promises to be useful for the investigation of small animal models of ocular diseases.

  7. Imaging retinal degeneration in mice by combining Fourier domain optical coherence tomography and fluorescent scanning laser ophthalmoscopy

    Hossein-Javaheri, Nima; Molday, Laurie L.; Xu, Jing; Molday, Robert S.; Sarunic, Marinko V.

    2009-02-01

    Visualization of the internal structures of the retina is critical for clinical diagnosis and monitoring of pathology as well as for medical research investigating the root causes of retinal degeneration. Optical Coherence Tomography (OCT) is emerging as the preferred technique for non-contact sub-surface depth-resolved imaging of the retina. The high resolution cross sectional images acquired in vivo by OCT can be compared to histology to visually delineate the retinal layers. The recent demonstration of the significant sensitivity increase obtained through use of Fourier domain (FD) detection with OCT has been used to facilitate high speed scanning for volumetric reconstruction of the retina in software. The images acquired by OCT are purely structural, relying on refractive index differences in the tissue for contrast, and do not provide information on the molecular content of the sample. We have constructed a FDOCT prototype and combined it with a fluorescent Scanning Laser Ophthalmoscope (fSLO) to permit real time alignment of the field of view on the retina. The alignment of the FDOCT system to the specimen is crucial for the registration of measurements taken throughout longitudinal studies. In addition, fluorescence detection has been integrated with the SLO to enable the en face localization of a molecular contrast signal, which is important for retinal angiography, and also for detection of autofluorescence associated with some forms of retinal degeneration, for example autofluorescence lipofuscin accumulations are associated with Stargardt's Macular Dystrophy. The integrated FD OCT/fSLO system was investigated for imaging the retina of the mice in vivo.

  8. Guiding glaucoma laser surgery using Fourier-domain optical coherence tomography at 1.3 μm

    Bayleyegn, Masreshaw D.; Makhlouf, Houssine; Crotti, Caroline; Plamann, Karsten; Dubois, Arnaud

    2012-06-01

    Glaucoma is a disease of the optic nerve that is usually associated with an increased internal pressure of the eye and can lead to a decreased vision and eventually blindness. It is the second leading cause of blindness worldwide with more than 80 million people affected and approximately 6 million blind. The standard clinical treatment for glaucoma, after unsuccessful administration of eyedrops and other treatments, is performing incisional surgery. However, due to post-surgical complications like scarring and wound healing, this conventional method has a global success rate of only about 60%. In comparison, as femtosecond laser surgery may be performed in volume and is a priori less invasive and less susceptible of causing scarring, glaucoma laser surgery could be a novel technique to supplement the conventional glaucoma surgery. We have been working on the development of a new tool for glaucoma treatment that uses an optimized femtosecond laser source centered at 1.65 μm wavelength for making the surgery and an imaging system based on optical coherence tomography (OCT) for guiding the laser surgery. In this proceeding, we present the results obtained so far on the development and utilization of Fourier-domain OCT imaging system working at 1.3 μm center wavelength for guiding the laser incision. Cross-sectional OCT image of pathological human cornea showing the Schlemm's canal, where the surgery is intended to be done, is presented. By coupling OCT imaging system with the laser incision system, we also demonstrate real-time imaging of femtosecond laser incision of cornea.

  9. Measurement of the total retinal blood flow using dual beam Fourier-domain Doppler optical coherence tomography with orthogonal detection planes

    Doblhoff-Dier, Veronika; Schmetterer, Leopold; Vilser, Walthard; Garhöfer, Gerhard; Gröschl, Martin; Rainer A. Leitgeb; René M. Werkmeister

    2014-01-01

    We present a system capable of measuring the total retinal blood flow using a combination of dual beam Fourier-domain Doppler optical coherence tomography with orthogonal detection planes and a fundus camera-based retinal vessel analyzer. Our results show a high degree of conformity of venous and arterial flows, which corroborates the validity of the measurements. In accordance with Murray’s law, the log-log regression coefficient between vessel diameter and blood flow was found to be ~3. The...

  10. Response of Retinal Blood Flow to Systemic Hyperoxia as Measured with Dual-Beam Bidirectional Doppler Fourier-Domain Optical Coherence Tomography

    Werkmeister, René M.; Palkovits, Stefan; Told, Reinhard; Gröschl, Martin; Leitgeb, Rainer A.; Garhöfer, Gerhard; Schmetterer, Leopold

    2012-01-01

    Purpose There is a long-standing interest in the study of retinal blood flow in humans. In the recent years techniques have been established to measure retinal perfusion based on optical coherence tomography (OCT). In the present study we used a technique called dual-beam bidirectional Doppler Fourier-domain optical coherence tomography (FD-OCT) to characterize the effects of 100% oxygen breathing on retinal blood flow. These data were compared to data obtained with a laser Doppler velocimete...

  11. Fourier-domain optical coherence tomography of eyes with idiopathic epiretinal membrane: correlation between macular morphology and visual function

    Pilli, S; Lim, P; Zawadzki, R J; Choi, S S; Werner, J S; Park, S S

    2011-01-01

    Purpose The purpose of this study is to evaluate the macular morphological changes associated with idiopathic epiretinal membrane (iERM) using high-resolution Fourier-domain optical coherence tomography (FD-OCT), as they correlate with visual acuity and microperimetry (MP-1). Methods In all, 24 eyes (19 subjects) with iERM were imaged prospectively using FD-OCT with axial resolution of 4.5 μm and transverse resolution of 10 to 15 μm. MP-1 and Stratus OCT were carried out in a subset of eyes. Results The mean log of the minimum angle of resolution best-corrected visual acuity (BCVA) was 0.18±0.16 (range: −0.08 to 0.48, Snellen equivalent 20/15−1 to 20/60). ERM was visualized in all 24 eyes with FD-OCT and in 17 eyes (85%) of 20 eyes imaged with Stratus OCT. Although BCVA correlated with macular thickening in the central 1 mm sub-field of the Stratus ETDRS (P=0.0005) and macular volume (central 3 mm area) on FD-OCT (P<0.0001), macular thickening on thickness map and volume correlated poorly with decrease in macular sensitivity on MP-1 (P=0.16). On FD-OCT, foveal morphological changes correlated best with decrease in BCVA, the strongest being central foveal thickness (P<0.0001). Other significant changes included blurring of the foveal inner segment–outer segment (IS–OS) junction and/or Verhoeff's membrane, vitreal displacement of foveal outer nuclear layer and foveal detachment (P<0.05). Foveal IS–OS junction disruption was seen in 25% of eyes on Stratus OCT but in none of the eyes on FD-OCT. Conclusion FD-OCT allowed improved visualization of ERM and associated foveal morphological changes that correlated best with BCVA. Macular thickening correlated weakly with decreased macular function as assessed by MP-1. PMID:21436847

  12. Solid works 3D

    This book explains modeling of solid works 3D and application of 3D CAD/CAM. The contents of this book are outline of modeling such as CAD and 2D and 3D, solid works composition, method of sketch, writing measurement fixing, selecting projection, choosing condition of restriction, practice of sketch, making parts, reforming parts, modeling 3D, revising 3D modeling, using pattern function, modeling necessaries, assembling, floor plan, 3D modeling method, practice floor plans for industrial engineer data aided manufacturing, processing of CAD/CAM interface.

  13. Limited Feedback for 3D Massive MIMO under 3D-UMa and 3D-UMi Scenarios

    Zheng Hu

    2015-01-01

    Full Text Available For three-dimensional (3D massive MIMO utilizing the uniform rectangular array (URA in the base station (BS, we propose a limited feedback transmission scheme in which the channel state information (CSI feedback operations for horizontal domain and vertical domain are separate. Compared to the traditional feedback scheme, the scheme can reduce the feedback overhead, code word index search complexity, and storage requirement. Also, based on the zenith of departure angle (ZoD distribution in 3D-Urban Macro Cell (3D-UMa and 3D-Urban Micro Cell (3D-UMi scenarios, we propose the angle quantization codebook for vertical domain, while the codebook of long term evolution-advanced (LTE-Advanced is still adopted in horizontal domain to preserve compatibility with the LTE-Advanced. Based on the angle quantization codebook, the subsampled 3-bit DFT codebook is designed for vertical domain. The system-level simulation results reveal that, to compromise the feedback overhead and system performance, 2-bit codebook for 3D-UMa scenario and 3-bit codebook for 3D-UMi scenario can meet requirements in vertical domain. The feedback period for vertical domain can also be extended appropriately to reduce the feedback overhead.

  14. Open 3D Projects

    Felician ALECU

    2010-01-01

    Full Text Available Many professionals and 3D artists consider Blender as being the best open source solution for 3D computer graphics. The main features are related to modeling, rendering, shading, imaging, compositing, animation, physics and particles and realtime 3D/game creation.

  15. Comment on '3-D frequency-domain seismic wave modelling in heterogeneous, anisotropic media using a Gaussian quadrature grid approach' by Bing Zhou and S. A. Greenhalgh

    de Basabe, Jonás D.

    2011-08-01

    Zhou & Greenhalgh have recently presented an application of the Gaussian quadrature grid to seismic modelling in which the authors propose a meshing scheme that partitions the domain independently of the discontinuities in the media parameters. This comment aims to clarify the implications that this strategy has on the accuracy.

  16. 3d-3d correspondence revisited

    Chung, Hee-Joong; Dimofte, Tudor; Gukov, Sergei; Sułkowski, Piotr

    2016-04-01

    In fivebrane compactifications on 3-manifolds, we point out the importance of all flat connections in the proper definition of the effective 3d {N}=2 theory. The Lagrangians of some theories with the desired properties can be constructed with the help of homological knot invariants that categorify colored Jones polynomials. Higgsing the full 3d theories constructed this way recovers theories found previously by Dimofte-Gaiotto-Gukov. We also consider the cutting and gluing of 3-manifolds along smooth boundaries and the role played by all flat connections in this operation.

  17. IZDELAVA TISKALNIKA 3D

    Brdnik, Lovro

    2015-01-01

    Diplomsko delo analizira trenutno stanje 3D tiskalnikov na trgu. Prikazan je razvoj in principi delovanja 3D tiskalnikov. Predstavljeni so tipi 3D tiskalnikov, njihove prednosti in slabosti. Podrobneje je predstavljena zgradba in delovanje koračnih motorjev. Opravljene so meritve koračnih motorjev. Opisana je programska oprema za rokovanje s 3D tiskalniki in komponente, ki jih potrebujemo za izdelavo. Diploma se oklepa vprašanja, ali je izdelava 3D tiskalnika bolj ekonomična kot pa naložba v ...

  18. 3D Cameras: 3D Computer Vision of Wide Scope

    May, Stefan; Pervoelz, Kai; Surmann, Hartmut

    2007-01-01

    First of all, a short comparison of range sensors and their underlying principles was given. The chapter further focused on 3D cameras. The latest innovations have given a significant improvement for the measurement accuracy, wherefore this technology has attracted attention in the robotics community. This was also the motivation for the examination in this chapter. On this account, several applications were presented, which represents common problems in the domain of autonomous robotics. For...

  19. 3D and Education

    Meulien Ohlmann, Odile

    2013-02-01

    Today the industry offers a chain of 3D products. Learning to "read" and to "create in 3D" becomes an issue of education of primary importance. 25 years professional experience in France, the United States and Germany, Odile Meulien set up a personal method of initiation to 3D creation that entails the spatial/temporal experience of the holographic visual. She will present some different tools and techniques used for this learning, their advantages and disadvantages, programs and issues of educational policies, constraints and expectations related to the development of new techniques for 3D imaging. Although the creation of display holograms is very much reduced compared to the creation of the 90ies, the holographic concept is spreading in all scientific, social, and artistic activities of our present time. She will also raise many questions: What means 3D? Is it communication? Is it perception? How the seeing and none seeing is interferes? What else has to be taken in consideration to communicate in 3D? How to handle the non visible relations of moving objects with subjects? Does this transform our model of exchange with others? What kind of interaction this has with our everyday life? Then come more practical questions: How to learn creating 3D visualization, to learn 3D grammar, 3D language, 3D thinking? What for? At what level? In which matter? for whom?

  20. Dissecting the influence of Mg2+ on 3D architecture and ligand-binding of the guanine-sensing riboswitch aptamer domain

    Buck, Janina; Noeske, Jonas; Wöhnert, Jens; Schwalbe, Harald

    2010-01-01

    Long-range tertiary interactions determine the three-dimensional structure of a number of metabolite-binding riboswitch RNA elements and were found to be important for their regulatory function. For the guanine-sensing riboswitch of the Bacillus subtilis xpt-pbuX operon, our previous NMR-spectroscopic studies indicated pre-formation of long-range tertiary contacts in the ligand-free state of its aptamer domain. Loss of the structural pre-organization in a mutant of this RNA (G37A/C61U) result...

  1. On the calculation of scattered fields by 3-D structure in the time-domain electromagnetic (TDEM) method; Jikan ryoiki denjiho ni okeru sanjigen kozo kara no sanranba no keisan ni tsuite

    Murakami, Y. [Geological Survey of Japan, Tsukuba (Japan); Saito, A.; Oya, T. [Mitsui Mineral Development Engineering Co. Ltd., Tokyo (Japan)

    1996-10-01

    This paper describes the calculation method of 3-D underground structures in TDME method which measures only field components. Recently, FDTD method was developed as calculation method in time domain difference calculus, and the forward analysis accuracy of 3-D fields was rapidly improved. The survey results using a large-scale loop (600m{times}360m) were numerically analyzed by FDTD method. 16 measuring lines were prepared in both X and Y directions, and measuring points were prepared on intersection points of the measuring lines. Since signal current is staircase one, step and impulse responses of the ground were determined by calculating magnetic field and its time differentiation. The rectangular body (120m{times}120m{times}100m) of 0.2S/m in conductivity (5 ohm m in resistivity) was installed 160m under the ground as 3-D resistivity anomaly. The ground of 0.01S/m (100 ohm m) was assumed. Time variation in horizontal magnetic field vector plot of impulse responses of the uniform ground could be observed. The position of the resistivity anomaly could be also determined from spacial differentiation of magnetic field of grid pattern measuring points. 1 ref., 6 figs.

  2. Compression of 3D models with NURBS

    Santa Cruz Ducci, Diego; Ebrahimi, Touradj

    2005-01-01

    With recent progress in computing, algorithmics and telecommunications, 3D models are increasingly used in various multimedia applications. Examples include visualization, gaming, entertainment and virtual reality. In the multimedia domain 3D models have been traditionally represented as polygonal meshes. This piecewise planar representation can be thought of as the analogy of bitmap images for 3D surfaces. As bitmap images, they enjoy great flexibility and are particularly well suited to des...

  3. Development of a phase-sensitive Fourier domain optical coherence tomography system to measure mouse organ of Corti vibrations in two cochlear turns

    In this study, we have developed a phase-sensitive Fourier-domain optical coherence tomography system to simultaneously measure the in vivo inner ear vibrations in the hook area and second turn of the mouse cochlea. This technical development will enable measurement of intra-cochlear distortion products at ideal locations such as the distortion product generation site and reflection site. This information is necessary to un-mix the complex mixture of intra-cochlear waves comprising the DPOAE and thus leads to the non-invasive identification of the local region of cochlear damage

  4. Development of a phase-sensitive Fourier domain optical coherence tomography system to measure mouse organ of Corti vibrations in two cochlear turns

    Ramamoorthy, Sripriya; Zhang, Yuan; Petrie, Tracy; Jacques, Steven; Wang, Ruikang; Nuttall, Alfred L.

    2015-12-01

    In this study, we have developed a phase-sensitive Fourier-domain optical coherence tomography system to simultaneously measure the in vivo inner ear vibrations in the hook area and second turn of the mouse cochlea. This technical development will enable measurement of intra-cochlear distortion products at ideal locations such as the distortion product generation site and reflection site. This information is necessary to un-mix the complex mixture of intra-cochlear waves comprising the DPOAE and thus leads to the non-invasive identification of the local region of cochlear damage.

  5. Transit Timing Observations from Kepler: III. Confirmation of 4 Multiple Planet Systems by a Fourier-Domain Study of Anti-correlated Transit Timing Variations

    Steffen, Jason H.; /Fermilab; Fabrycky, Daniel C.; /Lick Observ.; Ford, Eric B.; /Florida U.; Carter, Joshua A.; /Harvard-Smithsonian Ctr. Astrophys.; Fressin, Francois; /Harvard-Smithsonian Ctr. Astrophys.; Holman, Matthew J.; /Harvard-Smithsonian Ctr. Astrophys.; Lissauer, Jack J.; /NASA, Ames; Rowe, Jason F.; /SETI Inst., Mtn. View /NASA, Ames; Ragozzine, Darin; /Harvard-Smithsonian Ctr. Astrophys.; Welsh, William F.; /Caltech; Borucki, William J.; /NASA, Ames /UC, Santa Barbara

    2012-01-01

    We present a method to confirm the planetary nature of objects in systems with multiple transiting exoplanet candidates. This method involves a Fourier-domain analysis of the deviations in the transit times from a constant period that result from dynamical interactions within the system. The combination of observed anticorrelations in the transit times and mass constraints from dynamical stability allow us to claim the discovery of four planetary systems, Kepler-25, Kepler-26, Kepler-27 and Kepler-28, containing eight planets and one additional planet candidate.

  6. Transit Timing Observations from Kepler: III. Confirmation of 4 Multiple Planet Systems by a Fourier-Domain Study of Anti-correlated Transit Timing Variations

    Steffen, Jason H; Ford, Eric B; Carter, Joshua A; Desert, Jean-Michel; Fressin, Francois; Holman, Matthew J; Lissauer, Jack J; Moorhead, Althea V; Rowe, Jason F; Ragozzine, Darin; Welsh, William F; Batalha, Natalie M; Borucki, William J; Buchhave, Lars A; Bryson, Steve; Caldwell, Douglas A; Charbonneau, David; Ciardi, David R; Cochran, William D; Endl, Michael; Everett, Mark E; Gautier, Thomas N; Gilliland, Ron L; Girouard, Forrest R; Jenkins, Jon M; Horch, Elliott; Howell, Steve B; Isaacson, Howard; Klaus, Todd C; Koch, David G; Latham, David W; Li, Jie; Lucas, Philip; MacQueen, Phillip J; Marcy, Geoffrey W; McCauliff, Sean; Middour, Christopher K; Morris, Robert L; Mullally, Fergal R; Quinn, Samuel N; Quintana, Elisa V; Shporer, Avi; Still, Martin; Tenenbaum, Peter; Thompson, Susan E; Twicken, Joseph D; Van Cleve, Jeffery

    2012-01-01

    We present a method to confirm the planetary nature of objects in systems with multiple transiting exoplanet candidates. This method involves a Fourier-Domain analysis of the deviations in the transit times from a constant period that result from dynamical interactions within the system. The combination of observed anti-correlations in the transit times and mass constraints from dynamical stability allow us to claim the discovery of four planetary systems Kepler-25, Kepler-26, Kepler-27, and Kepler-28, containing eight planets and one additional planet candidate.

  7. Ultra-high-speed optical serial-to-parallel data conversion by time-domain optical Fourier transformation in a silicon nanowire

    Mulvad, Hans Christian Hansen; Palushani, Evarist; Hu, Hao; Ji, Hua; Lillieholm, Mads; Galili, Michael; Clausen, Anders; Pu, Minhao; Yvind, Kresten; Hvam, Jørn Märcher; Jeppesen, Palle; Oxenløwe, Leif Katsuo

    2011-01-01

    We demonstrate conversion from 64 × 10 Gbit/s optical timedivision multiplexed (OTDM) data to dense wavelength division multiplexed (DWDM) data with 25 GHz spacing. The conversion is achieved by time-domain optical Fourier transformation (OFT) based on four-wave mixing (FWM) in a 3.6 mm long silicon nanowire. A total of 40 out of 64 tributaries of a 64 × 10 Gbit/s OTDM-DPSK data signal are simultaneously converted with a bit-error rate (BER) performance below the 2 × 10−3 FEC limit. Using a 5...

  8. Development of a phase-sensitive Fourier domain optical coherence tomography system to measure mouse organ of Corti vibrations in two cochlear turns

    Ramamoorthy, Sripriya [Oregon Hearing Research Center, Oregon Health & Science University, Portland, Oregon (United States); Zhang, Yuan; Jacques, Steven [Department of Biomedical Engineering, Oregon Health & Science University, Portland, Oregon (United States); Petrie, Tracy; Wang, Ruikang [Department of Bioengineering, University of Washington, Seattle, Washington (United States); Nuttall, Alfred L. [Oregon Hearing Research Center, Oregon Health & Science University, Portland, Oregon (United States); Kresge Hearing Research Institute, The University of Michigan, Ann Arbor, Michigan (United States)

    2015-12-31

    In this study, we have developed a phase-sensitive Fourier-domain optical coherence tomography system to simultaneously measure the in vivo inner ear vibrations in the hook area and second turn of the mouse cochlea. This technical development will enable measurement of intra-cochlear distortion products at ideal locations such as the distortion product generation site and reflection site. This information is necessary to un-mix the complex mixture of intra-cochlear waves comprising the DPOAE and thus leads to the non-invasive identification of the local region of cochlear damage.

  9. Fast numerical autofocus of multispectral complex fields in digital holographic microscopy with a criterion based on the phase in the Fourier domain.

    Dohet-Eraly, Jérôme; Yourassowsky, Catherine; Dubois, Frank

    2016-09-01

    The knowledge of the complex amplitude of optical fields, that is, both quantitative phase and intensity, enables numeric reconstruction along the optical axis. Nonetheless, a criterion is required for autofocusing. This Letter presents a robust and rapid refocusing criterion suitable for color interferometric digital holographic microscopy, and, more generally, for applications where complex amplitude is known for at least two different wavelengths. This criterion uses the phase in the Fourier domain, which is compared among wavelengths. It is applicable whatever the nature of the observed object: opaque, refractive, or both mixed. The method is validated with simulated and experimental holograms. PMID:27607975

  10. Retinal morphology in patients with BBS1 and BBS10 related Bardet–Biedl Syndrome evaluated by Fourier-domain optical coherence tomography

    Gerth, C.; Zawadzki, RJ; Werner, JS; Heon, E

    2007-01-01

    Retinal dystrophy in Bardet–Biedl Syndrome (BBS) is caused by defective genes that are expressed within ciliated cells such as photoreceptors. The purpose of this study was to characterize and compare the retinal structure and lamination of two groups of patients, carrying mutations in BBS1 or BBS10. Eight patients with BBS (ages 11.9–28.5 years) and mutations in BBS1 (4/8) or BBS10 (4/8) were tested. A high-resolution hand-held probe Fourier-domain optical coherence tomography system (Fd-OCT...

  11. 3D virtuel udstilling

    Tournay, Bruno; Rüdiger, Bjarne

    2006-01-01

    3d digital model af Arkitektskolens gård med virtuel udstilling af afgangsprojekter fra afgangen sommer 2006. 10 s.......3d digital model af Arkitektskolens gård med virtuel udstilling af afgangsprojekter fra afgangen sommer 2006. 10 s....

  12. Tumor-penetrating peptide fused EGFR single-domain antibody enhances cancer drug penetration into 3D multicellular spheroids and facilitates effective gastric cancer therapy

    Sha, Huizi; Zou, Zhengyun; Xin, Kai; Bian, Xinyu; Cai, Xueting; Lu, Wuguang; Chen, Jiao; Chen, Gang; Huang, Leaf; Blair, Andrew M.; Cao, Peng; Liu, Baorui

    2016-01-01

    Human tumors, including gastric cancer, frequently express high levels of epidermal growth factor receptors (EGFRs), which are associated with a poor prognosis. Targeted delivery of anticancer drugs to cancerous tissues shows potential in sparing unaffected tissues. However, it has been a major challenge for drug penetration in solid tumor tissues due to the complicated tumor microenvironment. We have constructed a recombinant protein named anti-EGFR-iRGD consisting of an anti-EGFR VHH (the variable domain from the heavy chain of the antibody) fused to iRGD, a tumor-specific binding peptide with high permeability. Anti-EGFR-iRGD, which targets EGFR and αvβ3, spreads extensively throughout both the multicellular spheroids and the tumor mass. The recombinant protein anti-EGFR-iRGD also exhibited antitumor activity in tumor cell lines, multicellular spheroids, and mice. Moreover, anti-EGFR-iRGD could improve anticancer drugs, such as doxorubicin (DOX), bevacizumab, nanoparticle permeability and efficacy in multicellular spheroids. This study draws attention to the importance of iRGD peptide in the therapeutic approach of anti-EGFR-iRGD. As a consequence, anti-EGFR-iRGD could be a drug candidate for cancer treatment and a useful adjunct of other anticancer drugs. PMID:25553823

  13. A parallel domain decomposition-based implicit method for the Cahn-Hilliard-Cook phase-field equation in 3D

    Zheng, Xiang

    2015-03-01

    We present a numerical algorithm for simulating the spinodal decomposition described by the three dimensional Cahn-Hilliard-Cook (CHC) equation, which is a fourth-order stochastic partial differential equation with a noise term. The equation is discretized in space and time based on a fully implicit, cell-centered finite difference scheme, with an adaptive time-stepping strategy designed to accelerate the progress to equilibrium. At each time step, a parallel Newton-Krylov-Schwarz algorithm is used to solve the nonlinear system. We discuss various numerical and computational challenges associated with the method. The numerical scheme is validated by a comparison with an explicit scheme of high accuracy (and unreasonably high cost). We present steady state solutions of the CHC equation in two and three dimensions. The effect of the thermal fluctuation on the spinodal decomposition process is studied. We show that the existence of the thermal fluctuation accelerates the spinodal decomposition process and that the final steady morphology is sensitive to the stochastic noise. We also show the evolution of the energies and statistical moments. In terms of the parallel performance, it is found that the implicit domain decomposition approach scales well on supercomputers with a large number of processors. © 2015 Elsevier Inc.

  14. A parallel domain decomposition-based implicit method for the Cahn–Hilliard–Cook phase-field equation in 3D

    We present a numerical algorithm for simulating the spinodal decomposition described by the three dimensional Cahn–Hilliard–Cook (CHC) equation, which is a fourth-order stochastic partial differential equation with a noise term. The equation is discretized in space and time based on a fully implicit, cell-centered finite difference scheme, with an adaptive time-stepping strategy designed to accelerate the progress to equilibrium. At each time step, a parallel Newton–Krylov–Schwarz algorithm is used to solve the nonlinear system. We discuss various numerical and computational challenges associated with the method. The numerical scheme is validated by a comparison with an explicit scheme of high accuracy (and unreasonably high cost). We present steady state solutions of the CHC equation in two and three dimensions. The effect of the thermal fluctuation on the spinodal decomposition process is studied. We show that the existence of the thermal fluctuation accelerates the spinodal decomposition process and that the final steady morphology is sensitive to the stochastic noise. We also show the evolution of the energies and statistical moments. In terms of the parallel performance, it is found that the implicit domain decomposition approach scales well on supercomputers with a large number of processors

  15. Higher-order in time "quasi-unconditionally stable" ADI solvers for the compressible Navier-Stokes equations in 2D and 3D curvilinear domains

    Bruno, Oscar

    2015-01-01

    This paper introduces alternating-direction implicit (ADI) solvers of higher order of time-accuracy (orders two to six) for the compressible Navier-Stokes equations in two- and three-dimensional curvilinear domains. The higher-order accuracy in time results from 1) An application of the backward differentiation formulae time-stepping algorithm (BDF) in conjunction with 2) A BDF-like extrapolation technique for certain components of the nonlinear terms (which makes use of nonlinear solves unnecessary), as well as 3) A novel application of the Douglas-Gunn splitting (which greatly facilitates handling of boundary conditions while preserving higher-order accuracy in time). As suggested by our theoretical analysis of the algorithms for a variety of special cases, an extensive set of numerical experiments clearly indicate that all of the BDF-based ADI algorithms proposed in this paper are "quasi-unconditionally stable" in the following sense: each algorithm is stable for all couples $(h,\\Delta t)$ of spatial and t...

  16. Underwater 3D filming

    Roberto Rinaldi

    2014-12-01

    Full Text Available After an experimental phase of many years, 3D filming is now effective and successful. Improvements are still possible, but the film industry achieved memorable success on 3D movie’s box offices due to the overall quality of its products. Special environments such as space (“Gravity” and the underwater realm look perfect to be reproduced in 3D. “Filming in space” was possible in “Gravity” using special effects and computer graphic. The underwater realm is still difficult to be handled. Underwater filming in 3D was not that easy and effective as filming in 2D, since not long ago. After almost 3 years of research, a French, Austrian and Italian team realized a perfect tool to film underwater, in 3D, without any constrains. This allows filmmakers to bring the audience deep inside an environment where they most probably will never have the chance to be.

  17. Higher-order in time "quasi-unconditionally stable" ADI solvers for the compressible Navier-Stokes equations in 2D and 3D curvilinear domains

    Bruno, Oscar P.; Cubillos, Max

    2016-02-01

    This paper introduces alternating-direction implicit (ADI) solvers of higher order of time-accuracy (orders two to six) for the compressible Navier-Stokes equations in two- and three-dimensional curvilinear domains. The higher-order accuracy in time results from 1) An application of the backward differentiation formulae time-stepping algorithm (BDF) in conjunction with 2) A BDF-like extrapolation technique for certain components of the nonlinear terms (which makes use of nonlinear solves unnecessary), as well as 3) A novel application of the Douglas-Gunn splitting (which greatly facilitates handling of boundary conditions while preserving higher-order accuracy in time). As suggested by our theoretical analysis of the algorithms for a variety of special cases, an extensive set of numerical experiments clearly indicate that all of the BDF-based ADI algorithms proposed in this paper are "quasi-unconditionally stable" in the following sense: each algorithm is stable for all couples (h , Δt)of spatial and temporal mesh sizes in a problem-dependent rectangular neighborhood of the form (0 ,Mh) × (0 ,Mt). In other words, for each fixed value of Δt below a certain threshold, the Navier-Stokes solvers presented in this paper are stable for arbitrarily small spatial mesh-sizes. The second-order formulation has further been rigorously shown to be unconditionally stable for linear hyperbolic and parabolic equations in two-dimensional space. Although implicit ADI solvers for the Navier-Stokes equations with nominal second-order of temporal accuracy have been proposed in the past, the algorithms presented in this paper are the first ADI-based Navier-Stokes solvers for which second-order or better accuracy has been verified in practice under non-trivial (non-periodic) boundary conditions.

  18. A Numerical Method for Solving the 3D Unsteady Incompressible Navier-Stokes Equations in Curvilinear Domains with Complex Immersed Boundaries.

    Ge, Liang; Sotiropoulos, Fotis

    2007-08-01

    A novel numerical method is developed that integrates boundary-conforming grids with a sharp interface, immersed boundary methodology. The method is intended for simulating internal flows containing complex, moving immersed boundaries such as those encountered in several cardiovascular applications. The background domain (e.g the empty aorta) is discretized efficiently with a curvilinear boundary-fitted mesh while the complex moving immersed boundary (say a prosthetic heart valve) is treated with the sharp-interface, hybrid Cartesian/immersed-boundary approach of Gilmanov and Sotiropoulos [1]. To facilitate the implementation of this novel modeling paradigm in complex flow simulations, an accurate and efficient numerical method is developed for solving the unsteady, incompressible Navier-Stokes equations in generalized curvilinear coordinates. The method employs a novel, fully-curvilinear staggered grid discretization approach, which does not require either the explicit evaluation of the Christoffel symbols or the discretization of all three momentum equations at cell interfaces as done in previous formulations. The equations are integrated in time using an efficient, second-order accurate fractional step methodology coupled with a Jacobian-free, Newton-Krylov solver for the momentum equations and a GMRES solver enhanced with multigrid as preconditioner for the Poisson equation. Several numerical experiments are carried out on fine computational meshes to demonstrate the accuracy and efficiency of the proposed method for standard benchmark problems as well as for unsteady, pulsatile flow through a curved, pipe bend. To demonstrate the ability of the method to simulate flows with complex, moving immersed boundaries we apply it to calculate pulsatile, physiological flow through a mechanical, bileaflet heart valve mounted in a model straight aorta with an anatomical-like triple sinus. PMID:19194533

  19. Blender 3D cookbook

    Valenza, Enrico

    2015-01-01

    This book is aimed at the professionals that already have good 3D CGI experience with commercial packages and have now decided to try the open source Blender and want to experiment with something more complex than the average tutorials on the web. However, it's also aimed at the intermediate Blender users who simply want to go some steps further.It's taken for granted that you already know how to move inside the Blender interface, that you already have 3D modeling knowledge, and also that of basic 3D modeling and rendering concepts, for example, edge-loops, n-gons, or samples. In any case, it'

  20. Imaging Nuclear Waste Plumes at the Hanford Site using Large Domain 3D High Resolution Resistivity Methods and the New Parallel-Processing EarthImager3DCL Program

    Greenwood, J.; Rucker, D.; Levitt, M.; Yang, X.; Lagmanson, M.

    2007-12-01

    High Resolution Resistivity data is currently used by hydroGEOPHYSICS, Inc to detect and characterize the distribution of suspected contaminant plumes beneath leaking tanks and disposal sites within the U.S. Department of Energy Hanford Site, in Eastern Washington State. The success of the characterization effort has led to resistivity data acquisition in extremely large survey areas exceeding 0.6 km2 and containing over 6,000 electrodes. Optimal data processing results are achieved by utilizing 105 data points within a single finite difference or finite element model domain. The large number of measurements and electrodes and high resolution of the modeling domain requires a model mesh of over 106 nodes. Existing commercially available resistivity inversion software could not support the domain size due to software and hardware limitations. hydroGEOPHYSICS, Inc teamed with Advanced Geosciences, Inc to advance the existing EarthImager3D inversion software to allow for parallel-processing and large memory support under a 64 bit operating system. The basis for the selection of EarthImager3D is demonstrated with a series of verification tests and benchmark comparisons using synthetic test models, field scale experiments and 6 months of intensive modeling using an array of multi-processor servers. The results of benchmark testing show equivalence to other industry standard inversion codes that perform the same function on significantly smaller domain models. hydroGEOPHYSICS, Inc included the use of 214 steel-cased monitoring wells as "long electrodes", 6000 surface electrodes and 8 buried point source electrodes. Advanced Geosciences, Inc. implemented a long electrode modeling function to support the Hanford Site well casing data. This utility is unique to commercial resistivity inversion software, and was evaluated through a series of laboratory and field scale tests using engineered subsurface plumes. The Hanford site is an ideal proving ground for these methods due

  1. Real-time all-optical OFDM transmission system based on time-domain optical fourier transformation

    Guan, Pengyu; Kong, Deming; Røge, Kasper Meldgaard;

    2014-01-01

    We propose a novel simple all-optical OFDM transmission system based on time-domain OFT using time-lenses. A real-time 160 Gbit/s DPSK OFDM transmission with 16 decorrelated data subcarriers is successfully demonstrated over 100 km.......We propose a novel simple all-optical OFDM transmission system based on time-domain OFT using time-lenses. A real-time 160 Gbit/s DPSK OFDM transmission with 16 decorrelated data subcarriers is successfully demonstrated over 100 km....

  2. 3D Digital Modelling

    Hundebøl, Jesper

    wave of new building information modelling tools demands further investigation, not least because of industry representatives' somewhat coarse parlance: Now the word is spreading -3D digital modelling is nothing less than a revolution, a shift of paradigm, a new alphabet... Research qeustions. Based...... on empirical probes (interviews, observations, written inscriptions) within the Danish construction industry this paper explores the organizational and managerial dynamics of 3D Digital Modelling. The paper intends to - Illustrate how the network of (non-)human actors engaged in the promotion (and arrest) of 3......D Modelling (in Denmark) stabilizes - Examine how 3D Modelling manifests itself in the early design phases of a construction project with a view to discuss the effects hereof for i.a. the management of the building process. Structure. The paper introduces a few, basic methodological concepts...

  3. Professional Papervision3D

    Lively, Michael

    2010-01-01

    Professional Papervision3D describes how Papervision3D works and how real world applications are built, with a clear look at essential topics such as building websites and games, creating virtual tours, and Adobe's Flash 10. Readers learn important techniques through hands-on applications, and build on those skills as the book progresses. The companion website contains all code examples, video step-by-step explanations, and a collada repository.

  4. Trabecular-iris circumference volume in open angle eyes using swept-source fourier domain anterior segment optical coherence tomography.

    Rigi, Mohammed; Blieden, Lauren S; Nguyen, Donna; Chuang, Alice Z; Baker, Laura A; Bell, Nicholas P; Lee, David A; Mankiewicz, Kimberly A; Feldman, Robert M

    2014-01-01

    Purpose. To introduce a new anterior segment optical coherence tomography parameter, trabecular-iris circumference volume (TICV), which measures the integrated volume of the peripheral angle, and establish a reference range in normal, open angle eyes. Methods. One eye of each participant with open angles and a normal anterior segment was imaged using 3D mode by the CASIA SS-1000 (Tomey, Nagoya, Japan). Trabecular-iris space area (TISA) and TICV at 500 and 750 µm were calculated. Analysis of covariance was performed to examine the effect of age and its interaction with spherical equivalent. Results. The study included 100 participants with a mean age of 50 (±15) years (range 20-79). TICV showed a normal distribution with a mean (±SD) value of 4.75 µL (±2.30) for TICV500 and a mean (±SD) value of 8.90 µL (±3.88) for TICV750. Overall, TICV showed an age-related reduction (P = 0.035). In addition, angle volume increased with increased myopia for all age groups, except for those older than 65 years. Conclusions. This study introduces a new parameter to measure peripheral angle volume, TICV, with age-adjusted normal ranges for open angle eyes. Further investigation is warranted to determine the clinical utility of this new parameter. PMID:25210623

  5. Trabecular-Iris Circumference Volume in Open Angle Eyes Using Swept-Source Fourier Domain Anterior Segment Optical Coherence Tomography

    Mohammed Rigi

    2014-01-01

    Full Text Available Purpose. To introduce a new anterior segment optical coherence tomography parameter, trabecular-iris circumference volume (TICV, which measures the integrated volume of the peripheral angle, and establish a reference range in normal, open angle eyes. Methods. One eye of each participant with open angles and a normal anterior segment was imaged using 3D mode by the CASIA SS-1000 (Tomey, Nagoya, Japan. Trabecular-iris space area (TISA and TICV at 500 and 750 µm were calculated. Analysis of covariance was performed to examine the effect of age and its interaction with spherical equivalent. Results. The study included 100 participants with a mean age of 50 (±15 years (range 20–79. TICV showed a normal distribution with a mean (±SD value of 4.75 µL (±2.30 for TICV500 and a mean (±SD value of 8.90 µL (±3.88 for TICV750. Overall, TICV showed an age-related reduction (P=0.035. In addition, angle volume increased with increased myopia for all age groups, except for those older than 65 years. Conclusions. This study introduces a new parameter to measure peripheral angle volume, TICV, with age-adjusted normal ranges for open angle eyes. Further investigation is warranted to determine the clinical utility of this new parameter.

  6. Measurement of the total retinal blood flow using dual beam Fourier-domain Doppler optical coherence tomography with orthogonal detection planes

    Doblhoff-Dier, Veronika; Schmetterer, Leopold; Vilser, Walthard; Garhöfer, Gerhard; Gröschl, Martin; Leitgeb, Rainer A.; Werkmeister, René M.

    2014-01-01

    We present a system capable of measuring the total retinal blood flow using a combination of dual beam Fourier-domain Doppler optical coherence tomography with orthogonal detection planes and a fundus camera-based retinal vessel analyzer. Our results show a high degree of conformity of venous and arterial flows, which corroborates the validity of the measurements. In accordance with Murray’s law, the log-log regression coefficient between vessel diameter and blood flow was found to be ~3. The blood’s velocity scaled linearly with the vessel diameter at higher diameters (> 60 µm), but showed a clear divergence from the linear dependence at lower diameters. Good agreement with literature data and the large range and high measurement sensitivity point to a high potential for further investigations. PMID:24575355

  7. Uniform spacing interrogation of a Fourier domain mode-locked fiber Bragg grating sensor system using a polarization-maintaining fiber Sagnac interferometer

    A novel linearized interrogation method is presented for a Fourier domain mode-locked (FDML) fiber Bragg grating (FBG) sensor system. In a high speed regime over several tens of kHz modulations, a sinusoidal wave is available to scan the center wavelength of an FDML wavelength-swept laser, instead of a conventional triangular wave. However, sinusoidal wave modulation suffers from an exaggerated non-uniform wavelength-spacing response in demodulating the time-encoded parameter to the absolute wavelength. In this work, the calibration signal from a polarization-maintaining fiber Sagnac interferometer shares the FDML wavelength-swept laser for FBG sensors to convert the time-encoded FBG signal to the wavelength-encoded uniform-spacing signal. (paper)

  8. Magnetic model for Mn2La2 developed from spectroscopic studies with inelastic neutron scattering and frequency-domain Fourier-transform THz EPR

    Molecular nanomagnets which contain several magnetic centers with a large single-ion magnetic anisotropy are of general interest, because they could lead to interesting phenomena such as single-molecule magnet (SMM) behavior. We performed spectroscopic experiments on Mn2La2 using inelastic neutron scattering at the direct time-of-flight disc chopper spectrometer IN5 at ILL and the newly developed frequency-domain Fourier-transform THz EPR at BESSY. Based on the experimental results a magnetic model has been developed. It is discussed why no SMM behavior was observed, even though Mn2La2 exhibits a remarkably high energy barrier of about 37 K for spin relaxation. Furthermore our results can be applied to analogous clusters, with the diamagnetic LaIII ions replaced by magnetic rare earth ions.

  9. Magnetic model for Mn{sub 2}La{sub 2} developed from spectroscopic studies with inelastic neutron scattering and frequency-domain Fourier-transform THz EPR

    Milazzo, R.; Nehrkorn, J.; Stuiber, S.; Waldmann, O. [Physikalisches Institut, Universitaet Freiburg (Germany); Akhtar, M.N.; Lan, Y.; Powell, A.K. [Institut fuer Anorganische Chemie, Universitaet Karlsruhe, KIT (Germany); Mutka, H. [Institut Laue Langevin, Grenoble (France); Dreiser, J. [Swiss Light Source, Paul Scherrer Institut (Switzerland); Schnegg, A. [Helmholtz-Zentrum Berlin, Institut fuer Silizium-Photovoltaik (Germany); Holldack, K. [Helmholtz-Zentrum Berlin, Institut fuer Synchrotonstrahlung (Germany)

    2011-07-01

    Molecular nanomagnets which contain several magnetic centers with a large single-ion magnetic anisotropy are of general interest, because they could lead to interesting phenomena such as single-molecule magnet (SMM) behavior. We performed spectroscopic experiments on Mn{sub 2}La{sub 2} using inelastic neutron scattering at the direct time-of-flight disc chopper spectrometer IN5 at ILL and the newly developed frequency-domain Fourier-transform THz EPR at BESSY. Based on the experimental results a magnetic model has been developed. It is discussed why no SMM behavior was observed, even though Mn{sub 2}La{sub 2} exhibits a remarkably high energy barrier of about 37 K for spin relaxation. Furthermore our results can be applied to analogous clusters, with the diamagnetic La{sup I}II ions replaced by magnetic rare earth ions.

  10. Three-dimensional Fourier-domain optical coherence tomography of alveolar mechanics in stepwise inflated and deflated isolated and perfused rabbit lungs

    Krueger, Alexander; Knels, Lilla; Meissner, Sven; Wendel, Martina; Heller, Axel R.; Lambeck, Thomas; Koch, Thea; Koch, Edmund

    2007-07-01

    Fourier domain optical coherence tomography (FD-OCT) was used to acquire three-dimensional image stacks of isolated and perfused rabbit lungs (n = 4) at different constant pulmonary airway pressures (CPAP) and during vascular fixation. After despeckling and applying a threshold, the images were segmented into air and tissue, and registered to each other to compensate for movement between CPAP steps. The air-filled cross-sectional areas were quantified using a semi-automatic algorithm. The cross-sectional area of alveolar structures taken at all three perpendicular planes increased with increasing CPAP. Between the minimal CPAP of 3 mbar and the maximum of 25 mbar the areas increased to about 140% of their initial value. There was no systematic dependency of inflation rate on initial size of the alveolar structure. During the perfusion fixation of the lungs with glutaraldehyde morphometric changes of the alveolar geometry measured with FD-OCT were negligible.

  11. Retinal polarization-sensitive optical coherence tomography at 1060 nm with 350 kHz A-scan rate using an Fourier domain mode locked laser

    Torzicky, Teresa; Marschall, Sebastian; Pircher, Michael;

    2013-01-01

    -dimensional data sets of healthy human volunteers show different polarization characteristics in the eye, such as depolarization in the retinal pigment epithelium and birefringence in retinal nerve fiber layer and sclera. The increased speed allows imaging of large volumes with reduced motion artifacts. Moreover......We present a novel, high-speed, polarization-sensitive, optical coherence tomography set-up for retinal imaging operating at a central wavelength of 1060 nm which was tested for in vivo imaging in healthy human volunteers. We use the system in combination with a Fourier domain mode locked laser......, averaging several two-dimensional frames allows the generation of high-definition B-scans without the use of an eye-tracking system. The increased penetration depth of the system, which is caused by the longer probing beam wavelength, is beneficial for imaging choroidal and scleral structures and allows...

  12. 3D Spectroscopic Instrumentation

    Bershady, Matthew A

    2009-01-01

    In this Chapter we review the challenges of, and opportunities for, 3D spectroscopy, and how these have lead to new and different approaches to sampling astronomical information. We describe and categorize existing instruments on 4m and 10m telescopes. Our primary focus is on grating-dispersed spectrographs. We discuss how to optimize dispersive elements, such as VPH gratings, to achieve adequate spectral resolution, high throughput, and efficient data packing to maximize spatial sampling for 3D spectroscopy. We review and compare the various coupling methods that make these spectrographs ``3D,'' including fibers, lenslets, slicers, and filtered multi-slits. We also describe Fabry-Perot and spatial-heterodyne interferometers, pointing out their advantages as field-widened systems relative to conventional, grating-dispersed spectrographs. We explore the parameter space all these instruments sample, highlighting regimes open for exploitation. Present instruments provide a foil for future development. We give an...

  13. 3D Projection Installations

    Halskov, Kim; Johansen, Stine Liv; Bach Mikkelsen, Michelle

    2014-01-01

    Three-dimensional projection installations are particular kinds of augmented spaces in which a digital 3-D model is projected onto a physical three-dimensional object, thereby fusing the digital content and the physical object. Based on interaction design research and media studies, this article...... contributes to the understanding of the distinctive characteristics of such a new medium, and identifies three strategies for designing 3-D projection installations: establishing space; interplay between the digital and the physical; and transformation of materiality. The principal empirical case, From...... Fingerplan to Loop City, is a 3-D projection installation presenting the history and future of city planning for the Copenhagen area in Denmark. The installation was presented as part of the 12th Architecture Biennale in Venice in 2010....

  14. 3D7-derived Plasmodium falciparum erythrocyte membrane protein 1 is a frequent target of naturally acquired antibodies recognizing protein domains in a particular pattern independent of malaria transmission intensity

    Joergensen, Louise; Vestergaard, Lasse S; Turner, Louise;

    2007-01-01

    Protection against Plasmodium falciparum malaria is largely mediated by IgG against surface Ags such as the erythrocyte membrane protein 1 family (PfEMP1) responsible for antigenic variation and sequestration of infected erythrocytes. PfEMP1 molecules can be divided into groups A, B/A, B, C, and B....../C. We have previously suggested that expression of groups A and B/A PfEMP1 is associated with severe disease and that Abs to these molecules are acquired earlier in life than Abs to PfEMP1 belonging to groups B, B/C, and C PfEMP1. In this study, we compared the acquisition of IgG to 20 rPfEMP1 domains...... derived from 3D7 in individuals living under markedly different malaria transmission intensity and were unable to find differences in the Ab acquisition rate to PfEMP1 of different groupings (A, B, or C) or domain type (alpha, beta, gamma, delta, epsilon, or x). Abs were acquired early in life in...

  15. Herramientas SIG 3D

    Francisco R. Feito Higueruela

    2010-04-01

    Full Text Available Applications of Geographical Information Systems on several Archeology fields have been increasing during the last years. Recent avances in these technologies make possible to work with more realistic 3D models. In this paper we introduce a new paradigm for this system, the GIS Thetrahedron, in which we define the fundamental elements of GIS, in order to provide a better understanding of their capabilities. At the same time the basic 3D characteristics of some comercial and open source software are described, as well as the application to some samples on archeological researchs

  16. Bootstrapping 3D fermions

    Iliesiu, Luca; Kos, Filip; Poland, David; Pufu, Silviu S.; Simmons-Duffin, David; Yacoby, Ran

    2016-03-01

    We study the conformal bootstrap for a 4-point function of fermions in 3D. We first introduce an embedding formalism for 3D spinors and compute the conformal blocks appearing in fermion 4-point functions. Using these results, we find general bounds on the dimensions of operators appearing in the ψ × ψ OPE, and also on the central charge C T . We observe features in our bounds that coincide with scaling dimensions in the GrossNeveu models at large N . We also speculate that other features could coincide with a fermionic CFT containing no relevant scalar operators.

  17. Interaktiv 3D design

    Villaume, René Domine; Ørstrup, Finn Rude

    2002-01-01

    Projektet undersøger potentialet for interaktiv 3D design via Internettet. Arkitekt Jørn Utzons projekt til Espansiva blev udviklet som et byggesystem med det mål, at kunne skabe mangfoldige planmuligheder og mangfoldige facade- og rumudformninger. Systemets bygningskomponenter er digitaliseret som...... 3D elementer og gjort tilgængelige. Via Internettet er det nu muligt at sammenstille og afprøve en uendelig  række bygningstyper som  systemet blev tænkt og udviklet til....

  18. 3D Dental Scanner

    Kotek, L.

    2015-01-01

    This paper is about 3D scan of plaster dental casts. The main aim of the work is a hardware and software proposition of 3D scan system for scanning of dental casts. There were used camera, projector and rotate table for this scanning system. Surface triangulation was used, taking benefits of projections of structured light on object, which is being scanned. The rotate table is controlled by PC. The camera, projector and rotate table are synchronized by PC. Controlling of stepper motor is prov...

  19. TOWARDS: 3D INTERNET

    Ms. Swapnali R. Ghadge

    2013-01-01

    In today’s ever-shifting media landscape, it can be a complex task to find effective ways to reach your desired audience. As traditional media such as television continue to lose audience share, one venue in particular stands out for its ability to attract highly motivated audiences and for its tremendous growth potential the 3D Internet. The concept of '3D Internet' has recently come into the spotlight in the R&D arena, catching the attention of many people, and leading to a lot o...

  20. 3-D electromagnetic induction studies using the Swarm constellation: Mapping conductivity anomalies in the Earth's mantle

    Kuvshinov, A.; Sabaka, T.; Olsen, Nils

    2006-01-01

    An approach is presented to detect deep-seated regional conductivity anomalies by analysis of magnetic observations taken by low-Earth-orbiting satellites. The approach deals with recovery of C-responses on a regular grid and starts with a determination of time series of external and internal...... validation of the approach, 3 years of realistic synthetic data at Simulated orbits of the forthcoming Swarm constellation of 3 satellites have been used. To obtain the synthetic data for a given 3-D conductivity Earth's model a time-domain scheme has been applied which relies oil a Fourier transformation of...... the inducing field, and oil a frequency domain forward modelling. The conductivity model consists of a thin Surface layer of realistic conductance and a 3-D mantle that incorporates a hypothetic deep regional anomaly beneath the Pacific Ocean plate. To establish the ability of the approach to capture...

  1. Investigation of pharmaceutical drugs and caffeine-containing foods using Fourier and terahertz time-domain spectroscopy

    KaraliÅ«nas, Mindaugas; Venckevičius, Rimvydas; Kašalynas, Irmantas; Puc, Uroš; Abina, Andreja; Jeglič, Anton; Zidanšek, Aleksander; Valušis, Gintaras

    2015-08-01

    Several pharmaceutical drugs, such as alprazolam, ibuprofen, acetaminophen, activated carbon and others, and caffeine-containing foods were tested using terahertz (THz) time domain spectroscopy in the range from 0.3 to 2 THz. The dry powder of pharmaceutical drugs was mixed with HDPE and pressed into the pellets using hydraulic press. The coffee grounds were also pressed into the pellets after ball-milling and mixing with HDPE. The caffeine containing liquid foods were dried out on the paper strips of various stacking. Experiments allow one to determine characteristic spectral signatures of the investigated substances within THz range caused by active pharmaceutical ingredients, like in the case of caffeine, as well as supporting pharmaceutical ingredients. Spectroscopic THz imaging approach is considered as a possible option to identify packaged pharmaceutical drugs. The caffeine spectral features in the tested caffeine containing foods are difficult to observed due to the low caffeine concentration and complex caffeine chemical surrounding.

  2. Tangible 3D Modelling

    Hejlesen, Aske K.; Ovesen, Nis

    2012-01-01

    This paper presents an experimental approach to teaching 3D modelling techniques in an Industrial Design programme. The approach includes the use of tangible free form models as tools for improving the overall learning. The paper is based on lecturer and student experiences obtained through...

  3. Shaping 3-D boxes

    Stenholt, Rasmus; Madsen, Claus B.

    2011-01-01

    Enabling users to shape 3-D boxes in immersive virtual environments is a non-trivial problem. In this paper, a new family of techniques for creating rectangular boxes of arbitrary position, orientation, and size is presented and evaluated. These new techniques are based solely on position data...

  4. 3D Harmonic Echocardiography:

    M.M. Voormolen

    2007-01-01

    textabstractThree dimensional (3D) echocardiography has recently developed from an experimental technique in the ’90 towards an imaging modality for the daily clinical practice. This dissertation describes the considerations, implementation, validation and clinical application of a unique

  5. Comparison of retinal thickness by Fourier-domain optical coherence tomography and OCT retinal image analysis software segmentation analysis derived from Stratus optical coherence tomography images

    Tátrai, Erika; Ranganathan, Sudarshan; Ferencz, Mária; Debuc, Delia Cabrera; Somfai, Gábor Márk

    2011-05-01

    Purpose: To compare thickness measurements between Fourier-domain optical coherence tomography (FD-OCT) and time-domain OCT images analyzed with a custom-built OCT retinal image analysis software (OCTRIMA). Methods: Macular mapping (MM) by StratusOCT and MM5 and MM6 scanning protocols by an RTVue-100 FD-OCT device are performed on 11 subjects with no retinal pathology. Retinal thickness (RT) and the thickness of the ganglion cell complex (GCC) obtained with the MM6 protocol are compared for each early treatment diabetic retinopathy study (ETDRS)-like region with corresponding results obtained with OCTRIMA. RT results are compared by analysis of variance with Dunnett post hoc test, while GCC results are compared by paired t-test. Results: A high correlation is obtained for the RT between OCTRIMA and MM5 and MM6 protocols. In all regions, the StratusOCT provide the lowest RT values (mean difference 43 +/- 8 μm compared to OCTRIMA, and 42 +/- 14 μm compared to RTVue MM6). All RTVue GCC measurements were significantly thicker (mean difference between 6 and 12 μm) than the GCC measurements of OCTRIMA. Conclusion: High correspondence of RT measurements is obtained not only for RT but also for the segmentation of intraretinal layers between FD-OCT and StratusOCT-derived OCTRIMA analysis. However, a correction factor is required to compensate for OCT-specific differences to make measurements more comparable to any available OCT device.

  6. Fourier series

    Tolstov, Georgi P

    1962-01-01

    Richard A. Silverman's series of translations of outstanding Russian textbooks and monographs is well-known to people in the fields of mathematics, physics, and engineering. The present book is another excellent text from this series, a valuable addition to the English-language literature on Fourier series.This edition is organized into nine well-defined chapters: Trigonometric Fourier Series, Orthogonal Systems, Convergence of Trigonometric Fourier Series, Trigonometric Series with Decreasing Coefficients, Operations on Fourier Series, Summation of Trigonometric Fourier Series, Double Fourie

  7. 3D animace

    Klusoň, Jindřich

    2010-01-01

    Computer animation has a growing importance and application in the world. With expansion of technologies increases quality of the final animation as well as number of 3D animation software. This thesis is currently mapped animation software for creating animation in film, television industry and video games which are advisable users requirements. Of them were selected according to criteria the best - Autodesk Maya 2011. This animation software is unique with tools for creating special effects...

  8. Coseismic slip distribution of the 2015 Mw7.8 Gorkha, Nepal, earthquake from joint inversion of GPS and InSAR data for slip within a 3-D heterogeneous Domain

    Tung, Sui; Masterlark, Timothy

    2016-05-01

    We derive a coseismic slip model of the 2015 Mw7.8 Gorkha earthquake on the basis of GPS and line-of-sight displacements from ALOS-2 descending interferograms, using Green's functions calculated with a 3-D finite element model (FEM). The FEM simulates a nonuniform distribution of elastic material properties and a precise geometric configuration of the irregular topographical surface. The rupturing fault is modeled as a low-angle and north dipping surface within the Main Frontal Thrust along the convergent margin of the Himalayas. The optimal model that inherits heterogeneous material properties provides a significantly better solution than that in a homogenous domain at the 95% confidence interval. The best fit solution for the domain having a nonuniform distribution of material properties reveals a rhombus-shaped slip zone of three composite asperities. Slip is primarily concentrated at a depth of 15 km with both dip-slip (maximum 6.54 m) and strike-slip (maximum 2.0 m) components, giving rise to a geodetic-based moment of 1.09 × 1021 Nm in general agreement with the seismological estimate. The optimal relative weights among GPS and interferometric synthetic aperture radar (InSAR) are deduced from a new method, MC-HVCE which combines a Monte Carlo search and a Helmert Method of Variance Components Estimation. This method determines the relative weights in a systemic approach which preserves the intrinsic solution smoothness. The joint solution is significantly better than those inverted from each individual data set. This methodology allows us to integrate multiple data sets of geodetic observations with seismic tomography, in an effort to achieve a better understanding of seismic ruptures within crustal heterogeneity.

  9. Massive 3D Supergravity

    Andringa, Roel; de Roo, Mees; Hohm, Olaf; Sezgin, Ergin; Townsend, Paul K

    2009-01-01

    We construct the N=1 three-dimensional supergravity theory with cosmological, Einstein-Hilbert, Lorentz Chern-Simons, and general curvature squared terms. We determine the general supersymmetric configuration, and find a family of supersymmetric adS vacua with the supersymmetric Minkowski vacuum as a limiting case. Linearizing about the Minkowski vacuum, we find three classes of unitary theories; one is the supersymmetric extension of the recently discovered `massive 3D gravity'. Another is a `new topologically massive supergravity' (with no Einstein-Hilbert term) that propagates a single (2,3/2) helicity supermultiplet.

  10. Massive 3D supergravity

    Andringa, Roel; Bergshoeff, Eric A; De Roo, Mees; Hohm, Olaf [Centre for Theoretical Physics, University of Groningen, Nijenborgh 4, 9747 AG Groningen (Netherlands); Sezgin, Ergin [George and Cynthia Woods Mitchell Institute for Fundamental Physics and Astronomy, Texas A and M University, College Station, TX 77843 (United States); Townsend, Paul K, E-mail: E.A.Bergshoeff@rug.n, E-mail: O.Hohm@rug.n, E-mail: sezgin@tamu.ed, E-mail: P.K.Townsend@damtp.cam.ac.u [Department of Applied Mathematics and Theoretical Physics, Centre for Mathematical Sciences, University of Cambridge, Wilberforce Road, Cambridge, CB3 0WA (United Kingdom)

    2010-01-21

    We construct the N=1 three-dimensional supergravity theory with cosmological, Einstein-Hilbert, Lorentz Chern-Simons, and general curvature squared terms. We determine the general supersymmetric configuration, and find a family of supersymmetric adS vacua with the supersymmetric Minkowski vacuum as a limiting case. Linearizing about the Minkowski vacuum, we find three classes of unitary theories; one is the supersymmetric extension of the recently discovered 'massive 3D gravity'. Another is a 'new topologically massive supergravity' (with no Einstein-Hilbert term) that propagates a single (2,3/2) helicity supermultiplet.

  11. TOWARDS: 3D INTERNET

    Ms. Swapnali R. Ghadge

    2013-08-01

    Full Text Available In today’s ever-shifting media landscape, it can be a complex task to find effective ways to reach your desired audience. As traditional media such as television continue to lose audience share, one venue in particular stands out for its ability to attract highly motivated audiences and for its tremendous growth potential the 3D Internet. The concept of '3D Internet' has recently come into the spotlight in the R&D arena, catching the attention of many people, and leading to a lot of discussions. Basically, one can look into this matter from a few different perspectives: visualization and representation of information, and creation and transportation of information, among others. All of them still constitute research challenges, as no products or services are yet available or foreseen for the near future. Nevertheless, one can try to envisage the directions that can be taken towards achieving this goal. People who take part in virtual worlds stay online longer with a heightened level of interest. To take advantage of that interest, diverse businesses and organizations have claimed an early stake in this fast-growing market. They include technology leaders such as IBM, Microsoft, and Cisco, companies such as BMW, Toyota, Circuit City, Coca Cola, and Calvin Klein, and scores of universities, including Harvard, Stanford and Penn State.

  12. Real-time display with large field of view on fourier domain optical coherence tomography at 1310 nm wavelength for dermatology

    Xiao, Qing; Hou, Jue; Fu, Ling

    2012-06-01

    A Fourier domain optical coherence tomography (OCT) system with 1310 nm light was demonstrated to study inflammatory human skin and the skin coated with a moisturizer in vivo. By using a graphics processing unit (GPU), the display rate could reach 20 frames/s with 1000 A-scans contained in one image. The field of view (FOV) of the cross-sectional image is 7 mm in the lateral direction and the penetration depth is ˜1 mm in skin. The result shows that, in inflammatory skin, the epidermis became thicker and had a decreased scattering; furthermore, the region of the severe lesion present an uneven thickness of the epidermis compared with the peripheral area. For the result of a finger tip coated with the moisturizer, the antireflection effect was significant and the stratum corneum became more transparent. In this letter, we demonstrated that real-time display with a large FOV could enable screening of a large tissue area; thereby increasing the dermatologic diagnostic potential of the method by permitting a comparison of the lesion and the normal peripheral region.

  13. Measurements of multiple gas parameters in a pulsed-detonation combustor using time-division-multiplexed Fourier-domain mode-locked lasers.

    Caswell, Andrew W; Roy, Sukesh; An, Xinliang; Sanders, Scott T; Schauer, Frederick R; Gord, James R

    2013-04-20

    Hyperspectral absorption spectroscopy is being used to monitor gas temperature, velocity, pressure, and H(2)O mole fraction in a research-grade pulsed-detonation combustor (PDC) at the Air Force Research Laboratory. The hyperspectral source employed is termed the TDM 3-FDML because it consists of three time-division-multiplexed (TDM) Fourier-domain mode-locked (FDML) lasers. This optical-fiber-based source monitors sufficient spectral information in the H(2)O absorption spectrum near 1350 nm to permit measurements over the wide range of conditions encountered throughout the PDC cycle. Doppler velocimetry based on absorption features is accomplished using a counterpropagating beam approach that is designed to minimize common-mode flow noise. The PDC in this study is operated in two configurations: one in which the combustion tube exhausts directly to the ambient environment and another in which it feeds an automotive-style turbocharger to assess the performance of a detonation-driven turbine. Because the enthalpy flow [kilojoule/second] is important in assessing the performance of the PDC in various configurations, it is calculated from the measured gas properties. PMID:23669701

  14. Curating Architectural 3D CAD Models

    MacKenzie Smith

    2009-06-01

    Full Text Available Normal 0 Increasing demand to manage and preserve 3-dimensional models for a variety of physical phenomena (e.g., building and engineering designs, computer games, or scientific visualizations is creating new challenges for digital archives. Preserving 3D models requires identifying technical formats for the models that can be maintained over time, and the available formats offer different advantages and disadvantages depending on the intended future uses of the models. Additionally, the metadata required to manage 3D models is not yet standardized, and getting intellectual proposal rights for digital models is uncharted territory.  The FACADE Project at MIT is investigating these challenges in the architecture, engineering and construction (AEC industry and has developed recommendations and systems to support digital archives in dealing with digital 3D models and related data. These results can also be generalized to other domains doing 3D modeling.

  15. Regularisation of 3D Signed Distance Fields

    Paulsen, Rasmus Reinhold; Bærentzen, Jakob Andreas; Larsen, Rasmus

    2009-01-01

    Signed 3D distance fields are used a in a variety of domains. From shape modelling to surface registration. They are typically computed based on sampled point sets. If the input point set contains holes, the behaviour of the zero-level surface of the distance field is not well defined. In this...

  16. Biocompatible 3D Matrix with Antimicrobial Properties

    Alberto Ion

    2016-01-01

    Full Text Available The aim of this study was to develop, characterize and assess the biological activity of a new regenerative 3D matrix with antimicrobial properties, based on collagen (COLL, hydroxyapatite (HAp, β-cyclodextrin (β-CD and usnic acid (UA. The prepared 3D matrix was characterized by Scanning Electron Microscopy (SEM, Fourier Transform Infrared Microscopy (FT-IRM, Transmission Electron Microscopy (TEM, and X-ray Diffraction (XRD. In vitro qualitative and quantitative analyses performed on cultured diploid cells demonstrated that the 3D matrix is biocompatible, allowing the normal development and growth of MG-63 osteoblast-like cells and exhibited an antimicrobial effect, especially on the Staphylococcus aureus strain, explained by the particular higher inhibitory activity of usnic acid (UA against Gram positive bacterial strains. Our data strongly recommend the obtained 3D matrix to be used as a successful alternative for the fabrication of three dimensional (3D anti-infective regeneration matrix for bone tissue engineering.

  17. 3D printing for dummies

    Hausman, Kalani Kirk

    2014-01-01

    Get started printing out 3D objects quickly and inexpensively! 3D printing is no longer just a figment of your imagination. This remarkable technology is coming to the masses with the growing availability of 3D printers. 3D printers create 3-dimensional layered models and they allow users to create prototypes that use multiple materials and colors.  This friendly-but-straightforward guide examines each type of 3D printing technology available today and gives artists, entrepreneurs, engineers, and hobbyists insight into the amazing things 3D printing has to offer. You'll discover methods for

  18. Superconformal index and 3d-3d correspondence for mapping cylinder/torus

    We probe the 3d-3d correspondence for mapping cylinder/torus using the superconformal index. We focus on the case when the fiber is a once-punctured torus (Σ1,1). The corresponding 3d field theories can be realized using duality domain wall theories in 4d N=2∗ theory. We show that the superconformal indices of the 3d theories are the SL(2,ℂ) Chern-Simons partition function on the mapping cylinder/torus. For the mapping torus, we also consider another realization of the corresponding 3d theory associated with ideal triangulation. The equality between the indices from the two descriptions for the mapping torus theory is reduced to a simple basis change of the Hilbert space for the SL(2,ℂ) Chern-Simons theory on ℝ×Σ1,1

  19. 3D monitor

    Szkandera, Jan

    2009-01-01

    Tato bakalářská práce se zabývá návrhem a realizací systému, který umožní obraz scény zobrazovaný na ploše vnímat prostorově. Prostorové vnímání 2D obrazové informace je umožněno jednak stereopromítáním a jednak tím, že se obraz mění v závislosti na poloze pozorovatele. Tato práce se zabývá hlavně druhým z těchto problémů. This Bachelor's thesis goal is to design and realize system, which allows user to perceive 2D visual information as three-dimensional. 3D visual preception of 2D image i...

  20. Mobile 3D tomograph

    Mobile tomographs often have the problem that high spatial resolution is impossible owing to the position or setup of the tomograph. While the tree tomograph developed by Messrs. Isotopenforschung Dr. Sauerwein GmbH worked well in practice, it is no longer used as the spatial resolution and measuring time are insufficient for many modern applications. The paper shows that the mechanical base of the method is sufficient for 3D CT measurements with modern detectors and X-ray tubes. CT measurements with very good statistics take less than 10 min. This means that mobile systems can be used, e.g. in examinations of non-transportable cultural objects or monuments. Enhancement of the spatial resolution of mobile tomographs capable of measuring in any position is made difficult by the fact that the tomograph has moving parts and will therefore have weight shifts. With the aid of tomographies whose spatial resolution is far higher than the mechanical accuracy, a correction method is presented for direct integration of the Feldkamp algorithm

  1. Ganglion cell complex and retinal nerve fiber layer measured by fourier-domain optical coherence tomography for early detection of structural damage in patients with preperimetric glaucoma

    Rolle T

    2011-07-01

    Full Text Available Teresa Rolle, Cristina Briamonte, Daniela Curto, Federico Maria GrignoloEye Clinic, Section of Ophthalmology, Department of Clinical Physiopathology, University of Torino, Torino, ItalyAims: To evaluate the capability of Fourier-domain optical coherence tomography (FD-OCT to detect structural damage in patients with preperimetric glaucoma.Methods: A total of 178 Caucasian subjects were enrolled in this cohort study: 116 preperimetric glaucoma patients and 52 healthy subjects. Using three-dimensional FD-OCT, the participants underwent imaging of the ganglion cell complex (GCC and the optic nerve head. Sensitivity, specificity, likelihood ratios, and predictive values were calculated for all parameters at the first and fifth percentiles. Areas under the curves (AUCs were generated for all parameters and were compared (Delong test. For both the GCC and the optic nerve head protocols, the OR logical disjunction (Boolean logic operator was calculated.Results: The AUCs didn’t significantly differ. Macular global loss volume had the largest AUC (0.81. Specificities were high at both the fifth and first percentiles (up to 97%, but sensitivities were low, especially at the first percentile (55%–27%.Conclusion: Macular and papillary diagnostic accuracies did not differ significantly based on the 95% confidence interval. The computation of the Boolean OR operator has been found to boost diagnostic accuracy. Using the software-provided classification, sensitivity and diagnostic accuracy were low for both the retinal nerve fiber layer and the GCC scans. FD-OCT does not seem to be decisive for early detection of structural damage in patients with no functional impairment. This suggests that there is a need for analysis software to be further refined to enhance glaucoma diagnostic capability.Keywords: OCT, RNFL, GCC, diagnostic accuracy 

  2. Detection of photoreceptor disruption by adaptive optics fundus imaging and Fourier-domain optical coherence tomography in eyes with occult macular dystrophy

    Tatsuo Yamaguchi

    2011-03-01

    Full Text Available Yoshiyuki Kitaguchi1, Shunji Kusaka1, Tatsuo Yamaguchi2, Toshifumi Mihashi2, Takashi Fujikado11Department of Applied Visual Science, Osaka University Graduate School of Medicine, Osaka, Japan; 2Topcon Research Institute, Itabashi, JapanPurpose: To investigate the structural changes in the photoreceptors by adaptive optics (AO fundus imaging and Fourier-domain optical coherence tomography (FD-OCT in eyes with occult macular dystrophy (OMD.Design: Observational case reports.Methods: Eight eyes of four patients who were diagnosed with OMD were examined. All eyes had a complete ophthalmological examination. Multifocal electroretinograms (mfERGs were recorded from all eyes. AO and FD-OCT images of foveal photoreceptors were obtained.Results: The best-corrected visual acuity (BCVA of these eyes ranged from 20/20 to 20/200, and the ocular fundus was normal by conventional ocular examination in all eyes. The amplitudes of the mfERGs were decreased in the foveal area. The inner and outer segment (IS/OS junction of the photoreceptors in the foveal area was disrupted. The IS/OS junction was intact in one eye with a BCVA of 20/20, and the outer segment layer between the IS/OS junction and retinal pigment epithelium of the FD-OCT images was identified only in the center of the fovea. The AO images showed patchy dark areas in all eyes, which indicated a disruption of the mosaic of bright spots in the fovea.Conclusion: Structural changes of photoreceptors in OMD patients were detected tangentially by FD-OCT and en face by AO.Keywords: Photoreceptors, OMD, images, retinal imaging

  3. X3D: Extensible 3D Graphics Standard

    Daly, Leonard; Brutzman, Don

    2007-01-01

    The article of record as published may be located at http://dx.doi.org/10.1109/MSP.2007.905889 Extensible 3D (X3D) is the open standard for Web-delivered three-dimensional (3D) graphics. It specifies a declarative geometry definition language, a run-time engine, and an application program interface (API) that provide an interactive, animated, real-time environment for 3D graphics. The X3D specification documents are freely available, the standard can be used without paying any royalties,...

  4. 3D game environments create professional 3D game worlds

    Ahearn, Luke

    2008-01-01

    The ultimate resource to help you create triple-A quality art for a variety of game worlds; 3D Game Environments offers detailed tutorials on creating 3D models, applying 2D art to 3D models, and clear concise advice on issues of efficiency and optimization for a 3D game engine. Using Photoshop and 3ds Max as his primary tools, Luke Ahearn explains how to create realistic textures from photo source and uses a variety of techniques to portray dynamic and believable game worlds.From a modern city to a steamy jungle, learn about the planning and technological considerations for 3D modelin

  5. 3D Printing an Octohedron

    Aboufadel, Edward F.

    2014-01-01

    The purpose of this short paper is to describe a project to manufacture a regular octohedron on a 3D printer. We assume that the reader is familiar with the basics of 3D printing. In the project, we use fundamental ideas to calculate the vertices and faces of an octohedron. Then, we utilize the OPENSCAD program to create a virtual 3D model and an STereoLithography (.stl) file that can be used by a 3D printer.

  6. A Bayesian approach for suppression of limited angular sampling artifacts in single particle 3D reconstruction.

    Moriya, Toshio; Acar, Erman; Cheng, R Holland; Ruotsalainen, Ulla

    2015-09-01

    In the single particle reconstruction, the initial 3D structure often suffers from the limited angular sampling artifact. Selecting 2D class averages of particle images generally improves the accuracy and efficiency of the reference-free 3D angle estimation, but causes an insufficient angular sampling to fill the information of the target object in the 3D frequency space. Similarly, the initial 3D structure by the random-conical tilt reconstruction has the well-known "missing cone" artifact. Here, we attempted to solve the limited angular sampling problem by sequentially applying maximum a posteriori estimate with expectation maximization algorithm (sMAP-EM). Using both simulated and experimental cryo-electron microscope images, the sMAP-EM was compared to the direct Fourier method on the basis of reconstruction error and resolution. To establish selection criteria of the final regularization weight for the sMAP-EM, the effects of noise level and sampling sparseness on the reconstructions were examined with evenly distributed sampling simulations. The frequency information filled in the missing cone of the conical tilt sampling simulations was assessed by developing new quantitative measurements. All the results of visual and numerical evaluations showed the sMAP-EM performed better than the direct Fourier method, regardless of the sampling method, noise level, and sampling sparseness. Furthermore, the frequency domain analysis demonstrated that the sMAP-EM can fill the meaningful information in the unmeasured angular space without detailed a priori knowledge of the objects. The current research demonstrated that the sMAP-EM has a high potential to facilitate the determination of 3D protein structures at near atomic-resolution. PMID:26193484

  7. 3D modelling and recognition

    Rodrigues, Marcos; Robinson, Alan; Alboul, Lyuba; Brink, Willie

    2006-01-01

    3D face recognition is an open field. In this paper we present a method for 3D facial recognition based on Principal Components Analysis. The method uses a relatively large number of facial measurements and ratios and yields reliable recognition. We also highlight our approach to sensor development for fast 3D model acquisition and automatic facial feature extraction.

  8. 3-D contextual Bayesian classifiers

    Larsen, Rasmus

    distribution for the pixel values as well as a prior distribution for the configuration of class variables within the cross that is made of a pixel and its four nearest neighbours. We will extend these algorithms to 3-D, i.e. we will specify a simultaneous Gaussian distribution for a pixel and its 6 nearest 3......-D neighbours, and generalise the class variable configuration distributions within the 3-D cross given in 2-D algorithms. The new 3-D algorithms are tested on a synthetic 3-D multivariate dataset....

  9. Taming Supersymmetric Defects in 3d-3d Correspondence

    Gang, Dongmin; Romo, Mauricio; Yamazaki, Masahito

    2015-01-01

    We study knots in 3d Chern-Simons theory with complex gauge group $SL(N,\\mathbb{C})$, in the context of its relation with 3d $\\mathcal{N}=2$ theory (the so-called 3d-3d correspondence). The defect has either co-dimension 2 or co-dimension 4 inside the 6d $(2,0)$ theory, which is compactified on a 3-manifold $\\hat{M}$. We identify such defects in various corners of the 3d-3d correspondence, namely in 3d $SL(N,\\mathbb{C})$ Chern-Simons theory, in 3d $\\mathcal{N}=2$ theory, in 5d $\\mathcal{N}=2$ super Yang-Mills theory, and in the M-theory holographic dual. We can make quantitative checks of the 3d-3d correspondence by computing partition functions at each of these theories. This Letter is a companion to a longer paper, which contains more details and more results.

  10. 3D face analysis for demographic biometrics

    Tokola, Ryan A [ORNL; Mikkilineni, Aravind K [ORNL; Boehnen, Chris Bensing [ORNL

    2015-01-01

    Despite being increasingly easy to acquire, 3D data is rarely used for face-based biometrics applications beyond identification. Recent work in image-based demographic biometrics has enjoyed much success, but these approaches suffer from the well-known limitations of 2D representations, particularly variations in illumination, texture, and pose, as well as a fundamental inability to describe 3D shape. This paper shows that simple 3D shape features in a face-based coordinate system are capable of representing many biometric attributes without problem-specific models or specialized domain knowledge. The same feature vector achieves impressive results for problems as diverse as age estimation, gender classification, and race classification.

  11. Assessing the Value of 3D Reconstruction in Building Construction

    Murthy, Uma; Boardman, David; Garg, Chirag

    2012-01-01

    3-dimensional (3D) reconstruction is an emerging field in image processing and computer vision that aims to create 3D visualizations/ models of objects/ scenes from image sets. However, its commercial applications and benefits are yet to be fully explored. In this paper, we describe ongoing work towards assessing the value of 3D reconstruction in the building construction domain. We present preliminary results from a user study, where our objective is to understand the use of visual informati...

  12. CTNNA3 and SEMA3D

    McGeachie, Michael J; Wu, Ann C; Tse, Sze Man;

    2015-01-01

    (cadherin-associated protein), alpha 3 (CTNNA3), reached genome-wide significance (rs7915695, P = 2.19 × 10(-8); mean exacerbations, 6.05 for minor alleles vs 3.71 for homozygous major alleles). Among the 4 top single nucleotide polymorphisms replicated in BioVU, rs993312 in Sema domain, immunoglobulin...... domain (Ig), short basic domain, secreted, (semaphorin) 3D (SEMA3D) was significant (P = .0083) and displayed stronger association among African Americans (P = .0004 in BioVU [mean exacerbations, 3.91 vs 1.53]; P = .0089 in the Childhood Asthma Management Program [mean exacerbations, 6.0 vs 3.25]). CTNNA......3 variants did not replicate in BioVU. A regulatory variant in the CTNNA3 locus was associated with CTNNA3 mRNA expression in CD4(+) cells from asthmatic patients (P = .00079). CTNNA3 appears to be active in the immune response, and SEMA3D has a plausible role in airway remodeling. We also provide a...

  13. 3D Printing Functional Nanocomposites

    Leong, Yew Juan

    2016-01-01

    3D printing presents the ability of rapid prototyping and rapid manufacturing. Techniques such as stereolithography (SLA) and fused deposition molding (FDM) have been developed and utilized since the inception of 3D printing. In such techniques, polymers represent the most commonly used material for 3D printing due to material properties such as thermo plasticity as well as its ability to be polymerized from monomers. Polymer nanocomposites are polymers with nanomaterials composited into the ...

  14. 3D Elevation Program—Virtual USA in 3D

    Lukas, Vicki; Stoker, J.M.

    2016-01-01

    The U.S. Geological Survey (USGS) 3D Elevation Program (3DEP) uses a laser system called ‘lidar’ (light detection and ranging) to create a virtual reality map of the Nation that is very accurate. 3D maps have many uses with new uses being discovered all the time.  

  15. 3D IBFV : Hardware-Accelerated 3D Flow Visualization

    Telea, Alexandru; Wijk, Jarke J. van

    2003-01-01

    We present a hardware-accelerated method for visualizing 3D flow fields. The method is based on insertion, advection, and decay of dye. To this aim, we extend the texture-based IBFV technique for 2D flow visualization in two main directions. First, we decompose the 3D flow visualization problem in a

  16. 3D for Graphic Designers

    Connell, Ellery

    2011-01-01

    Helping graphic designers expand their 2D skills into the 3D space The trend in graphic design is towards 3D, with the demand for motion graphics, animation, photorealism, and interactivity rapidly increasing. And with the meteoric rise of iPads, smartphones, and other interactive devices, the design landscape is changing faster than ever.2D digital artists who need a quick and efficient way to join this brave new world will want 3D for Graphic Designers. Readers get hands-on basic training in working in the 3D space, including product design, industrial design and visualization, modeling, ani

  17. A 3-D Contextual Classifier

    Larsen, Rasmus

    1997-01-01

    . This includes the specification of a Gaussian distribution for the pixel values as well as a prior distribution for the configuration of class variables within the cross that is m ade of a pixel and its four nearest neighbours. We will extend this algorithm to 3-D, i.e. we will specify a simultaneous Gaussian...... distr ibution for a pixel and its 6 nearest 3-D neighbours, and generalise the class variable configuration distribution within the 3-D cross. The algorithm is tested on a synthetic 3-D multivariate dataset....

  18. 3D Bayesian contextual classifiers

    Larsen, Rasmus

    2000-01-01

    We extend a series of multivariate Bayesian 2-D contextual classifiers to 3-D by specifying a simultaneous Gaussian distribution for the feature vectors as well as a prior distribution of the class variables of a pixel and its 6 nearest 3-D neighbours.......We extend a series of multivariate Bayesian 2-D contextual classifiers to 3-D by specifying a simultaneous Gaussian distribution for the feature vectors as well as a prior distribution of the class variables of a pixel and its 6 nearest 3-D neighbours....

  19. Interactive 3D multimedia content

    Cellary, Wojciech

    2012-01-01

    The book describes recent research results in the areas of modelling, creation, management and presentation of interactive 3D multimedia content. The book describes the current state of the art in the field and identifies the most important research and design issues. Consecutive chapters address these issues. These are: database modelling of 3D content, security in 3D environments, describing interactivity of content, searching content, visualization of search results, modelling mixed reality content, and efficient creation of interactive 3D content. Each chapter is illustrated with example a

  20. 3-D printers for libraries

    Griffey, Jason

    2014-01-01

    As the maker movement continues to grow and 3-D printers become more affordable, an expanding group of hobbyists is keen to explore this new technology. In the time-honored tradition of introducing new technologies, many libraries are considering purchasing a 3-D printer. Jason Griffey, an early enthusiast of 3-D printing, has researched the marketplace and seen several systems first hand at the Consumer Electronics Show. In this report he introduces readers to the 3-D printing marketplace, covering such topics asHow fused deposition modeling (FDM) printing workBasic terminology such as build

  1. 3D strata objectsregistration for Malaysia within the LADM framework

    Zulkifli, N.A.; Abdul Rahman, A.; Van Oosterom, P.J.M.

    2011-01-01

    This paper discusses 3D objects registration and modelling for cadastral objects within the Land Administration Domain Model (LADM) framework. A conceptual model as well as the associated technical model for the 2D and 3D objects have been proposed and developed for Malaysia. For both private and pu

  2. Application of the SDD-CMFD acceleration method to parallel 3-D MOC transport

    In this paper the spatial domain decomposed coarse mesh finite difference (SDD-CMFD) method is applied as an acceleration technique to a parallel implementation of the 3-D method of characteristics (MOC) for a series of problems to assess the effectiveness of the method for practical applications. The SDD-CMFD method assumes the problem domain is divided into independent parallelizable sweep regions globally linked within the framework of a CMFD-like system. Results obtained with the MPACT code are examined for three problems. The first analysis is of multi-dimensional, 1-group, infinite homogeneous media problems that compare the numerically-measured rate of convergence to that predicted by the 1-D Fourier analysis performed in previous work. It is observed that the rate of convergence of the numerical experiments has similar behavior to that predicted by the Fourier analysis for variations of optical thickness in the coarse cell and spatial subdomain. However, the rate of convergence is measured to be slightly less than that predicted by Fourier analysis. The algorithm is applied to the Takeda 3-D neutron transport benchmark, and compared to a standard source iteration. In the analysis of this problem, the method is observed to speed up convergence, significantly reducing the number of outer iterations by a factor of nearly 20x and reducing the overall run time by a factor of about 10x. Finally, the method is applied to a realistic PWR assembly, which is observed to converge in 7 outer iterations, a factor of 150x less than source iteration, using the SDD-CMFD acceleration method, and have an estimated speedup of ∼34x over conventional source iteration. (author)

  3. ICER-3D Hyperspectral Image Compression Software

    Xie, Hua; Kiely, Aaron; Klimesh, matthew; Aranki, Nazeeh

    2010-01-01

    Software has been developed to implement the ICER-3D algorithm. ICER-3D effects progressive, three-dimensional (3D), wavelet-based compression of hyperspectral images. If a compressed data stream is truncated, the progressive nature of the algorithm enables reconstruction of hyperspectral data at fidelity commensurate with the given data volume. The ICER-3D software is capable of providing either lossless or lossy compression, and incorporates an error-containment scheme to limit the effects of data loss during transmission. The compression algorithm, which was derived from the ICER image compression algorithm, includes wavelet-transform, context-modeling, and entropy coding subalgorithms. The 3D wavelet decomposition structure used by ICER-3D exploits correlations in all three dimensions of sets of hyperspectral image data, while facilitating elimination of spectral ringing artifacts, using a technique summarized in "Improving 3D Wavelet-Based Compression of Spectral Images" (NPO-41381), NASA Tech Briefs, Vol. 33, No. 3 (March 2009), page 7a. Correlation is further exploited by a context-modeling subalgorithm, which exploits spectral dependencies in the wavelet-transformed hyperspectral data, using an algorithm that is summarized in "Context Modeler for Wavelet Compression of Hyperspectral Images" (NPO-43239), which follows this article. An important feature of ICER-3D is a scheme for limiting the adverse effects of loss of data during transmission. In this scheme, as in the similar scheme used by ICER, the spatial-frequency domain is partitioned into rectangular error-containment regions. In ICER-3D, the partitions extend through all the wavelength bands. The data in each partition are compressed independently of those in the other partitions, so that loss or corruption of data from any partition does not affect the other partitions. Furthermore, because compression is progressive within each partition, when data are lost, any data from that partition received

  4. Improvement of 3D Scanner

    2003-01-01

    The disadvantage remaining in 3D scanning system and its reasons are discussed. A new host-and-slave structure with high speed image acquisition and processing system is proposed to quicken the image processing and improve the performance of 3D scanning system.

  5. 3D Printing for Bricks

    ECT Team, Purdue

    2015-01-01

    Building Bytes, by Brian Peters, is a project that uses desktop 3D printers to print bricks for architecture. Instead of using an expensive custom-made printer, it uses a normal standard 3D printer which is available for everyone and makes it more accessible and also easier for fabrication.

  6. Design and development of a 3D cadastral prototype based on the LADM and 3D topology

    Ying, S.; Guo, R.; Li, L.; Van Oosterom, P.J.M.; Ledoux, H.; Stoter, J.E.

    2011-01-01

    In this paper the design and development of a prototype 3D Cadastral system will be presented. The key aspects of this system are that the model is based on Land Administration Domain Model (LADM) and that the spatial profile is based on a full 3D topological structure. The prototype development sta

  7. Using 3D in Visualization

    Wood, Jo; Kirschenbauer, Sabine; Döllner, Jürgen;

    2005-01-01

    The notion of three-dimensionality is applied to five stages of the visualization pipeline. While 3D visulization is most often associated with the visual mapping and representation of data, this chapter also identifies its role in the management and assembly of data, and in the media used...... to display 3D imagery. The extra cartographic degree of freedom offered by using 3D is explored and offered as a motivation for employing 3D in visualization. The use of VR and the construction of virtual environments exploit navigational and behavioral realism, but become most usefil when combined...... with abstracted representations embedded in a 3D space. The interactions between development of geovisualization, the technology used to implement it and the theory surrounding cartographic representation are explored. The dominance of computing technologies, driven particularly by the gaming industry...

  8. 3-D electromagnetic plasma particle simulations on the Intel Delta parallel computer

    A three-dimensional electromagnetic PIC code has been developed on the 512 node Intel Touchstone Delta MIMD parallel computer. This code is based on the General Concurrent PIC algorithm which uses a domain decomposition to divide the computation among the processors. The 3D simulation domain can be partitioned into 1-, 2-, or 3-dimensional sub-domains. Particles must be exchanged between processors as they move among the subdomains. The Intel Delta allows one to use this code for very-large-scale simulations (i.e. over 108 particles and 106 grid cells). The parallel efficiency of this code is measured, and the overall code performance on the Delta is compared with that on Cray supercomputers. It is shown that their code runs with a high parallel efficiency of ≥ 95% for large size problems. The particle push time achieved is 115 nsecs/particle/time step for 162 million particles on 512 nodes. Comparing with the performance on a single processor Cray C90, this represents a factor of 58 speedup. The code uses a finite-difference leap frog method for field solve which is significantly more efficient than fast fourier transforms on parallel computers. The performance of this code on the 128 node Cray T3D will also be discussed

  9. PLOT3D/AMES, APOLLO UNIX VERSION USING GMR3D (WITHOUT TURB3D)

    Buning, P.

    1994-01-01

    PLOT3D is an interactive graphics program designed to help scientists visualize computational fluid dynamics (CFD) grids and solutions. Today, supercomputers and CFD algorithms can provide scientists with simulations of such highly complex phenomena that obtaining an understanding of the simulations has become a major problem. Tools which help the scientist visualize the simulations can be of tremendous aid. PLOT3D/AMES offers more functions and features, and has been adapted for more types of computers than any other CFD graphics program. Version 3.6b+ is supported for five computers and graphic libraries. Using PLOT3D, CFD physicists can view their computational models from any angle, observing the physics of problems and the quality of solutions. As an aid in designing aircraft, for example, PLOT3D's interactive computer graphics can show vortices, temperature, reverse flow, pressure, and dozens of other characteristics of air flow during flight. As critical areas become obvious, they can easily be studied more closely using a finer grid. PLOT3D is part of a computational fluid dynamics software cycle. First, a program such as 3DGRAPE (ARC-12620) helps the scientist generate computational grids to model an object and its surrounding space. Once the grids have been designed and parameters such as the angle of attack, Mach number, and Reynolds number have been specified, a "flow-solver" program such as INS3D (ARC-11794 or COS-10019) solves the system of equations governing fluid flow, usually on a supercomputer. Grids sometimes have as many as two million points, and the "flow-solver" produces a solution file which contains density, x- y- and z-momentum, and stagnation energy for each grid point. With such a solution file and a grid file containing up to 50 grids as input, PLOT3D can calculate and graphically display any one of 74 functions, including shock waves, surface pressure, velocity vectors, and particle traces. PLOT3D's 74 functions are organized into

  10. PLOT3D/AMES, APOLLO UNIX VERSION USING GMR3D (WITH TURB3D)

    Buning, P.

    1994-01-01

    PLOT3D is an interactive graphics program designed to help scientists visualize computational fluid dynamics (CFD) grids and solutions. Today, supercomputers and CFD algorithms can provide scientists with simulations of such highly complex phenomena that obtaining an understanding of the simulations has become a major problem. Tools which help the scientist visualize the simulations can be of tremendous aid. PLOT3D/AMES offers more functions and features, and has been adapted for more types of computers than any other CFD graphics program. Version 3.6b+ is supported for five computers and graphic libraries. Using PLOT3D, CFD physicists can view their computational models from any angle, observing the physics of problems and the quality of solutions. As an aid in designing aircraft, for example, PLOT3D's interactive computer graphics can show vortices, temperature, reverse flow, pressure, and dozens of other characteristics of air flow during flight. As critical areas become obvious, they can easily be studied more closely using a finer grid. PLOT3D is part of a computational fluid dynamics software cycle. First, a program such as 3DGRAPE (ARC-12620) helps the scientist generate computational grids to model an object and its surrounding space. Once the grids have been designed and parameters such as the angle of attack, Mach number, and Reynolds number have been specified, a "flow-solver" program such as INS3D (ARC-11794 or COS-10019) solves the system of equations governing fluid flow, usually on a supercomputer. Grids sometimes have as many as two million points, and the "flow-solver" produces a solution file which contains density, x- y- and z-momentum, and stagnation energy for each grid point. With such a solution file and a grid file containing up to 50 grids as input, PLOT3D can calculate and graphically display any one of 74 functions, including shock waves, surface pressure, velocity vectors, and particle traces. PLOT3D's 74 functions are organized into

  11. Single-channel 1.28 Tbit/s-525 km DQPSK transmission using ultrafast time-domain optical Fourier transformation and nonlinear optical loop mirror

    Guan, Pengyu; Mulvad, Hans Christian Hansen; Tomiyama, Yutaro;

    2011-01-01

    developed an ultrafast timedomain optical Fourier transformation technique in a round-trip configuration. By applying this technique to subpicosecond pulses, transmission impairments were greatly reduced, and BER performance below FEC limit was obtained with increased system margin. Copyright © 2011 The...

  12. ADT-3D Tumor Detection Assistant in 3D

    Jaime Lazcano Bello

    2008-12-01

    Full Text Available The present document describes ADT-3D (Three-Dimensional Tumor Detector Assistant, a prototype application developed to assist doctors diagnose, detect and locate tumors in the brain by using CT scan. The reader may find on this document an introduction to tumor detection; ADT-3D main goals; development details; description of the product; motivation for its development; result’s study; and areas of applicability.

  13. Metrological characterization of 3D imaging devices

    Guidi, G.

    2013-04-01

    Manufacturers often express the performance of a 3D imaging device in various non-uniform ways for the lack of internationally recognized standard requirements for metrological parameters able to identify the capability of capturing a real scene. For this reason several national and international organizations in the last ten years have been developing protocols for verifying such performance. Ranging from VDI/VDE 2634, published by the Association of German Engineers and oriented to the world of mechanical 3D measurements (triangulation-based devices), to the ASTM technical committee E57, working also on laser systems based on direct range detection (TOF, Phase Shift, FM-CW, flash LADAR), this paper shows the state of the art about the characterization of active range devices, with special emphasis on measurement uncertainty, accuracy and resolution. Most of these protocols are based on special objects whose shape and size are certified with a known level of accuracy. By capturing the 3D shape of such objects with a range device, a comparison between the measured points and the theoretical shape they should represent is possible. The actual deviations can be directly analyzed or some derived parameters can be obtained (e.g. angles between planes, distances between barycenters of spheres rigidly connected, frequency domain parameters, etc.). This paper shows theoretical aspects and experimental results of some novel characterization methods applied to different categories of active 3D imaging devices based on both principles of triangulation and direct range detection.

  14. Unassisted 3D camera calibration

    Atanassov, Kalin; Ramachandra, Vikas; Nash, James; Goma, Sergio R.

    2012-03-01

    With the rapid growth of 3D technology, 3D image capture has become a critical part of the 3D feature set on mobile phones. 3D image quality is affected by the scene geometry as well as on-the-device processing. An automatic 3D system usually assumes known camera poses accomplished by factory calibration using a special chart. In real life settings, pose parameters estimated by factory calibration can be negatively impacted by movements of the lens barrel due to shaking, focusing, or camera drop. If any of these factors displaces the optical axes of either or both cameras, vertical disparity might exceed the maximum tolerable margin and the 3D user may experience eye strain or headaches. To make 3D capture more practical, one needs to consider unassisted (on arbitrary scenes) calibration. In this paper, we propose an algorithm that relies on detection and matching of keypoints between left and right images. Frames containing erroneous matches, along with frames with insufficiently rich keypoint constellations, are detected and discarded. Roll, pitch yaw , and scale differences between left and right frames are then estimated. The algorithm performance is evaluated in terms of the remaining vertical disparity as compared to the maximum tolerable vertical disparity.

  15. 5-axis 3D Printer

    Grutle, Øyvind Kallevik

    2015-01-01

    3D printers have in recent years become extremely popular. Even though 3D printing technology have existed since the late 1980's, it is now considered one of the most significant technological breakthroughs of the twenty-first century. Several different 3D printing processes have been invented during the years. But it is the fused deposition modeling (FDM) which was one of the first invented that is considered the most popular today. Even though the FDM process is the most popular, it still s...

  16. Handbook of 3D integration

    Garrou , Philip; Ramm , Peter

    2014-01-01

    Edited by key figures in 3D integration and written by top authors from high-tech companies and renowned research institutions, this book covers the intricate details of 3D process technology.As such, the main focus is on silicon via formation, bonding and debonding, thinning, via reveal and backside processing, both from a technological and a materials science perspective. The last part of the book is concerned with assessing and enhancing the reliability of the 3D integrated devices, which is a prerequisite for the large-scale implementation of this emerging technology. Invaluable reading fo

  17. Exploration of 3D Printing

    Lin, Zeyu

    2014-01-01

    3D printing technology is introduced and defined in this Thesis. Some methods of 3D printing are illustrated and their principles are explained with pictures. Most of the essential parts are presented with pictures and their effects are explained within the whole system. Problems on Up! Plus 3D printer are solved and a DIY product is made with this machine. The processes of making product are recorded and the items which need to be noticed during the process are the highlight in this th...

  18. Tuotekehitysprojekti: 3D-tulostin

    Pihlajamäki, Janne

    2011-01-01

    Opinnäytetyössä tutustuttiin 3D-tulostamisen teknologiaan. Työssä käytiin läpi 3D-tulostimesta tehty tuotekehitysprojekti. Sen lisäksi esiteltiin yleisellä tasolla tuotekehitysprosessi ja syntyneiden tulosten mahdollisia suojausmenetelmiä. Tavoitteena tässä työssä oli kehittää markkinoilta jo löytyvää kotitulostin-tasoista 3D-laiteteknologiaa lähemmäksi ammattilaistason ratkaisua. Tavoitteeseen pyrittiin keskittymällä parantamaan laitteella saavutettavaa tulostustarkkuutta ja -nopeutt...

  19. Color 3D Reverse Engineering

    2002-01-01

    This paper presents a principle and a method of col or 3D laser scanning measurement. Based on the fundamental monochrome 3D measureme nt study, color information capture, color texture mapping, coordinate computati on and other techniques are performed to achieve color 3D measurement. The syste m is designed and composed of a line laser light emitter, one color CCD camera, a motor-driven rotary filter, a circuit card and a computer. Two steps in captu ring object's images in the measurement process: Firs...

  20. 3-D neutron transport benchmarks

    A set of 3-D neutron transport benchmark problems proposed by the Osaka University to NEACRP in 1988 has been calculated by many participants and the corresponding results are summarized in this report. The results of Keff, control rod worth and region-averaged fluxes for the four proposed core models, calculated by using various 3-D transport codes are compared and discussed. The calculational methods used were: Monte Carlo, Discrete Ordinates (Sn), Spherical Harmonics (Pn), Nodal Transport and others. The solutions of the four core models are quite useful as benchmarks for checking the validity of 3-D neutron transport codes

  1. 3D on the internet

    Puntar, Matej

    2012-01-01

    The purpose of this thesis is the presentation of already established and new technologies of displaying 3D content in a web browser. The thesis begins with a short presentation of the history of 3D content available on the internet and its development together with advantages and disadvantages of individual technologies. The latter two are described in detail as well is their use and the differences among them. Special emphasis has been given to WebGL, the newest technology of 3D conte...

  2. Heterodyne 3D ghost imaging

    Yang, Xu; Zhang, Yong; Yang, Chenghua; Xu, Lu; Wang, Qiang; Zhao, Yuan

    2016-06-01

    Conventional three dimensional (3D) ghost imaging measures range of target based on pulse fight time measurement method. Due to the limit of data acquisition system sampling rate, range resolution of the conventional 3D ghost imaging is usually low. In order to take off the effect of sampling rate to range resolution of 3D ghost imaging, a heterodyne 3D ghost imaging (HGI) system is presented in this study. The source of HGI is a continuous wave laser instead of pulse laser. Temporal correlation and spatial correlation of light are both utilized to obtain the range image of target. Through theory analysis and numerical simulations, it is demonstrated that HGI can obtain high range resolution image with low sampling rate.

  3. Conducting polymer 3D microelectrodes

    Sasso, Luigi; Vazquez, Patricia; Vedarethinam, Indumathi;

    2010-01-01

    Conducting polymer 3D microelectrodes have been fabricated for possible future neurological applications. A combination of micro-fabrication techniques and chemical polymerization methods has been used to create pillar electrodes in polyaniline and polypyrrole. The thin polymer films obtained...

  4. Main: TATCCAYMOTIFOSRAMY3D [PLACE

    Full Text Available TATCCAYMOTIFOSRAMY3D S000256 01-August-2006 (last modified) kehi TATCCAY motif found in rice (O. ... otif and G motif (see S000130) are responsible for sugar ... repression (Toyofuku et al. 1998); GATA; amylase; ...

  5. Combinatorial 3D Mechanical Metamaterials

    Coulais, Corentin; Teomy, Eial; de Reus, Koen; Shokef, Yair; van Hecke, Martin

    2015-03-01

    We present a class of elastic structures which exhibit 3D-folding motion. Our structures consist of cubic lattices of anisotropic unit cells that can be tiled in a complex combinatorial fashion. We design and 3d-print this complex ordered mechanism, in which we combine elastic hinges and defects to tailor the mechanics of the material. Finally, we use this large design space to encode smart functionalities such as surface patterning and multistability.

  6. 3D Face Appearance Model

    Lading, Brian; Larsen, Rasmus; Åström, Kalle

    2006-01-01

    We build a 3d face shape model, including inter- and intra-shape variations, derive the analytical jacobian of its resulting 2d rendered image, and show example of its fitting performance with light, pose, id, expression and texture variations.}......We build a 3d face shape model, including inter- and intra-shape variations, derive the analytical jacobian of its resulting 2d rendered image, and show example of its fitting performance with light, pose, id, expression and texture variations.}...

  7. 3D Face Apperance Model

    Lading, Brian; Larsen, Rasmus; Astrom, K

    2006-01-01

    We build a 3D face shape model, including inter- and intra-shape variations, derive the analytical Jacobian of its resulting 2D rendered image, and show example of its fitting performance with light, pose, id, expression and texture variations......We build a 3D face shape model, including inter- and intra-shape variations, derive the analytical Jacobian of its resulting 2D rendered image, and show example of its fitting performance with light, pose, id, expression and texture variations...

  8. AI 3D Cybug Gaming

    Ahmed, Zeeshan

    2010-01-01

    In this short paper I briefly discuss 3D war Game based on artificial intelligence concepts called AI WAR. Going in to the details, I present the importance of CAICL language and how this language is used in AI WAR. Moreover I also present a designed and implemented 3D War Cybug for AI WAR using CAICL and discus the implemented strategy to defeat its enemies during the game life.

  9. Use of Fourier domain filtering and dynamic programming in finding a titanium coil implant in high voltage x-ray images

    Nielsen, Henning; Hansen, Jesper Carl

    2006-01-01

    This paper deals with the problem of finding precise position and orientation of a titanium coil implant in humans. Analysis of high voltage X-rays stereo images are used to determine the true 3D position. High voltage images inherently presents with poor contrast. Various image processing techni...... determined the position of the titanium wire within less than 1 mm of ground truth determined from manual analysis of the images....

  10. Seismic Wave Amplification in 3D Alluvial Basins: 3D/1D Amplification Ratios from Fast Multipole BEM Simulations

    Fajardo, Kristel C Meza; Chaillat, Stéphanie; Lenti, Luca

    2016-01-01

    In this work, we study seismic wave amplification in alluvial basins having 3D standard geometries through the Fast Multipole Boundary Element Method in the frequency domain. We investigate how much 3D amplification differs from the 1D (horizontal layering) case. Considering incident fields of plane harmonic waves, we examine the relationships between the amplification level and the most relevant physical parameters of the problem (impedance contrast, 3D aspect ratio, vertical and oblique incidence of plane waves). The FMBEM results show that the most important parameters for wave amplification are the impedance contrast and the so-called equivalent shape ratio. Using these two parameters, we derive simple rules to compute the fundamental frequency for various 3D basin shapes and the corresponding 3D/1D amplification factor for 5% damping. Effects on amplification due to 3D basin asymmetry are also studied and incorporated in the derived rules.

  11. From 3D view to 3D print

    Dima, M.; Farisato, G.; Bergomi, M.; Viotto, V.; Magrin, D.; Greggio, D.; Farinato, J.; Marafatto, L.; Ragazzoni, R.; Piazza, D.

    2014-08-01

    In the last few years 3D printing is getting more and more popular and used in many fields going from manufacturing to industrial design, architecture, medical support and aerospace. 3D printing is an evolution of bi-dimensional printing, which allows to obtain a solid object from a 3D model, realized with a 3D modelling software. The final product is obtained using an additive process, in which successive layers of material are laid down one over the other. A 3D printer allows to realize, in a simple way, very complex shapes, which would be quite difficult to be produced with dedicated conventional facilities. Thanks to the fact that the 3D printing is obtained superposing one layer to the others, it doesn't need any particular work flow and it is sufficient to simply draw the model and send it to print. Many different kinds of 3D printers exist based on the technology and material used for layer deposition. A common material used by the toner is ABS plastics, which is a light and rigid thermoplastic polymer, whose peculiar mechanical properties make it diffusely used in several fields, like pipes production and cars interiors manufacturing. I used this technology to create a 1:1 scale model of the telescope which is the hardware core of the space small mission CHEOPS (CHaracterising ExOPlanets Satellite) by ESA, which aims to characterize EXOplanets via transits observations. The telescope has a Ritchey-Chrétien configuration with a 30cm aperture and the launch is foreseen in 2017. In this paper, I present the different phases for the realization of such a model, focusing onto pros and cons of this kind of technology. For example, because of the finite printable volume (10×10×12 inches in the x, y and z directions respectively), it has been necessary to split the largest parts of the instrument in smaller components to be then reassembled and post-processed. A further issue is the resolution of the printed material, which is expressed in terms of layers

  12. A 3-D chimera grid embedding technique

    Benek, J. A.; Buning, P. G.; Steger, J. L.

    1985-01-01

    A three-dimensional (3-D) chimera grid-embedding technique is described. The technique simplifies the construction of computational grids about complex geometries. The method subdivides the physical domain into regions which can accommodate easily generated grids. Communication among the grids is accomplished by interpolation of the dependent variables at grid boundaries. The procedures for constructing the composite mesh and the associated data structures are described. The method is demonstrated by solution of the Euler equations for the transonic flow about a wing/body, wing/body/tail, and a configuration of three ellipsoidal bodies.

  13. Regularisation of 3D Signed Distance Fields

    Paulsen, Rasmus Reinhold; Bærentzen, Jakob Andreas; Larsen, Rasmus

    Signed 3D distance fields are used a in a variety of domains. From shape modelling to surface registration. They are typically computed based on sampled point sets. If the input point set contains holes, the behaviour of the zero-level surface of the distance field is not well defined. In this...... Cholesky factorisation. It is demonstrated that the zero-level surface will act as a membrane after the proposed regularisation. This effectively closes holes in a predictable way. Finally, the performance of the method is tested with a set of synthetic point clouds of increasing complexity....

  14. 3D blob dynamics in toroidal geometry

    Nielsen, Anders Henry; Reiser, Dirk

    DIESEL code is an extension of the ESEL code [1]. It solves a simple interchange model in full 3D tokamak geometry, where the toroidal direction is divided into a number of drift planes. On each drift plane the equations are solved in a domain corresponding to the full 2D cross section of the tokamak and...... communicate parallel with the nearest drift planes using parameterized velocities, the ion sound speed, Cs for the density equation and the Alfvén speed VA for the vorticity equation. Results show that a decrease of Alfvénic interaction of electric potential and current density leads to the expected radial...

  15. Exponential mixing of the 3D stochastic Navier-Stokes equations driven by mildly degenerate noises

    Albeverio, S.; Debussche, A; Xu, L Lihu

    2009-01-01

    We prove the strong Feller property and exponential mixing for 3D stochastic Navier-Stokes equation driven by mildly degenerate noises (i.e. all but finitely many Fourier modes are forced) via Kolmogorov equation approach.

  16. On the regularity criterion of weak solution for the 3D viscous Magneto-hydrodynamics equations

    Chen, Qionglei; Miao, Changxing; Zhang, Zhifei

    2007-01-01

    We improve and extend some known regularity criterion of weak solution for the 3D viscous Magneto-hydrodynamics equations by means of the Fourier localization technique and Bony's para-product decomposition.

  17. Exponential Mixing of the 3D Stochastic Navier-Stokes Equations Driven by Mildly Degenerate Noises

    We prove the strong Feller property and exponential mixing for 3D stochastic Navier-Stokes equation driven by mildly degenerate noises (i.e. all but finitely many Fourier modes being forced) via a Kolmogorov equation approach.

  18. YouDash3D: exploring stereoscopic 3D gaming for 3D movie theaters

    Schild, Jonas; Seele, Sven; Masuch, Maic

    2012-03-01

    Along with the success of the digitally revived stereoscopic cinema, events beyond 3D movies become attractive for movie theater operators, i.e. interactive 3D games. In this paper, we present a case that explores possible challenges and solutions for interactive 3D games to be played by a movie theater audience. We analyze the setting and showcase current issues related to lighting and interaction. Our second focus is to provide gameplay mechanics that make special use of stereoscopy, especially depth-based game design. Based on these results, we present YouDash3D, a game prototype that explores public stereoscopic gameplay in a reduced kiosk setup. It features live 3D HD video stream of a professional stereo camera rig rendered in a real-time game scene. We use the effect to place the stereoscopic effigies of players into the digital game. The game showcases how stereoscopic vision can provide for a novel depth-based game mechanic. Projected trigger zones and distributed clusters of the audience video allow for easy adaptation to larger audiences and 3D movie theater gaming.

  19. Remote 3D Medical Consultation

    Welch, Greg; Sonnenwald, Diane H.; Fuchs, Henry; Cairns, Bruce; Mayer-Patel, Ketan; Yang, Ruigang; State, Andrei; Towles, Herman; Ilie, Adrian; Krishnan, Srinivas; Söderholm, Hanna M.

    Two-dimensional (2D) video-based telemedical consultation has been explored widely in the past 15-20 years. Two issues that seem to arise in most relevant case studies are the difficulty associated with obtaining the desired 2D camera views, and poor depth perception. To address these problems we are exploring the use of a small array of cameras to synthesize a spatially continuous range of dynamic three-dimensional (3D) views of a remote environment and events. The 3D views can be sent across wired or wireless networks to remote viewers with fixed displays or mobile devices such as a personal digital assistant (PDA). The viewpoints could be specified manually or automatically via user head or PDA tracking, giving the remote viewer virtual head- or hand-slaved (PDA-based) remote cameras for mono or stereo viewing. We call this idea remote 3D medical consultation (3DMC). In this article we motivate and explain the vision for 3D medical consultation; we describe the relevant computer vision/graphics, display, and networking research; we present a proof-of-concept prototype system; and we present some early experimental results supporting the general hypothesis that 3D remote medical consultation could offer benefits over conventional 2D televideo.

  20. Materialedreven 3d digital formgivning

    Hansen, Flemming Tvede

    2010-01-01

    Formålet med forskningsprojektet er for det første at understøtte keramikeren i at arbejde eksperimenterende med digital formgivning, og for det andet at bidrage til en tværfaglig diskurs om brugen af digital formgivning. Forskningsprojektet fokuserer på 3d formgivning og derved på 3d digital...... formgivning og Rapid Prototyping (RP). RP er en fællesbetegnelse for en række af de teknikker, der muliggør at overføre den digitale form til 3d fysisk form. Forskningsprojektet koncentrerer sig om to overordnede forskningsspørgsmål. Det første handler om, hvordan viden og erfaring indenfor det keramiske...... fagområde kan blive udnyttet i forhold til 3d digital formgivning. Det andet handler om, hvad en sådan tilgang kan bidrage med, og hvordan den kan blive udnyttet i et dynamisk samspil med det keramiske materiale i formgivningen af 3d keramiske artefakter. Materialedreven formgivning er karakteriseret af en...

  1. Novel 3D media technologies

    Dagiuklas, Tasos

    2015-01-01

    This book describes recent innovations in 3D media and technologies, with coverage of 3D media capturing, processing, encoding, and adaptation, networking aspects for 3D Media, and quality of user experience (QoE). The contributions are based on the results of the FP7 European Project ROMEO, which focuses on new methods for the compression and delivery of 3D multi-view video and spatial audio, as well as the optimization of networking and compression jointly across the future Internet. The delivery of 3D media to individual users remains a highly challenging problem due to the large amount of data involved, diverse network characteristics and user terminal requirements, as well as the user’s context such as their preferences and location. As the number of visual views increases, current systems will struggle to meet the demanding requirements in terms of delivery of consistent video quality to fixed and mobile users. ROMEO will present hybrid networking solutions that combine the DVB-T2 and DVB-NGH broadcas...

  2. 3D future internet media

    Dagiuklas, Tasos

    2014-01-01

    This book describes recent innovations in 3D media and technologies, with coverage of 3D media capturing, processing, encoding, and adaptation, networking aspects for 3D Media, and quality of user experience (QoE). The main contributions are based on the results of the FP7 European Projects ROMEO, which focus on new methods for the compression and delivery of 3D multi-view video and spatial audio, as well as the optimization of networking and compression jointly across the Future Internet (www.ict-romeo.eu). The delivery of 3D media to individual users remains a highly challenging problem due to the large amount of data involved, diverse network characteristics and user terminal requirements, as well as the user’s context such as their preferences and location. As the number of visual views increases, current systems will struggle to meet the demanding requirements in terms of delivery of constant video quality to both fixed and mobile users. ROMEO will design and develop hybrid-networking solutions that co...

  3. Modification of 3D milling machine to 3D printer

    Halamíček, Lukáš

    2015-01-01

    Tato práce se zabývá přestavbou gravírovací frézky na 3D tiskárnu. V první části se práce zabývá možnými technologiemi 3D tisku a možností jejich využití u přestavby. Dále jsou popsány a vybrány vhodné součásti pro přestavbu. V další části je realizováno řízení ohřevu podložky, trysky a řízení posuvu drátu pomocí softwaru TwinCat od společnosti Beckhoff na průmyslovém počítači. Výsledkem práce by měla být oživená 3D tiskárna. This thesis deals with rebuilding of engraving machine to 3D pri...

  4. 3D Imager and Method for 3D imaging

    Kumar, P.; Staszewski, R.; Charbon, E.

    2013-01-01

    3D imager comprising at least one pixel, each pixel comprising a photodetectorfor detecting photon incidence and a time-to-digital converter system configured for referencing said photon incidence to a reference clock, and further comprising a reference clock generator provided for generating the re

  5. Validation of TRAB-3D

    TRAB-3D is a reactor dynamics code with three-dimensional neutronics coupled to core and circuit thermal-hydraulics. The code, entirely developed at VTT, can be used in transient and accident analyses of boiling (BWR) and pressurized water (PWR) reactors with rectangular fuel bundle geometry. The validation history of TRAB-3D includes calculation of international benchmark exercises, as well as comparisons with measured data from real plant transients. The most recent validation case is a load rejection test performed at the Olkiluoto 1 nuclear power plant in 1998 in connection with the power uprating project. The fact that there is local power measurement data available from this test makes it a suitable case for three-dimensional core model validation. The agreement between the results of the TRAB-3D calculation and the measurements is very good. (orig.)

  6. Crowded Field 3D Spectroscopy

    Becker, T; Roth, M M; Becker, Thomas; Fabrika, Sergei; Roth, Martin M.

    2003-01-01

    The quantitative spectroscopy of stellar objects in complex environments is mainly limited by the ability of separating the object from the background. Standard slit spectroscopy, restricting the field of view to one dimension, is obviously not the proper technique in general. The emerging Integral Field (3D) technique with spatially resolved spectra of a two-dimensional field of view provides a great potential for applying advanced subtraction methods. In this paper an image reconstruction algorithm to separate point sources and a smooth background is applied to 3D data. Several performance tests demonstrate the photometric quality of the method. The algorithm is applied to real 3D observations of a sample Planetary Nebula in M31, whose spectrum is contaminated by the bright and complex galaxy background. The ability of separating sources is also studied in a crowded stellar field in M33.

  7. Markerless 3D Face Tracking

    Walder, Christian; Breidt, Martin; Bulthoff, Heinrich;

    2009-01-01

    We present a novel algorithm for the markerless tracking of deforming surfaces such as faces. We acquire a sequence of 3D scans along with color images at 40Hz. The data is then represented by implicit surface and color functions, using a novel partition-of-unity type method of efficiently...... combining local regressors using nearest neighbor searches. Both these functions act on the 4D space of 3D plus time, and use temporal information to handle the noise in individual scans. After interactive registration of a template mesh to the first frame, it is then automatically deformed to track...... the scanned surface, using the variation of both shape and color as features in a dynamic energy minimization problem. Our prototype system yields high-quality animated 3D models in correspondence, at a rate of approximately twenty seconds per timestep. Tracking results for faces and other objects...

  8. 3D vector flow imaging

    Pihl, Michael Johannes

    The main purpose of this PhD project is to develop an ultrasonic method for 3D vector flow imaging. The motivation is to advance the field of velocity estimation in ultrasound, which plays an important role in the clinic. The velocity of blood has components in all three spatial dimensions, yet...... conventional methods can estimate only the axial component. Several approaches for 3D vector velocity estimation have been suggested, but none of these methods have so far produced convincing in vivo results nor have they been adopted by commercial manufacturers. The basis for this project is the Transverse...... on the TO fields are suggested. They can be used to optimize the TO method. In the third part, a TO method for 3D vector velocity estimation is proposed. It employs a 2D phased array transducer and decouples the velocity estimation into three velocity components, which are estimated simultaneously based on 5...

  9. 3D-grafiikkamoottori mobiililaitteille

    Vahlman, Lauri

    2014-01-01

    Tässä insinöörityössä käydään läpi mobiililaitteille suunnatun yksinkertaisen 3D-grafiikkamoottorin suunnittelu ja toteutus käyttäen OpenGL ES -rajapintaa. Työssä esitellään grafiikkamoottorin toteutuksessa käytettyjä tekniikoita sekä tutustutaan moottorin rakenteeseen ja toteutuksellisiin yksityiskohtiin. Työn alkupuolella tutustutaan myös modernin 3D-grafiikan yleisiin periaatteisiin ja toimintaan sekä käydään läpi 3D-grafiikkaan liittyviä suorituskykyongelmia. Työn loppupuolella esitel...

  10. 3D Computations and Experiments

    Couch, R; Faux, D; Goto, D; Nikkel, D

    2004-04-05

    This project consists of two activities. Task A, Simulations and Measurements, combines all the material model development and associated numerical work with the materials-oriented experimental activities. The goal of this effort is to provide an improved understanding of dynamic material properties and to provide accurate numerical representations of those properties for use in analysis codes. Task B, ALE3D Development, involves general development activities in the ALE3D code with the focus of improving simulation capabilities for problems of mutual interest to DoD and DOE. Emphasis is on problems involving multi-phase flow, blast loading of structures and system safety/vulnerability studies.

  11. 3D proton beam micromachining

    Focused high energy ion beam micromachining is the newest of the micromachining techniques. There are about 50 scanning proton microprobe facilities worldwide, but so far only few of them showed activity in this promising field. High energy ion beam micromachining using a direct-write scanning MeV ion beam is capable of producing 3D microstructures and components with well defined lateral and depth geometry. The technique has high potential in the manufacture of 3D molds, stamps, and masks for X-ray lithography (LIGA), and also in the rapid prototyping of microcomponents either for research purposes or for components testing prior to batch production. (R.P.)

  12. Fast phase-added stereogram algorithm for generation of photorealistic 3D content.

    Kang, Hoonjong; Stoykova, Elena; Yoshikawa, Hiroshi

    2016-01-20

    A new phase-added stereogram algorithm for accelerated computation of holograms from a point cloud model is proposed. The algorithm relies on the hologram segmentation, sampling of directional information, and usage of the fast Fourier transform with a finer grid in the spatial frequency domain than is provided by the segment size. The algorithm gives improved quality of reconstruction due to new phase compensation introduced in the segment fringe patterns. The result is finer beam steering leading to high peak intensity and a large peak signal-to-noise ratio in reconstruction. The feasibility of the algorithm is checked by the generation of 3D contents for a color wavefront printer. PMID:26835945

  13. Making Inexpensive 3-D Models

    Manos, Harry

    2016-01-01

    Visual aids are important to student learning, and they help make the teacher's job easier. Keeping with the "TPT" theme of "The Art, Craft, and Science of Physics Teaching," the purpose of this article is to show how teachers, lacking equipment and funds, can construct a durable 3-D model reference frame and a model gravity…

  14. 3D Face Appearance Model

    Lading, Brian; Larsen, Rasmus; Åström, Kalle

    2006-01-01

    We build a 3d face shape model, including inter- and intra-shape variations, derive the analytical jacobian of its resulting 2d rendered image, and show example of its fitting performance with light, pose, id, expression and texture variations.}

  15. 3D Face Apperance Model

    Lading, Brian; Larsen, Rasmus; Astrom, K

    2006-01-01

    We build a 3D face shape model, including inter- and intra-shape variations, derive the analytical Jacobian of its resulting 2D rendered image, and show example of its fitting performance with light, pose, id, expression and texture variations

  16. 3D Printing: Exploring Capabilities

    Samuels, Kyle; Flowers, Jim

    2015-01-01

    As 3D printers become more affordable, schools are using them in increasing numbers. They fit well with the emphasis on product design in technology and engineering education, allowing students to create high-fidelity physical models to see and test different iterations in their product designs. They may also help students to "think in three…

  17. 3D terahertz beam profiling

    Pedersen, Pernille Klarskov; Strikwerda, Andrew; Wang, Tianwu;

    2013-01-01

    We present a characterization of THz beams generated in both a two-color air plasma and in a LiNbO3 crystal. Using a commercial THz camera, we record intensity images as a function of distance through the beam waist, from which we extract 2D beam profiles and visualize our measurements into 3D beam...

  18. Viewing galaxies in 3D

    Krajnović, Davor

    2016-01-01

    Thanks to a technique that reveals galaxies in 3D, astronomers can now show that many galaxies have been wrongly classified. Davor Krajnovi\\'c argues that the classification scheme proposed 85 years ago by Edwin Hubble now needs to be revised.

  19. Priprava 3D modelov za 3D tisk

    Pikovnik, Tomaž

    2015-01-01

    Po mnenju nekaterih strokovnjakov bo aditivna proizvodnja (ali 3D tiskanje) spremenila proizvodnjo industrijo, saj si bo vsak posameznik lahko natisnil svoj objekt po želji. V diplomski nalogi so predstavljene nekatere tehnologije aditivne proizvodnje. V nadaljevanju diplomske naloge je predstavljena izdelava makete hiše v merilu 1:100, vse od modeliranja do tiskanja. Poseben poudarek je posvečen predelavi modela, da je primeren za tiskanje, kjer je razvit pristop za hitrejše i...

  20. Post processing of 3D models for 3D printing

    Pikovnik, Tomaž

    2015-01-01

    According to the opinion of some experts the additive manufacturing or 3D printing will change manufacturing industry, because any individual could print their own model according to his or her wishes. In this graduation thesis some of the additive manufacturing technologies are presented. Furthermore in the production of house scale model in 1:100 is presented, starting from modeling to printing. Special attention is given to postprocessing of the building model elements us...

  1. DYNA3D2000*, Explicit 3-D Hydrodynamic FEM Program

    1 - Description of program or function: DYNA3D2000 is a nonlinear explicit finite element code for analyzing 3-D structures and solid continuum. The code is vectorized and available on several computer platforms. The element library includes continuum, shell, beam, truss and spring/damper elements to allow maximum flexibility in modeling physical problems. Many materials are available to represent a wide range of material behavior, including elasticity, plasticity, composites, thermal effects and rate dependence. In addition, DYNA3D has a sophisticated contact interface capability, including frictional sliding, single surface contact and automatic contact generation. 2 - Method of solution: Discretization of a continuous model transforms partial differential equations into algebraic equations. A numerical solution is then obtained by solving these algebraic equations through a direct time marching scheme. 3 - Restrictions on the complexity of the problem: Recent software improvements have eliminated most of the user identified limitations with dynamic memory allocation and a very large format description that has pushed potential problem sizes beyond the reach of most users. The dominant restrictions remain in code execution speed and robustness, which the developers constantly strive to improve

  2. 3-D Relativistic MHD Simulations

    Nishikawa, K.-I.; Frank, J.; Koide, S.; Sakai, J.-I.; Christodoulou, D. M.; Sol, H.; Mutel, R. L.

    1998-12-01

    We present 3-D numerical simulations of moderately hot, supersonic jets propagating initially along or obliquely to the field lines of a denser magnetized background medium with Lorentz factors of W = 4.56 and evolving in a four-dimensional spacetime. The new results are understood as follows: Relativistic simulations have consistently shown that these jets are effectively heavy and so they do not suffer substantial momentum losses and are not decelerated as efficiently as their nonrelativistic counterparts. In addition, the ambient magnetic field, however strong, can be pushed aside with relative ease by the beam, provided that the degrees of freedom associated with all three spatial dimensions are followed self-consistently in the simulations. This effect is analogous to pushing Japanese ``noren'' or vertical Venetian blinds out of the way while the slats are allowed to bend in 3-D space rather than as a 2-D slab structure.

  3. 3D Printed Robotic Hand

    Pizarro, Yaritzmar Rosario; Schuler, Jason M.; Lippitt, Thomas C.

    2013-01-01

    Dexterous robotic hands are changing the way robots and humans interact and use common tools. Unfortunately, the complexity of the joints and actuations drive up the manufacturing cost. Some cutting edge and commercially available rapid prototyping machines now have the ability to print multiple materials and even combine these materials in the same job. A 3D model of a robotic hand was designed using Creo Parametric 2.0. Combining "hard" and "soft" materials, the model was printed on the Object Connex350 3D printer with the purpose of resembling as much as possible the human appearance and mobility of a real hand while needing no assembly. After printing the prototype, strings where installed as actuators to test mobility. Based on printing materials, the manufacturing cost of the hand was $167, significantly lower than other robotic hands without the actuators since they have more complex assembly processes.

  4. Forensic 3D Scene Reconstruction

    Traditionally law enforcement agencies have relied on basic measurement and imaging tools, such as tape measures and cameras, in recording a crime scene. A disadvantage of these methods is that they are slow and cumbersome. The development of a portable system that can rapidly record a crime scene with current camera imaging, 3D geometric surface maps, and contribute quantitative measurements such as accurate relative positioning of crime scene objects, would be an asset to law enforcement agents in collecting and recording significant forensic data. The purpose of this project is to develop a feasible prototype of a fast, accurate, 3D measurement and imaging system that would support law enforcement agents to quickly document and accurately record a crime scene

  5. Forensic 3D Scene Reconstruction

    LITTLE,CHARLES Q.; PETERS,RALPH R.; RIGDON,J. BRIAN; SMALL,DANIEL E.

    1999-10-12

    Traditionally law enforcement agencies have relied on basic measurement and imaging tools, such as tape measures and cameras, in recording a crime scene. A disadvantage of these methods is that they are slow and cumbersome. The development of a portable system that can rapidly record a crime scene with current camera imaging, 3D geometric surface maps, and contribute quantitative measurements such as accurate relative positioning of crime scene objects, would be an asset to law enforcement agents in collecting and recording significant forensic data. The purpose of this project is to develop a feasible prototype of a fast, accurate, 3D measurement and imaging system that would support law enforcement agents to quickly document and accurately record a crime scene.

  6. [Real time 3D echocardiography

    Bauer, F.; Shiota, T.; Thomas, J. D.

    2001-01-01

    Three-dimensional representation of the heart is an old concern. Usually, 3D reconstruction of the cardiac mass is made by successive acquisition of 2D sections, the spatial localisation and orientation of which require complex guiding systems. More recently, the concept of volumetric acquisition has been introduced. A matricial emitter-receiver probe complex with parallel data processing provides instantaneous of a pyramidal 64 degrees x 64 degrees volume. The image is restituted in real time and is composed of 3 planes (planes B and C) which can be displaced in all spatial directions at any time during acquisition. The flexibility of this system of acquisition allows volume and mass measurement with greater accuracy and reproducibility, limiting inter-observer variability. Free navigation of the planes of investigation allows reconstruction for qualitative and quantitative analysis of valvular heart disease and other pathologies. Although real time 3D echocardiography is ready for clinical usage, some improvements are still necessary to improve its conviviality. Then real time 3D echocardiography could be the essential tool for understanding, diagnosis and management of patients.

  7. Fiscal 1998 research report. R and D on the nanometer-controlled optical disk system / Magnetic domain- response 3-D optical memory technology (Development of rational use technology of energy); 1998 nendo nanometa seigyo hikari disk system no kenkyu kaihatsu seika hokokusho (jiku oto sanjigen hikari memory gijutsu). Energy shiyo gorika gijutsu kaihatsu

    NONE

    1999-03-01

    This report describes the fiscal 1998 result on the magnetic domain-response 3-D optical memory of the nanometer-controlled optical disk system. The magnetic domain response technology is a next-generation optical disk technology which copies fine bits recorded on a recording layer on a read-out layer while magnifying them, and detects the bit smaller than a read out optical spot as large signal level. Magnetic domain-response read out of a fine magnetic domain of 0.12{mu}m in mark length and 0.60{mu}m in track width recorded by optical pulse magnetic field modulation was attempted under the conditions of conventional wavelength (around 680nm) and NA (0.55), and succeeded in expanding unobservable signals up to saturated amplitudes. This is equivalent to a 2-D recording density of 10Gbit/in{sup 2}. Crosstalk-free read out was also verified. As for R and D on the magnetic circular polarization enhanced multiple read out system, the 2-wavelength read out system was fabricated by using 515nm Ar laser light and 780nm semiconductor laser light. It was verified in 2- wavelength read out test that the multi-wavelength read out system is reasonable theoretically. (NEDO)

  8. An overview of 3D topology for LADM-based objects

    Zulkifli, N.A.; Rahman, A.A.; Van Oosterom, P.J.M.

    2015-01-01

    This paper reviews 3D topology within Land Administration Domain Model (LADM) international standard. It is important to review characteristic of the different 3D topological models and to choose the most suitable model for certain applications. The characteristic of the different 3D topological mod

  9. Product Theorem for Quaternion Fourier Transform

    Bahri, Mawardi

    2014-01-01

    In this paper we present the generalized convolution and correlation for the two-dim ensional discrete quaternion Fourier transform (DQFT). We provide several new properties of the generalizations. There results can be considered as the extension of correlation and convolution properties of real and complex Fourier transform to the DQFT domain.

  10. Wireless 3D Chocolate Printer

    FROILAN G. DESTREZA

    2014-02-01

    Full Text Available This study is for the BSHRM Students of Batangas State University (BatStateU ARASOF for the researchers believe that the Wireless 3D Chocolate Printer would be helpful in their degree program especially on making creative, artistic, personalized and decorative chocolate designs. The researchers used the Prototyping model as procedural method for the successful development and implementation of the hardware and software. This method has five phases which are the following: quick plan, quick design, prototype construction, delivery and feedback and communication. This study was evaluated by the BSHRM Students and the assessment of the respondents regarding the software and hardware application are all excellent in terms of Accuracy, Effecitveness, Efficiency, Maintainability, Reliability and User-friendliness. Also, the overall level of acceptability of the design project as evaluated by the respondents is excellent. With regard to the observation about the best raw material to use in 3D printing, the chocolate is good to use as the printed material is slightly distorted,durable and very easy to prepare; the icing is also good to use as the printed material is not distorted and is very durable but consumes time to prepare; the flour is not good as the printed material is distorted, not durable but it is easy to prepare. The computation of the economic viability level of 3d printer with reference to ROI is 37.14%. The recommendation of the researchers in the design project are as follows: adding a cooling system so that the raw material will be more durable, development of a more simplified version and improving the extrusion process wherein the user do not need to stop the printing process just to replace the empty syringe with a new one.

  11. INGRID, 3-D Mesh Generator for Program DYNA3D and NIKE3D and FACET and TOPAZ3D

    1 - Description of program or function: INGRID is a general-purpose, three-dimensional mesh generator developed for use with finite element, nonlinear, structural dynamics codes. INGRID generates the large and complex input data files for DYNA3D (NESC 9909), NIKE3D (NESC 9725), FACET, and TOPAZ3D. One of the greatest advantages of INGRID is that virtually any shape can be described without resorting to wedge elements, tetrahedrons, triangular elements or highly distorted quadrilateral or hexahedral elements. Other capabilities available are in the areas of geometry and graphics. Exact surface equations and surface intersections considerably improve the ability to deal with accurate models, and a hidden line graphics algorithm is included which is efficient on the most complicated meshes. The most important new capability is associated with the boundary conditions, loads, and material properties required by nonlinear mechanics programs. Commands have been designed for each case to minimize user effort. This is particularly important since special processing is almost always required for each load or boundary condition. 2 - Method of solution: Geometries are described primarily using the index space notation of the INGEN program (NESC 975) with an additional type of notation, index progression. Index progressions provide a concise and simple method for describing complex structures; the concept was developed to facilitate defining multiple regions in index space. Rather than specifying the minimum and maximum indices for a region, one specifies the progression of indices along the I, J and K directions, respectively. The index progression method allows the analyst to describe most geometries including nodes and elements with roughly the same amount of input as a solids modeler

  12. Tehokas 3D-animaatiotuotanto

    Järvinen, Manu

    2009-01-01

    Opinnäytetyössä tutkittiin tehokasta tapaa toteuttaa minuutin mittainen animaatio Scene.org Awards -tapahtuman avajaisseremoniaan. Kyseinen video toteutettiin osana opinnäytetyötä. Työhön osallistui tekijän lisäksi 3D-mallintaja sekä muusikko. Työkaluina käytettiin pääasiassa Autodesk 3ds Max-, sekä Adobe After Effects- ja Adobe Photoshop -ohjelmia. Opinnäytetyö koostuu animaatioprojektin tuotantoputken ja tiedostonhallintamallin perinpohjaisesta läpikäymisestä sekä sen asian tutkimisesta...

  13. Making Inexpensive 3-D Models

    Manos, Harry

    2016-03-01

    Visual aids are important to student learning, and they help make the teacher's job easier. Keeping with the TPT theme of "The Art, Craft, and Science of Physics Teaching," the purpose of this article is to show how teachers, lacking equipment and funds, can construct a durable 3-D model reference frame and a model gravity well tailored to specific class lessons. Most of the supplies are readily available in the home or at school: rubbing alcohol, a rag, two colors of spray paint, art brushes, and masking tape. The cost of these supplies, if you don't have them, is less than 20.

  14. How 3-D Movies Work

    吕铁雄

    2011-01-01

    难度:★★★★☆词数:450 建议阅读时间:8分钟 Most people see out of two eyes. This is a basic fact of humanity,but it’s what makes possible the illusion of depth(纵深幻觉) that 3-D movies create. Human eyes are spaced about two inches apart, meaning that each eye gives the brain a slightly different perspective(透视感)on the same object. The brain then uses this variance to quickly determine an object’s distance.

  15. Virtual 3-D Facial Reconstruction

    Martin Paul Evison

    2000-06-01

    Full Text Available Facial reconstructions in archaeology allow empathy with people who lived in the past and enjoy considerable popularity with the public. It is a common misconception that facial reconstruction will produce an exact likeness; a resemblance is the best that can be hoped for. Research at Sheffield University is aimed at the development of a computer system for facial reconstruction that will be accurate, rapid, repeatable, accessible and flexible. This research is described and prototypical 3-D facial reconstructions are presented. Interpolation models simulating obesity, ageing and ethnic affiliation are also described. Some strengths and weaknesses in the models, and their potential for application in archaeology are discussed.

  16. Critical Comparison of 3-d Imaging Approaches for NGST

    Bennett, Charles L.

    1999-01-01

    Currently three imaging spectrometer architectures, tunable filter, dispersive, and Fourier transform, are viable for imaging the universe in three dimensions. There are domains of greatest utility for each of these architectures. The optimum choice among the various alternative architectures is dependent on the nature of the desired observations, the maturity of the relevant technology, and the character of the backgrounds. The domain appropriate for each of the alternatives is delineated; b...

  17. Positional Awareness Map 3D (PAM3D)

    Hoffman, Monica; Allen, Earl L.; Yount, John W.; Norcross, April Louise

    2012-01-01

    The Western Aeronautical Test Range of the National Aeronautics and Space Administration s Dryden Flight Research Center needed to address the aging software and hardware of its current situational awareness display application, the Global Real-Time Interactive Map (GRIM). GRIM was initially developed in the late 1980s and executes on older PC architectures using a Linux operating system that is no longer supported. Additionally, the software is difficult to maintain due to its complexity and loss of developer knowledge. It was decided that a replacement application must be developed or acquired in the near future. The replacement must provide the functionality of the original system, the ability to monitor test flight vehicles in real-time, and add improvements such as high resolution imagery and true 3-dimensional capability. This paper will discuss the process of determining the best approach to replace GRIM, and the functionality and capabilities of the first release of the Positional Awareness Map 3D.

  18. A review on the systematic formulation of 3D multiparameter full waveform inversion in viscoelastic medium

    Yang, Pengliang; Brossier, Romain; Métivier, Ludovic; Virieux, Jean

    2016-07-01

    In this paper we study 3D multiparameter full waveform inversion (FWI) in viscoelastic media based on the generalized Maxwell/Zener body (GMB/GZB) including arbitrary number of attenuation mechanisms. We present a frequency-domain energy analysis to establish the stability condition of a full anisotropic viscoelastic system, according to zero-valued boundary condition and the elastic-viscoelastic correspondence principle: the real-valued stiffness matrix becomes a complex-valued one in Fourier domain when seismic attenuation is taken into account. We develop a least-squares optimization approach to linearly relate the quality factor with the anelastic coefficients by estimating a set of constants which are independent of the spatial coordinates, which supplies an explicit incorporation of the parameter Q in the general viscoelastic wave equation. By introducing the Lagrangian multipliers into the matrix expression of the wave equation with implicit time integration, we build a systematic formulation of multiparameter full waveform inversion for full anisotropic viscoelastic wave equation, while the equivalent form of the state and adjoint equation with explicit time integration is available to be resolved efficiently. In particular, this formulation lays the foundation for the inversion of the parameter Q in the time domain with full anisotropic viscoelastic properties. In the 3D isotropic viscoelastic settings, the anelastic coefficients and the quality factors using bulk and shear moduli parameterization can be related to the counterparts using P- and S- velocity. Gradients with respect to any other parameter of interest can be found by chain rule. Pioneering numerical validations as well as the real applications of this most generic framework will be carried out to disclose the potential of viscoelastic FWI when adequate high performance computing resources and the field data are available.

  19. 3D Printable Graphene Composite

    Wei, Xiaojun; Li, Dong; Jiang, Wei; Gu, Zheming; Wang, Xiaojuan; Zhang, Zengxing; Sun, Zhengzong

    2015-07-01

    In human being’s history, both the Iron Age and Silicon Age thrived after a matured massive processing technology was developed. Graphene is the most recent superior material which could potentially initialize another new material Age. However, while being exploited to its full extent, conventional processing methods fail to provide a link to today’s personalization tide. New technology should be ushered in. Three-dimensional (3D) printing fills the missing linkage between graphene materials and the digital mainstream. Their alliance could generate additional stream to push the graphene revolution into a new phase. Here we demonstrate for the first time, a graphene composite, with a graphene loading up to 5.6 wt%, can be 3D printable into computer-designed models. The composite’s linear thermal coefficient is below 75 ppm·°C-1 from room temperature to its glass transition temperature (Tg), which is crucial to build minute thermal stress during the printing process.

  20. 3D printed bionic ears.

    Mannoor, Manu S; Jiang, Ziwen; James, Teena; Kong, Yong Lin; Malatesta, Karen A; Soboyejo, Winston O; Verma, Naveen; Gracias, David H; McAlpine, Michael C

    2013-06-12

    The ability to three-dimensionally interweave biological tissue with functional electronics could enable the creation of bionic organs possessing enhanced functionalities over their human counterparts. Conventional electronic devices are inherently two-dimensional, preventing seamless multidimensional integration with synthetic biology, as the processes and materials are very different. Here, we present a novel strategy for overcoming these difficulties via additive manufacturing of biological cells with structural and nanoparticle derived electronic elements. As a proof of concept, we generated a bionic ear via 3D printing of a cell-seeded hydrogel matrix in the anatomic geometry of a human ear, along with an intertwined conducting polymer consisting of infused silver nanoparticles. This allowed for in vitro culturing of cartilage tissue around an inductive coil antenna in the ear, which subsequently enables readout of inductively-coupled signals from cochlea-shaped electrodes. The printed ear exhibits enhanced auditory sensing for radio frequency reception, and complementary left and right ears can listen to stereo audio music. Overall, our approach suggests a means to intricately merge biologic and nanoelectronic functionalities via 3D printing. PMID:23635097

  1. 3D Ion Temperature Reconstruction

    Tanabe, Hiroshi; You, Setthivoine; Balandin, Alexander; Inomoto, Michiaki; Ono, Yasushi

    2009-11-01

    The TS-4 experiment at the University of Tokyo collides two spheromaks to form a single high-beta compact toroid. Magnetic reconnection during the merging process heats and accelerates the plasma in toroidal and poloidal directions. The reconnection region has a complex 3D topology determined by the pitch of the spheromak magnetic fields at the merging plane. A pair of multichord passive spectroscopic diagnostics have been established to measure the ion temperature and velocity in the reconnection volume. One setup measures spectral lines across a poloidal plane, retrieving velocity and temperature from Abel inversion. The other, novel setup records spectral lines across another section of the plasma and reconstructs velocity and temperature from 3D vector and 2D scalar tomography techniques. The magnetic field linking both measurement planes is determined from in situ magnetic probe arrays. The ion temperature is then estimated within the volume between the two measurement planes and at the reconnection region. The measurement is followed over several repeatable discharges to follow the heating and acceleration process during the merging reconnection.

  2. LOTT RANCH 3D PROJECT

    The Lott Ranch 3D seismic prospect located in Garza County, Texas is a project initiated in September of 1991 by the J.M. Huber Corp., a petroleum exploration and production company. By today's standards the 126 square mile project does not seem monumental, however at the time it was conceived it was the most intensive land 3D project ever attempted. Acquisition began in September of 1991 utilizing GEO-SEISMIC, INC., a seismic data contractor. The field parameters were selected by J.M. Huber, and were of a radical design. The recording instruments used were GeoCor IV amplifiers designed by Geosystems Inc., which record the data in signed bit format. It would not have been practical, if not impossible, to have processed the entire raw volume with the tools available at that time. The end result was a dataset that was thought to have little utility due to difficulties in processing the field data. In 1997, Yates Energy Corp. located in Roswell, New Mexico, formed a partnership to further develop the project. Through discussions and meetings with Pinnacle Seismic, it was determined that the original Lott Ranch 3D volume could be vastly improved upon reprocessing. Pinnacle Seismic had shown the viability of improving field-summed signed bit data on smaller 2D and 3D projects. Yates contracted Pinnacle Seismic Ltd. to perform the reprocessing. This project was initiated with high resolution being a priority. Much of the potential resolution was lost through the initial summing of the field data. Modern computers that are now being utilized have tremendous speed and storage capacities that were cost prohibitive when this data was initially processed. Software updates and capabilities offer a variety of quality control and statics resolution, which are pertinent to the Lott Ranch project. The reprocessing effort was very successful. The resulting processed data-set was then interpreted using modern PC-based interpretation and mapping software. Production data, log data

  3. 3D Printing of Graphene Aerogels.

    Zhang, Qiangqiang; Zhang, Feng; Medarametla, Sai Pradeep; Li, Hui; Zhou, Chi; Lin, Dong

    2016-04-01

    3D printing of a graphene aerogel with true 3D overhang structures is highlighted. The aerogel is fabricated by combining drop-on-demand 3D printing and freeze casting. The water-based GO ink is ejected and freeze-cast into designed 3D structures. The lightweight (printed graphene aerogel presents superelastic and high electrical conduction. PMID:26861680

  4. 3D biometrics systems and applications

    Zhang, David

    2013-01-01

    Includes discussions on popular 3D imaging technologies, combines them with biometric applications, and then presents real 3D biometric systems Introduces many efficient 3D feature extraction, matching, and fusion algorithms Techniques presented have been supported by experimental results using various 3D biometric classifications

  5. Fast fully 3-D image reconstruction in PET using planograms.

    Brasse, D; Kinahan, P E; Clackdoyle, R; Defrise, M; Comtat, C; Townsend, D W

    2004-04-01

    We present a method of performing fast and accurate three-dimensional (3-D) backprojection using only Fourier transform operations for line-integral data acquired by planar detector arrays in positron emission tomography. This approach is a 3-D extension of the two-dimensional (2-D) linogram technique of Edholm. By using a special choice of parameters to index a line of response (LOR) for a pair of planar detectors, rather than the conventional parameters used to index a LOR for a circular tomograph, all the LORs passing through a point in the field of view (FOV) lie on a 2-D plane in the four-dimensional (4-D) data space. Thus, backprojection of all the LORs passing through a point in the FOV corresponds to integration of a 2-D plane through the 4-D "planogram." The key step is that the integration along a set of parallel 2-D planes through the planogram, that is, backprojection of a plane of points, can be replaced by a 2-D section through the origin of the 4-D Fourier transform of the data. Backprojection can be performed as a sequence of Fourier transform operations, for faster implementation. In addition, we derive the central-section theorem for planogram format data, and also derive a reconstruction filter for both backprojection-filtering and filtered-backprojection reconstruction algorithms. With software-based Fourier transform calculations we provide preliminary comparisons of planogram backprojection to standard 3-D backprojection and demonstrate a reduction in computation time by a factor of approximately 15. PMID:15084067

  6. GPR data processing for 3D fracture mapping in a marble quarry (Thassos, Greece)

    Grandjean, G.; Gourry, J. C.

    1996-11-01

    Ground Penetrating Radar (GPR) has been successfully applied to detect and map fractures in marble quarries. The aim was to distinguish quickly intact marketable marble areas from fractured ones in order to improve quarry management. The GPR profiling method was chosen because it is non destructive and quickly provides a detailed image of the subsurface. It was performed in domains corresponding to future working areas in real quarry-exploitation conditions. Field surveying and data processing were adapted to the local characteristics of the fractures: E-W orientation, sub-vertical dip, and karst features. After the GPR profiles had been processed, using methods adapted from seismics (amplitude compensation, filtering and Fourier migration), the interpreted fractures from a 12 × 24 × 15 m zone were incorporated into a 3D model. Due to the low electrical conductivity of the marble, GPR provides penetration depths of about 8 and 15 m, and resolutions of about 1 and 5 cm for frequencies of 900 and 300 MHz respectively. The detection power thus seems to be sufficient to recommend use of this method. As requested by the quarriers, the 3D representation can be used directly by themselves to locate high- or low-quality marble areas. Comparison between the observed surface fractures and the fractures detected using GPR showed reasonable correlation.

  7. Critical bifurcation surfaces of 3D discrete dynamics

    Michael Sonis

    2000-01-01

    Full Text Available This paper deals with the analytical representation of bifurcations of each 3D discrete dynamics depending on the set of bifurcation parameters. The procedure of bifurcation analysis proposed in this paper represents the 3D elaboration and specification of the general algorithm of the n-dimensional linear bifurcation analysis proposed by the author earlier. It is proven that 3D domain of asymptotic stability (attraction of the fixed point for a given 3D discrete dynamics is bounded by three critical bifurcation surfaces: the divergence, flip and flutter surfaces. The analytical construction of these surfaces is achieved with the help of classical Routh–Hurvitz conditions of asymptotic stability. As an application the adjustment process proposed by T. Puu for the Cournot oligopoly model is considered in detail.

  8. Full Waveform 3D Synthetic Seismic Algorithm for 1D Layered Anelastic Models

    Schwaiger, H. F.; Aldridge, D. F.; Haney, M. M.

    2007-12-01

    Numerical calculation of synthetic seismograms for 1D layered earth models remains a significant aspect of amplitude-offset investigations, surface wave studies, microseismic event location approaches, and reflection interpretation or inversion processes. Compared to 3D finite-difference algorithms, memory demand and execution time are greatly reduced, enabling rapid generation of seismic data within workstation or laptop computational environments. We have developed a frequency-wavenumber forward modeling algorithm adapted to realistic 1D geologic media, for the purpose of calculating seismograms accurately and efficiently. The earth model consists of N layers bounded by two halfspaces. Each layer/halfspace is a homogeneous and isotropic anelastic (attenuative and dispersive) solid, characterized by a rectangular relaxation spectrum of absorption mechanisms. Compressional and shear phase speeds and quality factors are specified at a particular reference frequency. Solution methodology involves 3D Fourier transforming the three coupled, second- order, integro-differential equations for particle displacements to the frequency-horizontal wavenumber domain. An analytic solution of the resulting ordinary differential system is obtained. Imposition of welded interface conditions (continuity of displacement and stress) at all interfaces, as well as radiation conditions in the two halfspaces, yields a system of 6(N+1) linear algebraic equations for the coefficients in the ODE solution. An optimized inverse 2D Fourier transform to the space domain gives the seismic wavefield on a horizontal plane. Finally, three-component seismograms are obtained by accumulating frequency spectra at designated receiver positions on this plane, followed by a 1D inverse FFT from angular frequency ω to time. Stress-free conditions may be applied at the top or bottom interfaces, and seismic waves are initiated by force or moment density sources. Examples reveal that including attenuation

  9. Photopolymers in 3D printing applications

    Pandey, Ramji

    2014-01-01

    3D printing is an emerging technology with applications in several areas. The flexibility of the 3D printing system to use variety of materials and create any object makes it an attractive technology. Photopolymers are one of the materials used in 3D printing with potential to make products with better properties. Due to numerous applications of photopolymers and 3D printing technologies, this thesis is written to provide information about the various 3D printing technologies with particul...

  10. Natural fibre composites for 3D Printing

    Pandey, Kapil

    2015-01-01

    3D printing has been common option for prototyping. Not all the materials are suitable for 3D printing. Various studies have been done and still many are ongoing regarding the suitability of the materials for 3D printing. This thesis work discloses the possibility of 3D printing of certain polymer composite materials. The main objective of this thesis work was to study the possibility for 3D printing the polymer composite material composed of natural fibre composite and various different ...

  11. A Hybrid 3D Path Planning Algorithm for UAVs

    Ortiz-Arroyo, Daniel

    2016-01-01

    This paper presents a hybrid method for path planning in 3D spaces. We propose an improvement to a near-optimal 2D off-line algorithm and a flexible normalized on-line fuzzy controller to find shortest paths. Our method, targeted to low altitude domains, is simple and efficient. Our preliminary resu...

  12. A Hybrid 3D Path Planning Method for UAVs

    Ortiz-Arroyo, Daniel

    2015-01-01

    This paper presents a hybrid method for path planning in 3D spaces. We propose an improvement to a near-optimal 2D off-line algorithm and a flexible normalized on-line fuzzy controller to find shortest paths. Our method, targeted to low altitude domains, is simple and efficient. Our preliminary resu...

  13. 3D wavefront image formation for NIITEK GPR

    Soumekh, Mehrdad; Ton, Tuan; Howard, Pete

    2009-05-01

    The U.S. Department of Defense Humanitarian Demining (HD) Research and Development Program focuses on developing, testing, demonstrating, and validating new technology for immediate use in humanitarian demining operations around the globe. Beginning in the late 1990's, the U.S. Army Countermine Division funded the development of the NIITEK ground penetrating radar (GPR) for detection of anti-tank (AT) landmines. This work is concerned with signal processing algorithms to suppress sources of artifacts in the NIITEK GPR, and formation of three-dimensional (3D) imagery from the resultant data. We first show that the NIITEK GPR data correspond to a 3D Synthetic Aperture Radar (SAR) database. An adaptive filtering method is utilized to suppress ground return and self-induced resonance (SIR) signals that are generated by the interaction of the radar-carrying platform and the transmitted radar signal. We examine signal processing methods to improve the fidelity of imagery for this 3D SAR system using pre-processing methods that suppress Doppler aliasing as well as other side lobe leakage artifacts that are introduced by the radar radiation pattern. The algorithm, known as digital spotlighting, imposes a filtering scheme on the azimuth-compressed SAR data, and manipulates the resultant spectral data to achieve a higher PRF to suppress the Doppler aliasing. We also present the 3D version of the Fourier-based wavefront reconstruction, a computationally-efficient and approximation-free SAR imaging method, for image formation with the NIITEK 3D SAR database.

  14. Advanced 3-D Ultrasound Imaging

    Rasmussen, Morten Fischer

    been completed. This allows for precise measurements of organs dimensions and makes the scan more operator independent. Real-time 3-D ultrasound imaging is still not as widespread in use in the clinics as 2-D imaging. A limiting factor has traditionally been the low image quality achievable using...... and removes the need to integrate custom made electronics into the probe. A downside of row-column addressing 2-D arrays is the creation of secondary temporal lobes, or ghost echoes, in the point spread function. In the second part of the scientific contributions, row-column addressing of 2-D arrays...... was investigated. An analysis of how the ghost echoes can be attenuated was presented.Attenuating the ghost echoes were shown to be achieved by minimizing the first derivative of the apodization function. In the literature, a circular symmetric apodization function was proposed. A new apodization layout...

  15. Conducting Polymer 3D Microelectrodes

    Jenny Emnéus

    2010-12-01

    Full Text Available Conducting polymer 3D microelectrodes have been fabricated for possible future neurological applications. A combination of micro-fabrication techniques and chemical polymerization methods has been used to create pillar electrodes in polyaniline and polypyrrole. The thin polymer films obtained showed uniformity and good adhesion to both horizontal and vertical surfaces. Electrodes in combination with metal/conducting polymer materials have been characterized by cyclic voltammetry and the presence of the conducting polymer film has shown to increase the electrochemical activity when compared with electrodes coated with only metal. An electrochemical characterization of gold/polypyrrole electrodes showed exceptional electrochemical behavior and activity. PC12 cells were finally cultured on the investigated materials as a preliminary biocompatibility assessment. These results show that the described electrodes are possibly suitable for future in-vitro neurological measurements.

  16. Supernova Remnant in 3-D

    2009-01-01

    of the wavelength shift is related to the speed of motion, one can determine how fast the debris are moving in either direction. Because Cas A is the result of an explosion, the stellar debris is expanding radially outwards from the explosion center. Using simple geometry, the scientists were able to construct a 3-D model using all of this information. A program called 3-D Slicer modified for astronomical use by the Astronomical Medicine Project at Harvard University in Cambridge, Mass. was used to display and manipulate the 3-D model. Commercial software was then used to create the 3-D fly-through. The blue filaments defining the blast wave were not mapped using the Doppler effect because they emit a different kind of light synchrotron radiation that does not emit light at discrete wavelengths, but rather in a broad continuum. The blue filaments are only a representation of the actual filaments observed at the blast wave. This visualization shows that there are two main components to this supernova remnant: a spherical component in the outer parts of the remnant and a flattened (disk-like) component in the inner region. The spherical component consists of the outer layer of the star that exploded, probably made of helium and carbon. These layers drove a spherical blast wave into the diffuse gas surrounding the star. The flattened component that astronomers were unable to map into 3-D prior to these Spitzer observations consists of the inner layers of the star. It is made from various heavier elements, not all shown in the visualization, such as oxygen, neon, silicon, sulphur, argon and iron. High-velocity plumes, or jets, of this material are shooting out from the explosion in the plane of the disk-like component mentioned above. Plumes of silicon appear in the northeast and southwest, while those of iron are seen in the southeast and north. These jets were already known and Doppler velocity measurements have been made for these structures, but their orientation and

  17. Template-based CTA X-ray angio rigid registration of coronary arteries in frequency domain

    Aksoy, Timur; Demirci, Stefanie; Degertekin, Muzaffer; Navab, Nassir; Unal, Gozde

    2013-03-01

    This study performs 3D to 2D rigid registration of segmented pre-operative CTA coronary arteries with a single segmented intra-operative X-ray Angio frame in both frequency and spatial domains for real-time Angiography interventions by C-arm fluoroscopy. Most of the work on rigid registration in literature required a close initial- ization of poses and/or positions because of the abundance of local minima and high complexity that searching algorithms face. This study avoids such setbacks by transforming the projections into translation-invariant Fourier domain for estimating the 3D pose. First, template DRRs as candidate poses of 3D vessels of segmented CTA are produced by rotating the camera (image intensifier) around the DICOM angle values with a wide range as in C-arm setup. We have compared the 3D poses of template DRRs with the real X-ray after equalizing the scales (due to disparities in focal length distances) in 3 domains, namely Fourier magnitude, Fourier phase and Fourier polar. The best pose candidate was chosen by one of the highest similarity measures returned by the methods in these domains. It has been noted in literature that these methods are robust against noise and occlusion which was also validated by our results. Translation of the volume was then recovered by distance-map based BFGS optimization well suited to convex structure of our objective function without local minima due to distance maps. Final results were evaluated in 2D projection space rather than with actual values in 3D due to lack of ground truth, ill-posedness of the problem which we intend to address in future.

  18. 3D multiplexed immunoplasmonics microscopy

    Bergeron, Éric; Patskovsky, Sergiy; Rioux, David; Meunier, Michel

    2016-07-01

    Selective labelling, identification and spatial distribution of cell surface biomarkers can provide important clinical information, such as distinction between healthy and diseased cells, evolution of a disease and selection of the optimal patient-specific treatment. Immunofluorescence is the gold standard for efficient detection of biomarkers expressed by cells. However, antibodies (Abs) conjugated to fluorescent dyes remain limited by their photobleaching, high sensitivity to the environment, low light intensity, and wide absorption and emission spectra. Immunoplasmonics is a novel microscopy method based on the visualization of Abs-functionalized plasmonic nanoparticles (fNPs) targeting cell surface biomarkers. Tunable fNPs should provide higher multiplexing capacity than immunofluorescence since NPs are photostable over time, strongly scatter light at their plasmon peak wavelengths and can be easily functionalized. In this article, we experimentally demonstrate accurate multiplexed detection based on the immunoplasmonics approach. First, we achieve the selective labelling of three targeted cell surface biomarkers (cluster of differentiation 44 (CD44), epidermal growth factor receptor (EGFR) and voltage-gated K+ channel subunit KV1.1) on human cancer CD44+ EGFR+ KV1.1+ MDA-MB-231 cells and reference CD44- EGFR- KV1.1+ 661W cells. The labelling efficiency with three stable specific immunoplasmonics labels (functionalized silver nanospheres (CD44-AgNSs), gold (Au) NSs (EGFR-AuNSs) and Au nanorods (KV1.1-AuNRs)) detected by reflected light microscopy (RLM) is similar to the one with immunofluorescence. Second, we introduce an improved method for 3D localization and spectral identification of fNPs based on fast z-scanning by RLM with three spectral filters corresponding to the plasmon peak wavelengths of the immunoplasmonics labels in the cellular environment (500 nm for 80 nm AgNSs, 580 nm for 100 nm AuNSs and 700 nm for 40 nm × 92 nm AuNRs). Third, the developed

  19. Kuvaus 3D-tulostamisesta hammastekniikassa

    Munne, Mauri; Mustonen, Tuomas; Vähäjylkkä, Jaakko

    2013-01-01

    3D-tulostaminen kehittyy nopeasti ja yleistyy koko ajan. Tulostimien tarkkuuksien kehittyessä 3D-tulostus on ottamassa myös jalansijaa hammastekniikan alalta. Tämän opinnäytetyön tarkoituksena on kuvata 3D-tulostamisen tilaa hammastekniikassa. 3D-tulostaminen on Suomessa vielä melko harvinaista, joten opinnäytetyön tavoitteena on koota yhteen kaikki mahdollinen tieto liittyen 3D-tulostamiseen hammastekniikassa. Tavoitteena on myös 3D-tulostimen testaaminen käytännössä aina suun skannaami...

  20. NIF Ignition Target 3D Point Design

    Jones, O; Marinak, M; Milovich, J; Callahan, D

    2008-11-05

    We have developed an input file for running 3D NIF hohlraums that is optimized such that it can be run in 1-2 days on parallel computers. We have incorporated increasing levels of automation into the 3D input file: (1) Configuration controlled input files; (2) Common file for 2D and 3D, different types of capsules (symcap, etc.); and (3) Can obtain target dimensions, laser pulse, and diagnostics settings automatically from NIF Campaign Management Tool. Using 3D Hydra calculations to investigate different problems: (1) Intrinsic 3D asymmetry; (2) Tolerance to nonideal 3D effects (e.g. laser power balance, pointing errors); and (3) Synthetic diagnostics.

  1. 3D multiplexed immunoplasmonics microscopy.

    Bergeron, Éric; Patskovsky, Sergiy; Rioux, David; Meunier, Michel

    2016-07-21

    Selective labelling, identification and spatial distribution of cell surface biomarkers can provide important clinical information, such as distinction between healthy and diseased cells, evolution of a disease and selection of the optimal patient-specific treatment. Immunofluorescence is the gold standard for efficient detection of biomarkers expressed by cells. However, antibodies (Abs) conjugated to fluorescent dyes remain limited by their photobleaching, high sensitivity to the environment, low light intensity, and wide absorption and emission spectra. Immunoplasmonics is a novel microscopy method based on the visualization of Abs-functionalized plasmonic nanoparticles (fNPs) targeting cell surface biomarkers. Tunable fNPs should provide higher multiplexing capacity than immunofluorescence since NPs are photostable over time, strongly scatter light at their plasmon peak wavelengths and can be easily functionalized. In this article, we experimentally demonstrate accurate multiplexed detection based on the immunoplasmonics approach. First, we achieve the selective labelling of three targeted cell surface biomarkers (cluster of differentiation 44 (CD44), epidermal growth factor receptor (EGFR) and voltage-gated K(+) channel subunit KV1.1) on human cancer CD44(+) EGFR(+) KV1.1(+) MDA-MB-231 cells and reference CD44(-) EGFR(-) KV1.1(+) 661W cells. The labelling efficiency with three stable specific immunoplasmonics labels (functionalized silver nanospheres (CD44-AgNSs), gold (Au) NSs (EGFR-AuNSs) and Au nanorods (KV1.1-AuNRs)) detected by reflected light microscopy (RLM) is similar to the one with immunofluorescence. Second, we introduce an improved method for 3D localization and spectral identification of fNPs based on fast z-scanning by RLM with three spectral filters corresponding to the plasmon peak wavelengths of the immunoplasmonics labels in the cellular environment (500 nm for 80 nm AgNSs, 580 nm for 100 nm AuNSs and 700 nm for 40 nm × 92 nm AuNRs). Third

  2. ORMGEN3D, 3-D Crack Geometry FEM Mesh Generator

    1 - Description of program or function: ORMGEN3D is a finite element mesh generator for computational fracture mechanics analysis. The program automatically generates a three-dimensional finite element model for six different crack geometries. These geometries include flat plates with straight or curved surface cracks and cylinders with part-through cracks on the outer or inner surface. Mathematical or user-defined crack shapes may be considered. The curved cracks may be semicircular, semi-elliptical, or user-defined. A cladding option is available that allows for either an embedded or penetrating crack in the clad material. 2 - Method of solution: In general, one eighth or one-quarter of the structure is modelled depending on the configuration or option selected. The program generates a core of special wedge or collapsed prism elements at the crack front to introduce the appropriate stress singularity at the crack tip. The remainder of the structure is modelled with conventional 20-node iso-parametric brick elements. Element group I of the finite element model consists of an inner core of special crack tip elements surrounding the crack front enclosed by a single layer of conventional brick elements. Eight element divisions are used in a plane orthogonal to the crack front, while the number of element divisions along the arc length of the crack front is user-specified. The remaining conventional brick elements of the model constitute element group II. 3 - Restrictions on the complexity of the problem: Maxima of 5,500 nodes, 4 layers of clad elements

  3. 3D multiplexed immunoplasmonics microscopy

    Bergeron, Éric; Patskovsky, Sergiy; Rioux, David; Meunier, Michel

    2016-07-01

    Selective labelling, identification and spatial distribution of cell surface biomarkers can provide important clinical information, such as distinction between healthy and diseased cells, evolution of a disease and selection of the optimal patient-specific treatment. Immunofluorescence is the gold standard for efficient detection of biomarkers expressed by cells. However, antibodies (Abs) conjugated to fluorescent dyes remain limited by their photobleaching, high sensitivity to the environment, low light intensity, and wide absorption and emission spectra. Immunoplasmonics is a novel microscopy method based on the visualization of Abs-functionalized plasmonic nanoparticles (fNPs) targeting cell surface biomarkers. Tunable fNPs should provide higher multiplexing capacity than immunofluorescence since NPs are photostable over time, strongly scatter light at their plasmon peak wavelengths and can be easily functionalized. In this article, we experimentally demonstrate accurate multiplexed detection based on the immunoplasmonics approach. First, we achieve the selective labelling of three targeted cell surface biomarkers (cluster of differentiation 44 (CD44), epidermal growth factor receptor (EGFR) and voltage-gated K+ channel subunit KV1.1) on human cancer CD44+ EGFR+ KV1.1+ MDA-MB-231 cells and reference CD44- EGFR- KV1.1+ 661W cells. The labelling efficiency with three stable specific immunoplasmonics labels (functionalized silver nanospheres (CD44-AgNSs), gold (Au) NSs (EGFR-AuNSs) and Au nanorods (KV1.1-AuNRs)) detected by reflected light microscopy (RLM) is similar to the one with immunofluorescence. Second, we introduce an improved method for 3D localization and spectral identification of fNPs based on fast z-scanning by RLM with three spectral filters corresponding to the plasmon peak wavelengths of the immunoplasmonics labels in the cellular environment (500 nm for 80 nm AgNSs, 580 nm for 100 nm AuNSs and 700 nm for 40 nm × 92 nm AuNRs). Third, the developed

  4. Crowdsourcing Based 3d Modeling

    Somogyi, A.; Barsi, A.; Molnar, B.; Lovas, T.

    2016-06-01

    Web-based photo albums that support organizing and viewing the users' images are widely used. These services provide a convenient solution for storing, editing and sharing images. In many cases, the users attach geotags to the images in order to enable using them e.g. in location based applications on social networks. Our paper discusses a procedure that collects open access images from a site frequently visited by tourists. Geotagged pictures showing the image of a sight or tourist attraction are selected and processed in photogrammetric processing software that produces the 3D model of the captured object. For the particular investigation we selected three attractions in Budapest. To assess the geometrical accuracy, we used laser scanner and DSLR as well as smart phone photography to derive reference values to enable verifying the spatial model obtained from the web-album images. The investigation shows how detailed and accurate models could be derived applying photogrammetric processing software, simply by using images of the community, without visiting the site.

  5. 3D Inverse problem: Seawater intrusions

    Steklova, K.; Haber, E.

    2013-12-01

    Modeling of seawater intrusions (SWI) is challenging as it involves solving the governing equations for variable density flow, multiple time scales and varying boundary conditions. Due to the nonlinearity of the equations and the large aquifer domains, 3D computations are a costly process, particularly when solving the inverse SWI problem. In addition the heads and concentration measurements are difficult to obtain due to mixing, saline wedge location is sensitive to aquifer topography, and there is general uncertainty in initial and boundary conditions and parameters. Some of these complications can be overcome by using indirect geophysical data next to standard groundwater measurements, however, the inverse problem is usually simplified, e.g. by zonation for the parameters based on geological information, steady state substitution of the unknown initial conditions, decoupling the equations or reducing the amount of unknown parameters by covariance analysis. In our work we present a discretization of the flow and solute mass balance equations for variable groundwater (GW) flow. A finite difference scheme is to solve pressure equation and a Semi - Lagrangian method for solute transport equation. In this way we are able to choose an arbitrarily large time step without losing stability up to an accuracy requirement coming from the coupled character of the variable density flow equations. We derive analytical sensitivities of the GW model for parameters related to the porous media properties and also the initial solute distribution. Analytically derived sensitivities reduce the computational cost of inverse problem, but also give insight for maximizing information in collected data. If the geophysical data are available it also enables simultaneous calibration in a coupled hydrogeophysical framework. The 3D inverse problem was tested on artificial time dependent data for pressure and solute content coming from a GW forward model and/or geophysical forward model. Two

  6. DART : a 3D model for remote sensing images and radiative budget of earth surfaces

    Gastellu-Etchegorry, J.P.; Grau, E.; Lauret, N.

    2012-01-01

    Modeling the radiative behavior and the energy budget of land surfaces is relevant for many scientific domains such as the study of vegetation functioning with remotely acquired information. DART model (Discrete Anisotropic Radiative Transfer) is developed since 1992. It is one of the most complete 3D models in this domain. It simulates radiative transfer (R.T.) in the optical domain: 3D radiative budget and remote sensing images (i.e., radiance, reflectance, brightness temperature) of vegeta...

  7. 3D Servicescape Model: Atmospheric Qualities of Virtual Reality Retailing

    Aasim Munir Dad

    2016-02-01

    Full Text Available The purpose of this paper is to provide a 3D servicescape conceptual model which explores the potential effect of 3D virtual reality retail stores’ environment on shoppers' behaviour. Extensive review of literature within two different domains, namely: servicescape models, and retail atmospherics, was carried out in order to propose a conceptual model. Further, eight detailed interviews were conducted to confirm the stimulus dimension of the conceptual model. A 3D servicescape conceptual model is offered on the basis of stimulus-organism-dimension, which proposes that a 3D virtual reality retail (VRR store environment consists of physical, social, socially symbolic and natural dimensions. These dimensions are proposed to affect shoppers’ behaviour through the mediating variables of emotions (pleasure and arousal. An interrelationship between pleasure and arousal, as mediating variables, is also proposed. This research opens a number of new avenues for further research through the proposed model of shoppers’ behaviour in a VRR store environment. Further, a systematic taxonomy development of VRR store environment is attempted through this proposed model that may prove to be an important step in theory building. A comprehensive 3D service scape model along with a large number of propositions is made to define a 3D VRR store environment.

  8. Will 3D printers manufacture your meals?

    Bommel, K.J.C. van

    2013-01-01

    These days, 3D printers are laying down plastics, metals, resins, and other materials in whatever configurations creative people can dream up. But when the next 3D printing revolution comes, you'll be able to eat it.

  9. Eesti 3D jaoks kitsas / Virge Haavasalu

    Haavasalu, Virge

    2009-01-01

    Produktsioonifirma Digitaalne Sputnik: Kaur ja Kaspar Kallas tegelevad filmide produtseerimise ning 3D digitaalkaamerate tootearendusega (Silicon Imaging LLC). Vendade Kallaste 3D-kaamerast. Kommenteerib Eesti Filmi Sihtasutuse direktor Marge Liiske

  10. 3D Printing Making the Digital Real .

    Miss Prachi More

    2013-07-01

    Full Text Available 3D printing is quickly expanding field, with the popularity and uses for 3D printers growing every day. 3D printing can be used to prototype, create replacement parts, and is even versatile enough to print prostheses and medical implants. It will have a growing impact on our world, as more and more people gain access to these amazing machines.[1] In this article, we would like to attempt to give an introduction of the technology. 3Dimensions printing is a method of converting a virtual 3D model into a physical object. 3D printing is a category of rapid prototyping technology. 3D printers typically work by printing successive layers on top of the previous to build up a three dimensional object. 3D printing is a revolutionary method for creating 3D models with the use of inkjet technology.[7

  11. Sliding Adjustment for 3D Video Representation

    Galpin Franck

    2002-01-01

    Full Text Available This paper deals with video coding of static scenes viewed by a moving camera. We propose an automatic way to encode such video sequences using several 3D models. Contrary to prior art in model-based coding where 3D models have to be known, the 3D models are automatically computed from the original video sequence. We show that several independent 3D models provide the same functionalities as one single 3D model, and avoid some drawbacks of the previous approaches. To achieve this goal we propose a novel algorithm of sliding adjustment, which ensures consistency of successive 3D models. The paper presents a method to automatically extract the set of 3D models and associate camera positions. The obtained representation can be used for reconstructing the original sequence, or virtual ones. It also enables 3D functionalities such as synthetic object insertion, lightning modification, or stereoscopic visualization. Results on real video sequences are presented.

  12. 3D Flash LIDAR Space Laser Project

    National Aeronautics and Space Administration — Advanced Scientific Concepts, Inc. (ASC) is a small business that has developed 3D Flash LIDAR systems for space and terrestrial applications. 3D Flash LIDAR is...

  13. 3D strata objectsregistration for Malaysia within the LADM framework

    Zulkifli, N. A.; A. Abdul Rahman; Van Oosterom, P.J.M.

    2011-01-01

    This paper discusses 3D objects registration and modelling for cadastral objects within the Land Administration Domain Model (LADM) framework. A conceptual model as well as the associated technical model for the 2D and 3D objects have been proposed and developed for Malaysia. For both private and public land, the main subdivision of land in Malaysia is based on lots. In many continental European countries, ‘lot’ would be called ‘parcel’, but ‘parcel’ has other meaning in Malaysian context. Th...

  14. Imaging 3D strain field monitoring during hydraulic fracturing processes

    Chen, Rongzhang; Zaghloul, Mohamed A. S.; Yan, Aidong; Li, Shuo; Lu, Guanyi; Ames, Brandon C.; Zolfaghari, Navid; Bunger, Andrew P.; Li, Ming-Jun; Chen, Kevin P.

    2016-05-01

    In this paper, we present a distributed fiber optic sensing scheme to study 3D strain fields inside concrete cubes during hydraulic fracturing process. Optical fibers embedded in concrete were used to monitor 3D strain field build-up with external hydraulic pressures. High spatial resolution strain fields were interrogated by the in-fiber Rayleigh backscattering with 1-cm spatial resolution using optical frequency domain reflectometry. The fiber optics sensor scheme presented in this paper provides scientists and engineers a unique laboratory tool to understand the hydraulic fracturing processes in various rock formations and its impacts to environments.

  15. Large Scale 3D Image Reconstruction in Optical Interferometry

    Schutz, Antony; Mary, David; Thiébaut, Eric; Soulez, Ferréol

    2015-01-01

    Astronomical optical interferometers (OI) sample the Fourier transform of the intensity distribution of a source at the observation wavelength. Because of rapid atmospheric perturbations, the phases of the complex Fourier samples (visibilities) cannot be directly exploited , and instead linear relationships between the phases are used (phase closures and differential phases). Consequently, specific image reconstruction methods have been devised in the last few decades. Modern polychromatic OI instruments are now paving the way to multiwavelength imaging. This paper presents the derivation of a spatio-spectral ("3D") image reconstruction algorithm called PAINTER (Polychromatic opticAl INTErferometric Reconstruction software). The algorithm is able to solve large scale problems. It relies on an iterative process, which alternates estimation of polychromatic images and of complex visibilities. The complex visibilities are not only estimated from squared moduli and closure phases, but also from differential phase...

  16. 3D weak lensing with spin wavelets on the ball

    Leistedt, Boris; Kitching, Thomas D; Peiris, Hiranya V

    2015-01-01

    We construct the spin flaglet transform, a wavelet transform to analyse spin signals in three dimensions. Spin flaglets can probe signal content localised simultaneously in space and frequency and, moreover, are separable so that their angular and radial properties can be controlled independently. They are particularly suited to analysing of cosmological observations such as the weak gravitational lensing of galaxies. Such observations have a unique 3D geometrical setting since they are natively made on the sky, have spin angular symmetries, and are extended in the radial direction by additional distance or redshift information. Flaglets are constructed in the harmonic space defined by the Fourier-Laguerre transform, previously defined for scalar functions and extended here to signals with spin symmetries. Thanks to various sampling theorems, both the Fourier-Laguerre and flaglet transforms are theoretically exact when applied to band-limited signals. In other words, in numerical computations the only loss of...

  17. 3D Additive Manufacturing Symposium & Workshop

    Unver, Ertu; Taylor, Andrew

    2015-01-01

    The IMI /3M BIC 3D Additive Manufacturing Symposium and Workshop was hosted by 3M Buckley Innovation Centre on March 17th 2015. The event was attended by the major players in precision engineering, 3D additive design and manufacturing: Representatives from EOS, Renishaw, HK 3D Printing IMI Plc Senior Management team, design engineers, programmers and academics from the University of Huddersfield School of Art Design & Architecture, 3M Buckley centre 3D printing management and designers shared...

  18. Face Detection with a 3D Model

    Barbu, Adrian; Lay, Nathan; Gramajo, Gary

    2014-01-01

    This paper presents a part-based face detection approach where the spatial relationship between the face parts is represented by a hidden 3D model with six parameters. The computational complexity of the search in the six dimensional pose space is addressed by proposing meaningful 3D pose candidates by image-based regression from detected face keypoint locations. The 3D pose candidates are evaluated using a parameter sensitive classifier based on difference features relative to the 3D pose. A...

  19. 3D PHOTOGRAPHS IN CULTURAL HERITAGE

    Schuhr, W.; J. D. Lee; Kiel, St.

    2013-01-01

    This paper on providing "oo-information" (= objective object-information) on cultural monuments and sites, based on 3D photographs is also a contribution of CIPA task group 3 to the 2013 CIPA Symposium in Strasbourg. To stimulate the interest in 3D photography for scientists as well as for amateurs, 3D-Masterpieces are presented. Exemplary it is shown, due to their high documentary value ("near reality"), 3D photography support, e.g. the recording, the visualization, the interpret...

  20. 3D textiles for composite reinforcements

    Fangueiro, Raúl; Mingxing, Z.; Hong, H; Soutinho, Hélder Filipe Cunha; Gonçalves, P.; Araújo, Mário Duarte de

    2010-01-01

    This paper presents an overview on the last developments on 3D textile structures for composite reinforcements. The application of innovative 3D shaped weft-knitted preforms in GFRP tube joints is presented and discussed. Moreover, the mechanical behaviour of 3D hybrid basalt fiber reinforced composite material sis also presented and discussed.

  1. 3D modelling for multipurpose cadastre

    Abduhl Rahman, A.; Van Oosterom, P.J.M.; Hua, T.C.; Sharkawi, K.H.; Duncan, E.E.; Azri, N.; Hassan, M.I.

    2012-01-01

    Three-dimensional (3D) modelling of cadastral objects (such as legal spaces around buildings, around utility networks and other spaces) is one of the important aspects for a multipurpose cadastre (MPC). This paper describes the 3D modelling of the objects for MPC and its usage to the knowledge of 3D

  2. Evaluation of 3-D Power Distribution Synthesis Method for SMART Core Monitoring System

    A 3-dimensional power distribution synthesis method, named DPCM3D has been developed by KAERI. SMART core monitoring system, SCOMS adopted this method instead of Fourier expansion method for the digital monitoring system of conventional PWRs. The DPCM3D method produces a synthetic 3-D power distribution by coupling a neutronics code and measured in-core detector signals. In DPCM3D, instrumented node powers are determined from the detector powers by using power sharing factors and the un-instrumented node powers are determined by using power connection factors. A coefficient library for the 3-D power synthesis is functionalized as a function of the burnup, core power and control rod position. In this paper, performance of SCOMS 3-D power distribution synthesis method for SMART initial core was evaluated

  3. Fast Galerkin BEM for 3D Potential Theory

    Nintcheu Fata, Sylvain [ORNL

    2008-01-01

    This paper is concerned with the development of a fast spectral method for solving direct and indirect boundary integral equations in 3D-potential theory. Based on a Galerkin approximation and the Fast Fourier Transform, the proposed method is a generalization of the precorrected-FFT technique to handle not only single-layer potentials but also double-layer potentials and higher-order basis functions. Numerical examples utilizing piecewise linear shape functions are presented to illustrate the performance of the method.

  4. Comparison of diagnostic capability of macular ganglion cell complex and retinal nerve fiber layer among primary open angle glaucoma, ocular hypertension, and normal population using Fourier-domain optical coherence tomography and determining their functional correlation in Indian population

    Nabanita Barua

    2016-01-01

    Full Text Available Context: Analysis of diagnostic ability of macular ganglionic cell complex and retinal nerve fiber layer (RNFL in glaucoma. Aim: To correlate functional and structural parameters and comparing predictive value of each of the structural parameters using Fourier-domain (FD optical coherence tomography (OCT among primary open angle glaucoma (POAG and ocular hypertension (OHT versus normal population. Setting and Design: Single centric, cross-sectional study done in 234 eyes. Materials and Methods: Patients were enrolled in three groups: POAG, ocular hypertensive and normal (40 patients in each group. After comprehensive ophthalmological examination, patients underwent standard automated perimetry and FD-OCT scan in optic nerve head and ganglion cell mode. The relationship was assessed by correlating ganglion cell complex (GCC parameters with mean deviation. Results were compared with RNFL parameters. Statistical Analysis: Data were analyzed with SPSS, analysis of variance, t-test, Pearson′s coefficient, and receiver operating curve. Results: All parameters showed strong correlation with visual field (P 0.5 when compared with other parameters. None of the parameters showed significant diagnostic capability to detect OHT from normal population. In diagnosing early glaucoma from OHT and normal population, only inferior GCC had statistically significant AUC value (0.715. Conclusion: In this study, GCC and RNFL parameters showed equal predictive capability in perimetric versus normal group. In early stage, inferior GCC was the best parameter. In OHT population, single day cross-sectional imaging was not valuable.

  5. Comparison of diagnostic capability of macular ganglion cell complex and retinal nerve fiber layer among primary open angle glaucoma, ocular hypertension, and normal population using Fourier-domain optical coherence tomography and determining their functional correlation in Indian population

    Barua, Nabanita; Sitaraman, Chitra; Goel, Sonu; Chakraborti, Chandana; Mukherjee, Sonai; Parashar, Hemandra

    2016-01-01

    Context: Analysis of diagnostic ability of macular ganglionic cell complex and retinal nerve fiber layer (RNFL) in glaucoma. Aim: To correlate functional and structural parameters and comparing predictive value of each of the structural parameters using Fourier-domain (FD) optical coherence tomography (OCT) among primary open angle glaucoma (POAG) and ocular hypertension (OHT) versus normal population. Setting and Design: Single centric, cross-sectional study done in 234 eyes. Materials and Methods: Patients were enrolled in three groups: POAG, ocular hypertensive and normal (40 patients in each group). After comprehensive ophthalmological examination, patients underwent standard automated perimetry and FD-OCT scan in optic nerve head and ganglion cell mode. The relationship was assessed by correlating ganglion cell complex (GCC) parameters with mean deviation. Results were compared with RNFL parameters. Statistical Analysis: Data were analyzed with SPSS, analysis of variance, t-test, Pearson's coefficient, and receiver operating curve. Results: All parameters showed strong correlation with visual field (P 0.5) when compared with other parameters. None of the parameters showed significant diagnostic capability to detect OHT from normal population. In diagnosing early glaucoma from OHT and normal population, only inferior GCC had statistically significant AUC value (0.715). Conclusion: In this study, GCC and RNFL parameters showed equal predictive capability in perimetric versus normal group. In early stage, inferior GCC was the best parameter. In OHT population, single day cross-sectional imaging was not valuable. PMID:27221682

  6. 3-D Perspective Pasadena, California

    2000-01-01

    This perspective view shows the western part of the city of Pasadena, California, looking north towards the San Gabriel Mountains. Portions of the cities of Altadena and La Canada, Flintridge are also shown. The image was created from three datasets: the Shuttle Radar Topography Mission (SRTM) supplied the elevation data; Landsat data from November 11, 1986 provided the land surface color (not the sky) and U.S. Geological Survey digital aerial photography provides the image detail. The Rose Bowl, surrounded by a golf course, is the circular feature at the bottom center of the image. The Jet Propulsion Laboratory is the cluster of large buildings north of the Rose Bowl at the base of the mountains. A large landfill, Scholl Canyon, is the smooth area in the lower left corner of the scene. This image shows the power of combining data from different sources to create planning tools to study problems that affect large urban areas. In addition to the well-known earthquake hazards, Southern California is affected by a natural cycle of fire and mudflows. Wildfires strip the mountains of vegetation, increasing the hazards from flooding and mudflows for several years afterwards. Data such as shown on this image can be used to predict both how wildfires will spread over the terrain and also how mudflows will be channeled down the canyons. The Shuttle Radar Topography Mission (SRTM), launched on February 11, 2000, uses the same radar instrument that comprised the Spaceborne Imaging Radar-C/X-Band Synthetic Aperture Radar (SIR-C/X-SAR) that flew twice on the Space Shuttle Endeavour in 1994. The mission was designed to collect three dimensional measurements of the Earth's surface. To collect the 3-D data, engineers added a 60-meter-long (200-foot) mast, an additional C-band imaging antenna and improved tracking and navigation devices. The mission is a cooperative project between the National Aeronautics and Space Administration (NASA), the National Imagery and Mapping Agency

  7. Esiselvitys elintarvikkeiden 3D-tulostamisesta

    Teva, Arno

    2015-01-01

    Opinnäytetyön tavoitteena oli laatia esiselvitys 3D-tulostamisesta elintarvikealalla. 3D-tulostaminen on uusi ja jatkuvasti kehittyvä ala, joka tulee vaikuttamaan myös elintarvikealan kehittymiseen. Työn tarkoituksena oli selvittää elintarvikenäkökulmasta 3D-tulostamiseen liittyviä tekijöitä. Aiheen toimeksiantajana oli Hämeen ammattikorkeakoulu ja kohderyhmänä elintarvikealan Pk-yritykset. Opinnäytetyössä esitellään yleisimpiä 3D-tulostusmenetelmiä ja selvitetään 3D-tulostamista tietokone...

  8. PRIPRAVA MODELOV ZA 3D - TISK

    Črešnik, Igor

    2015-01-01

    V diplomskem delu predstavljamo pripravo modela na 3D-tisk. V prvem delu smo preleteli zgodovino tiska. Predstavili smo tehnologijo 3D-tiska ter različne tehnike tiskanja, ki jih uporabljajo določeni tiskalniki. V nadaljevanju smo pregledali različne tipe 3D-tiskalnikov, ki se uporabljajo za domačo ali komercialno uporabo ter izpostavili njihove prednosti in slabosti. V zadnjem delu diplomskega dela smo na praktičnem primeru 3D-modela hiše prikazali proces priprave modela za 3D-tisk. Pri delu...

  9. 3D-tulostimien tutkiminen painotalolle

    Toivonen, Aleksi

    2014-01-01

    Opinnäytetyön tavoitteena oli perehtyä 3D-tulostamiseen ja tutkia painotaloon sopivia 3D-tulostimia ja 3D-tulostamiseen liittyviä tekniikoita. Opinnäytetyön tavoitteena oli myös pohtia painotalolle mahdollisia 3D-tulostamiseen liittyviä tuotekonsepteja yrityksille ja yksityisille kuluttajille. Painoalan yrityksen tarkoituksena on sijoittaa lähitulevaisuudessa 3D-tulostimeen, joten opinnäytetyö oli ajankohtainen tutkimustyö yritykselle. Opinnäytetyön toimeksiantajana toimi painoalan yritys. ...

  10. BUILDING A HOMEMADE 3D PRINTER

    Tunc, Baran

    2015-01-01

    3D printing has been attracted much attention around the world due to its high potential of new application fields. In this respect, developing and inventing new filament materials for 3D printers or new techniques of 3D printing are the main interest of the many materials scientists. This paper reports a comprehensive overview of 3D printing followed by a summary of my ongoing study of building a composite homemade 3D printer. At this stage of this study, a CNC router was successfully conver...

  11. 3D Printing our future: Now

    Taylor, Andrew; Unver, Ertu

    2015-01-01

    This 3D Printing our Future:Now talk and visual presentation was given to delegates at the IMI 3D Workshop held at 3M Buckley Innovation Centre on 17th March 2015. The event was hosted by 3Mbuckley Innovation Centre for IMI plc a global engineering company, 3M, and leading 3D additive manufacturing technology providers: EOS, Renishaw and HK 3D printing to disseminate and share their experience on the latest 3D additive design and manufacturing technologies available to the engineering an...

  12. Investigating Mobile Stereoscopic 3D Touchscreen Interaction

    Colley, Ashley; Hakkila, Jonna; SCHOENING, Johannes; Posti, Maaret

    2013-01-01

    3D output is no longer limited to large screens in cinemas or living rooms. Nowadays more and more mobile devices are equipped with autostereoscopic 3D (S3D) touchscreens. As a consequence interaction with 3D content now also happens whilst users are on the move. In this paper we carried out a user study with 27 participants to assess how mobile interaction, i.e. whilst walking, with mobile S3D devices, differs from interaction with 2D mobile touchscreens. We investigate the difference in tou...

  13. ViHAP3D - Final report

    Scopigno, Roberto

    2005-01-01

    Nearly all of our cultural heritage is inherently three-dimensional. Recent hard- and software developments enabled 3D computer graphics to be one of the most powerful means to represent complex data sets. The ViHAP3D project (ViHAP3D is an acronym for Virtual Heritage - High Quality 3D Acquisition and Presentation) aimed therefore at preserving, presenting, accessing, and promoting cultural heritage using interactive, high-quality 3D graphics. The vision of the project was to create an exact...

  14. Wafer level 3-D ICs process technology

    Tan, Chuan Seng; Reif, L Rafael

    2009-01-01

    This book focuses on foundry-based process technology that enables the fabrication of 3-D ICs. The core of the book discusses the technology platform for pre-packaging wafer lever 3-D ICs. However, this book does not include a detailed discussion of 3-D ICs design and 3-D packaging. This is an edited book based on chapters contributed by various experts in the field of wafer-level 3-D ICs process technology. They are from academia, research labs and industry.

  15. View-based 3-D object retrieval

    Gao, Yue

    2014-01-01

    Content-based 3-D object retrieval has attracted extensive attention recently and has applications in a variety of fields, such as, computer-aided design, tele-medicine,mobile multimedia, virtual reality, and entertainment. The development of efficient and effective content-based 3-D object retrieval techniques has enabled the use of fast 3-D reconstruction and model design. Recent technical progress, such as the development of camera technologies, has made it possible to capture the views of 3-D objects. As a result, view-based 3-D object retrieval has become an essential but challenging res

  16. MAXWELL3, 3-D FEM Electromagnetism

    1 - Description of program or function: MAXWELL3 is a linear, time domain, finite element code designed for simulation of electromagnetic fields interacting with three-dimensional objects. The simulation region is discretized into 6-sided, 8-nodded elements which need not form a logically regular grid. Scatterers may be perfectly conducting or dielectric. Restart capability and a Muer-type radiating boundary are included. MAXWELL3 can be run in a two-dimensional mode or on infinitesimally thin geometries. The output of time histories on surfaces, or shells, in addition to volumes, is allowed. Two post-processors are included - HIST2XY, which splits the MAXWELL3 history file into simple xy data files, and FFTABS, which performs fast Fourier transformations on the xy data. 2 - Method of solution: The numerical method requires that the model be discretized with a mesh generator. MAXWELL3 then uses the mesh and computes the time domain electric and magnetic fields by integrating Maxwell's divergence-free curl equations over time. The output from MAXWELL3 can then be used with a post-processor to get the desired information in a graphical form. The explicit time integration is done with a leap-frog technique that alternates evaluating the electric and magnetic fields at half time steps. This allows for centered time differencing accurate in second order. The algorithm is naturally robust and requires no parameters. 3 - Restrictions on the complexity of the problem: MAXWELL3 has no mesh generation capabilities. Anisotropic, nonlinear, and magnetic materials cannot be modeled. Material interfaces only account for dielectric changes and neglect any surface charges that would be present at the surface of a partially conducting material. The radiation boundary algorithm is only accurate for normally incident fields and becomes less accurate as the angle of incidence increases. Thus, only models using scattered fields should use the radiation boundary. This limits MAXWELL3's

  17. Web-based interactive visualization of 3D video mosaics using X3D standard

    CHON Jaechoon; LEE Yang-Won; SHIBASAKI Ryosuke

    2006-01-01

    We present a method of 3D image mosaicing for real 3D representation of roadside buildings, and implement a Web-based interactive visualization environment for the 3D video mosaics created by 3D image mosaicing. The 3D image mosaicing technique developed in our previous work is a very powerful method for creating textured 3D-GIS data without excessive data processing like the laser or stereo system. For the Web-based open access to the 3D video mosaics, we build an interactive visualization environment using X3D, the emerging standard of Web 3D. We conduct the data preprocessing for 3D video mosaics and the X3D modeling for textured 3D data. The data preprocessing includes the conversion of each frame of 3D video mosaics into concatenated image files that can be hyperlinked on the Web. The X3D modeling handles the representation of concatenated images using necessary X3D nodes. By employing X3D as the data format for 3D image mosaics, the real 3D representation of roadside buildings is extended to the Web and mobile service systems.

  18. Case study: Beauty and the Beast 3D: benefits of 3D viewing for 2D to 3D conversion

    Handy Turner, Tara

    2010-02-01

    From the earliest stages of the Beauty and the Beast 3D conversion project, the advantages of accurate desk-side 3D viewing was evident. While designing and testing the 2D to 3D conversion process, the engineering team at Walt Disney Animation Studios proposed a 3D viewing configuration that not only allowed artists to "compose" stereoscopic 3D but also improved efficiency by allowing artists to instantly detect which image features were essential to the stereoscopic appeal of a shot and which features had minimal or even negative impact. At a time when few commercial 3D monitors were available and few software packages provided 3D desk-side output, the team designed their own prototype devices and collaborated with vendors to create a "3D composing" workstation. This paper outlines the display technologies explored, final choices made for Beauty and the Beast 3D, wish-lists for future development and a few rules of thumb for composing compelling 2D to 3D conversions.

  19. 3D laptop for defense applications

    Edmondson, Richard; Chenault, David

    2012-06-01

    Polaris Sensor Technologies has developed numerous 3D display systems using a US Army patented approach. These displays have been developed as prototypes for handheld controllers for robotic systems and closed hatch driving, and as part of a TALON robot upgrade for 3D vision, providing depth perception for the operator for improved manipulation and hazard avoidance. In this paper we discuss the prototype rugged 3D laptop computer and its applications to defense missions. The prototype 3D laptop combines full temporal and spatial resolution display with the rugged Amrel laptop computer. The display is viewed through protective passive polarized eyewear, and allows combined 2D and 3D content. Uses include robot tele-operation with live 3D video or synthetically rendered scenery, mission planning and rehearsal, enhanced 3D data interpretation, and simulation.

  20. User-centered 3D geovisualisation

    Nielsen, Anette Hougaard

    2004-01-01

    3D Geovisualisation is a multidisciplinary science mainly utilizing geographically related data, developing software systems for 3D visualisation and producing relevant models. In this paper the connection between geoinformation stored as 3D objects and the end user is of special interest....... In a broader perspective, the overall aim is to develop a language in 3D Geovisualisation gained through usability projects and the development of a theoretical background. A conceptual level of user-centered 3D Geovisualisation is introduced by applying a categorisation originating from Virtual Reality....... The conceptual level is used to structure and organise user-centered 3D Geovisualisation into four categories: representation, rendering, interface and interaction. The categories reflect a process of development of 3D Geovisualisation where objects can be represented verisimilar to the real world...

  1. 3D Chaotic Functions for Image Encryption

    Pawan N. Khade

    2012-05-01

    Full Text Available This paper proposes the chaotic encryption algorithm based on 3D logistic map, 3D Chebyshev map, and 3D, 2D Arnolds cat map for color image encryption. Here the 2D Arnolds cat map is used for image pixel scrambling and 3D Arnolds cat map is used for R, G, and B component substitution. 3D Chebyshev map is used for key generation and 3D logistic map is used for image scrambling. The use of 3D chaotic functions in the encryption algorithm provide more security by using the, shuffling and substitution to the encrypted image. The Chebyshev map is used for public key encryption and distribution of generated private keys.

  2. 3D periodic dielectric composite homogenization based on the Generalized Source Method

    Shcherbakov, Alexey A.; Tishchenko, Alexandre V.

    2015-01-01

    The article encloses a new Fourier space method for rigorous optical simulation of 3D periodic dielectric structures. The method relies upon rigorous solution of Maxwell's equations in complex composite structures by the Generalized Source Method. Extremely fast GPU enabled calculations provide a possibility for an efficient search of eigenmodes in 3D periodic complex structures on the basis of rigorously obtained resonant electromagnetic response. The method is applied to the homogenization ...

  3. Automatic 3-D Optical Detection on Orientation of Randomly Oriented Industrial Parts for Rapid Robotic Manipulation

    Liang-Chia Chen; Manh-Trung Le; Xuan-Loc Nguyen

    2012-01-01

    This paper proposes a novel method employing a developed 3-D optical imaging and processing algorithm for accurate classification of an object’s surface characteristics in robot pick and place manipulation. In the method, 3-D geometry of industrial parts can be rapidly acquired by the developed one-shot imaging optical probe based on Fourier Transform Profilometry (FTP) by using digital-fringe projection at a camera’s maximum sensing speed. Following this, the acquired range image can be effe...

  4. 3D model of amphioxus steroid receptor complexed with estradiol

    The origins of signaling by vertebrate steroids are not fully understood. An important advance was the report that an estrogen-binding steroid receptor [SR] is present in amphioxus, a basal chordate with a similar body plan as vertebrates. To investigate the evolution of estrogen-binding to steroid receptors, we constructed a 3D model of amphioxus SR complexed with estradiol. This 3D model indicates that although the SR is activated by estradiol, some interactions between estradiol and human ERα are not conserved in the SR, which can explain the low affinity of estradiol for the SR. These differences between the SR and ERα in the steroid-binding domain are sufficient to suggest that another steroid is the physiological regulator of the SR. The 3D model predicts that mutation of Glu-346 to Gln will increase the affinity of testosterone for amphioxus SR and elucidate the evolution of steroid-binding to nuclear receptors.

  5. Research progress on discretization of fractional Fourier transform

    TAO Ran; ZHANG Feng; WANG Yue

    2008-01-01

    As the fractional Fourier transform has attracted a considerable amount of atten-tion in the area of optics and signal processing,the discretization of the fractional Fourier transform becomes vital for the application of the fractional Fourier trans-form.Since the discretization of the fractional Fourier transform cannot be obtained by directly sampling in time domain and the fractional Fourier domain,the discre-tization of the fractional Fourier transform has been investigated recently.A sum-mary of discretizations of the fractional Fourier transform developed in the last nearly two decades is presented in this paper.The discretizations include sampling in the fractional Fourier domain,discrete-time fractional Fourier transform,frac-tional Fourier series,discrete fractional Fourier transform (including 3 main types:linear combination-type;sampling-type;and eigen decomposition-type),and other discrete fractional signal transform.It is hoped to offer a doorstep for the readers who are interested in the fractional Fourier transform.

  6. Content adaptive sparse illumination for Fourier ptychography

    Bian, Liheng; Situ, Guohai; Zheng, Guoan; Chen, Feng; Dai, Qionghai

    2014-01-01

    Fourier Ptychography (FP) is a recently proposed technique for large field of view and high resolution imaging. Specifically, FP captures a set of low resolution images under angularly varying illuminations and stitches them together in Fourier domain. One of FP's main disadvantages is its long capturing process due to the requisite large number of incident illumination angles. In this letter, utilizing the sparsity of natural images in Fourier domain, we propose a highly efficient method termed as AFP, which applies content adaptive sparse illumination for Fourier ptychography by capturing the most informative parts of the scene's spatial spectrum. We validate the effectiveness and efficiency of the reported framework with both simulations and real experiments. Results show that the proposed AFP could shorten the acquisition time of conventional FP by around 30%-60%.

  7. 3-D Technology Approaches for Biological Ecologies

    Liu, Liyu; Austin, Robert; U. S-China Physical-Oncology Sciences Alliance (PS-OA) Team

    Constructing three dimensional (3-D) landscapes is an inevitable issue in deep study of biological ecologies, because in whatever scales in nature, all of the ecosystems are composed by complex 3-D environments and biological behaviors. Just imagine if a 3-D technology could help complex ecosystems be built easily and mimic in vivo microenvironment realistically with flexible environmental controls, it will be a fantastic and powerful thrust to assist researchers for explorations. For years, we have been utilizing and developing different technologies for constructing 3-D micro landscapes for biophysics studies in in vitro. Here, I will review our past efforts, including probing cancer cell invasiveness with 3-D silicon based Tepuis, constructing 3-D microenvironment for cell invasion and metastasis through polydimethylsiloxane (PDMS) soft lithography, as well as explorations of optimized stenting positions for coronary bifurcation disease with 3-D wax printing and the latest home designed 3-D bio-printer. Although 3-D technologies is currently considered not mature enough for arbitrary 3-D micro-ecological models with easy design and fabrication, I hope through my talk, the audiences will be able to sense its significance and predictable breakthroughs in the near future. This work was supported by the State Key Development Program for Basic Research of China (Grant No. 2013CB837200), the National Natural Science Foundation of China (Grant No. 11474345) and the Beijing Natural Science Foundation (Grant No. 7154221).

  8. FROM 3D MODEL DATA TO SEMANTICS

    My Abdellah Kassimi

    2012-01-01

    Full Text Available The semantic-based 3D models retrieval systems have become necessary since the increase of 3D modelsdatabases. In this paper, we propose a new method for the mapping problem between 3D model data andsemantic data involved in semantic based retrieval for 3D models given by polygonal meshes. First, wefocused on extracting invariant descriptors from the 3D models and analyzing them to efficient semanticannotation and to improve the retrieval accuracy. Selected shape descriptors provide a set of termscommonly used to describe visually a set of objects using linguistic terms and are used as semanticconcept to label 3D model. Second, spatial relationship representing directional, topological anddistance relationships are used to derive other high-level semantic features and to avoid the problem ofautomatic 3D model annotation. Based on the resulting semantic annotation and spatial concepts, anontology for 3D model retrieval is constructed and other concepts can be inferred. This ontology is usedto find similar 3D models for a given query model. We adopted the query by semantic example approach,in which the annotation is performed mostly automatically. The proposed method is implemented in our3D search engine (SB3DMR, tested using the Princeton Shape Benchmark Database.

  9. Parallel PAB3D: Experiences with a Prototype in MPI

    Guerinoni, Fabio; Abdol-Hamid, Khaled S.; Pao, S. Paul

    1998-01-01

    PAB3D is a three-dimensional Navier Stokes solver that has gained acceptance in the research and industrial communities. It takes as computational domain, a set disjoint blocks covering the physical domain. This is the first report on the implementation of PAB3D using the Message Passing Interface (MPI), a standard for parallel processing. We discuss briefly the characteristics of tile code and define a prototype for testing. The principal data structure used for communication is derived from preprocessing "patching". We describe a simple interface (COMMSYS) for MPI communication, and some general techniques likely to be encountered when working on problems of this nature. Last, we identify levels of improvement from the current version and outline future work.

  10. 3-D DYNAMIC RESPONSE OF TRANSVERSELY ISOTROPIC SATURATED SOILS

    WANG Xiao-gang; HUANG Yi

    2005-01-01

    A study on dynamic response of transversely isotropic saturated poroelastic media under a circular non-axisymmetrical harmonic source has been presented by Huang Yi et al.using the technique of Fourier expansion and Hankel transform. However, the method may not always be valid. The work is extended to the general case being in the rectangular coordinate. The purpose is to study the 3-d dynamic response of transversely isotropic saturated soils under a general source distributing in arbitrary rectangular zoon on the medium surface. Based on Biot's theory for fluid-saturated porous media, the 3-d wave motion equations in rectangular coordinate for transversely isotropic saturated poroelastic media were transformed into the two uncoupling governing differential equations of 6-order and 2-order respectively by means of the displacement functions. Then, using the technique of double Fourier transform, the governing differential equations were easily solved. Integral solutions of soil skeleton displacements and pore pressure as well as the total stresses for poroelastic media were obtained. Furthermore, a systematic study on half-space problem in saturated soils was performed. Integral solutions for surface displacements under the general harmonic source distributing on arbitrary surface zone,considering both case of drained surface and undrained surface,were presented.

  11. Principles of Fourier analysis

    Howell, Kenneth B

    2001-01-01

    Fourier analysis is one of the most useful and widely employed sets of tools for the engineer, the scientist, and the applied mathematician. As such, students and practitioners in these disciplines need a practical and mathematically solid introduction to its principles. They need straightforward verifications of its results and formulas, and they need clear indications of the limitations of those results and formulas.Principles of Fourier Analysis furnishes all this and more. It provides a comprehensive overview of the mathematical theory of Fourier analysis, including the development of Fourier series, "classical" Fourier transforms, generalized Fourier transforms and analysis, and the discrete theory. Much of the author''s development is strikingly different from typical presentations. His approach to defining the classical Fourier transform results in a much cleaner, more coherent theory that leads naturally to a starting point for the generalized theory. He also introduces a new generalized theory based ...

  12. 3D Systems” ‘Stuck in the Middle’ of the 3D Printer Boom?

    A. Hoffmann (Alan)

    2014-01-01

    textabstract3D Systems, the pioneer of 3D printing, predicted a future where "kids from 8 to 80" could design and print their ideas at home. By 2013, 9 years after the creation of the first working 3D printer, there were more than 30 major 3D printing companies competing for market share. 3DS and it

  13. EXPLORING CULTURAL HERITAGE RESOURCES IN A 3D COLLABORATIVE ENVIRONMENT

    A. Respaldiza; M. Wachowicz; Vázquez Hoehne, A.

    2012-01-01

    Cultural heritage is a complex and diverse concept, which brings together a wide domain of information. Resources linked to a cultural heritage site may consist of physical artefacts, books, works of art, pictures, historical maps, aerial photographs, archaeological surveys and 3D models. Moreover, all these resources are listed and described by a set of a variety of metadata specifications that allow their online search and consultation on the most basic characteristics of them. Some ex...

  14. On the positivity of Fourier transforms

    Giraud, Bertrand G

    2014-01-01

    Characterizing in a constructive way the set of real functions whose Fourier transforms are positive appears to be yet an open problem. Some sufficient conditions are known but they are far from being exhaustive. We propose two constructive sets of necessary conditions for positivity of the Fourier transforms and test their ability of constraining the positivity domain. One uses analytic continuation and Jensen inequalities and the other deals with Toeplitz determinants and the Bochner theorem. Applications are discussed, including the extension to the two-dimensional Fourier-Bessel transform and the problem of positive reciprocity, i.e. positive functions with positive transforms.

  15. 3D-tulostus : case Printrbot

    Arvekari, Lassi

    2013-01-01

    Opinnäytetyön tavoitteena on selvittää 3D-tulostustekniikan perusteita ja 3D-tulostuksen nykytilannetta. 3D-tulostukseen sopivien mallien luomista tutkitaan ja mallin tekemiseen on etsitty toimivia ohjesääntöjä. Tärkeä osa työtä on tutkia mitä vaiheita 3D-tulostimen hankinnassa kotikäyttöön tulee vastaan. Käytännön kokeita varten opinnäytetyössä on case Printrbot, jossa on tutustuttu edulliseen 3D-tulostuslaitteeseen kokoonpanosta lähtien. Työn kuluessa selvisi että edulliset 3D-tulos...

  16. Identification of the transition arrays 3d74s-3d74p in Br X and 3d64s-3d64p in Br XI

    We report a beam-foil study of multiply ionized bromine in the region 400-1300A, performed with 6 and 8 MeV Br ions from a tandem accelerator. At these energies transitions belonging to Fe-like Br X and Mn-like Br XI are expected to be prominent. We have identified 31 lines as 3d74s-3d74p transitions in Br X, from which 16 levels of the previously unknown 3d74s configuration could be established. We have also added 6 new 3d74p levels to the 99 previously known. For Br XI we have classified 9 lines as 3d64s-3d64p combinations. The line identifications have been corroborated by isoelectronic comparisons and theoretical calculations using the superposition-of-configurations technique. (orig.)

  17. 3D Dynamic Echocardiography with a Digitizer

    Oshiro, Osamu; Matani, Ayumu; Chihara, Kunihiro

    1998-05-01

    In this paper,a three-dimensional (3D) dynamic ultrasound (US) imaging system,where a US brightness-mode (B-mode) imagetriggered with an R-wave of electrocardiogram (ECG)was obtained with an ultrasound diagnostic deviceand the location and orientation of the US probewere simultaneously measured with a 3D digitizer, is described.The obtained B-mode imagewas then projected onto a virtual 3D spacewith the proposed interpolation algorithm using a Gaussian operator.Furthermore, a 3D image was presented on a cathode ray tube (CRT)and stored in virtual reality modeling language (VRML).We performed an experimentto reconstruct a 3D heart image in systole using this system.The experimental results indicatethat the system enables the visualization ofthe 3D and internal structure of a heart viewed from any angleand has potential for use in dynamic imaging,intraoperative ultrasonography and tele-medicine.

  18. Rubber Impact on 3D Textile Composites

    Heimbs, Sebastian; Van Den Broucke, Björn; DUPLESSIS KERGOMARD, Yann; Dau, Frédéric; MALHERBE, Benoit

    2012-01-01

    A low velocity impact study of aircraft tire rubber on 3D textile-reinforced composite plates was performed experimentally and numerically. In contrast to regular unidirectional composite laminates, no delaminations occur in such a 3D textile composite. Yarn decohesions, matrix cracks and yarn ruptures have been identified as the major damage mechanisms under impact load. An increase in the number of 3D warp yarns is proposed to improve the impact damage resistance. The characteristic o...

  19. Spatial data modelling for 3D GIS

    Abdul-Rahman, Alias

    2007-01-01

    This book covers fundamental aspects of spatial data modelling specifically on the aspect of three-dimensional (3D) modelling and structuring. Realisation of ""true"" 3D GIS spatial system needs a lot of effort, and the process is taking place in various research centres and universities in some countries. The development of spatial data modelling for 3D objects is the focus of this book.

  20. MMDB: 3D structures and macromolecular interactions

    Madej, Thomas; Addess, Kenneth J.; Fong, Jessica H.; Geer, Lewis Y.; Geer, Renata C.; Lanczycki, Christopher J; Liu, Chunlei; Lu, Shennan; Marchler-Bauer, Aron; Panchenko, Anna R.; Chen, Jie; Thiessen, Paul A; Wang, Yanli; Zhang, Dachuan; Bryant, Stephen H.

    2011-01-01

    Close to 60% of protein sequences tracked in comprehensive databases can be mapped to a known three-dimensional (3D) structure by standard sequence similarity searches. Potentially, a great deal can be learned about proteins or protein families of interest from considering 3D structure, and to this day 3D structure data may remain an underutilized resource. Here we present enhancements in the Molecular Modeling Database (MMDB) and its data presentation, specifically pertaining to biologically...

  1. Volume-Rendering-Based Interactive 3D Measurement for Quantitative Analysis of 3D Medical Images

    Yakang Dai; Jian Zheng; Yuetao Yang; Duojie Kuai; Xiaodong Yang

    2013-01-01

    3D medical images are widely used to assist diagnosis and surgical planning in clinical applications, where quantitative measurement of interesting objects in the image is of great importance. Volume rendering is widely used for qualitative visualization of 3D medical images. In this paper, we introduce a volume-rendering-based interactive 3D measurement framework for quantitative analysis of 3D medical images. In the framework, 3D widgets and volume clipping are integrated with volume render...

  2. 3D Printing Making the Digital Real .

    Miss Prachi More

    2013-01-01

    3D printing is quickly expanding field, with the popularity and uses for 3D printers growing every day. 3D printing can be used to prototype, create replacement parts, and is even versatile enough to print prostheses and medical implants. It will have a growing impact on our world, as more and more people gain access to these amazing machines.[1] In this article, we would like to attempt to give an introduction of the technology. 3Dimensions printing is a method of converting a virtual 3D mod...

  3. 3D-tulostuksen viipalointiohjelmien vertailu

    Virolainen, Ville

    2015-01-01

    Opinnäytetyön tavoitteena on selventää 3D-tulostamisen prosessia yksityisen käyttäjän näkökulmasta sekä luoda testitulostuksia, joiden perusteella pystytään vertailemaan prosessissa käytettävien viipalointiohjelmien toimintaa keskenään. Työssä perehdytään aluksi 3D-tulostuksen teoriataustaan, jonka jälkeen suoritetaan 3D-tulostimella testitulostukset käyttäen kolmea eri viipalointiohjelmaa. 3D-tulostamisella tarkoitetaan prosessia, jonka tarkoituksena on luoda kolmiulotteinen objekti käyt...

  4. Illustrating Mathematics using 3D Printers

    Knill, Oliver; Slavkovsky, Elizabeth

    2013-01-01

    3D printing technology can help to visualize proofs in mathematics. In this document we aim to illustrate how 3D printing can help to visualize concepts and mathematical proofs. As already known to educators in ancient Greece, models allow to bring mathematics closer to the public. The new 3D printing technology makes the realization of such tools more accessible than ever. This is an updated version of a paper included in book Low-Cost 3D Printing for science, education and Sustainable Devel...

  5. BIM tietomalli ja 3D-tulostus

    Myllykoski, Joonas; Palonen, Teemu

    2015-01-01

    Tämän opinnäytetyön tavoitteena oli selvittää miten Tekla Structures ohjelmalla luotu 3D-malli saadaan tulostettua koulun 3D-tulostimella sekä tutkittiin voidaanko Tekla Structuresin ominaisuuksia hyödyntää 3D-tulostamisessa ja miten tulostus onnistuu autocadilla. Selvitimme myös mahdollisia 3D-tulostusteknologian sovelluksia tulevaisuuden rakennustuotannossa ja sen näkymiä rakennusteollisuudessa sekä erilaisia tulostus menetelmiä joita voitaisiin mahdollisesti hyödyntää rakennusteollisuudess...

  6. A 3d game in python

    Xu, Minghui

    2014-01-01

    3D game has widely been accepted and loved by many game players. More and more different kinds of 3D games were developed to feed people’s needs. The most common programming language for development of 3D game is C++ nowadays. Python is a high-level scripting language. It is simple and clear. The concise syntax could speed up the development cycle. This project was to develop a 3D game using only Python. The game is about how a cat lives in the street. In order to live, the player need...

  7. Interaktiivinen 3D HTML5-selaimissa

    Aaltonen, Jani

    2013-01-01

    Insinöörityön tavoitteena oli tutkia Metropolia Ammattikorkeakoulun mahdollisuuksia tuottaa interaktiivista 3D:tä verkkoselaimiin WebGL:n avulla ja käyttäen ammattikorkeakoulun 3D-mallinnusohjelmaa. WebGL on ohjelmointirajapinta, jolla saadaan luotua 3D-grafiikkaa verkkoselaimeen ilman ylimääräisiä liitännäisiä. Insinöörityö tehtiin Metropolia Ammattikorkeakoululle, ja sen tuloksia käytetään sekä osana opetusta että mahdollisesti 3D-sisällön tuottamiseen ammattikorkeakoulua varten. Työssä...

  8. Calibration for 3D Structured Light Measurement

    2007-01-01

    A calibration procedure was developed for three-dimensional(3D) binocular structured light measurement systems. In virtue of a specially designed pattern, matching points in stereo images are extracted. And then sufficient 3D space points are obtained through pairs of images with the intrinsic and extrinsic parameters of each camera estimated prior and consequently some lights are calibrated by means of multi point fitting. Finally, a mathematical model is applied to interpolate and approximate all dynamic scanning lights based on geometry. The process of calibration method is successfully used in the binocular 3D measurement system based on structured lights and the 3D reconstruction results are satisfying.

  9. Getting started in 3D with Maya

    Watkins, Adam

    2012-01-01

    Deliver professional-level 3D content in no time with this comprehensive guide to 3D animation with Maya. With over 12 years of training experience, plus several award winning students under his belt, author Adam Watkins is the ideal mentor to get you up to speed with 3D in Maya. Using a structured and pragmatic approach Getting Started in 3D with Maya begins with basic theory of fundamental techniques, then builds on this knowledge using practical examples and projects to put your new skills to the test. Prepared so that you can learn in an organic fashion, each chapter builds on the know

  10. Can 3D Printing change your business?

    Unver, Ertu

    2013-01-01

    This presentation is given to businesses / companies with an interest in 3D Printing and Additive Manufacturing in West Yorkshire, UK Organised by the Calderdale and Kirklees Manufacturing Alliance. http://www.ckma.co.uk/ by Dr Ertu Unver Senior Lecturer / Product Design / MA 3D Digital Design / University of Huddersfield Location : 3M BIC, Date : 11th April, Time : 5.30 – 8pm Additive manufacturing or 3D printing is a process of making a three-dimensional (3D) objects from...

  11. Dimensional accuracy of 3D printed vertebra

    Ogden, Kent; Ordway, Nathaniel; Diallo, Dalanda; Tillapaugh-Fay, Gwen; Aslan, Can

    2014-03-01

    3D printer applications in the biomedical sciences and medical imaging are expanding and will have an increasing impact on the practice of medicine. Orthopedic and reconstructive surgery has been an obvious area for development of 3D printer applications as the segmentation of bony anatomy to generate printable models is relatively straightforward. There are important issues that should be addressed when using 3D printed models for applications that may affect patient care; in particular the dimensional accuracy of the printed parts needs to be high to avoid poor decisions being made prior to surgery or therapeutic procedures. In this work, the dimensional accuracy of 3D printed vertebral bodies derived from CT data for a cadaver spine is compared with direct measurements on the ex-vivo vertebra and with measurements made on the 3D rendered vertebra using commercial 3D image processing software. The vertebra was printed on a consumer grade 3D printer using an additive print process using PLA (polylactic acid) filament. Measurements were made for 15 different anatomic features of the vertebral body, including vertebral body height, endplate width and depth, pedicle height and width, and spinal canal width and depth, among others. It is shown that for the segmentation and printing process used, the results of measurements made on the 3D printed vertebral body are substantially the same as those produced by direct measurement on the vertebra and measurements made on the 3D rendered vertebra.

  12. 3D modelling for multipurpose cadastre

    Abduhl Rahman, A.; P. J. M. Van Oosterom; T. C. Hua; Sharkawi, K.H.; E. E. Duncan; Azri, N.; Hassan, M. I.

    2012-01-01

    Three-dimensional (3D) modelling of cadastral objects (such as legal spaces around buildings, around utility networks and other spaces) is one of the important aspects for a multipurpose cadastre (MPC). This paper describes the 3D modelling of the objects for MPC and its usage to the knowledge of 3D cadastre since more and more related agencies attempt to develop or embed 3D components into the MPC. We also intend to describe the initiative by Malaysian national mapping and cadastral agency (...

  13. Spectral fusing Gabor domain optical coherence microscopy.

    Meemon, Panomsak; Widjaja, Joewono; Rolland, Jannick P

    2016-02-01

    Gabor domain optical coherence microscopy (GD-OCM) is one of many variations of optical coherence tomography (OCT) techniques that aims for invariant high resolution across a 3D field of view by utilizing the ability to dynamically refocus the imaging optics in the sample arm. GD-OCM acquires multiple cross-sectional images at different focus positions of the objective lens, and then fuses them to obtain an invariant high-resolution 3D image of the sample, which comes with the intrinsic drawback of a longer processing time as compared to conventional Fourier domain OCT. Here, we report on an alternative Gabor fusing algorithm, the spectral-fusion technique, which directly processes each acquired spectrum and combines them prior to the Fourier transformation to obtain a depth profile. The implementation of the spectral-fusion algorithm is presented and its performance is compared to that of the prior GD-OCM spatial-fusion approach. The spectral-fusion approach shows twice the speed of the spatial-fusion approach for a spectrum size of less than 2000 point sampling, which is a commonly used spectrum size in OCT imaging, including GD-OCM. PMID:26907410

  14. Fourier Analysis of Blazar Variability

    Finke, Justin D

    2014-01-01

    Blazars display strong variability on multiple timescales and in multiple radiation bands. Their variability is often characterized by power spectral densities (PSDs) and time lags plotted as functions of the Fourier frequency. We develop a new theoretical model based on the analysis of the electron transport (continuity) equation, carried out in the Fourier domain. The continuity equation includes electron cooling and escape, and a derivation of the emission properties includes light travel time effects associated with a radiating blob in a relativistic jet. The model successfully reproduces the general shapes of the observed PSDs and predicts specific PSD and time lag behaviors associated with variability in the synchrotron, synchrotron self-Compton (SSC), and external Compton (EC) emission components, from sub-mm to gamma-rays. We discuss applications to BL Lacertae objects and to flat-spectrum radio quasars (FSRQs), where there are hints that some of the predicted features have already been observed. We a...

  15. FastScript3D - A Companion to Java 3D

    Koenig, Patti

    2005-01-01

    FastScript3D is a computer program, written in the Java 3D(TM) programming language, that establishes an alternative language that helps users who lack expertise in Java 3D to use Java 3D for constructing three-dimensional (3D)-appearing graphics. The FastScript3D language provides a set of simple, intuitive, one-line text-string commands for creating, controlling, and animating 3D models. The first word in a string is the name of a command; the rest of the string contains the data arguments for the command. The commands can also be used as an aid to learning Java 3D. Developers can extend the language by adding custom text-string commands. The commands can define new 3D objects or load representations of 3D objects from files in formats compatible with such other software systems as X3D. The text strings can be easily integrated into other languages. FastScript3D facilitates communication between scripting languages [which enable programming of hyper-text markup language (HTML) documents to interact with users] and Java 3D. The FastScript3D language can be extended and customized on both the scripting side and the Java 3D side.

  16. An Overview of 3d Topology for Ladm-Based Objects

    Zulkifli, N. A.; Rahman, A. A.; van Oosterom, P.

    2015-10-01

    This paper reviews 3D topology within Land Administration Domain Model (LADM) international standard. It is important to review characteristic of the different 3D topological models and to choose the most suitable model for certain applications. The characteristic of the different 3D topological models are based on several main aspects (e.g. space or plane partition, used primitives, constructive rules, orientation and explicit or implicit relationships). The most suitable 3D topological model depends on the type of application it is used for. There is no single 3D topology model best suitable for all types of applications. Therefore, it is very important to define the requirements of the 3D topology model. The context of this paper is a 3D topology for LADM-based objects.

  17. Viewpoint Invariant Gesture Recognition and 3D Hand Pose Estimation Using RGB-D

    Doliotis, Paul

    2013-01-01

    The broad application domain of the work presented in this thesis is pattern classification with a focus on gesture recognition and 3D hand pose estimation. One of the main contributions of the proposed thesis is a novel method for 3D hand pose estimation using RGB-D. Hand pose estimation is formulated as a database retrieval problem. The proposed…

  18. 3D modelling of near-surface, environmental effects on AEM data

    Beamish, David

    2004-01-01

    This study considers the three-dimensional (3D) modelling of compact, at-surface conductive bodies on frequency domain airborne electromagnetic (AEM) survey data. The context is the use of AEM data for environmental and land quality applications. The 3D structures encountered are typically conductive, of limited thickness (

  19. 3D PDF - a means of public access to geological 3D - objects, using the example of GTA3D

    Slaby, Mark-Fabian; Reimann, Rüdiger

    2013-04-01

    In geology, 3D modeling has become very important. In the past, two-dimensional data such as isolines, drilling profiles, or cross-sections based on those, were used to illustrate the subsurface geology, whereas now, we can create complex digital 3D models. These models are produced with special software, such as GOCAD ®. The models can be viewed, only through the software used to create them, or through viewers available for free. The platform-independent PDF (Portable Document Format), enforced by Adobe, has found a wide distribution. This format has constantly evolved over time. Meanwhile, it is possible to display CAD data in an Adobe 3D PDF file with the free Adobe Reader (version 7). In a 3D PDF, a 3D model is freely rotatable and can be assembled from a plurality of objects, which can thus be viewed from all directions on their own. In addition, it is possible to create moveable cross-sections (profiles), and to assign transparency to the objects. Based on industry-standard CAD software, 3D PDFs can be generated from a large number of formats, or even be exported directly from this software. In geoinformatics, different approaches to creating 3D PDFs exist. The intent of the Authority for Mining, Energy and Geology to allow free access to the models of the Geotectonic Atlas (GTA3D), could not be realized with standard software solutions. A specially designed code converts the 3D objects to VRML (Virtual Reality Modeling Language). VRML is one of the few formats that allow using image files (maps) as textures, and to represent colors and shapes correctly. The files were merged in Acrobat X Pro, and a 3D PDF was generated subsequently. A topographic map, a display of geographic directions and horizontal and vertical scales help to facilitate the use.

  20. Similarities between 2D and 3D convection for large Prandtl number

    PANDEY AMBRISH; VERMA MAHENDRA K; CHATTERJEE ANANDO G; DUTTA BIPLAB

    2016-07-01

    Using direct numerical simulations of Rayleigh–Bénard convection (RBC), we perform a comparative study of the spectra and fluxes of energy and entropy, and the scaling of large-scale quantities for large and infinite Prandtl numbers in two (2D) and three (3D) dimensions. We observe close similarities between the 2D and 3D RBC, in particular, the kinetic energy spectrum $E^{u}(k) ∼ k^{−13/3}$, and the entropy spectrum exhibits a dual branch with a dominant $k^{−2}$ spectrum. We showed that the dominant Fourier modes in 2D and 3D flows are very close. Consequently, the 3D RBC is quasi-two-dimensional, which is the reason for the similarities between the 2D and 3D RBC for large and infinite Prandtl numbers.

  1. An aerial 3D printing test mission

    Hirsch, Michael; McGuire, Thomas; Parsons, Michael; Leake, Skye; Straub, Jeremy

    2016-05-01

    This paper provides an overview of an aerial 3D printing technology, its development and its testing. This technology is potentially useful in its own right. In addition, this work advances the development of a related in-space 3D printing technology. A series of aerial 3D printing test missions, used to test the aerial printing technology, are discussed. Through completing these test missions, the design for an in-space 3D printer may be advanced. The current design for the in-space 3D printer involves focusing thermal energy to heat an extrusion head and allow for the extrusion of molten print material. Plastics can be used as well as composites including metal, allowing for the extrusion of conductive material. A variety of experiments will be used to test this initial 3D printer design. High altitude balloons will be used to test the effects of microgravity on 3D printing, as well as parabolic flight tests. Zero pressure balloons can be used to test the effect of long 3D printing missions subjected to low temperatures. Vacuum chambers will be used to test 3D printing in a vacuum environment. The results will be used to adapt a current prototype of an in-space 3D printer. Then, a small scale prototype can be sent into low-Earth orbit as a 3-U cube satellite. With the ability to 3D print in space demonstrated, future missions can launch production hardware through which the sustainability and durability of structures in space will be greatly improved.

  2. 3D ultrafast ultrasound imaging in vivo

    Very high frame rate ultrasound imaging has recently allowed for the extension of the applications of echography to new fields of study such as the functional imaging of the brain, cardiac electrophysiology, and the quantitative imaging of the intrinsic mechanical properties of tumors, to name a few, non-invasively and in real time. In this study, we present the first implementation of Ultrafast Ultrasound Imaging in 3D based on the use of either diverging or plane waves emanating from a sparse virtual array located behind the probe. It achieves high contrast and resolution while maintaining imaging rates of thousands of volumes per second. A customized portable ultrasound system was developed to sample 1024 independent channels and to drive a 32  ×  32 matrix-array probe. Its ability to track in 3D transient phenomena occurring in the millisecond range within a single ultrafast acquisition was demonstrated for 3D Shear-Wave Imaging, 3D Ultrafast Doppler Imaging, and, finally, 3D Ultrafast combined Tissue and Flow Doppler Imaging. The propagation of shear waves was tracked in a phantom and used to characterize its stiffness. 3D Ultrafast Doppler was used to obtain 3D maps of Pulsed Doppler, Color Doppler, and Power Doppler quantities in a single acquisition and revealed, at thousands of volumes per second, the complex 3D flow patterns occurring in the ventricles of the human heart during an entire cardiac cycle, as well as the 3D in vivo interaction of blood flow and wall motion during the pulse wave in the carotid at the bifurcation. This study demonstrates the potential of 3D Ultrafast Ultrasound Imaging for the 3D mapping of stiffness, tissue motion, and flow in humans in vivo and promises new clinical applications of ultrasound with reduced intra—and inter-observer variability. (fast track communication)

  3. Weighted Fourier and Fourier-Stieltjes Algebras

    Amin Mahmoodi

    2010-10-01

    Full Text Available Let $G$ be a locally compact group and $omega$ be a symmetric weight function on $G$. We define a co-product $Gamma_omega$ on the weighted algebra $L^infty(G, omega^{-1}$ of essentially $omega$-bounded Borel measurable functions on $G$ and show that $L^infty(G, omega^{-1}$ becomes a Kac algebra with natural co-inverse $kappa_omega$ and Haar weight $phi_omega$. We use the machinery of Kac algebras to introduce the weighted Fourier and Fourier-Stieltjes algebra $ A(G,omega^{-1}$ and $ B(G,omega^{-1}$ of $G$.

  4. Weighted Fourier and Fourier-Stieltjes Algebras

    Amin Mahmoodi

    2010-01-01

    Let $G$ be a locally compact group and $omega$ be a symmetric weight function on $G$. We define a co-product $Gamma_omega$ on the weighted algebra $L^infty(G, omega^{-1})$ of essentially $omega$-bounded Borel measurable functions on $G$ and show that $L^infty(G, omega^{-1})$ becomes a Kac algebra with natural co-inverse $kappa_omega$ and Haar weight $phi_omega$. We use the machinery of Kac algebras to introduce the weighted Fourier and Fourier-Stieltjes algebra $ A(G,omega^{-1})$ and $ B(G,o...

  5. 3-D structures of planetary nebulae

    Steffen, Wolfgang

    2016-01-01

    Recent advances in the 3-D reconstruction of planetary nebulae are reviewed. We include not only results for 3-D reconstructions, but also the current techniques in terms of general methods and software. In order to obtain more accurate reconstructions, we suggest to extend the widely used assumption of homologous nebula expansion to map spectroscopically measured velocity to position along the line of sight.

  6. 3D printing of functional structures

    Krijnen, G.J.M.

    2016-01-01

    The technology colloquial known as ‘3D printing’ has developed in such diversity in printing technologies and application fields that meanwhile it seems anything is possible. However, clearly the ideal 3D Printer, with high resolution, multi-material capability, fast printing, etc. is yet to be deve

  7. 3D Printed Block Copolymer Nanostructures

    Scalfani, Vincent F.; Turner, C. Heath; Rupar, Paul A.; Jenkins, Alexander H.; Bara, Jason E.

    2015-01-01

    The emergence of 3D printing has dramatically advanced the availability of tangible molecular and extended solid models. Interestingly, there are few nanostructure models available both commercially and through other do-it-yourself approaches such as 3D printing. This is unfortunate given the importance of nanotechnology in science today. In this…

  8. Perception of detail in 3D images

    Heyndrickx, I.; Kaptein, R.

    2009-01-01

    A lot of current 3D displays suffer from the fact that their spatial resolution is lower compared to their 2D counterparts. One reason for this is that the multiple views needed to generate 3D are often spatially multiplexed. Besides this, imperfect separation of the left- and right-eye view leads t

  9. 3D Reconstruction of NMR Images

    Peter Izak; Milan Smetana; Libor Hargas; Miroslav Hrianka; Pavol Spanik

    2007-01-01

    This paper introduces experiment of 3D reconstruction NMR images scanned from magnetic resonance device. There are described methods which can be used for 3D reconstruction magnetic resonance images in biomedical application. The main idea is based on marching cubes algorithm. For this task was chosen sophistication method by program Vision Assistant, which is a part of program LabVIEW.

  10. Stereo 3-D Vision in Teaching Physics

    Zabunov, Svetoslav

    2012-01-01

    Stereo 3-D vision is a technology used to present images on a flat surface (screen, paper, etc.) and at the same time to create the notion of three-dimensional spatial perception of the viewed scene. A great number of physical processes are much better understood when viewed in stereo 3-D vision compared to standard flat 2-D presentation. The…

  11. 3D, or Not to Be?

    Norbury, Keith

    2012-01-01

    It may be too soon for students to be showing up for class with popcorn and gummy bears, but technology similar to that behind the 3D blockbuster movie "Avatar" is slowly finding its way into college classrooms. 3D classroom projectors are taking students on fantastic voyages inside the human body, to the ruins of ancient Greece--even to faraway…

  12. The 3D-city model

    Holmgren, Steen; Rüdiger, Bjarne; Tournay, Bruno

    2001-01-01

    We have worked with the construction and use of 3D city models for about ten years. This work has given us valuable experience concerning model methodology. In addition to this collection of knowledge, our perception of the concept of city models has changed radically. In order to explain...... of 3D city models....

  13. Immersive 3D Geovisualization in Higher Education

    Philips, Andrea; Walz, Ariane; Bergner, Andreas; Graeff, Thomas; Heistermann, Maik; Kienzler, Sarah; Korup, Oliver; Lipp, Torsten; Schwanghart, Wolfgang; Zeilinger, Gerold

    2015-01-01

    In this study, we investigate how immersive 3D geovisualization can be used in higher education. Based on MacEachren and Kraak's geovisualization cube, we examine the usage of immersive 3D geovisualization and its usefulness in a research-based learning module on flood risk, called GEOSimulator. Results of a survey among participating students…

  14. Parametrizable cameras for 3D computational steering

    Mulder, J.D.; Wijk, J.J. van

    1997-01-01

    We present a method for the definition of multiple views in 3D interfaces for computational steering. The method uses the concept of a point-based parametrizable camera object. This concept enables a user to create and configure multiple views on his custom 3D interface in an intuitive graphical man

  15. Wow! 3D Content Awakens the Classroom

    Gordon, Dan

    2010-01-01

    From her first encounter with stereoscopic 3D technology designed for classroom instruction, Megan Timme, principal at Hamilton Park Pacesetter Magnet School in Dallas, sensed it could be transformative. Last spring, when she began pilot-testing 3D content in her third-, fourth- and fifth-grade classrooms, Timme wasn't disappointed. Students…

  16. 3D background aerodynamics using CFD

    Sørensen, Niels N.

    2002-01-01

    3D rotor computations for the Greek Geovilogiki (GEO) 44 meter rotor equipped with 19 meters blades are performed. The lift and drag polars are extracted at five spanvise locations r/R= (.37, .55, .71, .82, .93) based on identification of stagnationpoints between 2D and 3D computations. The inner...

  17. 3D directional coupler for impulse UWB

    Le Kernec, Julien; KLEPAL, Martin; Sokol, Vratislav

    2011-01-01

    The AWS Group developed a UWB radar and UWB transceiver for indoor people location and tracking. A radar concept has been developed. This paper will describe step by step the realization of a UWB directional coupler with a novel 3-D architecture. This paper gives a walkthrough of our design of the 3-D directional coupler.

  18. Terajets produced by 3D dielectric cuboids

    Pacheco-Peña, V; Minin, I V; Minin, O V

    2014-01-01

    The capability of generating terajets using 3D dielectric cuboids working at terahertz (THz) frequencies (as analogues of nanojets in the infrared band) are introduced and studied numerically. The focusing performance of the terajets are evaluated in terms of the transversal full width at half maximum along x- and y- directions using different refractive indexes for a 3D dielectric cuboid with a fixed geometry, obtaining a quasi-symmetric terajet with a subwavelength resolution of ~0.46{\\lambda}0 when the refractive index is n = 1.41. Moreover, the backscattering enhancement produced when metal particles are introduced in the terajet region is demonstrated for a 3D dielectric cuboid and compared with its 2D counterpart. The results of the jet generated for the 3D case are experimentally validated at sub-THz waves, demonstrating the ability to produce terajets using 3D cuboids.

  19. Fabrication of 3D Silicon Sensors

    Kok, A.; Hansen, T.E.; Hansen, T.A.; Lietaer, N.; Summanwar, A.; /SINTEF, Oslo; Kenney, C.; Hasi, J.; /SLAC; Da Via, C.; /Manchester U.; Parker, S.I.; /Hawaii U.

    2012-06-06

    Silicon sensors with a three-dimensional (3-D) architecture, in which the n and p electrodes penetrate through the entire substrate, have many advantages over planar silicon sensors including radiation hardness, fast time response, active edge and dual readout capabilities. The fabrication of 3D sensors is however rather complex. In recent years, there have been worldwide activities on 3D fabrication. SINTEF in collaboration with Stanford Nanofabrication Facility have successfully fabricated the original (single sided double column type) 3D detectors in two prototype runs and the third run is now on-going. This paper reports the status of this fabrication work and the resulted yield. The work of other groups such as the development of double sided 3D detectors is also briefly reported.

  20. 3D-grafiikka ja pelimoottorit

    Sillanpää, Otto

    2014-01-01

    Tässä opinnäytetyössä tutkitaan miten 3D-mallit saadaan sellaiseen muotoon, että ne olisivat käytettävissä eri pelimoottoreissa. Tutkimuksen tarkoituksena on selvittää, miten luodaan 3D-malleja pelimoottoreihin, sekä miten 3D-mallinnusohjelmat ja pelimoottorit eroavat toisistaan, kun käsitellään 3D-malleja. Tässä työssä pelimoottoreina toimivat Valven Source sekä Epic Gamesin Unreal Engine 3. 3D-mallinnusohjelmista käytössä olivat Autodeskin 3ds Max 2014 ja Blender Foundationin Blender 2.7...

  1. Maintaining and troubleshooting your 3D printer

    Bell, Charles

    2014-01-01

    Maintaining and Troubleshooting Your 3D Printer by Charles Bell is your guide to keeping your 3D printer running through preventive maintenance, repair, and diagnosing and solving problems in 3D printing. If you've bought or built a 3D printer such as a MakerBot only to be confounded by jagged edges, corner lift, top layers that aren't solid, or any of a myriad of other problems that plague 3D printer enthusiasts, then here is the book to help you get past all that and recapture the joy of creative fabrication. The book also includes valuable tips for builders and those who want to modify the

  2. 6D Interpretation of 3D Gravity

    Herfray, Yannick; Scarinci, Carlos

    2016-01-01

    We show that 3D gravity, in its pure connection formulation, admits a natural 6D interpretation. The 3D field equations for the connection are equivalent to 6D Hitchin equations for the Chern-Simons 3-form in the total space of the principal bundle over the 3-dimensional base. Turning this construction around one gets an explanation of why the pure connection formulation of 3D gravity exists. More generally, we interpret 3D gravity as the dimensional reduction of the 6D Hitchin theory. To this end, we show that any SU(2) invariant closed 3-form in the total space of the principal SU(2) bundle can be parametrised by a connection together with a 2-form field on the base. The dimensional reduction of the 6D Hitchin theory then gives rise to 3D gravity coupled to a topological 2-form field.

  3. The psychology of the 3D experience

    Janicke, Sophie H.; Ellis, Andrew

    2013-03-01

    With 3D televisions expected to reach 50% home saturation as early as 2016, understanding the psychological mechanisms underlying the user response to 3D technology is critical for content providers, educators and academics. Unfortunately, research examining the effects of 3D technology has not kept pace with the technology's rapid adoption, resulting in large-scale use of a technology about which very little is actually known. Recognizing this need for new research, we conducted a series of studies measuring and comparing many of the variables and processes underlying both 2D and 3D media experiences. In our first study, we found narratives within primetime dramas had the power to shift viewer attitudes in both 2D and 3D settings. However, we found no difference in persuasive power between 2D and 3D content. We contend this lack of effect was the result of poor conversion quality and the unique demands of 3D production. In our second study, we found 3D technology significantly increased enjoyment when viewing sports content, yet offered no added enjoyment when viewing a movie trailer. The enhanced enjoyment of the sports content was shown to be the result of heightened emotional arousal and attention in the 3D condition. We believe the lack of effect found for the movie trailer may be genre-related. In our final study, we found 3D technology significantly enhanced enjoyment of two video games from different genres. The added enjoyment was found to be the result of an increased sense of presence.

  4. 3D Visualization Development of SIUE Campus

    Nellutla, Shravya

    Geographic Information Systems (GIS) has progressed from the traditional map-making to the modern technology where the information can be created, edited, managed and analyzed. Like any other models, maps are simplified representations of real world. Hence visualization plays an essential role in the applications of GIS. The use of sophisticated visualization tools and methods, especially three dimensional (3D) modeling, has been rising considerably due to the advancement of technology. There are currently many off-the-shelf technologies available in the market to build 3D GIS models. One of the objectives of this research was to examine the available ArcGIS and its extensions for 3D modeling and visualization and use them to depict a real world scenario. Furthermore, with the advent of the web, a platform for accessing and sharing spatial information on the Internet, it is possible to generate interactive online maps. Integrating Internet capacity with GIS functionality redefines the process of sharing and processing the spatial information. Enabling a 3D map online requires off-the-shelf GIS software, 3D model builders, web server, web applications and client server technologies. Such environments are either complicated or expensive because of the amount of hardware and software involved. Therefore, the second objective of this research was to investigate and develop simpler yet cost-effective 3D modeling approach that uses available ArcGIS suite products and the free 3D computer graphics software for designing 3D world scenes. Both ArcGIS Explorer and ArcGIS Online will be used to demonstrate the way of sharing and distributing 3D geographic information on the Internet. A case study of the development of 3D campus for the Southern Illinois University Edwardsville is demonstrated.

  5. Adaptive Fourier Decomposition Based Time-Frequency Analysis

    Li-Ming Zhang

    2014-01-01

    The attempt to represent a signal simultaneously in time and frequency domains is full of challenges. The recently proposed adaptive Fourier decomposition (AFD) offers a practical approach to solve this problem. This paper presents the principles of the AFD based time-frequency analysis in three aspects: instantaneous frequency analysis, frequency spectrum analysis, and the spectrogram analysis. An experiment is conducted and compared with the Fourier transform in convergence rate and short-time Fourier transform in time-frequency distribution. The proposed approach performs better than both the Fourier transform and short-time Fourier transform.

  6. Semi- and virtual 3D dosimetry in clinical practice

    Korreman, S. S.

    2013-01-01

    In this review, 3D dosimetry is divided in three categories; "true" 3D, semi-3D and virtual 3D. Virtual 3D involves the use of measurement arrays either before or after beam entry in the patient/phantom, whereas semi-3D involves use of measurement arrays in phantoms mimicking the patient. True 3D...

  7. 3D Fiber Orientation Simulation for Plastic Injection Molding

    Lin, Baojiu; Jin, Xiaoshi; Zheng, Rong; Costa, Franco S.; Fan, Zhiliang

    2004-06-01

    Glass fiber reinforced polymer is widely used in the products made using injection molding processing. The distribution of fiber orientation inside plastic parts has direct effects on quality of molded parts. Using computer simulation to predict fiber orientation distribution is one of most efficient ways to assist engineers to do warpage analysis and to find a good design solution to produce high quality plastic parts. Fiber orientation simulation software based on 2-1/2D (midplane /Dual domain mesh) techniques has been used in industry for a decade. However, the 2-1/2D technique is based on the planar Hele-Shaw approximation and it is not suitable when the geometry has complex three-dimensional features which cannot be well approximated by 2D shells. Recently, a full 3D simulation software for fiber orientation has been developed and integrated into Moldflow Plastics Insight 3D simulation software. The theory for this new 3D fiber orientation calculation module is described in this paper. Several examples are also presented to show the benefit in using 3D fiber orientation simulation.

  8. 3D object-oriented image analysis in 3D geophysical modelling

    Fadel, I.; van der Meijde, M.; Kerle, N.;

    2015-01-01

    Non-uniqueness of satellite gravity interpretation has traditionally been reduced by using a priori information from seismic tomography models. This reduction in the non-uniqueness has been based on velocity-density conversion formulas or user interpretation of the 3D subsurface structures (objects......) based on the seismic tomography models and then forward modelling these objects. However, this form of object-based approach has been done without a standardized methodology on how to extract the subsurface structures from the 3D models. In this research, a 3D object-oriented image analysis (3D OOA......) approach was implemented to extract the 3D subsurface structures from geophysical data. The approach was applied on a 3D shear wave seismic tomography model of the central part of the East African Rift System. Subsequently, the extracted 3D objects from the tomography model were reconstructed in the 3D...

  9. 3D Reconstruction Technique for Tomographic PIV

    姜楠; 包全; 杨绍琼

    2015-01-01

    Tomographic particle image velocimetry(Tomo-PIV) is a state-of-the-art experimental technique based on a method of optical tomography to achieve the three-dimensional(3D) reconstruction for three-dimensional three-component(3D-3C) flow velocity measurements. 3D reconstruction for Tomo-PIV is carried out herein. Meanwhile, a 3D simplified tomographic reconstruction model reduced from a 3D volume light inten-sity field with 2D projection images into a 2D Tomo-slice plane with 1D projecting lines, i.e., simplifying this 3D reconstruction into a problem of 2D Tomo-slice plane reconstruction, is applied thereafter. Two kinds of the most well-known algebraic reconstruction techniques, algebraic reconstruction technique(ART) and multiple algebraic reconstruction technique(MART), are compared as well. The principles of the two reconstruction algorithms are discussed in detail, which has been performed by a series of simulation images, yielding the corresponding recon-struction images that show different features between the ART and MART algorithm, and then their advantages and disadvantages are discussed. Further discussions are made for the standard particle image reconstruction when the background noise of the pre-initial particle image has been removed. Results show that the particle image recon-struction has been greatly improved. The MART algorithm is much better than the ART. Furthermore, the computa-tional analyses of two parameters(the particle density and the number of cameras), are performed to study their effects on the reconstruction. Lastly, the 3D volume particle field is reconstructed by using the improved algorithm based on the simplified 3D tomographic reconstruction model, which proves that the algorithm simplification is feasible and it can be applied to the reconstruction of 3D volume particle field in a Tomo-PIV system.

  10. Extra Dimensions: 3D in PDF Documentation

    Experimental science is replete with multi-dimensional information which is often poorly represented by the two dimensions of presentation slides and print media. Past efforts to disseminate such information to a wider audience have failed for a number of reasons, including a lack of standards which are easy to implement and have broad support. Adobe's Portable Document Format (PDF) has in recent years become the de facto standard for secure, dependable electronic information exchange. It has done so by creating an open format, providing support for multiple platforms and being reliable and extensible. By providing support for the ECMA standard Universal 3D (U3D) and the ISO PRC file format in its free Adobe Reader software, Adobe has made it easy to distribute and interact with 3D content. Until recently, Adobe's Acrobat software was also capable of incorporating 3D content into PDF files from a variety of 3D file formats, including proprietary CAD formats. However, this functionality is no longer available in Acrobat X, having been spun off to a separate company. Incorporating 3D content now requires the additional purchase of a separate plug-in. In this talk we present alternatives based on open source libraries which allow the programmatic creation of 3D content in PDF format. While not providing the same level of access to CAD files as the commercial software, it does provide physicists with an alternative path to incorporate 3D content into PDF files from such disparate applications as detector geometries from Geant4, 3D data sets, mathematical surfaces or tesselated volumes.

  11. Fourier analysis of blazar variability

    Finke, Justin D. [U.S. Naval Research Laboratory, Code 7653, 4555 Overlook Avenue SW, Washington, DC 20375-5352 (United States); Becker, Peter A., E-mail: justin.finke@nrl.navy.mil [School of Physics, Astronomy, and Computational Sciences, MS 5C3, George Mason University, 4400 University Drive, Fairfax, VA 22030 (United States)

    2014-08-10

    Blazars display strong variability on multiple timescales and in multiple radiation bands. Their variability is often characterized by power spectral densities (PSDs) and time lags plotted as functions of the Fourier frequency. We develop a new theoretical model based on the analysis of the electron transport (continuity) equation, carried out in the Fourier domain. The continuity equation includes electron cooling and escape, and a derivation of the emission properties includes light travel time effects associated with a radiating blob in a relativistic jet. The model successfully reproduces the general shapes of the observed PSDs and predicts specific PSD and time lag behaviors associated with variability in the synchrotron, synchrotron self-Compton, and external Compton emission components, from submillimeter to γ-rays. We discuss applications to BL Lacertae objects and to flat-spectrum radio quasars (FSRQs), where there are hints that some of the predicted features have already been observed. We also find that FSRQs should have steeper γ-ray PSD power-law indices than BL Lac objects at Fourier frequencies ≲ 10{sup –4} Hz, in qualitative agreement with previously reported observations by the Fermi Large Area Telescope.

  12. An Improved Version of TOPAZ 3D

    Krasnykh, Anatoly K

    2003-01-01

    An improved version of the TOPAZ 3D gun code is presented as a powerful tool for beam optics simulation. In contrast to the previous version of TOPAZ 3D, the geometry of the device under test is introduced into TOPAZ 3D directly from a CAD program, such as Solid Edge or AutoCAD. In order to have this new feature, an interface was developed, using the GiD software package as a meshing code. The article describes this method with two models to illustrate the results.

  13. Matching Feature Points in 3D World

    Avdiu, Blerta

    2012-01-01

    This thesis work deals with the most actual topic in Computer Vision field which is scene understanding and this using matching of 3D feature point images. The objective is to make use of Saab’s latest breakthrough in extraction of 3D feature points, to identify the best alignment of at least two 3D feature point images. The thesis gives a theoretical overview of the latest algorithms used for feature detection, description and matching. The work continues with a brief description of the simu...

  14. 3-D Human Modeling and Animation

    Ratner, Peter

    2012-01-01

    3-D Human Modeling and Animation Third Edition All the tools and techniques you need to bring human figures to 3-D life Thanks to today's remarkable technology, artists can create and animate realistic, three-dimensional human figures that were not possible just a few years ago. This easy-to-follow book guides you through all the necessary steps to adapt your own artistic skill in figure drawing, painting, and sculpture to this exciting digital canvas. 3-D Human Modeling and Animation, Third Edition starts you off with simple modeling, then prepares you for more advanced techniques for crea

  15. General Concept of 3D SLAM

    Zhang, Peter; Millos, Evangelous; Gu, Jason

    2009-01-01

    This chapter established an approach to solve the full 3D SLAM problem, applied to an underwater environment. First, a general approach to the 3D SLAM problem was presented, which included the models in 3D case, data association and estimation algorithm. For an underwater mobile robot, a new measurement system was designed for large area's globally-consistent SLAM: buoys for long-range estimation, and camera for short-range estimation and map building. Globally-consistent results could be obt...

  16. FUN3D Manual: 12.5

    Biedron, Robert T.; Derlaga, Joseph M.; Gnoffo, Peter A.; Hammond, Dana P.; Jones, William T.; Kleb, William L.; Lee-Rausch, Elizabeth M.; Nielsen, Eric J.; Park, Michael A.; Rumsey, Christopher L.; Thomas, James L.; Wood, William A.

    2014-01-01

    This manual describes the installation and execution of FUN3D version 12.5, including optional dependent packages. FUN3D is a suite of computational uid dynamics simulation and design tools that uses mixed-element unstructured grids in a large number of formats, including structured multiblock and overset grid systems. A discretely-exact adjoint solver enables ecient gradient-based design and grid adaptation to reduce estimated discretization error. FUN3D is available with and without a reacting, real-gas capability. This generic gas option is available only for those persons that qualify for its beta release status.

  17. FUN3D Manual: 13.0

    Biedron, Robert T.; Carlson, Jan-Renee; Derlaga, Joseph M.; Gnoffo, Peter A.; Hammond, Dana P.; Jones, William T.; Kleb, Bill; Lee-Rausch, Elizabeth M.; Nielsen, Eric J.; Park, Michael A.; Rumsey, Christopher L.; Thomas, James L.; Wood, William A.

    2016-01-01

    This manual describes the installation and execution of FUN3D version 13.0, including optional dependent packages. FUN3D is a suite of computational fluid dynamics simulation and design tools that uses mixed-element unstructured grids in a large number of formats, including structured multiblock and overset grid systems. A discretely-exact adjoint solver enables efficient gradient-based design and grid adaptation to reduce estimated discretization error. FUN3D is available with and without a reacting, real-gas capability. This generic gas option is available only for those persons that qualify for its beta release status.

  18. FUN3D Manual: 12.9

    Biedron, Robert T.; Carlson, Jan-Renee; Derlaga, Joseph M.; Gnoffo, Peter A.; Hammond, Dana P.; Jones, William T.; Kleb, Bil; Lee-Rausch, Elizabeth M.; Nielsen, Eric J.; Park, Michael A.; Rumsey, Christopher L.; Thomas, James L.; Wood, William A.

    2016-01-01

    This manual describes the installation and execution of FUN3D version 12.9, including optional dependent packages. FUN3D is a suite of computational fluid dynamics simulation and design tools that uses mixed-element unstructured grids in a large number of formats, including structured multiblock and overset grid systems. A discretely-exact adjoint solver enables efficient gradient-based design and grid adaptation to reduce estimated discretization error. FUN3D is available with and without a reacting, real-gas capability. This generic gas option is available only for those persons that qualify for its beta release status.

  19. FUN3D Manual: 12.4

    Biedron, Robert T.; Derlaga, Joseph M.; Gnoffo, Peter A.; Hammond, Dana P.; Jones, William T.; Kleb, Bil; Lee-Rausch, Elizabeth M.; Nielsen, Eric J.; Park, Michael A.; Rumsey, Christopher L.; Thomas, James L.; Wood, William A.

    2014-01-01

    This manual describes the installation and execution of FUN3D version 12.4, including optional dependent packages. FUN3D is a suite of computational fluid dynamics simulation and design tools that uses mixedelement unstructured grids in a large number of formats, including structured multiblock and overset grid systems. A discretely-exact adjoint solver enables efficient gradient-based design and grid adaptation to reduce estimated discretization error. FUN3D is available with and without a reacting, real-gas capability. This generic gas option is available only for those persons that qualify for its beta release status.

  20. 3D Media and the Semantic Web

    Spagnuolo, Michela; Falcidieno, Bianca

    2009-01-01

    3D content is widely recognized as the next wave of digital media. The success of 3D communities and mapping applications (for example, Second Life and GoogleEarth) and the decreasing costs of producing 3D environments are leading analysts to predict a dramatic shift in how people see and navigate the Internet. Greg Sterling, founder of the research fi rm Sterling Market Intelligence, suggests that"the Internet could very well be on its way to shifting from a text-based environment to a visua...

  1. 3D grafika a hry

    Vataščinová, Lenka

    2016-01-01

    In my bachelor thesis, I am going to introduce the topic of 3D graphics in the game environment. Firstly, I will provide a brief introduction of history of 3D graphics in general, but with the emphasis on history of game industry in particular. Next, I will present 3D graphics of RPG games in particular, and I will analyse the graphical side of digital work production. The main contribution of this thesis is provided in the practical part, which deals with creation of an environment for an an...

  2. An Improved Version of TOPAZ 3D

    An improved version of the TOPAZ 3D gun code is presented as a powerful tool for beam optics simulation. In contrast to the previous version of TOPAZ 3D, the geometry of the device under test is introduced into TOPAZ 3D directly from a CAD program, such as Solid Edge or AutoCAD. In order to have this new feature, an interface was developed, using the GiD software package as a meshing code. The article describes this method with two models to illustrate the results

  3. Robot Arms with 3D Vision Capabilities

    Borangiu, Theodor; Alexandru DUMITRACHE

    2010-01-01

    This chapter presented two applications of 3D vision in industrial robotics. The first one allows 3D reconstruction of decorative objects using a laser-based profile scanner mounted on a 6-DOF industrial robot arm, while the scanned part is placed on a rotary table. The second application uses the same profile scanner for 3D robot guidance along a complex path, which is learned automatically using the laser sensor and then followed using a physical tool. While the laser sensor is an expensive...

  4. Automatic balancing of 3D models

    Christiansen, Asger Nyman; Schmidt, Ryan; Bærentzen, Jakob Andreas

    2014-01-01

    3D printing technologies allow for more diverse shapes than are possible with molds and the cost of making just one single object is negligible compared to traditional production methods. However, not all shapes are suitable for 3D print. One of the remaining costs is therefore human time spent......, in these cases, we will apply a rotation of the object which only deforms the shape a little near the base. No user input is required but it is possible to specify manufacturing constraints related to specific 3D print technologies. Several models have successfully been balanced and printed using both polyjet...

  5. 3D Printing the ATLAS' barrel toroid

    Goncalves, Tiago Barreiro

    2016-01-01

    The present report summarizes my work as part of the Summer Student Programme 2016 in the CERN IR-ECO-TSP department (International Relations – Education, Communication & Outreach – Teacher and Student Programmes). Particularly, I worked closely with the S’Cool LAB team on a science education project. This project included the 3D designing, 3D printing, and assembling of a model of the ATLAS’ barrel toroid. A detailed description of the project' development is presented and a short manual on how to use 3D printing software and hardware is attached.

  6. Participation and 3D Visualization Tools

    Mullins, Michael; Jensen, Mikkel Holm; Henriksen, Sune;

    2004-01-01

    With a departure point in a workshop held at the VR Media Lab at Aalborg University , this paper deals with aspects of public participation and the use of 3D visualisation tools. The workshop grew from a desire to involve a broad collaboration between the many actors in the city through using new...... perceptions of architectural representation in urban design where 3D visualisation techniques are used. It is the authors? general finding that, while 3D visualisation media have the potential to increase understanding of virtual space for the lay public, as well as for professionals, the lay public require...

  7. The reactor dynamics code DYN3D

    The article provides an overview on the code DYN3D which is a three-dimensional core model for steady-state, dynamic and depletion calculations in reactor cores with quadratic or hexagonal fuel assembly geometry being developed by the Helmholtz-Zentrum Dresden-Rossendorf for more than 20 years. The current paper gives an overview on the basic DYN3D models and the available code couplings. The verification and validation status is shortly outlined. The paper concludes with the current developments of the DYN3D code. For more detailed information the reader is referred to the publications cited in the corresponding chapters.

  8. 3D-hahmojen toteutus mobiilipeliin

    Kemppainen, Matti

    2012-01-01

    Mobiilipelien suosio on kasvanut räjähdysmäisesti viime vuosina älypuhelinten kehittymisen myötä. Tässä opinnäytetyössä selvitetään kolmiulotteisen pelihahmon toteutusprosessi mobiilipeliin. Lisäksi pohditaan maksullisten ja ilmaisten ohjelmien eroja toteutuksessa. Pelihahmojen toteutus perustuu mobiilipeliprojektiin peliyrityksessä, jossa työskentelin graafikkona. Ohjelmien vertailussa on mukana 3D Studio Max, Blender 3D, Photoshop ja GIMP. Käytännön osuudessa käydään läpi 3D-pelihahmon...

  9. Pharmacophore definition and 3D searches.

    Langer, T; Wolber, G

    2004-12-01

    The most common pharmacophore building concepts based on either 3D structure of the target or ligand information are discussed together with the application of such models as queries for 3D database search. An overview of the key techniques available on the market is given and differences with respect to algorithms used and performance obtained are highlighted. Pharmacophore modelling and 3D database search are shown to be successful tools for enriching screening experiments aimed at the discovery of novel bio-active compounds.: PMID:24981486

  10. Computer Modelling of 3D Geological Surface

    Kodge B. G.

    2011-02-01

    Full Text Available The geological surveying presently uses methods and tools for the computer modeling of 3D-structures of the geographical subsurface and geotechnical characterization as well as the application of geoinformation systems for management and analysis of spatial data, and their cartographic presentation. The objectives of this paper are to present a 3D geological surface model of Latur district in Maharashtra state of India. This study is undertaken through the several processes which are discussed in this paper to generate and visualize the automated 3D geological surface model of a projected area.

  11. 3D face modeling, analysis and recognition

    Daoudi, Mohamed; Veltkamp, Remco

    2013-01-01

    3D Face Modeling, Analysis and Recognition presents methodologies for analyzing shapes of facial surfaces, develops computational tools for analyzing 3D face data, and illustrates them using state-of-the-art applications. The methodologies chosen are based on efficient representations, metrics, comparisons, and classifications of features that are especially relevant in the context of 3D measurements of human faces. These frameworks have a long-term utility in face analysis, taking into account the anticipated improvements in data collection, data storage, processing speeds, and application s

  12. Computer Modelling of 3D Geological Surface

    Kodge, B G

    2011-01-01

    The geological surveying presently uses methods and tools for the computer modeling of 3D-structures of the geographical subsurface and geotechnical characterization as well as the application of geoinformation systems for management and analysis of spatial data, and their cartographic presentation. The objectives of this paper are to present a 3D geological surface model of Latur district in Maharashtra state of India. This study is undertaken through the several processes which are discussed in this paper to generate and visualize the automated 3D geological surface model of a projected area.

  13. 3D tulostus - digitaalisesta mallista esineeksi

    Muurinen, Kimmo

    2013-01-01

    Tässä opinnäytetyössä esitellään 3D tulostuksen tekniikka ja materiaaleja, suunnitellaan ja tuotetaan esimerkkikappaleen digitaalinen malli, sekä tulostetaan muovinen esine digi-taalisen mallin pohjalta. Työn tavoitteena on perehdyttää lukija prosessiin, jossa itse tuotettu digitaalinen malli tulostetaan käyttäen harrastajakäyttöön tarkoitettua edullista 3D tulostinta. Esimerkkikappaleen eri osien mallinnusprosessi näytetään kokonaisuudessaan ja kerro-taan perusteita 3D mallinnuksesta...

  14. 3D-MR cholangio-angiography

    Ohkawa, Shinichi [Isehara Kyohdoh Hospital, Kanagawa (Japan); Hiramatsu, Kyoichi

    1995-04-01

    This report introduces a new 3D-MR cholangio-angiography technique using 3D Fast SE MR cholangiography and 3D phase contrast MR angiography for obstructive jaundice. In all eight cases, dilated biliary tracts as well as portal veins were clearly visualized in the same image. This new technique helped to determine the operability and surgical strategy for cases with obstructive jaundice. It also provided anatomical guidance for surgical procedures. This study suggests that this technique may replace the currently used modalities for obstructive jaundice. (author).

  15. A high capacity 3D steganography algorithm.

    Chao, Min-Wen; Lin, Chao-hung; Yu, Cheng-Wei; Lee, Tong-Yee

    2009-01-01

    In this paper, we present a very high-capacity and low-distortion 3D steganography scheme. Our steganography approach is based on a novel multilayered embedding scheme to hide secret messages in the vertices of 3D polygon models. Experimental results show that the cover model distortion is very small as the number of hiding layers ranges from 7 to 13 layers. To the best of our knowledge, this novel approach can provide much higher hiding capacity than other state-of-the-art approaches, while obeying the low distortion and security basic requirements for steganography on 3D models. PMID:19147891

  16. 3D Human cartilage surface characterization by optical coherence tomography

    Brill, Nicolai; Riedel, Jörn; Schmitt, Robert; Tingart, Markus; Truhn, Daniel; Pufe, Thomas; Jahr, Holger; Nebelung, Sven

    2015-10-01

    Early diagnosis and treatment of cartilage degeneration is of high clinical interest. Loss of surface integrity is considered one of the earliest and most reliable signs of degeneration, but cannot currently be evaluated objectively. Optical Coherence Tomography (OCT) is an arthroscopically available light-based non-destructive real-time imaging technology that allows imaging at micrometre resolutions to millimetre depths. As OCT-based surface evaluation standards remain to be defined, the present study investigated the diagnostic potential of 3D surface profile parameters in the comprehensive evaluation of cartilage degeneration. To this end, 45 cartilage samples of different degenerative grades were obtained from total knee replacements (2 males, 10 females; mean age 63.8 years), cut to standard size and imaged using a spectral-domain OCT device (Thorlabs, Germany). 3D OCT datasets of 8  ×  8, 4  ×  4 and 1  ×  1 mm (width  ×  length) were obtained and pre-processed (image adjustments, morphological filtering). Subsequent automated surface identification algorithms were used to obtain the 3D primary profiles, which were then filtered and processed using established algorithms employing ISO standards. The 3D surface profile thus obtained was used to calculate a set of 21 3D surface profile parameters, i.e. height (e.g. Sa), functional (e.g. Sk), hybrid (e.g. Sdq) and segmentation-related parameters (e.g. Spd). Samples underwent reference histological assessment according to the Degenerative Joint Disease classification. Statistical analyses included calculation of Spearman’s rho and assessment of inter-group differences using the Kruskal Wallis test. Overall, the majority of 3D surface profile parameters revealed significant degeneration-dependent differences and correlations with the exception of severe end-stage degeneration and were of distinct diagnostic value in the assessment of surface integrity. None of the 3D

  17. XML3D and Xflow: combining declarative 3D for the Web with generic data flows.

    Klein, Felix; Sons, Kristian; Rubinstein, Dmitri; Slusallek, Philipp

    2013-01-01

    Researchers have combined XML3D, which provides declarative, interactive 3D scene descriptions based on HTML5, with Xflow, a language for declarative, high-performance data processing. The result lets Web developers combine a 3D scene graph with data flows for dynamic meshes, animations, image processing, and postprocessing. PMID:24808080

  18. Dynamic analysis of radial force density in brushless DC motor using 3-D equivalent magnetic circuit network method

    Hur, J.; Chun, Y.D.; Lee, J.; Hyun, D.S. [Hanyang Univ., Seoul (Korea, Republic of). Dept. of Electrical Engineering

    1998-09-01

    The distribution of radial force density in brushless permanent magnet DC motor is not uniform in axial direction. The analysis of radial force density has to consider the 3-D shape of teeth and overhand, because the radial force density causes vibration and acts on the surface of teeth inconstantly. For the analysis, a new 3-D equivalent magnetic circuit network method is used to account the rotor movement without remesh. The radial force density is calculated and analyzed by Maxwell stress tensor and discrete Fourier transform (DFT) respectively. The results of 3-D equivalent magnetic circuit method have been compared with the results of 3-D FEM.

  19. Interdisciplinary Collaboration through Designing 3D Simulation Case Studies

    Bai, Xin; 10.5121/ijma.2011.3109

    2011-01-01

    Interdisciplinary collaboration is essential for the advance of research. As domain subjects become more and more specialized, researchers need to cross disciplines for insights from peers in other areas to have a broader and deeper understand of a topic at micro- and macro-levels. We developed a 3D virtual learning environment that served as a platform for faculty to plan curriculum, share educational beliefs, and conduct cross-discipline research for effective learning. Based upon the scripts designed by faculty from five disciplines, virtual doctors, nurses, or patients interact in a 3D virtual hospital. The teaching vignettes were then converted to video clips, allowing users to view, pause, replay, or comment on the videos individually or in groups. Unlike many existing platforms, we anticipated a value-added by adding a social networking capacity to this virtual environment. The focus of this paper is on the cost-efficiency and system design of the virtual learning environment.

  20. Advanced computational tools for 3-D seismic analysis

    Barhen, J.; Glover, C.W.; Protopopescu, V.A. [Oak Ridge National Lab., TN (United States)] [and others

    1996-06-01

    The global objective of this effort is to develop advanced computational tools for 3-D seismic analysis, and test the products using a model dataset developed under the joint aegis of the United States` Society of Exploration Geophysicists (SEG) and the European Association of Exploration Geophysicists (EAEG). The goal is to enhance the value to the oil industry of the SEG/EAEG modeling project, carried out with US Department of Energy (DOE) funding in FY` 93-95. The primary objective of the ORNL Center for Engineering Systems Advanced Research (CESAR) is to spearhead the computational innovations techniques that would enable a revolutionary advance in 3-D seismic analysis. The CESAR effort is carried out in collaboration with world-class domain experts from leading universities, and in close coordination with other national laboratories and oil industry partners.